Escript  Revision_4320
Public Types | Public Member Functions | Static Public Attributes | Private Member Functions | Private Attributes | Static Private Attributes | Friends | List of all members
finley::MeshAdapter Class Reference

implements the AbstractContinuousDomain interface for the Finley library. More...

#include <MeshAdapter.h>

Inheritance diagram for finley::MeshAdapter:
escript::AbstractContinuousDomain escript::AbstractDomain

Public Types

typedef std::map< int,
std::string > 
FunctionSpaceNamesMapType

Public Member Functions

 MeshAdapter (Finley_Mesh *finleyMesh=0)
 Constructor for MeshAdapter.
 MeshAdapter (const MeshAdapter &in)
 Copy constructor.
 ~MeshAdapter ()
 Destructor for MeshAdapter. As specified in the constructor this calls Finley_Mesh_free for the pointer given to the constructor.
virtual int getMPISize () const
 return the number of processors used for this domain
virtual int getMPIRank () const
 return the number MPI rank of this processor
virtual void MPIBarrier () const
 If compiled for MPI then execute an MPI_Barrier, else do nothing.
virtual bool onMasterProcessor () const
 Return true if on MPI processor 0, else false.
unsigned int getMPIComm () const
 get the communicator for this domain. Returns 0 on non-MPI builds Routine must be implemented by the DomainAdapter
void write (const std::string &fileName) const
 Write the current mesh to a file with the given name.
void Print_Mesh_Info (const bool full=false) const
void dump (const std::string &fileName) const
 dumps the mesh to a file with the given name.
Finley_MeshgetFinley_Mesh () const
 return the pointer to the underlying finley mesh structure
int getTagFromSampleNo (int functionSpaceType, int sampleNo) const
 Return the tag key for the given sample number.
const int * borrowSampleReferenceIDs (int functionSpaceType) const
 Return the reference number of the given sample number.
virtual bool isValidFunctionSpaceType (int functionSpaceType) const
 Returns true if the given integer is a valid function space type for this domain.
virtual std::string getDescription () const
 Return a description for this domain.
virtual std::string functionSpaceTypeAsString (int functionSpaceType) const
 Return a description for the given function space type code.
void setFunctionSpaceTypeNames ()
 Build the table of function space type names.
virtual int getContinuousFunctionCode () const
 Return a continuous FunctionSpace code.
virtual int getReducedContinuousFunctionCode () const
 Return a continuous on reduced order nodes FunctionSpace code.
virtual int getFunctionCode () const
 Return a function FunctionSpace code.
virtual int getReducedFunctionCode () const
 Return a function with reduced integration order FunctionSpace code.
virtual int getFunctionOnBoundaryCode () const
 Return a function on boundary FunctionSpace code.
virtual int getReducedFunctionOnBoundaryCode () const
 Return a function on boundary with reduced integration order FunctionSpace code.
virtual int getFunctionOnContactZeroCode () const
 Return a FunctionOnContactZero code.
virtual int getReducedFunctionOnContactZeroCode () const
 Return a FunctionOnContactZero code with reduced integration order.
virtual int getFunctionOnContactOneCode () const
 Return a FunctionOnContactOne code.
virtual int getReducedFunctionOnContactOneCode () const
 Return a FunctionOnContactOne code with reduced integration order.
virtual int getSolutionCode () const
 Return a Solution code.
virtual int getReducedSolutionCode () const
 Return a ReducedSolution code.
virtual int getDiracDeltaFunctionsCode () const
 Return a DiracDeltaFunctions code.
virtual int getDim () const
 Returns the spatial dimension of the domain.
virtual StatusType getStatus () const
 Returns a status indicator of the domain. The status identifier should be unique over the live time if the object but may be updated if changes to the domain happen, e.g. modifications to its geometry.
virtual int getNumDataPointsGlobal () const
 Return the number of data points summed across all MPI processes.
virtual std::pair< int, int > getDataShape (int functionSpaceCode) const
 Return the number of data points per sample, and the number of samples as a pair.
virtual void setToX (escript::Data &arg) const
 copies the location of data points into arg. The domain of arg has to match this. has to be implemented by the actual Domain adapter.
virtual void setTagMap (const std::string &name, int tag)
 sets a map from a clear tag name to a tag key
virtual int getTag (const std::string &name) const
 Return the tag key for tag name.
virtual bool isValidTagName (const std::string &name) const
 Returns true if name is a defined tage name.
virtual std::string showTagNames () const
 Returns all tag names in a single string sperated by commas.
virtual void setNewX (const escript::Data &arg)
 assigns new location to the domain
virtual void interpolateOnDomain (escript::Data &target, const escript::Data &source) const
 interpolates data given on source onto target where source and target have to be given on the same domain.
virtual bool probeInterpolationOnDomain (int functionSpaceType_source, int functionSpaceType_target) const
 True if interpolation is possible from source to target.
virtual signed char preferredInterpolationOnDomain (int functionSpaceType_source, int functionSpaceType_target) const
 Preferred direction of interpolation.
bool commonFunctionSpace (const std::vector< int > &fs, int &resultcode) const
 given a vector of FunctionSpace typecodes, pass back a code which then can all be interpolated to.
virtual void interpolateACross (escript::Data &target, const escript::Data &source) const
 interpolates data given on source onto target where source and target are given on different domains. has to be implemented by the actual Domain adapter.
virtual bool probeInterpolationACross (int functionSpaceType_source, const escript::AbstractDomain &targetDomain, int functionSpaceType_target) const
 determines whether interpolation from source to target is possible. Must be implemented by the actual Domain adapter
virtual void setToNormal (escript::Data &out) const
 copies the surface normals at data points into out. The actual function space to be considered is defined by out. out has to be defined on this.
virtual void setToSize (escript::Data &out) const
 copies the size of samples into out. The actual function space to be considered is defined by out. out has to be defined on this.
virtual void setToGradient (escript::Data &grad, const escript::Data &arg) const
 copies the gradient of arg into grad. The actual function space to be considered for the gradient is defined by grad. arg and grad have to be defined on this.
virtual void setToIntegrals (std::vector< double > &integrals, const escript::Data &arg) const
 copies the integrals of the function defined by arg into integrals. arg has to be defined on this.
virtual int getSystemMatrixTypeId (const int solver, const int preconditioner, const int package, const bool symmetry) const
 return the identifier of the matrix type to be used for the global stiffness matrix when a particular solver, package, perconditioner, and symmetric matrix is used.
virtual int getTransportTypeId (const int solver, const int preconditioner, const int package, const bool symmetry) const
 return the identifier of the transport problem type to be used when a particular solver, perconditioner, package and symmetric matrix is used.
virtual bool isCellOriented (int functionSpaceCode) const
 returns true if data on this domain and a function space of type functionSpaceCode has to considered as cell centered data.
virtual bool ownSample (int fs_code, index_t id) const
 True if this rank owns the sample(id) Must be implemented by the Domain adapter.
virtual void addPDEToSystem (escript::AbstractSystemMatrix &mat, escript::Data &rhs, const escript::Data &A, const escript::Data &B, const escript::Data &C, const escript::Data &D, const escript::Data &X, const escript::Data &Y, const escript::Data &d, const escript::Data &y, const escript::Data &d_contact, const escript::Data &y_contact, const escript::Data &d_dirac, const escript::Data &y_dirac) const
 returns the function space representation of the type functionSpaceCode on this domain as a vtkObject.
virtual void addPDEToLumpedSystem (escript::Data &mat, const escript::Data &D, const escript::Data &d, const escript::Data &d_dirac, const bool useHRZ) const
 adds a PDE onto the lumped stiffness matrix matrix
virtual void addPDEToRHS (escript::Data &rhs, const escript::Data &X, const escript::Data &Y, const escript::Data &y, const escript::Data &y_contact, const escript::Data &y_dirac) const
 adds a PDE onto the stiffness matrix mat and a rhs
virtual void addPDEToTransportProblem (escript::AbstractTransportProblem &tp, escript::Data &source, const escript::Data &M, const escript::Data &A, const escript::Data &B, const escript::Data &C, const escript::Data &D, const escript::Data &X, const escript::Data &Y, const escript::Data &d, const escript::Data &y, const escript::Data &d_contact, const escript::Data &y_contact, const escript::Data &d_dirac, const escript::Data &y_dirac) const
 adds a PDE onto a transport problem
escript::ASM_ptr newSystemMatrix (const int row_blocksize, const escript::FunctionSpace &row_functionspace, const int column_blocksize, const escript::FunctionSpace &column_functionspace, const int type) const
 creates a SystemMatrixAdapter stiffness matrix and initializes it with zeros:
escript::ATP_ptr newTransportProblem (const int blocksize, const escript::FunctionSpace &functionspace, const int type) const
 creates a TransportProblemAdapter
virtual escript::Data getX () const
 returns locations in the FEM nodes
virtual escript::Data getNormal () const
 return boundary normals at the quadrature point on the face elements
virtual escript::Data getSize () const
 returns the element size
virtual bool operator== (const escript::AbstractDomain &other) const
 comparison operators
virtual bool operator!= (const escript::AbstractDomain &other) const
virtual void setTags (const int functionSpaceType, const int newTag, const escript::Data &mask) const
 assigns new tag newTag to all samples of functionspace with a positive value of mask for any its sample point.
virtual int getNumberOfTagsInUse (int functionSpaceCode) const
 return the number of tags in use and a pointer to an array with the number of tags in use
virtual const int * borrowListOfTagsInUse (int functionSpaceCode) const
virtual bool canTag (int functionSpaceCode) const
 Checks if this domain allows tags for the specified functionSpaceCode.
virtual int getApproximationOrder (const int functionSpaceCode) const
 returns the approximation order used for a function space functionSpaceCode
bool supportsContactElements () const
- Public Member Functions inherited from escript::AbstractContinuousDomain
 AbstractContinuousDomain ()
 Default constructor for AbstractContinuousDomain.
virtual ~AbstractContinuousDomain ()
 Destructor for AbstractContinuousDomain.
- Public Member Functions inherited from escript::AbstractDomain
Domain_ptr getPtr ()
 Returns smart pointer which is managing this object. If one does not exist yet it creates one.
const_Domain_ptr getPtr () const
 AbstractDomain ()
 Default constructor for AbstractDomain.
virtual ~AbstractDomain ()
 Destructor for AbstractDomain.
void throwStandardException (const std::string &functionName) const
 Throw a standard exception. This function is called if any attempt is made to use a base class function.

Static Public Attributes

static const int DegreesOfFreedom = FINLEY_DEGREES_OF_FREEDOM
static const int ReducedDegreesOfFreedom = FINLEY_REDUCED_DEGREES_OF_FREEDOM
static const int Nodes = FINLEY_NODES
static const int ReducedNodes = FINLEY_REDUCED_NODES
static const int Elements = FINLEY_ELEMENTS
static const int ReducedElements = FINLEY_REDUCED_ELEMENTS
static const int FaceElements = FINLEY_FACE_ELEMENTS
static const int ReducedFaceElements = FINLEY_REDUCED_FACE_ELEMENTS
static const int Points = FINLEY_POINTS
static const int ContactElementsZero = FINLEY_CONTACT_ELEMENTS_1
static const int ReducedContactElementsZero = FINLEY_REDUCED_CONTACT_ELEMENTS_1
static const int ContactElementsOne = FINLEY_CONTACT_ELEMENTS_2
static const int ReducedContactElementsOne = FINLEY_REDUCED_CONTACT_ELEMENTS_2

Private Member Functions

void addDiracPoints (const std::vector< double > &points, const std::vector< int > &tags) const
 adds points to support more Dirac delta function.
void extractArgsFromDict (const boost::python::dict &arg, int &numData, char **&names, escriptDataC *&data, escriptDataC **&dataPtr) const
boost::shared_ptr< Finley_MeshgetMesh ()

Private Attributes

boost::shared_ptr< Finley_Meshm_finleyMesh

Static Private Attributes

static FunctionSpaceNamesMapType m_functionSpaceTypeNames

Friends

escript::Domain_ptr finley::brick (int n0, int n1, int n2, int order, double l0, double l1, double l2, int periodic0, int periodic1, int periodic2, int integrationOrder, int reducedIntegrationOrder, int useElementsOnFace, int useFullElementOrder, int optimize, const std::vector< double > &points, const std::vector< int > &tags, const std::map< std::string, int > &tagnamestonums)
escript::Domain_ptr finley::rectangle (int n0, int n1, int order, double l0, double l1, int periodic0, int periodic1, int integrationOrder, int reducedIntegrationOrder, int useElementsOnFace, int useFullElementOrder, int optimize, const std::vector< double > &points, const std::vector< int > &tags, const std::map< std::string, int > &tagnamestonums)

Detailed Description

implements the AbstractContinuousDomain interface for the Finley library.

Member Typedef Documentation

typedef std::map<int, std::string> finley::MeshAdapter::FunctionSpaceNamesMapType

5B

Constructor & Destructor Documentation

finley::MeshAdapter::MeshAdapter ( Finley_Mesh finleyMesh = 0)

Constructor for MeshAdapter.

Description: Constructor for MeshAdapter. The pointer passed to MeshAdapter is deleted using a call to Finley_Mesh_free in the MeshAdapter destructor.

Throws: May throw an exception derived from EsysException

Parameters
finleyMeshInput - A pointer to the externally constructed finley mesh.The pointer passed to MeshAdapter is deleted using a call to Finley_Mesh_free in the MeshAdapter destructor.
finley::MeshAdapter::MeshAdapter ( const MeshAdapter in)

Copy constructor.

References setFunctionSpaceTypeNames().

finley::MeshAdapter::~MeshAdapter ( )

Destructor for MeshAdapter. As specified in the constructor this calls Finley_Mesh_free for the pointer given to the constructor.

References Finley_Mesh_free(), and m_finleyMesh.

Member Function Documentation

void finley::MeshAdapter::addDiracPoints ( const std::vector< double > &  points,
const std::vector< int > &  tags 
) const
private

adds points to support more Dirac delta function.

Do NOT call these at any time other than construction! Using them later creates consistancy problems

References finley::checkFinleyError(), Finley_Mesh_addPoints(), getDim(), m_finleyMesh, TMPMEMALLOC, and TMPMEMFREE.

Referenced by finley::brick(), and finley::rectangle().

void finley::MeshAdapter::addPDEToLumpedSystem ( escript::Data mat,
const escript::Data D,
const escript::Data d,
const escript::Data d_dirac,
const bool  useHRZ 
) const
virtual
void finley::MeshAdapter::addPDEToRHS ( escript::Data rhs,
const escript::Data X,
const escript::Data Y,
const escript::Data y,
const escript::Data y_contact,
const escript::Data y_dirac 
) const
virtual
void finley::MeshAdapter::addPDEToSystem ( escript::AbstractSystemMatrix mat,
escript::Data rhs,
const escript::Data A,
const escript::Data B,
const escript::Data C,
const escript::Data D,
const escript::Data X,
const escript::Data Y,
const escript::Data d,
const escript::Data y,
const escript::Data d_contact,
const escript::Data y_contact,
const escript::Data d_dirac,
const escript::Data y_dirac 
) const
virtual

returns the function space representation of the type functionSpaceCode on this domain as a vtkObject.

adds a PDE onto the stiffness matrix mat and a rhs

Reimplemented from escript::AbstractContinuousDomain.

References finley::checkFinleyError(), Finley_Mesh::ContactElements, Finley_Mesh::Elements, Finley_Mesh::FaceElements, Finley_Assemble_PDE(), escript::Data::getDataC(), paso::SystemMatrixAdapter::getPaso_SystemMatrix(), m_finleyMesh, Finley_Mesh::Nodes, and Finley_Mesh::Points.

Referenced by BOOST_PYTHON_MODULE().

void finley::MeshAdapter::addPDEToTransportProblem ( escript::AbstractTransportProblem tp,
escript::Data source,
const escript::Data M,
const escript::Data A,
const escript::Data B,
const escript::Data C,
const escript::Data D,
const escript::Data X,
const escript::Data Y,
const escript::Data d,
const escript::Data y,
const escript::Data d_contact,
const escript::Data y_contact,
const escript::Data d_dirac,
const escript::Data y_dirac 
) const
virtual
const int * finley::MeshAdapter::borrowListOfTagsInUse ( int  functionSpaceCode) const
virtual
const int * finley::MeshAdapter::borrowSampleReferenceIDs ( int  functionSpaceType) const
virtual
bool finley::MeshAdapter::canTag ( int  functionSpaceCode) const
virtual
bool finley::MeshAdapter::commonFunctionSpace ( const std::vector< int > &  fs,
int &  resultcode 
) const
virtual

given a vector of FunctionSpace typecodes, pass back a code which then can all be interpolated to.

Returns
true is result is valid, false if not

Reimplemented from escript::AbstractDomain.

References ContactElementsOne, ContactElementsZero, DegreesOfFreedom, Elements, FaceElements, Nodes, Points, ReducedContactElementsOne, ReducedContactElementsZero, ReducedDegreesOfFreedom, ReducedElements, ReducedFaceElements, and ReducedNodes.

void finley::MeshAdapter::dump ( const std::string &  fileName) const
virtual
void finley::MeshAdapter::extractArgsFromDict ( const boost::python::dict &  arg,
int &  numData,
char **&  names,
escriptDataC *&  data,
escriptDataC **&  dataPtr 
) const
private
string finley::MeshAdapter::functionSpaceTypeAsString ( int  functionSpaceType) const
virtual

Return a description for the given function space type code.

Reimplemented from escript::AbstractDomain.

References m_functionSpaceTypeNames.

int finley::MeshAdapter::getApproximationOrder ( const int  functionSpaceCode) const
virtual
int finley::MeshAdapter::getContinuousFunctionCode ( ) const
virtual

Return a continuous FunctionSpace code.

Reimplemented from escript::AbstractContinuousDomain.

References Nodes.

pair< int, int > finley::MeshAdapter::getDataShape ( int  functionSpaceCode) const
virtual
string finley::MeshAdapter::getDescription ( ) const
virtual

Return a description for this domain.

Reimplemented from escript::AbstractContinuousDomain.

Referenced by BOOST_PYTHON_MODULE(), borrowSampleReferenceIDs(), getDataShape(), and getTagFromSampleNo().

int finley::MeshAdapter::getDim ( ) const
virtual

Returns the spatial dimension of the domain.

This has to be implemented by the actual Domain adapter.

Reimplemented from escript::AbstractDomain.

References finley::checkFinleyError(), Finley_Mesh_getDim(), and m_finleyMesh.

Referenced by addDiracPoints(), and BOOST_PYTHON_MODULE().

int finley::MeshAdapter::getDiracDeltaFunctionsCode ( ) const
virtual

Return a DiracDeltaFunctions code.

Reimplemented from escript::AbstractContinuousDomain.

References Points.

Finley_Mesh * finley::MeshAdapter::getFinley_Mesh ( ) const

return the pointer to the underlying finley mesh structure

References m_finleyMesh.

Referenced by finley::glueFaces(), finley::joinFaces(), newSystemMatrix(), and newTransportProblem().

int finley::MeshAdapter::getFunctionCode ( ) const
virtual

Return a function FunctionSpace code.

Reimplemented from escript::AbstractContinuousDomain.

References Elements.

int finley::MeshAdapter::getFunctionOnBoundaryCode ( ) const
virtual

Return a function on boundary FunctionSpace code.

Reimplemented from escript::AbstractContinuousDomain.

References FaceElements.

int finley::MeshAdapter::getFunctionOnContactOneCode ( ) const
virtual

Return a FunctionOnContactOne code.

Reimplemented from escript::AbstractContinuousDomain.

References ContactElementsOne.

int finley::MeshAdapter::getFunctionOnContactZeroCode ( ) const
virtual

Return a FunctionOnContactZero code.

Reimplemented from escript::AbstractContinuousDomain.

References ContactElementsZero.

boost::shared_ptr<Finley_Mesh> finley::MeshAdapter::getMesh ( )
inlineprivate

References m_finleyMesh.

Referenced by finley::brick(), and finley::rectangle().

unsigned int finley::MeshAdapter::getMPIComm ( ) const
virtual

get the communicator for this domain. Returns 0 on non-MPI builds Routine must be implemented by the DomainAdapter

Reimplemented from escript::AbstractDomain.

References m_finleyMesh.

int finley::MeshAdapter::getMPIRank ( ) const
virtual

return the number MPI rank of this processor

Reimplemented from escript::AbstractDomain.

References m_finleyMesh.

Referenced by BOOST_PYTHON_MODULE().

int finley::MeshAdapter::getMPISize ( ) const
virtual

return the number of processors used for this domain

Reimplemented from escript::AbstractDomain.

References m_finleyMesh.

Referenced by BOOST_PYTHON_MODULE(), interpolateOnDomain(), ownSample(), and setToGradient().

escript::Data finley::MeshAdapter::getNormal ( ) const
virtual

return boundary normals at the quadrature point on the face elements

Reimplemented from escript::AbstractDomain.

References escript::functionOnBoundary(), and escript::FunctionSpace::getNormal().

Referenced by BOOST_PYTHON_MODULE().

int finley::MeshAdapter::getNumberOfTagsInUse ( int  functionSpaceCode) const
virtual
int finley::MeshAdapter::getNumDataPointsGlobal ( ) const
virtual

Return the number of data points summed across all MPI processes.

Reimplemented from escript::AbstractContinuousDomain.

References Finley_NodeFile_getGlobalNumNodes(), and m_finleyMesh.

Referenced by BOOST_PYTHON_MODULE().

int finley::MeshAdapter::getReducedContinuousFunctionCode ( ) const
virtual

Return a continuous on reduced order nodes FunctionSpace code.

Reimplemented from escript::AbstractContinuousDomain.

References ReducedNodes.

int finley::MeshAdapter::getReducedFunctionCode ( ) const
virtual

Return a function with reduced integration order FunctionSpace code.

Reimplemented from escript::AbstractContinuousDomain.

References ReducedElements.

int finley::MeshAdapter::getReducedFunctionOnBoundaryCode ( ) const
virtual

Return a function on boundary with reduced integration order FunctionSpace code.

Reimplemented from escript::AbstractContinuousDomain.

References ReducedFaceElements.

int finley::MeshAdapter::getReducedFunctionOnContactOneCode ( ) const
virtual

Return a FunctionOnContactOne code with reduced integration order.

Reimplemented from escript::AbstractContinuousDomain.

References ReducedContactElementsOne.

int finley::MeshAdapter::getReducedFunctionOnContactZeroCode ( ) const
virtual

Return a FunctionOnContactZero code with reduced integration order.

Reimplemented from escript::AbstractContinuousDomain.

References ReducedContactElementsZero.

int finley::MeshAdapter::getReducedSolutionCode ( ) const
virtual

Return a ReducedSolution code.

Reimplemented from escript::AbstractContinuousDomain.

References ReducedDegreesOfFreedom.

escript::Data finley::MeshAdapter::getSize ( ) const
virtual

returns the element size

Reimplemented from escript::AbstractDomain.

References escript::function(), and escript::FunctionSpace::getSize().

Referenced by BOOST_PYTHON_MODULE().

int finley::MeshAdapter::getSolutionCode ( ) const
virtual

Return a Solution code.

Reimplemented from escript::AbstractContinuousDomain.

References DegreesOfFreedom.

AbstractDomain::StatusType finley::MeshAdapter::getStatus ( ) const
virtual

Returns a status indicator of the domain. The status identifier should be unique over the live time if the object but may be updated if changes to the domain happen, e.g. modifications to its geometry.

This has to be implemented by the actual Domain adapter.

Reimplemented from escript::AbstractDomain.

References Finley_Mesh_getStatus(), and m_finleyMesh.

int finley::MeshAdapter::getSystemMatrixTypeId ( const int  solver,
const int  preconditioner,
const int  package,
const bool  symmetry 
) const
virtual

return the identifier of the matrix type to be used for the global stiffness matrix when a particular solver, package, perconditioner, and symmetric matrix is used.

Parameters
solver
preconditioner
package
symmetry

Reimplemented from escript::AbstractContinuousDomain.

References m_finleyMesh, and Finley_Mesh::MPIInfo.

Referenced by BOOST_PYTHON_MODULE().

int finley::MeshAdapter::getTag ( const std::string &  name) const
virtual

Return the tag key for tag name.

Parameters
nameInput - tag name

Reimplemented from escript::AbstractDomain.

References finley::checkFinleyError(), Finley_Mesh_getTag(), and m_finleyMesh.

Referenced by BOOST_PYTHON_MODULE().

int finley::MeshAdapter::getTagFromSampleNo ( int  functionSpaceType,
int  sampleNo 
) const
virtual
int finley::MeshAdapter::getTransportTypeId ( const int  solver,
const int  preconditioner,
const int  package,
const bool  symmetry 
) const
virtual

return the identifier of the transport problem type to be used when a particular solver, perconditioner, package and symmetric matrix is used.

Parameters
solver
preconditioner
package
symmetry

Reimplemented from escript::AbstractContinuousDomain.

References m_finleyMesh, and Finley_Mesh::MPIInfo.

Referenced by BOOST_PYTHON_MODULE().

escript::Data finley::MeshAdapter::getX ( ) const
virtual

returns locations in the FEM nodes

Reimplemented from escript::AbstractDomain.

References escript::continuousFunction(), and escript::FunctionSpace::getX().

Referenced by BOOST_PYTHON_MODULE().

void finley::MeshAdapter::interpolateACross ( escript::Data target,
const escript::Data source 
) const
virtual

interpolates data given on source onto target where source and target are given on different domains. has to be implemented by the actual Domain adapter.

Reimplemented from escript::AbstractDomain.

References escript::FunctionSpace::getDomain(), and escript::Data::getFunctionSpace().

void finley::MeshAdapter::interpolateOnDomain ( escript::Data target,
const escript::Data source 
) const
virtual
bool finley::MeshAdapter::isCellOriented ( int  functionSpaceCode) const
virtual

returns true if data on this domain and a function space of type functionSpaceCode has to considered as cell centered data.

Reimplemented from escript::AbstractDomain.

References finley::checkFinleyError(), ContactElementsOne, ContactElementsZero, DegreesOfFreedom, Elements, FaceElements, Nodes, Points, ReducedContactElementsOne, ReducedContactElementsZero, ReducedDegreesOfFreedom, ReducedElements, and ReducedFaceElements.

bool finley::MeshAdapter::isValidFunctionSpaceType ( int  functionSpaceType) const
virtual

Returns true if the given integer is a valid function space type for this domain.

Reimplemented from escript::AbstractContinuousDomain.

References m_functionSpaceTypeNames.

bool finley::MeshAdapter::isValidTagName ( const std::string &  name) const
virtual

Returns true if name is a defined tage name.

Parameters
nameInput - tag name to be checked.

Reimplemented from escript::AbstractDomain.

References Finley_Mesh_isValidTagName(), and m_finleyMesh.

Referenced by BOOST_PYTHON_MODULE().

void finley::MeshAdapter::MPIBarrier ( ) const
virtual

If compiled for MPI then execute an MPI_Barrier, else do nothing.

Reimplemented from escript::AbstractDomain.

References m_finleyMesh.

Referenced by BOOST_PYTHON_MODULE().

ASM_ptr finley::MeshAdapter::newSystemMatrix ( const int  row_blocksize,
const escript::FunctionSpace row_functionspace,
const int  column_blocksize,
const escript::FunctionSpace column_functionspace,
const int  type 
) const
virtual
ATP_ptr finley::MeshAdapter::newTransportProblem ( const int  blocksize,
const escript::FunctionSpace functionspace,
const int  type 
) const
virtual
bool finley::MeshAdapter::onMasterProcessor ( ) const
virtual

Return true if on MPI processor 0, else false.

Reimplemented from escript::AbstractDomain.

References m_finleyMesh.

Referenced by BOOST_PYTHON_MODULE().

bool finley::MeshAdapter::operator!= ( const escript::AbstractDomain other) const
virtual

Reimplemented from escript::AbstractDomain.

References operator==().

bool finley::MeshAdapter::operator== ( const escript::AbstractDomain other) const
virtual

comparison operators

Reimplemented from escript::AbstractDomain.

References m_finleyMesh.

Referenced by operator!=().

bool finley::MeshAdapter::ownSample ( int  fs_code,
index_t  id 
) const
virtual

True if this rank owns the sample(id) Must be implemented by the Domain adapter.

Reimplemented from escript::AbstractDomain.

References Finley_NodeFile_borrowGlobalNodesIndex(), Finley_NodeFile_getFirstNode(), Finley_NodeFile_getLastNode(), FINLEY_NODES, getMPISize(), m_finleyMesh, and Finley_Mesh::Nodes.

signed char finley::MeshAdapter::preferredInterpolationOnDomain ( int  functionSpaceType_source,
int  functionSpaceType_target 
) const
virtual

Preferred direction of interpolation.

If you really need to test for a particular direction, then use probeInterpolation.

Returns
0 for not possible, 1 for possible and preferred, -1 other direction preferred (does not mean this direction is possible)

Reimplemented from escript::AbstractDomain.

References probeInterpolationOnDomain().

void finley::MeshAdapter::Print_Mesh_Info ( const bool  full = false) const
virtual
Parameters
full

Reimplemented from escript::AbstractContinuousDomain.

References Finley_PrintMesh_Info(), and m_finleyMesh.

Referenced by BOOST_PYTHON_MODULE().

bool finley::MeshAdapter::probeInterpolationACross ( int  functionSpaceType_source,
const escript::AbstractDomain targetDomain,
int  functionSpaceType_target 
) const
virtual

determines whether interpolation from source to target is possible. Must be implemented by the actual Domain adapter

Reimplemented from escript::AbstractDomain.

bool finley::MeshAdapter::probeInterpolationOnDomain ( int  functionSpaceType_source,
int  functionSpaceType_target 
) const
virtual
void finley::MeshAdapter::setFunctionSpaceTypeNames ( )
void finley::MeshAdapter::setNewX ( const escript::Data arg)
virtual
void finley::MeshAdapter::setTagMap ( const std::string &  name,
int  tag 
)
virtual

sets a map from a clear tag name to a tag key

Parameters
nameInput - tag name.
tagInput - tag key.

Reimplemented from escript::AbstractDomain.

References finley::checkFinleyError(), Finley_Mesh_addTagMap(), and m_finleyMesh.

Referenced by BOOST_PYTHON_MODULE().

void finley::MeshAdapter::setTags ( const int  functionSpaceType,
const int  newTag,
const escript::Data mask 
) const
virtual
void finley::MeshAdapter::setToGradient ( escript::Data grad,
const escript::Data arg 
) const
virtual
void finley::MeshAdapter::setToIntegrals ( std::vector< double > &  integrals,
const escript::Data arg 
) const
virtual
void finley::MeshAdapter::setToNormal ( escript::Data out) const
virtual
void finley::MeshAdapter::setToSize ( escript::Data out) const
virtual
void finley::MeshAdapter::setToX ( escript::Data arg) const
virtual
string finley::MeshAdapter::showTagNames ( ) const
virtual

Returns all tag names in a single string sperated by commas.

Reimplemented from escript::AbstractDomain.

References m_finleyMesh, Finley_TagMap::name, Finley_TagMap::next, and Finley_Mesh::TagMap.

Referenced by BOOST_PYTHON_MODULE().

bool finley::MeshAdapter::supportsContactElements ( ) const
virtual

Reimplemented from escript::AbstractDomain.

void finley::MeshAdapter::write ( const std::string &  fileName) const
virtual

Write the current mesh to a file with the given name.

Parameters
fileNameInput - The name of the file to write to.

Reimplemented from escript::AbstractDomain.

References finley::checkFinleyError(), Finley_Mesh_write(), m_finleyMesh, TMPMEMALLOC, and TMPMEMFREE.

Referenced by BOOST_PYTHON_MODULE().

Friends And Related Function Documentation

escript::Domain_ptr finley::brick ( int  n0,
int  n1,
int  n2,
int  order,
double  l0,
double  l1,
double  l2,
int  periodic0,
int  periodic1,
int  periodic2,
int  integrationOrder,
int  reducedIntegrationOrder,
int  useElementsOnFace,
int  useFullElementOrder,
int  optimize,
const std::vector< double > &  points,
const std::vector< int > &  tags,
const std::map< std::string, int > &  tagnamestonums 
)
friend
escript::Domain_ptr finley::rectangle ( int  n0,
int  n1,
int  order,
double  l0,
double  l1,
int  periodic0,
int  periodic1,
int  integrationOrder,
int  reducedIntegrationOrder,
int  useElementsOnFace,
int  useFullElementOrder,
int  optimize,
const std::vector< double > &  points,
const std::vector< int > &  tags,
const std::map< std::string, int > &  tagnamestonums 
)
friend

Member Data Documentation

const int finley::MeshAdapter::ContactElementsOne = FINLEY_CONTACT_ELEMENTS_2
static
const int finley::MeshAdapter::ContactElementsZero = FINLEY_CONTACT_ELEMENTS_1
static
const int finley::MeshAdapter::DegreesOfFreedom = FINLEY_DEGREES_OF_FREEDOM
static
const int finley::MeshAdapter::Elements = FINLEY_ELEMENTS
static
const int finley::MeshAdapter::FaceElements = FINLEY_FACE_ELEMENTS
static
boost::shared_ptr<Finley_Mesh> finley::MeshAdapter::m_finleyMesh
private
MeshAdapter::FunctionSpaceNamesMapType finley::MeshAdapter::m_functionSpaceTypeNames
staticprivate
const int finley::MeshAdapter::Nodes = FINLEY_NODES
static
const int finley::MeshAdapter::Points = FINLEY_POINTS
static
const int finley::MeshAdapter::ReducedContactElementsOne = FINLEY_REDUCED_CONTACT_ELEMENTS_2
static
const int finley::MeshAdapter::ReducedContactElementsZero = FINLEY_REDUCED_CONTACT_ELEMENTS_1
static
const int finley::MeshAdapter::ReducedDegreesOfFreedom = FINLEY_REDUCED_DEGREES_OF_FREEDOM
static
const int finley::MeshAdapter::ReducedElements = FINLEY_REDUCED_ELEMENTS
static
const int finley::MeshAdapter::ReducedFaceElements = FINLEY_REDUCED_FACE_ELEMENTS
static
const int finley::MeshAdapter::ReducedNodes = FINLEY_REDUCED_NODES
static

The documentation for this class was generated from the following files: