escript
Revision_4925
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RipleyDomain extends the AbstractContinuousDomain interface for the Ripley library and is the base class for Rectangle and Brick. More...
#include <RipleyDomain.h>
Public Member Functions | |
RipleyDomain (dim_t dim) | |
Constructor with number of dimensions. Allocates MPI info structure. More... | |
~RipleyDomain () | |
Destructor. More... | |
virtual int | getMPISize () const |
returns the number of processors used for this domain More... | |
virtual int | getMPIRank () const |
returns the MPI rank of this processor More... | |
virtual void | MPIBarrier () const |
if compiled for MPI then executes an MPI_Barrier, else does nothing More... | |
virtual bool | onMasterProcessor () const |
returns true if on MPI processor 0, else false More... | |
unsigned int | getMPIComm () const |
returns the MPI communicator More... | |
virtual bool | isValidFunctionSpaceType (int fsType) const |
returns true if the argument is a valid function space type for this domain More... | |
virtual std::string | functionSpaceTypeAsString (int fsType) const |
returns a description for the given function space type code More... | |
virtual int | getDim () const |
returns the number of spatial dimensions of the domain More... | |
virtual bool | operator== (const escript::AbstractDomain &other) const |
equality operator More... | |
virtual bool | operator!= (const escript::AbstractDomain &other) const |
inequality operator More... | |
virtual std::pair< int, int > | getDataShape (int fsType) const |
returns the number of data points per sample, and the number of samples as a pair. More... | |
int | getTagFromSampleNo (int fsType, int sampleNo) const |
returns the tag key for the given sample number More... | |
virtual void | setTagMap (const std::string &name, int tag) |
sets a map from a clear tag name to a tag key More... | |
virtual int | getTag (const std::string &name) const |
returns the tag key for tag name More... | |
virtual bool | isValidTagName (const std::string &name) const |
returns true if name is a defined tag name More... | |
virtual std::string | showTagNames () const |
returns all tag names in a single string separated by commas More... | |
virtual void | setNewX (const escript::Data &arg) |
assigns new location to the domain. More... | |
virtual void | interpolateOnDomain (escript::Data &target, const escript::Data &source) const |
interpolates data given on source onto target where source and target have to be given on the same domain More... | |
virtual bool | probeInterpolationOnDomain (int fsType_source, int fsType_target) const |
returns true if data on fsType_source can be interpolated onto fsType_target, false otherwise More... | |
virtual signed char | preferredInterpolationOnDomain (int fsType_source, int fsType_target) const |
Preferred direction of interpolation. More... | |
bool | commonFunctionSpace (const std::vector< int > &fs, int &resultcode) const |
given a vector of FunctionSpace type codes, passes back a code which all can be interpolated to More... | |
virtual void | interpolateACross (escript::Data &target, const escript::Data &source) const |
interpolates data given on source onto target where source and target are given on different domains More... | |
virtual bool | probeInterpolationACross (int, const escript::AbstractDomain &, int) const |
determines whether interpolation from source to target is possible More... | |
virtual escript::Data | getX () const |
returns locations in the FEM nodes More... | |
virtual escript::Data | getNormal () const |
returns boundary normals at the quadrature point on the face elements More... | |
virtual escript::Data | getSize () const |
returns the element size More... | |
virtual void | setToX (escript::Data &arg) const |
copies the location of data points into arg. The domain of arg has to match this domain. More... | |
virtual void | setToGradient (escript::Data &out, const escript::Data &in) const |
copies the gradient of 'in' into 'out'. The actual function space to be considered for the gradient is defined by 'in'. Both arguments have to be defined on this domain. More... | |
virtual void | setTags (const int fsType, const int newTag, const escript::Data &mask) const |
assigns new tag newTag to all samples of given function space with a positive value of mask for any of its sample points More... | |
virtual bool | isCellOriented (int fsType) const |
returns true if data on this domain and given function space type has to be considered as cell centered data More... | |
virtual StatusType | getStatus () const |
returns a status indicator of the domain. The status identifier should be unique over the lifetime of the object but may be updated if changes to the domain happen, e.g. modifications to its geometry. More... | |
virtual int | getNumberOfTagsInUse (int fsType) const |
returns the number of tags in use for a function space type More... | |
virtual const int * | borrowListOfTagsInUse (int fsType) const |
returns a pointer to the list of tags in use for a function space type More... | |
virtual bool | canTag (int fsType) const |
checks if this domain allows tags for the specified function space type More... | |
virtual int | getApproximationOrder (const int fsType) const |
returns the approximation order used for a function space More... | |
virtual bool | supportsContactElements () const |
returns true if this domain supports contact elements, false otherwise More... | |
virtual int | getContinuousFunctionCode () const |
returns a continuous FunctionSpace code More... | |
virtual int | getReducedContinuousFunctionCode () const |
returns a continuous on reduced order nodes FunctionSpace code More... | |
virtual int | getFunctionCode () const |
returns a function FunctionSpace code More... | |
virtual int | getReducedFunctionCode () const |
returns a function with reduced integration order FunctionSpace code More... | |
virtual int | getFunctionOnBoundaryCode () const |
returns a function on boundary FunctionSpace code More... | |
virtual int | getReducedFunctionOnBoundaryCode () const |
returns a function on boundary with reduced integration order FunctionSpace code More... | |
virtual int | getFunctionOnContactZeroCode () const |
return a FunctionOnContactZero code More... | |
virtual int | getReducedFunctionOnContactZeroCode () const |
returns a FunctionOnContactZero code with reduced integration order More... | |
virtual int | getFunctionOnContactOneCode () const |
returns a FunctionOnContactOne code More... | |
virtual int | getReducedFunctionOnContactOneCode () const |
returns a FunctionOnContactOne code with reduced integration order More... | |
virtual int | getSolutionCode () const |
returns a Solution FunctionSpace code More... | |
virtual int | getReducedSolutionCode () const |
returns a ReducedSolution FunctionSpace code More... | |
virtual int | getDiracDeltaFunctionsCode () const |
returns a DiracDeltaFunctions FunctionSpace code More... | |
virtual int | getSystemMatrixTypeId (const int solver, const int preconditioner, const int package, const bool symmetry) const |
returns the identifier of the matrix type to be used for the global stiffness matrix when a particular solver, package, preconditioner, and symmetric matrix is used More... | |
virtual int | getTransportTypeId (const int solver, const int preconditioner, const int package, const bool symmetry) const |
returns the identifier of the transport problem type to be used when a particular solver, preconditioner, package and symmetric matrix is used More... | |
virtual void | setToIntegrals (DoubleVector &integrals, const escript::Data &arg) const |
copies the integrals of the function defined by arg into integrals. arg has to be defined on this domain. More... | |
virtual void | addPDEToSystem (escript::AbstractSystemMatrix &mat, escript::Data &rhs, const escript::Data &A, const escript::Data &B, const escript::Data &C, const escript::Data &D, const escript::Data &X, const escript::Data &Y, const escript::Data &d, const escript::Data &y, const escript::Data &d_contact, const escript::Data &y_contact, const escript::Data &d_dirac, const escript::Data &y_dirac) const |
adds a PDE onto the stiffness matrix mat and rhs More... | |
virtual void | addToSystem (escript::AbstractSystemMatrix &mat, escript::Data &rhs, std::map< std::string, escript::Data > data) const |
adds a PDE onto the stiffness matrix mat and rhs, used for custom solvers with varying arguments counts and so on More... | |
virtual void | addToSystemFromPython (escript::AbstractSystemMatrix &mat, escript::Data &rhs, boost::python::list data) const |
a wrapper for addToSystem that allows calling from Python More... | |
virtual void | addPDEToRHS (escript::Data &rhs, const escript::Data &X, const escript::Data &Y, const escript::Data &y, const escript::Data &y_contact, const escript::Data &y_dirac) const |
adds a PDE onto rhs More... | |
virtual void | addToRHS (escript::Data &rhs, std::map< std::string, escript::Data > data) const |
adds a PDE onto rhs, used for custom solvers with varying arguments counts and so on More... | |
virtual void | addToRHSFromPython (escript::Data &rhs, boost::python::list data) const |
a wrapper for addToRHS that allows calling from Python More... | |
virtual void | addPDEToTransportProblem (escript::AbstractTransportProblem &tp, escript::Data &source, const escript::Data &M, const escript::Data &A, const escript::Data &B, const escript::Data &C, const escript::Data &D, const escript::Data &X, const escript::Data &Y, const escript::Data &d, const escript::Data &y, const escript::Data &d_contact, const escript::Data &y_contact, const escript::Data &d_dirac, const escript::Data &y_dirac) const |
adds a PDE onto a transport problem More... | |
virtual escript::ASM_ptr | newSystemMatrix (const int row_blocksize, const escript::FunctionSpace &row_functionspace, const int column_blocksize, const escript::FunctionSpace &column_functionspace, const int type) const |
creates a stiffness matrix and initializes it with zeros More... | |
virtual escript::ATP_ptr | newTransportProblem (const int blocksize, const escript::FunctionSpace &functionspace, const int type) const |
creates a transport problem More... | |
virtual void | Print_Mesh_Info (const bool full=false) const |
writes information about the mesh to standard output More... | |
virtual std::string | getDescription () const =0 |
writes the current mesh to a file with the given name More... | |
void | dump (const std::string &filename) const =0 |
dumps the mesh to a file with the given name More... | |
const int * | borrowSampleReferenceIDs (int fsType) const =0 |
returns the array of reference numbers for a function space type More... | |
virtual void | setToNormal (escript::Data &out) const =0 |
copies the surface normals at data points into out. The actual function space to be considered is defined by out. out has to be defined on this domain. More... | |
virtual void | setToSize (escript::Data &out) const =0 |
copies the size of samples into out. The actual function space to be considered is defined by out. out has to be defined on this domain. More... | |
virtual void | readNcGrid (escript::Data &out, std::string filename, std::string varname, const ReaderParameters ¶ms) const =0 |
virtual void | readBinaryGrid (escript::Data &out, std::string filename, const ReaderParameters ¶ms) const =0 |
virtual void | writeBinaryGrid (const escript::Data &in, std::string filename, int byteOrder, int dataType) const =0 |
virtual bool | ownSample (int fsType, index_t id) const =0 |
returns true if this rank owns the sample id on given function space More... | |
virtual int | getNumDataPointsGlobal () const =0 |
returns the number of data points summed across all MPI processes More... | |
virtual const int * | getNumNodesPerDim () const =0 |
returns the number of nodes per MPI rank in each dimension More... | |
virtual const int * | getNumElementsPerDim () const =0 |
returns the number of elements per MPI rank in each dimension More... | |
virtual const int * | getNumFacesPerBoundary () const =0 |
returns the number of face elements in the order (left,right,bottom,top,[front,back]) on current MPI rank More... | |
virtual IndexVector | getNodeDistribution () const =0 |
returns the node distribution vector More... | |
virtual const int * | getNumSubdivisionsPerDim () const =0 |
returns the number of spatial subdivisions in each dimension More... | |
virtual double | getLocalCoordinate (int index, int dim) const =0 |
returns the index'th coordinate value in given dimension for this rank More... | |
virtual boost::python::tuple | getGridParameters () const =0 |
returns the tuple (origin, spacing, number_of_elements) More... | |
virtual bool | supportsFilter (const boost::python::tuple &t) const |
true if this domain can handle the specified tuple of filter options. More... | |
virtual void | setAssembler (std::string type, std::map< std::string, escript::Data > options) |
void | setAssemblerFromPython (std::string type, boost::python::list options) |
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AbstractContinuousDomain () | |
Default constructor for AbstractContinuousDomain. More... | |
virtual | ~AbstractContinuousDomain () |
Destructor for AbstractContinuousDomain. More... | |
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Domain_ptr | getPtr () |
Returns smart pointer which is managing this object. If one does not exist yet it creates one. More... | |
const_Domain_ptr | getPtr () const |
AbstractDomain () | |
Default constructor for AbstractDomain. More... | |
virtual | ~AbstractDomain () |
Destructor for AbstractDomain. More... | |
virtual void | write (const std::string &filename) const |
Writes the domain to an external file filename. More... | |
void | throwStandardException (const std::string &functionName) const |
Throw a standard exception. This function is called if any attempt is made to use a base class function. More... | |
virtual escript::Data | randomFill (const DataTypes::ShapeType &shape, const FunctionSpace &what, long seed, const boost::python::tuple &filter) const =0 |
Fills the data object with filtered random values. More... | |
Protected Member Functions | |
void | copyData (escript::Data &out, const escript::Data &in) const |
copies data in 'in' to 'out' (both must be on same function space) More... | |
void | averageData (escript::Data &out, const escript::Data &in) const |
averages data in 'in' to 'out' (from non-reduced to reduced fs) More... | |
void | multiplyData (escript::Data &out, const escript::Data &in) const |
copies data in 'in' to 'out' (from reduced to non-reduced fs) More... | |
void | updateTagsInUse (int fsType) const |
paso::Pattern_ptr | createPasoPattern (const IndexVector &ptr, const IndexVector &index, const dim_t M, const dim_t N) const |
allocates and returns a Paso pattern structure More... | |
paso::Pattern_ptr | createMainPattern () const |
creates the pattern for the main block of the system matrix More... | |
void | createCouplePatterns (const std::vector< IndexVector > &colIndices, const std::vector< IndexVector > &rowIndices, const dim_t N, paso::Pattern_ptr &colPattern, paso::Pattern_ptr &rowPattern) const |
void | addToSystemMatrix (paso::SystemMatrix_ptr in, const IndexVector &nodes_Eq, dim_t num_Eq, const IndexVector &nodes_Sol, dim_t num_Sol, const DoubleVector &array) const |
void | addPoints (int numPoints, const double *points_ptr, const int *tags_ptr) |
virtual dim_t | getNumNodes () const =0 |
returns the number of nodes per MPI rank More... | |
virtual dim_t | getNumElements () const =0 |
returns the number of elements per MPI rank More... | |
virtual dim_t | getNumDOF () const =0 |
returns the number of degrees of freedom per MPI rank More... | |
virtual dim_t | getNumFaceElements () const =0 |
returns the number of face elements on current MPI rank More... | |
virtual dim_t | insertNeighbourNodes (IndexVector &index, index_t node) const =0 |
virtual void | assembleCoordinates (escript::Data &arg) const =0 |
populates the data object 'arg' with the node coordinates More... | |
virtual void | assembleGradient (escript::Data &out, const escript::Data &in) const =0 |
computes the gradient of 'in' and puts the result in 'out' More... | |
virtual void | assembleIntegrate (DoubleVector &integrals, const escript::Data &arg) const =0 |
copies the integrals of the function defined by 'arg' into 'integrals' More... | |
virtual paso::SystemMatrixPattern_ptr | getPattern (bool reducedRowOrder, bool reducedColOrder) const =0 |
returns the Paso system matrix pattern More... | |
virtual void | interpolateNodesOnElements (escript::Data &out, const escript::Data &in, bool reduced) const =0 |
interpolates data on nodes in 'in' onto (reduced) elements in 'out' More... | |
virtual void | interpolateNodesOnFaces (escript::Data &out, const escript::Data &in, bool reduced) const =0 |
interpolates data on nodes in 'in' onto (reduced) face elements in 'out' More... | |
virtual void | nodesToDOF (escript::Data &out, const escript::Data &in) const =0 |
converts data on nodes in 'in' to degrees of freedom in 'out' More... | |
virtual void | dofToNodes (escript::Data &out, const escript::Data &in) const =0 |
converts data on degrees of freedom in 'in' to nodes in 'out' More... | |
virtual int | getDofOfNode (int node) const =0 |
Private Member Functions | |
void | assemblePDE (paso::SystemMatrix_ptr mat, escript::Data &rhs, std::map< std::string, escript::Data > coefs) const |
calls the right PDE assembly routines after performing input checks More... | |
void | assemblePDEBoundary (paso::SystemMatrix_ptr mat, escript::Data &rhs, std::map< std::string, escript::Data > coefs) const |
void | assemblePDEDirac (paso::SystemMatrix_ptr mat, escript::Data &rhs, std::map< std::string, escript::Data > coefs) const |
virtual int | findNode (const double *coords) const =0 |
Additional Inherited Members | |
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typedef int | StatusType |
typedef struct ValueBuffer | ValueBuffer |
typedef std::map< int, ValueBuffer > | BufferMapType |
RipleyDomain extends the AbstractContinuousDomain interface for the Ripley library and is the base class for Rectangle and Brick.
ripley::RipleyDomain::RipleyDomain | ( | dim_t | dim | ) |
Constructor with number of dimensions. Allocates MPI info structure.
References assembler_type, ripley::DEFAULT_ASSEMBLER, Esys_MPIInfo_alloc(), m_mpiInfo, and MPI_COMM_WORLD.
ripley::RipleyDomain::~RipleyDomain | ( | ) |
Destructor.
References Esys_MPIInfo_free(), and m_mpiInfo.
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adds a PDE onto rhs
Reimplemented from escript::AbstractContinuousDomain.
References assemblePDE(), assemblePDEBoundary(), assemblePDEDirac(), and escript::Data::isEmpty().
Referenced by BOOST_PYTHON_MODULE().
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adds a PDE onto the stiffness matrix mat and rhs
Reimplemented from escript::AbstractContinuousDomain.
References assemblePDE(), assemblePDEBoundary(), assemblePDEDirac(), paso::SystemMatrixAdapter::getPaso_SystemMatrix(), escript::Data::isEmpty(), and S.
Referenced by BOOST_PYTHON_MODULE().
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adds a PDE onto a transport problem
Reimplemented from escript::AbstractContinuousDomain.
References assemblePDE(), assemblePDEBoundary(), assemblePDEDirac(), paso::TransportProblemAdapter::getPaso_TransportProblem(), escript::Data::isEmpty(), and paso::M.
Referenced by BOOST_PYTHON_MODULE().
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References borrowSampleReferenceIDs(), findNode(), m_diracPointNodeIDs, m_diracPoints, m_numDim, ripley::DiracPoint::node, ripley::Nodes, and ripley::DiracPoint::tag.
Referenced by ripley::Brick::Brick(), and ripley::Rectangle::Rectangle().
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adds a PDE onto rhs, used for custom solvers with varying arguments counts and so on
References assemblePDE(), assemblePDEBoundary(), assemblePDEDirac(), escript::Data::isEmpty(), and isNotEmpty().
Referenced by addToRHSFromPython().
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a wrapper for addToRHS that allows calling from Python
References addToRHS(), and ripley::tupleListToMap().
Referenced by BOOST_PYTHON_MODULE().
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adds a PDE onto the stiffness matrix mat and rhs, used for custom solvers with varying arguments counts and so on
References assemblePDE(), assemblePDEBoundary(), assemblePDEDirac(), paso::SystemMatrixAdapter::getPaso_SystemMatrix(), isNotEmpty(), and S.
Referenced by addToSystemFromPython().
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a wrapper for addToSystem that allows calling from Python
References addToSystem(), and ripley::tupleListToMap().
Referenced by BOOST_PYTHON_MODULE().
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References MATRIX_FORMAT_CSC, MATRIX_FORMAT_OFFSET1, and UPDATE_BLOCK.
Referenced by ripley::Brick::addToMatrixAndRHS(), ripley::Rectangle::addToMatrixAndRHS(), and assemblePDEDirac().
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populates the data object 'arg' with the node coordinates
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by setToX().
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protectedpure virtual |
computes the gradient of 'in' and puts the result in 'out'
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by setToGradient().
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protectedpure virtual |
copies the integrals of the function defined by 'arg' into 'integrals'
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by setToIntegrals().
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private |
calls the right PDE assembly routines after performing input checks
References ripley::AbstractAssembler::assemblePDESingle(), ripley::AbstractAssembler::assemblePDESingleReduced(), ripley::AbstractAssembler::assemblePDESystem(), ripley::AbstractAssembler::assemblePDESystemReduced(), assembler, ripley::AbstractAssembler::collateFunctionSpaceTypes(), ripley::Elements, escript::Data::getDataPointSize(), escript::Data::isEmpty(), isNotEmpty(), and ripley::ReducedElements.
Referenced by addPDEToRHS(), addPDEToSystem(), addPDEToTransportProblem(), addToRHS(), and addToSystem().
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calls the right PDE boundary assembly routines after performing input checks
References ripley::AbstractAssembler::assemblePDEBoundarySingle(), ripley::AbstractAssembler::assemblePDEBoundarySingleReduced(), ripley::AbstractAssembler::assemblePDEBoundarySystem(), ripley::AbstractAssembler::assemblePDEBoundarySystemReduced(), assembler, ripley::FaceElements, escript::Data::getDataPointSize(), escript::Data::isEmpty(), isNotEmpty(), and ripley::ReducedFaceElements.
Referenced by addPDEToRHS(), addPDEToSystem(), addPDEToTransportProblem(), addToRHS(), and addToSystem().
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References addToSystemMatrix(), escript::Data::getDataPointSize(), getDofOfNode(), getNumDOF(), escript::Data::getSampleDataRO(), escript::Data::getSampleDataRW(), INDEX2, escript::Data::isEmpty(), isNotEmpty(), and m_diracPoints.
Referenced by addPDEToRHS(), addPDEToSystem(), addPDEToTransportProblem(), addToRHS(), and addToSystem().
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averages data in 'in' to 'out' (from non-reduced to reduced fs)
References escript::Data::getDataPointSize(), escript::Data::getNumDataPointsPerSample(), escript::Data::getNumSamples(), escript::Data::getSampleDataRO(), escript::Data::getSampleDataRW(), and escript::Data::requireWrite().
Referenced by interpolateOnDomain().
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returns a pointer to the list of tags in use for a function space type
Reimplemented from escript::AbstractDomain.
References ripley::Elements, ripley::FaceElements, m_elementTagsInUse, m_faceTagsInUse, m_nodeTagsInUse, ripley::Nodes, ripley::ReducedElements, and ripley::ReducedFaceElements.
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returns the array of reference numbers for a function space type
fsType | The function space type |
Reimplemented from escript::AbstractDomain.
Implemented in ripley::Brick, and ripley::Rectangle.
Referenced by addPoints(), weipa::RipleyNodes::initFromRipley(), and weipa::RipleyElements::initFromRipley().
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checks if this domain allows tags for the specified function space type
Reimplemented from escript::AbstractDomain.
References ripley::DegreesOfFreedom, ripley::Elements, ripley::FaceElements, getDescription(), ripley::Nodes, ripley::Points, ripley::ReducedDegreesOfFreedom, ripley::ReducedElements, ripley::ReducedFaceElements, and ripley::ReducedNodes.
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given a vector of FunctionSpace type codes, passes back a code which all can be interpolated to
Reimplemented from escript::AbstractDomain.
References ripley::DegreesOfFreedom, ripley::Elements, ripley::FaceElements, ripley::Nodes, ripley::Points, ripley::ReducedDegreesOfFreedom, ripley::ReducedElements, ripley::ReducedFaceElements, and ripley::ReducedNodes.
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copies data in 'in' to 'out' (both must be on same function space)
References paso::util::copy(), escript::Data::getDataPointSize(), escript::Data::getNumSamples(), escript::Data::getSampleDataRO(), escript::Data::getSampleDataRW(), and escript::Data::requireWrite().
Referenced by interpolateOnDomain().
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creates the pattern for the column and row couple blocks of the system matrix. colIndices[i] contains all IDs of DOFs that are connected with DOF i but remote and 'N' is the total number of remote components
References createPasoPattern(), getNumDOF(), and paso::M.
Referenced by ripley::Brick::createPattern(), and ripley::Rectangle::createPattern().
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creates the pattern for the main block of the system matrix
References createPasoPattern(), getNumDOF(), and insertNeighbourNodes().
Referenced by ripley::Brick::createPattern(), and ripley::Rectangle::createPattern().
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allocates and returns a Paso pattern structure
References paso::util::copy(), and MATRIX_FORMAT_DEFAULT.
Referenced by createCouplePatterns(), and createMainPattern().
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converts data on degrees of freedom in 'in' to nodes in 'out'
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by interpolateOnDomain().
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dumps the mesh to a file with the given name
filename | The name of the output file |
Reimplemented from escript::AbstractDomain.
Implemented in ripley::Brick, and ripley::Rectangle.
Referenced by BOOST_PYTHON_MODULE().
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privatepure virtual |
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by addPoints().
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returns a description for the given function space type code
Reimplemented from escript::AbstractDomain.
References ripley::DegreesOfFreedom, ripley::Elements, ripley::FaceElements, ripley::Nodes, ripley::Points, ripley::ReducedDegreesOfFreedom, ripley::ReducedElements, ripley::ReducedFaceElements, and ripley::ReducedNodes.
Referenced by interpolateOnDomain(), setToGradient(), and setToIntegrals().
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returns the approximation order used for a function space
Reimplemented from escript::AbstractDomain.
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returns a continuous FunctionSpace code
Reimplemented from escript::AbstractContinuousDomain.
References ripley::Nodes.
Referenced by ripley::Brick::randomFillWorker(), and ripley::Rectangle::randomFillWorker().
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returns the number of data points per sample, and the number of samples as a pair.
fsType | The function space type |
Reimplemented from escript::AbstractContinuousDomain.
References ripley::DegreesOfFreedom, ripley::Elements, ripley::FaceElements, getDescription(), getNumDOF(), getNumElements(), getNumFaceElements(), getNumNodes(), m_diracPoints, m_numDim, ripley::Nodes, ripley::Points, ripley::ReducedDegreesOfFreedom, ripley::ReducedElements, ripley::ReducedFaceElements, and ripley::ReducedNodes.
Referenced by BOOST_PYTHON_MODULE(), weipa::RipleyNodes::initFromRipley(), and weipa::RipleyElements::initFromRipley().
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writes the current mesh to a file with the given name
filename | The name of the file to write to |
returns a description for this domain
Reimplemented from escript::AbstractContinuousDomain.
Implemented in ripley::Brick, and ripley::Rectangle.
Referenced by BOOST_PYTHON_MODULE(), canTag(), getDataShape(), isCellOriented(), preferredInterpolationOnDomain(), Print_Mesh_Info(), and probeInterpolationOnDomain().
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returns the number of spatial dimensions of the domain
Reimplemented from escript::AbstractDomain.
Referenced by BOOST_PYTHON_MODULE(), weipa::RipleyNodes::initFromRipley(), and weipa::RipleyElements::initFromRipley().
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returns a DiracDeltaFunctions FunctionSpace code
Reimplemented from escript::AbstractContinuousDomain.
References ripley::Points.
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protectedpure virtual |
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by assemblePDEDirac().
|
inlinevirtual |
returns a function FunctionSpace code
Reimplemented from escript::AbstractContinuousDomain.
References ripley::Elements.
|
inlinevirtual |
returns a function on boundary FunctionSpace code
Reimplemented from escript::AbstractContinuousDomain.
References ripley::FaceElements.
|
inlinevirtual |
returns a FunctionOnContactOne code
Reimplemented from escript::AbstractContinuousDomain.
|
inlinevirtual |
return a FunctionOnContactZero code
Reimplemented from escript::AbstractContinuousDomain.
|
pure virtual |
returns the tuple (origin, spacing, number_of_elements)
Implemented in ripley::Brick, and ripley::Rectangle.
Referenced by BOOST_PYTHON_MODULE().
|
pure virtual |
returns the index'th coordinate value in given dimension for this rank
Implemented in ripley::Brick, and ripley::Rectangle.
Referenced by weipa::RipleyNodes::initFromRipley().
|
inlinevirtual |
returns the MPI communicator
Reimplemented from escript::AbstractDomain.
|
inlinevirtual |
returns the MPI rank of this processor
Reimplemented from escript::AbstractDomain.
Referenced by BOOST_PYTHON_MODULE(), and weipa::RipleyElements::initFromRipley().
|
inlinevirtual |
returns the number of processors used for this domain
Reimplemented from escript::AbstractDomain.
Referenced by BOOST_PYTHON_MODULE(), interpolateOnDomain(), ripley::Rectangle::ownSample(), ripley::Brick::ownSample(), and setToGradient().
|
pure virtual |
returns the node distribution vector
Implemented in ripley::Brick, and ripley::Rectangle.
Referenced by weipa::RipleyNodes::initFromRipley().
|
virtual |
returns boundary normals at the quadrature point on the face elements
Reimplemented from escript::AbstractDomain.
References escript::functionOnBoundary(), and escript::FunctionSpace::getNormal().
Referenced by BOOST_PYTHON_MODULE().
|
virtual |
returns the number of tags in use for a function space type
Reimplemented from escript::AbstractDomain.
References ripley::Elements, ripley::FaceElements, m_elementTagsInUse, m_faceTagsInUse, m_nodeTagsInUse, ripley::Nodes, ripley::ReducedElements, and ripley::ReducedFaceElements.
|
pure virtual |
returns the number of data points summed across all MPI processes
Reimplemented from escript::AbstractContinuousDomain.
Implemented in ripley::Brick, and ripley::Rectangle.
Referenced by BOOST_PYTHON_MODULE(), and weipa::RipleyNodes::initFromRipley().
|
protectedpure virtual |
returns the number of degrees of freedom per MPI rank
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by assemblePDEDirac(), createCouplePatterns(), createMainPattern(), and getDataShape().
|
protectedpure virtual |
returns the number of elements per MPI rank
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by getDataShape(), Print_Mesh_Info(), and setTags().
|
pure virtual |
returns the number of elements per MPI rank in each dimension
Implemented in ripley::Brick, and ripley::Rectangle.
Referenced by weipa::RipleyElements::initFromRipley().
|
protectedpure virtual |
returns the number of face elements on current MPI rank
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by getDataShape(), and setTags().
|
pure virtual |
returns the number of face elements in the order (left,right,bottom,top,[front,back]) on current MPI rank
Implemented in ripley::Brick, and ripley::Rectangle.
Referenced by weipa::RipleyElements::initFromRipley().
|
protectedpure virtual |
returns the number of nodes per MPI rank
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by getDataShape(), and setTags().
|
pure virtual |
returns the number of nodes per MPI rank in each dimension
Implemented in ripley::Brick, and ripley::Rectangle.
Referenced by weipa::RipleyNodes::initFromRipley(), and weipa::RipleyElements::initFromRipley().
|
pure virtual |
returns the number of spatial subdivisions in each dimension
Implemented in ripley::Brick, and ripley::Rectangle.
Referenced by weipa::RipleyElements::initFromRipley().
|
protectedpure virtual |
returns the Paso system matrix pattern
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by newSystemMatrix(), and newTransportProblem().
|
inlinevirtual |
returns a continuous on reduced order nodes FunctionSpace code
Reimplemented from escript::AbstractContinuousDomain.
References ripley::ReducedNodes.
|
inlinevirtual |
returns a function with reduced integration order FunctionSpace code
Reimplemented from escript::AbstractContinuousDomain.
References ripley::ReducedElements.
|
inlinevirtual |
returns a function on boundary with reduced integration order FunctionSpace code
Reimplemented from escript::AbstractContinuousDomain.
References ripley::ReducedFaceElements.
|
inlinevirtual |
returns a FunctionOnContactOne code with reduced integration order
Reimplemented from escript::AbstractContinuousDomain.
|
inlinevirtual |
returns a FunctionOnContactZero code with reduced integration order
Reimplemented from escript::AbstractContinuousDomain.
|
inlinevirtual |
returns a ReducedSolution FunctionSpace code
Reimplemented from escript::AbstractContinuousDomain.
References ripley::ReducedDegreesOfFreedom.
|
virtual |
returns the element size
Reimplemented from escript::AbstractDomain.
References escript::function(), and escript::FunctionSpace::getSize().
Referenced by BOOST_PYTHON_MODULE().
|
inlinevirtual |
returns a Solution FunctionSpace code
Reimplemented from escript::AbstractContinuousDomain.
References ripley::DegreesOfFreedom.
|
inlinevirtual |
returns a status indicator of the domain. The status identifier should be unique over the lifetime of the object but may be updated if changes to the domain happen, e.g. modifications to its geometry.
Reimplemented from escript::AbstractDomain.
|
virtual |
returns the identifier of the matrix type to be used for the global stiffness matrix when a particular solver, package, preconditioner, and symmetric matrix is used
solver | |
preconditioner | |
package | |
symmetry |
Reimplemented from escript::AbstractContinuousDomain.
References m_mpiInfo.
Referenced by BOOST_PYTHON_MODULE().
|
inlinevirtual |
returns the tag key for tag name
name | tag name |
Reimplemented from escript::AbstractDomain.
Referenced by BOOST_PYTHON_MODULE().
|
virtual |
returns the tag key for the given sample number
fsType | The function space type |
sampleNo | The sample number |
Reimplemented from escript::AbstractDomain.
References ripley::Elements, ripley::FaceElements, m_diracPoints, m_elementTags, m_faceTags, m_nodeTags, ripley::Nodes, ripley::Points, ripley::ReducedElements, and ripley::ReducedFaceElements.
|
virtual |
returns the identifier of the transport problem type to be used when a particular solver, preconditioner, package and symmetric matrix is used
solver | |
preconditioner | |
package | |
symmetry |
Reimplemented from escript::AbstractContinuousDomain.
References m_mpiInfo.
Referenced by BOOST_PYTHON_MODULE().
|
virtual |
returns locations in the FEM nodes
Reimplemented from escript::AbstractDomain.
References escript::continuousFunction(), and escript::FunctionSpace::getX().
Referenced by BOOST_PYTHON_MODULE().
|
protectedpure virtual |
inserts the nodes that share an element with 'node' into 'index' and returns the number of these neighbours
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by createMainPattern().
|
virtual |
interpolates data given on source onto target where source and target are given on different domains
Reimplemented from escript::AbstractDomain.
|
protectedpure virtual |
interpolates data on nodes in 'in' onto (reduced) elements in 'out'
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by interpolateOnDomain().
|
protectedpure virtual |
interpolates data on nodes in 'in' onto (reduced) face elements in 'out'
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by interpolateOnDomain().
|
virtual |
interpolates data given on source onto target where source and target have to be given on the same domain
Reimplemented from escript::AbstractDomain.
References escript::Data::actsExpanded(), averageData(), escript::continuousFunction(), paso::util::copy(), copyData(), ripley::DegreesOfFreedom, dofToNodes(), ripley::Elements, ripley::FaceElements, functionSpaceTypeAsString(), escript::Data::getDataPointSize(), escript::FunctionSpace::getDomain(), escript::Data::getFunctionSpace(), getMPISize(), escript::Data::getSampleDataRO(), escript::Data::getSampleDataRW(), escript::FunctionSpace::getTypeCode(), interpolateNodesOnElements(), interpolateNodesOnFaces(), m_diracPoints, multiplyData(), ripley::Nodes, nodesToDOF(), ripley::Points, escript::reducedContinuousFunction(), ripley::ReducedDegreesOfFreedom, ripley::ReducedElements, ripley::ReducedFaceElements, ripley::ReducedNodes, and escript::Data::requireWrite().
Referenced by setToX().
|
virtual |
returns true if data on this domain and given function space type has to be considered as cell centered data
Reimplemented from escript::AbstractDomain.
References ripley::DegreesOfFreedom, ripley::Elements, ripley::FaceElements, getDescription(), ripley::Nodes, ripley::Points, ripley::ReducedDegreesOfFreedom, ripley::ReducedElements, ripley::ReducedFaceElements, and ripley::ReducedNodes.
|
virtual |
returns true if the argument is a valid function space type for this domain
Reimplemented from escript::AbstractContinuousDomain.
References ripley::DegreesOfFreedom, ripley::Elements, ripley::FaceElements, ripley::Nodes, ripley::Points, ripley::ReducedDegreesOfFreedom, ripley::ReducedElements, ripley::ReducedFaceElements, and ripley::ReducedNodes.
Referenced by preferredInterpolationOnDomain(), and probeInterpolationOnDomain().
|
inlinevirtual |
returns true if name is a defined tag name
name | tag name to be checked |
Reimplemented from escript::AbstractDomain.
Referenced by BOOST_PYTHON_MODULE().
|
inlinevirtual |
if compiled for MPI then executes an MPI_Barrier, else does nothing
Reimplemented from escript::AbstractDomain.
Referenced by BOOST_PYTHON_MODULE(), ripley::Brick::writeBinaryGridImpl(), and ripley::Rectangle::writeBinaryGridImpl().
|
protected |
copies data in 'in' to 'out' (from reduced to non-reduced fs)
References escript::Data::getDataPointSize(), escript::Data::getNumDataPointsPerSample(), escript::Data::getNumSamples(), escript::Data::getSampleDataRO(), escript::Data::getSampleDataRW(), and escript::Data::requireWrite().
Referenced by interpolateOnDomain().
|
virtual |
creates a stiffness matrix and initializes it with zeros
Reimplemented from escript::AbstractContinuousDomain.
References paso::checkPasoError(), ripley::DegreesOfFreedom, escript::FunctionSpace::getDomain(), getPattern(), escript::FunctionSpace::getTypeCode(), MATRIX_FORMAT_TRILINOS_CRS, and ripley::ReducedDegreesOfFreedom.
Referenced by BOOST_PYTHON_MODULE().
|
virtual |
creates a transport problem
Reimplemented from escript::AbstractContinuousDomain.
References paso::checkPasoError(), ripley::DegreesOfFreedom, escript::FunctionSpace::getDomain(), getPattern(), escript::FunctionSpace::getTypeCode(), and ripley::ReducedDegreesOfFreedom.
Referenced by BOOST_PYTHON_MODULE().
|
protectedpure virtual |
converts data on nodes in 'in' to degrees of freedom in 'out'
Implemented in ripley::Rectangle, and ripley::Brick.
Referenced by interpolateOnDomain().
|
inlinevirtual |
returns true if on MPI processor 0, else false
Reimplemented from escript::AbstractDomain.
Referenced by BOOST_PYTHON_MODULE().
|
inlinevirtual |
inequality operator
Reimplemented from escript::AbstractDomain.
|
virtual |
equality operator
Reimplemented from escript::AbstractDomain.
Reimplemented in ripley::Brick, and ripley::Rectangle.
References m_elementTags, m_faceTags, m_nodeTags, and m_tagMap.
|
pure virtual |
returns true if this rank owns the sample id on given function space
Reimplemented from escript::AbstractDomain.
Implemented in ripley::Brick, and ripley::Rectangle.
|
virtual |
Preferred direction of interpolation.
If you really need to test for a particular direction, then use probeInterpolation.
Reimplemented from escript::AbstractDomain.
References ripley::DegreesOfFreedom, ripley::Elements, ripley::FaceElements, getDescription(), isValidFunctionSpaceType(), ripley::Nodes, ripley::Points, ripley::ReducedDegreesOfFreedom, ripley::ReducedElements, ripley::ReducedFaceElements, and ripley::ReducedNodes.
|
virtual |
writes information about the mesh to standard output
full | whether to print additional data |
Reimplemented from escript::AbstractContinuousDomain.
Reimplemented in ripley::Brick, and ripley::Rectangle.
References getDescription(), getNumElements(), m_mpiInfo, m_numDim, m_tagMap, Esys_MPIInfo::rank, and Esys_MPIInfo::size.
Referenced by BOOST_PYTHON_MODULE(), ripley::Rectangle::Print_Mesh_Info(), and ripley::Brick::Print_Mesh_Info().
|
virtual |
determines whether interpolation from source to target is possible
Reimplemented from escript::AbstractDomain.
|
virtual |
returns true if data on fsType_source can be interpolated onto fsType_target, false otherwise
Reimplemented from escript::AbstractDomain.
References ripley::DegreesOfFreedom, ripley::Elements, ripley::FaceElements, getDescription(), isValidFunctionSpaceType(), ripley::Nodes, ripley::Points, ripley::ReducedDegreesOfFreedom, ripley::ReducedElements, ripley::ReducedFaceElements, and ripley::ReducedNodes.
|
pure virtual |
Implemented in ripley::Brick, and ripley::Rectangle.
Referenced by ripley::readBinaryGrid().
|
pure virtual |
Implemented in ripley::Brick, and ripley::Rectangle.
Referenced by ripley::readNcGrid().
|
inlinevirtual |
Reimplemented in ripley::Brick, and ripley::Rectangle.
Referenced by setAssemblerFromPython().
void ripley::RipleyDomain::setAssemblerFromPython | ( | std::string | type, |
boost::python::list | options | ||
) |
References setAssembler(), and ripley::tupleListToMap().
Referenced by BOOST_PYTHON_MODULE().
|
virtual |
assigns new location to the domain.
Reimplemented from escript::AbstractContinuousDomain.
|
inlinevirtual |
sets a map from a clear tag name to a tag key
name | tag name |
tag | tag key |
Reimplemented from escript::AbstractDomain.
Referenced by BOOST_PYTHON_MODULE(), ripley::Brick::Brick(), ripley::Brick::populateSampleIds(), ripley::Rectangle::populateSampleIds(), and ripley::Rectangle::Rectangle().
|
virtual |
assigns new tag newTag to all samples of given function space with a positive value of mask for any of its sample points
Reimplemented from escript::AbstractDomain.
References ripley::Elements, ripley::FaceElements, getNumElements(), getNumFaceElements(), getNumNodes(), escript::Data::getSampleDataRO(), m_elementTags, m_faceTags, m_nodeTags, ripley::Nodes, ripley::ReducedElements, ripley::ReducedFaceElements, and updateTagsInUse().
|
virtual |
copies the gradient of 'in' into 'out'. The actual function space to be considered for the gradient is defined by 'in'. Both arguments have to be defined on this domain.
Reimplemented from escript::AbstractDomain.
References assembleGradient(), escript::continuousFunction(), ripley::DegreesOfFreedom, ripley::Elements, ripley::FaceElements, functionSpaceTypeAsString(), escript::FunctionSpace::getDomain(), escript::Data::getFunctionSpace(), getMPISize(), escript::FunctionSpace::getTypeCode(), ripley::Nodes, escript::reducedContinuousFunction(), ripley::ReducedDegreesOfFreedom, ripley::ReducedElements, ripley::ReducedFaceElements, and ripley::ReducedNodes.
|
virtual |
copies the integrals of the function defined by arg into integrals. arg has to be defined on this domain.
Reimplemented from escript::AbstractContinuousDomain.
References assembleIntegrate(), ripley::DegreesOfFreedom, ripley::Elements, ripley::FaceElements, escript::function(), functionSpaceTypeAsString(), escript::FunctionSpace::getDomain(), escript::Data::getFunctionSpace(), escript::FunctionSpace::getTypeCode(), ripley::Nodes, ripley::ReducedDegreesOfFreedom, ripley::ReducedElements, ripley::ReducedFaceElements, and ripley::ReducedNodes.
|
pure virtual |
copies the surface normals at data points into out. The actual function space to be considered is defined by out. out has to be defined on this domain.
Reimplemented from escript::AbstractDomain.
Implemented in ripley::Brick, and ripley::Rectangle.
|
pure virtual |
copies the size of samples into out. The actual function space to be considered is defined by out. out has to be defined on this domain.
Reimplemented from escript::AbstractDomain.
Implemented in ripley::Brick, and ripley::Rectangle.
|
virtual |
copies the location of data points into arg. The domain of arg has to match this domain.
Reimplemented from escript::AbstractDomain.
References assembleCoordinates(), escript::continuousFunction(), escript::FunctionSpace::getDomain(), escript::Data::getFunctionSpace(), escript::FunctionSpace::getTypeCode(), interpolateOnDomain(), escript::Data::isExpanded(), ripley::Nodes, and escript::Vector().
|
virtual |
returns all tag names in a single string separated by commas
Reimplemented from escript::AbstractDomain.
References m_tagMap.
Referenced by BOOST_PYTHON_MODULE().
|
inlinevirtual |
returns true if this domain supports contact elements, false otherwise
Reimplemented from escript::AbstractDomain.
|
virtual |
true if this domain can handle the specified tuple of filter options.
Reimplemented from escript::AbstractDomain.
|
protected |
References Esys_MPIInfo::comm, ripley::Elements, ripley::FaceElements, INDEX_T_MAX, INDEX_T_MIN, m_elementTags, m_elementTagsInUse, m_faceTags, m_faceTagsInUse, m_mpiInfo, m_nodeTags, m_nodeTagsInUse, MPI_INT, ripley::Nodes, ripley::Points, ripley::ReducedElements, and ripley::ReducedFaceElements.
Referenced by ripley::Brick::populateSampleIds(), ripley::Rectangle::populateSampleIds(), and setTags().
|
pure virtual |
Implemented in ripley::Brick, and ripley::Rectangle.
Referenced by BOOST_PYTHON_MODULE().
|
protected |
|
protected |
Referenced by RipleyDomain(), ripley::Rectangle::setAssembler(), and ripley::Brick::setAssembler().
|
protected |
|
protected |
Referenced by addPoints(), assemblePDEDirac(), getDataShape(), getTagFromSampleNo(), and interpolateOnDomain().
|
mutableprotected |
|
mutableprotected |
Referenced by borrowListOfTagsInUse(), getNumberOfTagsInUse(), and updateTagsInUse().
|
mutableprotected |
|
mutableprotected |
Referenced by borrowListOfTagsInUse(), getNumberOfTagsInUse(), and updateTagsInUse().
|
protected |
Referenced by ripley::Brick::Brick(), ripley::Brick::createPattern(), ripley::Rectangle::createPattern(), ripley::Rectangle::dump(), ripley::Brick::dump(), getSystemMatrixTypeId(), getTransportTypeId(), ripley::Brick::populateSampleIds(), ripley::Rectangle::populateSampleIds(), Print_Mesh_Info(), ripley::Brick::randomFillWorker(), ripley::Rectangle::randomFillWorker(), ripley::Rectangle::Rectangle(), RipleyDomain(), updateTagsInUse(), and ~RipleyDomain().
|
mutableprotected |
|
mutableprotected |
Referenced by borrowListOfTagsInUse(), getNumberOfTagsInUse(), and updateTagsInUse().
|
protected |
|
protected |
|
protected |
Referenced by operator==(), Print_Mesh_Info(), and showTagNames().