public class PercolationSubstrate extends SquashyInflammationSubstrate
chuck, cylinder, P
a, border, factor, intersectsBoundary, spatialOptInitialised, voxToObjects
Constructor and Description |
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PercolationSubstrate(SimulationParams simParams)
constructor.
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Modifier and Type | Method and Description |
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static void |
main(java.lang.String[] args)
test construction of percolation substrate
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drawCrossSection, getPeakCoord, getSubstrateSize, init, intracellular
crossesMembrane, getCylinders, setSubstrateDims
amend, getBottomLeft, getDiffusivityAt, getLogMagnetisationChange, getN, getSubsObj, getSubstrateCoords, getSubVoxelIndex, getUpperRight, initBoundaryIntersectionArrays, initCandidates, initialiseSpatialOptimisation, mapStepIntoSubstrate, moreCandidates, nextCandidate, testAmendment, testStepAmendment, unmapStepFromSubstrate, voxelContains
public PercolationSubstrate(SimulationParams simParams)
rmin
- min cylinder radiusrmax
- max cylinder radiusnumCylinders
- number cylindersnumVoxels
- number of voxels to synthesisenumIncrements
- number of inflammation incrementssubstrateSize
- size of substrate