Registered by graingert

debug symbols for package samtools
manipulates nucleotide sequence alignments in BAM or SAM format
processing sequence alignments in SAM and BAM formats

Samtools is a suite of programs for interacting with high-throughput sequencing data. It consists of three separate repositories:

Samtools
    Reading/writing/editing/indexing/viewing SAM/BAM/CRAM format
BCFtools
    Reading/writing BCF2/VCF/gVCF files and calling/filtering/summarising SNP and short indel sequence variants
HTSlib
    A C library for reading/writing high-throughput sequencing data

Samtools and BCFtools both use HTSlib internally, but these source packages contain their own copies of htslib so they can be built independently.

Project information

Maintainer:
Registry Administrators
Driver:
Not yet selected
Licence:
MIT / X / Expat Licence

RDF metadata

View full history Series and milestones

trunk series is the current focus of development.

All packages Packages in Distributions

Get Involved

  • warning
    Report a bug
  • warning
    Ask a question
  • warning
    Help translate

Downloads

Samtools does not have any download files registered with Launchpad.