diff -Nru drop-seq-2.5.1+dfsg/debian/changelog drop-seq-2.5.1+dfsg/debian/changelog --- drop-seq-2.5.1+dfsg/debian/changelog 2022-01-16 15:45:58.000000000 +0000 +++ drop-seq-2.5.1+dfsg/debian/changelog 2022-02-22 20:15:50.000000000 +0000 @@ -1,3 +1,10 @@ +drop-seq (2.5.1+dfsg-2) unstable; urgency=medium + + * Team upload + * Depending on libbiojava5-java instead of libbiojava4-java + + -- Pierre Gruet Tue, 22 Feb 2022 21:15:50 +0100 + drop-seq (2.5.1+dfsg-1) unstable; urgency=medium * New upstream version diff -Nru drop-seq-2.5.1+dfsg/debian/control drop-seq-2.5.1+dfsg/debian/control --- drop-seq-2.5.1+dfsg/debian/control 2022-01-16 15:45:58.000000000 +0000 +++ drop-seq-2.5.1+dfsg/debian/control 2022-02-22 19:43:06.000000000 +0000 @@ -6,7 +6,7 @@ Build-Depends: debhelper-compat (= 13), javahelper, default-jdk-headless, - libbiojava4.0-java, + libbiojava5-java, libhtsjdk-java, libpicard-java, libcommons-collections4-java, @@ -31,7 +31,7 @@ default-jre | java-runtime, java-wrappers, picard-tools, - libbiojava4.0-java, + libbiojava5-java, libpicard-java, libcommons-collections4-java, libcommons-lang-java, diff -Nru drop-seq-2.5.1+dfsg/debian/drop-seq-tools.manifest drop-seq-2.5.1+dfsg/debian/drop-seq-tools.manifest --- drop-seq-2.5.1+dfsg/debian/drop-seq-tools.manifest 2022-01-16 15:45:58.000000000 +0000 +++ drop-seq-2.5.1+dfsg/debian/drop-seq-tools.manifest 2022-02-22 19:43:31.000000000 +0000 @@ -1,3 +1,3 @@ usr/share/java/dropseq.jar: Main-Class: org.broadinstitute.dropseqrna.cmdline.DropSeqMain - Class-Path: /usr/share/java/guava.jar /usr/share/java/gson.jar /usr/share/java/htsjdk.jar /usr/share/java/picard.jar /usr/share/java/commons-collections4.jar /usr/share/java/commons-io.jar /usr/share/java/commons-lang.jar /usr/share/java/commons-math3.jar /usr/share/java/barclay.jar /usr/share/java/la4j.jar /usr/share/java/snakeyaml.jar /usr/share/java/biojava4-alignment.jar /usr/share/java/biojava4-core.jar + Class-Path: /usr/share/java/guava.jar /usr/share/java/gson.jar /usr/share/java/htsjdk.jar /usr/share/java/picard.jar /usr/share/java/commons-collections4.jar /usr/share/java/commons-io.jar /usr/share/java/commons-lang.jar /usr/share/java/commons-math3.jar /usr/share/java/barclay.jar /usr/share/java/la4j.jar /usr/share/java/snakeyaml.jar /usr/share/java/biojava5-alignment.jar /usr/share/java/biojava5-core.jar diff -Nru drop-seq-2.5.1+dfsg/debian/rules drop-seq-2.5.1+dfsg/debian/rules --- drop-seq-2.5.1+dfsg/debian/rules 2022-01-16 15:45:58.000000000 +0000 +++ drop-seq-2.5.1+dfsg/debian/rules 2022-02-22 19:43:52.000000000 +0000 @@ -17,8 +17,8 @@ dh_auto_configure mkdir -p lib/test ln -s /usr/share/java/commons-collections4.jar lib/commons-collections4.jar - ln -s /usr/share/java/biojava4-alignment.jar lib/biojava4-alignment.jar - ln -s /usr/share/java/biojava4-core.jar lib/biojava4-core.jar + ln -s /usr/share/java/biojava5-alignment.jar lib/biojava5-alignment.jar + ln -s /usr/share/java/biojava5-core.jar lib/biojava5-core.jar ln -s /usr/share/java/commons-io.jar lib/commons-io.jar ln -s /usr/share/java/commons-lang.jar lib/commons-lang.jar ln -s /usr/share/java/commons-math3.jar lib/commons-math3.jar