diff -Nru libbio-mage-utils-perl-20030502.0/debian/changelog libbio-mage-utils-perl-20030502.0/debian/changelog --- libbio-mage-utils-perl-20030502.0/debian/changelog 2013-10-24 13:59:47.000000000 +0000 +++ libbio-mage-utils-perl-20030502.0/debian/changelog 2017-11-21 14:36:27.000000000 +0000 @@ -1,3 +1,13 @@ +libbio-mage-utils-perl (20030502.0-3) unstable; urgency=medium + + * Moved packaging from SVN to Git + * Secure URI in watch file pointing to CPAN + * debhelper 10 + * Standards-Version: 4.1.1; cme fix dpkg-copyright + * Fix spelling + + -- Andreas Tille Tue, 21 Nov 2017 15:36:27 +0100 + libbio-mage-utils-perl (20030502.0-2) unstable; urgency=low * debian/source/format: 3.0 (quilt) diff -Nru libbio-mage-utils-perl-20030502.0/debian/compat libbio-mage-utils-perl-20030502.0/debian/compat --- libbio-mage-utils-perl-20030502.0/debian/compat 2013-10-24 13:23:08.000000000 +0000 +++ libbio-mage-utils-perl-20030502.0/debian/compat 2017-11-21 14:36:27.000000000 +0000 @@ -1 +1 @@ -9 +10 diff -Nru libbio-mage-utils-perl-20030502.0/debian/control libbio-mage-utils-perl-20030502.0/debian/control --- libbio-mage-utils-perl-20030502.0/debian/control 2013-10-24 13:27:06.000000000 +0000 +++ libbio-mage-utils-perl-20030502.0/debian/control 2017-11-21 14:36:27.000000000 +0000 @@ -4,10 +4,10 @@ Andreas Tille Section: science Priority: optional -Build-Depends: debhelper (>= 9) -Standards-Version: 3.9.4 -Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/libbio-mage-utils-perl/trunk/ -Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/libbio-mage-utils-perl/trunk/ +Build-Depends: debhelper (>= 10) +Standards-Version: 4.1.1 +Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/libbio-mage-utils-perl.git +Vcs-Git: https://anonscm.debian.org/git/debian-med/libbio-mage-utils-perl.git Homepage: http://mged.sourceforge.net/ Package: libbio-mage-utils-perl diff -Nru libbio-mage-utils-perl-20030502.0/debian/copyright libbio-mage-utils-perl-20030502.0/debian/copyright --- libbio-mage-utils-perl-20030502.0/debian/copyright 2013-10-24 13:58:41.000000000 +0000 +++ libbio-mage-utils-perl-20030502.0/debian/copyright 2017-11-21 14:36:27.000000000 +0000 @@ -1,4 +1,4 @@ -Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: Bio-MAGE-Utils Upstream-Contact: The MAGE-Perl Hackers Jason E. Stewart @@ -12,22 +12,22 @@ statements have the same license as Bio::MAGE, MIT/X11. -- Charles Plessy -Files: MAGE/XML/Handler/ObjectHandler/SQL.pm +Files: MAGE/XML/Handler/ObjectHandler/SQL.pm MAGE/XML/Handler/ObjectHandlerI.pm Copyright: © 2003 Allen Day License: Perl - You may distribute this module under the same terms as perl itself + You may distribute this module under the same terms as perl itself . License: Perl . - This program is free software; you can redistribute it and/or modify - it under the terms of either: + This program is free software; you can redistribute it and/or modify + it under the terms of either: . - a) the GNU General Public License as published by the Free Software - Foundation; either version 1, or (at your option) any later - version, or + a) the GNU General Public License as published by the Free Software + Foundation; either version 1, or (at your option) any later + version, or . - b) the "Artistic License" which comes with Perl. + b) the "Artistic License" which comes with Perl. . On Debian GNU/Linux systems, the complete text of the latest version of the GNU General Public License can be found in ‘/usr/share/common-licenses/GPL’ and the @@ -35,26 +35,26 @@ Files: debian/* Copyright: © 2008–2010 Charles Plessy - © 2013 Andreas Tille + © 2013-2017 Andreas Tille License: MIT License: MIT - Permission is hereby granted, free of charge, to any person - obtaining a copy of this software and associated documentation files - (the "Software"), to deal in the Software without restriction, - including without limitation the rights to use, copy, modify, merge, - publish, distribute, sublicense, and/or sell copies of the Software, - and to permit persons to whom the Software is furnished to do so, - subject to the following conditions: - . - The above copyright notice and this permission notice shall be - included in all copies or substantial portions of the Software. - . - THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, - EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF - MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND - NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS - BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN - ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN - CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE - SOFTWARE. + Permission is hereby granted, free of charge, to any person + obtaining a copy of this software and associated documentation files + (the "Software"), to deal in the Software without restriction, + including without limitation the rights to use, copy, modify, merge, + publish, distribute, sublicense, and/or sell copies of the Software, + and to permit persons to whom the Software is furnished to do so, + subject to the following conditions: + . + The above copyright notice and this permission notice shall be + included in all copies or substantial portions of the Software. + . + THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, + EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF + MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND + NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS + BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN + ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN + CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE + SOFTWARE. diff -Nru libbio-mage-utils-perl-20030502.0/debian/patches/series libbio-mage-utils-perl-20030502.0/debian/patches/series --- libbio-mage-utils-perl-20030502.0/debian/patches/series 2013-10-24 13:18:39.000000000 +0000 +++ libbio-mage-utils-perl-20030502.0/debian/patches/series 2017-11-21 14:36:27.000000000 +0000 @@ -1 +1,2 @@ move-MAGE-root.patch +spelling.patch diff -Nru libbio-mage-utils-perl-20030502.0/debian/patches/spelling.patch libbio-mage-utils-perl-20030502.0/debian/patches/spelling.patch --- libbio-mage-utils-perl-20030502.0/debian/patches/spelling.patch 1970-01-01 00:00:00.000000000 +0000 +++ libbio-mage-utils-perl-20030502.0/debian/patches/spelling.patch 2017-11-21 14:36:27.000000000 +0000 @@ -0,0 +1,52 @@ +Author: Andreas Tille +Last-Update: Tue, 21 Nov 2017 15:29:17 +0100 +Desription: Fix spelling + +diff --git a/MAGE/XML/Handler.pm b/MAGE/XML/Handler.pm +index 97b2c6c..e5cfcfe 100644 +--- a/MAGE/XML/Handler.pm ++++ b/MAGE/XML/Handler.pm +@@ -82,7 +82,7 @@ sub unhandled { + + + ############################################################################### +-# count: setter/getter for the scalar to track counting ouput ++# count: setter/getter for the scalar to track counting output + ############################################################################### + sub count { + my $self = shift; +diff --git a/MAGE/XML/Reader.pm b/MAGE/XML/Reader.pm +index 8e075fd..15986ec 100644 +--- a/MAGE/XML/Reader.pm ++++ b/MAGE/XML/Reader.pm +@@ -124,7 +124,7 @@ sub sax1 { + } + + ############################################################################### +-# count: setter/getter for the scalar to track counting ouput ++# count: setter/getter for the scalar to track counting output + ############################################################################### + sub count { + my $self = shift; +@@ -151,7 +151,7 @@ output + + =item * log_file + +-called with the file handle to which ouput should be sent ++called with the file handle to which output should be sent + + =item * init + +diff --git a/MAGE/XML/Writer.pm b/MAGE/XML/Writer.pm +index e643bfd..ae31722 100644 +--- a/MAGE/XML/Writer.pm ++++ b/MAGE/XML/Writer.pm +@@ -920,7 +920,7 @@ sub data_format { + + The C attribute only controls where the main MAGE-ML document is + written. If the C attribute is set, the writer will +-also create a seperate external data file for each data cube. ++also create a separate external data file for each data cube. + + The C controls what director those files are + written to. diff -Nru libbio-mage-utils-perl-20030502.0/debian/watch libbio-mage-utils-perl-20030502.0/debian/watch --- libbio-mage-utils-perl-20030502.0/debian/watch 2013-09-12 09:00:35.000000000 +0000 +++ libbio-mage-utils-perl-20030502.0/debian/watch 2017-11-21 14:36:27.000000000 +0000 @@ -1,2 +1,2 @@ -version=3 -http://sf.net/mged/Bio-MAGE-Utils-(.*)\.tar\.gz +version=4 +https://metacpan.org/release//Bio-MAGE-Utils/ .*/Bio-MAGE-Utils-@ANY_VERSION@@ARCHIVE_EXT@