diff -Nru libchado-perl-1.31/debian/changelog libchado-perl-1.31/debian/changelog --- libchado-perl-1.31/debian/changelog 2018-09-27 18:49:54.000000000 +0000 +++ libchado-perl-1.31/debian/changelog 2019-12-05 08:35:16.000000000 +0000 @@ -1,3 +1,13 @@ +libchado-perl (1.31-6) unstable; urgency=medium + + [ Jelmer Vernooij ] + * Trim trailing whitespace. + * Use secure copyright file specification URI. + [ Olivier Sallou ] + * Fix postinstall script for case of USER env var not set (Closes: #939832) + + -- Olivier Sallou Thu, 05 Dec 2019 08:35:16 +0000 + libchado-perl (1.31-5) unstable; urgency=medium * debhelper 11 @@ -37,7 +47,7 @@ libchado-perl (1.31-1) unstable; urgency=medium - * New upstream release + * New upstream release -- Olivier Sallou Tue, 12 Apr 2016 17:45:45 +0200 @@ -59,7 +69,7 @@ libchado-perl (1.23-3) unstable; urgency=medium - * Add libmodule-build-perl dependency (Closes: #789114). + * Add libmodule-build-perl dependency (Closes: #789114). -- Olivier Sallou Fri, 19 Jun 2015 11:08:05 +0200 @@ -74,7 +84,7 @@ libchado-perl (1.23-1) unstable; urgency=low - * New upstream release + * New upstream release -- Olivier Sallou Thu, 03 Jan 2013 11:24:54 +0100 @@ -83,21 +93,21 @@ * debian/rules: fix permissions on gmod-chado file and remove unneeded file load.conf (Closes: #689111). * debian/postinst: fix permissions on pgpass file - (Closes: #689111). + (Closes: #689111). -- Olivier Sallou Tue, 09 Oct 2012 14:27:37 +0200 libchado-perl (1.22-3) unstable; urgency=low * debian/patches/remove_pl_extension.patch: - - add patch to use libdbix-dbstag-perl binary without extension + - add patch to use libdbix-dbstag-perl binary without extension -- Olivier Sallou Mon, 19 Mar 2012 09:26:00 +0100 libchado-perl (1.22-2) unstable; urgency=low [Olivier Sallou] - * Fix perl Depends not set by perl:Depends (Closes: #659295) + * Fix perl Depends not set by perl:Depends (Closes: #659295) * debian/postrm: in case of purge, remove generated files [Charles Plessy] * Corrected Vcs fields (debian/control). diff -Nru libchado-perl-1.31/debian/control libchado-perl-1.31/debian/control --- libchado-perl-1.31/debian/control 2018-09-27 18:49:54.000000000 +0000 +++ libchado-perl-1.31/debian/control 2019-12-05 08:35:16.000000000 +0000 @@ -82,7 +82,7 @@ libchado-perl Recommends: xsltproc Description: tools to add/extract data from Chado - This package contains several tools that can be used to + This package contains several tools that can be used to extract data from Chado database or prepare data before upload. It is a subset above the Chado database schema and libraries. . diff -Nru libchado-perl-1.31/debian/copyright libchado-perl-1.31/debian/copyright --- libchado-perl-1.31/debian/copyright 2018-09-27 18:49:54.000000000 +0000 +++ libchado-perl-1.31/debian/copyright 2019-12-05 08:35:16.000000000 +0000 @@ -1,4 +1,4 @@ -Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Source: http://gmod.org/wiki/Chado_-_Getting_Started Upstream-Name: chado diff -Nru libchado-perl-1.31/debian/postinst libchado-perl-1.31/debian/postinst --- libchado-perl-1.31/debian/postinst 2018-09-27 18:49:54.000000000 +0000 +++ libchado-perl-1.31/debian/postinst 2019-12-05 08:35:16.000000000 +0000 @@ -40,9 +40,10 @@ mkdir -p /usr/share/gmod/chado/lib/Bio/Chado/ if [ -e /etc/gmod/gmod-chado.conf ]; then export GMOD_ROOT=/usr/share/gmod/chado + export CHADO_DB_NAME=gmod-chado + export CHADO_DB_USERNAME=chado . /etc/gmod/gmod-chado.conf cd /usr/share/gmod/chado - export CHADO_DB_NAME=gmod-chado CHADOTMP=`mktemp -d` perl Makefile.PL update GMOD_ROOT=/usr/share/gmod/chado DBNAME=$CHADO_DB_NAME DBUSER=$DBUSER DBPASS=$DBPASS DBHOST=$DBHOST DBPORT=$DBPORT DBDRIVER=PostgreSQL SIMPLE=Y RECONFIGURE=1 LOCAL_TMP=$CHADOTMP &> /dev/null rm -rf $CHADOTMP diff -Nru libchado-perl-1.31/debian/rules libchado-perl-1.31/debian/rules --- libchado-perl-1.31/debian/rules 2018-09-27 18:49:54.000000000 +0000 +++ libchado-perl-1.31/debian/rules 2019-12-05 08:35:16.000000000 +0000 @@ -6,6 +6,7 @@ export GMOD_ROOT=$(CURDIR)/debian/$(DEB_SOURCE)/usr/share/gmod/chado export CHAOS_HOME=$(CURDIR)/debian/$(DEB_SOURCE)/usr/share/gmod/chaos export CHADO_DB_NAME=gmod-chado +export CHADO_DB_USERNAME=chado export PREFIX=/usr %: @@ -69,4 +70,4 @@ find debian -name Skip_tables.pm -exec chmod 644 \{\} \; find debian -name "*.tt2" -exec chmod 644 \{\} \; find debian -name "*.tmpl" -exec chmod 644 \{\} \; - \ No newline at end of file +