diff -Nru libseqlib-1.1.2+dfsg/debian/changelog libseqlib-1.1.2+dfsg/debian/changelog
--- libseqlib-1.1.2+dfsg/debian/changelog	2019-12-18 13:17:13.000000000 +0000
+++ libseqlib-1.1.2+dfsg/debian/changelog	2020-02-15 17:48:43.000000000 +0000
@@ -1,3 +1,15 @@
+libseqlib (1.1.2+dfsg-6) unstable; urgency=medium
+
+  * Team upload.
+  * Standards-Version: 4.5.0 (routine-update)
+  * Set upstream metadata fields: Bug-Submit.
+  * debian/control: use ${devlibs:Depends} for the -dev package
+  * Properly link the shared library against libjsoncpp, libfml, ssw, & htslib
+  * Modified use of pkg-config to be friendly for cross-building this package
+  * Use pkg-kde-tools to manage the symbols
+
+ -- Michael R. Crusoe <michael.crusoe@gmail.com>  Sat, 15 Feb 2020 18:48:43 +0100
+
 libseqlib (1.1.2+dfsg-5) unstable; urgency=medium
 
   * Avoid using non-public HTSlib headers and functions
diff -Nru libseqlib-1.1.2+dfsg/debian/control libseqlib-1.1.2+dfsg/debian/control
--- libseqlib-1.1.2+dfsg/debian/control	2019-12-18 13:17:13.000000000 +0000
+++ libseqlib-1.1.2+dfsg/debian/control	2020-02-15 17:14:01.000000000 +0000
@@ -6,6 +6,7 @@
 Build-Depends: debhelper-compat (= 12),
                d-shlibs,
                pkg-config,
+               pkg-kde-tools,
                libhts-dev,
                libcurl4-openssl-dev | libcurl4-dev,
                zlib1g-dev,
@@ -13,7 +14,7 @@
                libbwa-dev (>= 0.7.15-3),
                libjsoncpp-dev,
                libssw-dev
-Standards-Version: 4.4.1
+Standards-Version: 4.5.0
 Vcs-Browser: https://salsa.debian.org/med-team/libseqlib
 Vcs-Git: https://salsa.debian.org/med-team/libseqlib.git
 Homepage: https://github.com/walaj/SeqLib
@@ -40,14 +41,9 @@
 Architecture: any
 Section: libdevel
 Depends: libseqlib1 (= ${binary:Version}),
-         ${shlibs:Depends},
+         ${devlibs:Depends},
          ${misc:Depends},
-         libhts-dev (>= 1.3.2-3),
-         libjsoncpp-dev,
          libbwa-dev,
-         libfml-dev,
-         libssw-dev,
-         zlib1g-dev
 Description: C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev)
  C++ API and command line tool that provides a rapid and user-friendly
  interface to BAM/SAM/CRAM files, global sequence alignment operations
diff -Nru libseqlib-1.1.2+dfsg/debian/libseqlib1.symbols libseqlib-1.1.2+dfsg/debian/libseqlib1.symbols
--- libseqlib-1.1.2+dfsg/debian/libseqlib1.symbols	2019-12-18 13:17:13.000000000 +0000
+++ libseqlib-1.1.2+dfsg/debian/libseqlib1.symbols	2020-02-15 17:41:07.000000000 +0000
@@ -1,441 +1,554 @@
+# SymbolsHelper-Confirmed: 1.1.2 amd64 arm64 armel armhf i386 mips64el ppc64el riscv64
 libseqlib.so.1 libseqlib1 #MINVER#
- _ZN12aho_corasick10basic_trieIcE10parse_textENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN12aho_corasick10basic_trieIcE24construct_failure_statesEv@Base 1.1.1+dfsg
- _ZN12aho_corasick13interval_treeINS_7ahoemitIcEEE15remove_overlapsERKSt6vectorIS2_SaIS2_EE@Base 1.1.1+dfsg
- _ZN12aho_corasick13interval_treeINS_7ahoemitIcEEE4node13find_overlapsERKS2_@Base 1.1.1+dfsg
- _ZN12aho_corasick13interval_treeINS_7ahoemitIcEEE4nodeC1ERKSt6vectorIS2_SaIS2_EE@Base 1.1.1+dfsg
- _ZN12aho_corasick13interval_treeINS_7ahoemitIcEEE4nodeC2ERKSt6vectorIS2_SaIS2_EE@Base 1.1.1+dfsg
- _ZN12aho_corasick13interval_treeINS_7ahoemitIcEEE4nodeD1Ev@Base 1.1.1+dfsg
- _ZN12aho_corasick13interval_treeINS_7ahoemitIcEEE4nodeD2Ev@Base 1.1.1+dfsg
- _ZN4Json6ReaderD1Ev@Base 1.1.1+dfsg
- _ZN4Json6ReaderD2Ev@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper10SetGapOpenEi@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper11SetZDropoffEi@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper11seqlib_add1EPK6kseq_tP8bntseq_tPhPlPiS8_PP9bntamb1_t@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper12SetBandwidthEi@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper14ConstructIndexERKSt6vectorINS_17UnalignedSequenceESaIS2_EE@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper15SetGapExtensionEi@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper15seqlib_make_pacERKSt6vectorINS_17UnalignedSequenceESaIS2_EEb@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper16SetReseedTriggerEf@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper18SetMismatchPenaltyEi@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper18seqlib_add_to_annsERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_P9bntann1_tm@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper18seqlib_bwt_pac2bwtEPKhi@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper24Set3primeClippingPenaltyEi@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper24Set5primeClippingPenaltyEi@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper9LoadIndexERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib10BWAWrapper9SetAScoreEi@Base 1.1.1+dfsg
- _ZN6SeqLib10CigarFieldC1Ecj@Base 1.1.1+dfsg
- _ZN6SeqLib10CigarFieldC2Ecj@Base 1.1.1+dfsg
- _ZN6SeqLib11FastqReader15GetNextSequenceERNS_17UnalignedSequenceE@Base 1.1.1+dfsg
- _ZN6SeqLib11FastqReader4OpenERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib11FastqReaderC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib11FastqReaderC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib13GenomicRegion3PadEi@Base 1.1.1+dfsg
- _ZN6SeqLib13GenomicRegionC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.1+dfsg
- _ZN6SeqLib13GenomicRegionC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_S8_RKNS_9BamHeaderE@Base 1.1.1+dfsg
- _ZN6SeqLib13GenomicRegionC1Eiiic@Base 1.1.1+dfsg
- _ZN6SeqLib13GenomicRegionC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.1+dfsg
- _ZN6SeqLib13GenomicRegionC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_S8_RKNS_9BamHeaderE@Base 1.1.1+dfsg
- _ZN6SeqLib13GenomicRegionC2Eiiic@Base 1.1.1+dfsg
- _ZN6SeqLib13TIntervalTreeIimEC1ERKS1_@Base 1.1.1+dfsg
- _ZN6SeqLib13TIntervalTreeIimEC1ERSt6vectorINS_9TIntervalIimEESaIS4_EEmmmmm@Base 1.1.1+dfsg
- _ZN6SeqLib13TIntervalTreeIimEC2ERKS1_@Base 1.1.1+dfsg
- _ZN6SeqLib13TIntervalTreeIimEC2ERSt6vectorINS_9TIntervalIimEESaIS4_EEmmmmm@Base 1.1.1+dfsg
- _ZN6SeqLib13TIntervalTreeIimED1Ev@Base 1.1.1+dfsg
- _ZN6SeqLib13TIntervalTreeIimED2Ev@Base 1.1.1+dfsg
- _ZN6SeqLib14FermiAssembler10ClearReadsEv@Base 1.1.1+dfsg
- _ZN6SeqLib14FermiAssembler12ClearContigsEv@Base 1.1.1+dfsg
- _ZN6SeqLib14FermiAssembler12CorrectReadsEv@Base 1.1.1+dfsg
- _ZN6SeqLib14FermiAssembler14DirectAssembleEf@Base 1.1.1+dfsg
- _ZN6SeqLib14FermiAssembler15PerformAssemblyEv@Base 1.1.1+dfsg
- _ZN6SeqLib14FermiAssembler21CorrectAndFilterReadsEv@Base 1.1.1+dfsg
- _ZN6SeqLib14FermiAssembler7AddReadERKNS_17UnalignedSequenceE@Base 1.1.1+dfsg
- _ZN6SeqLib14FermiAssembler7AddReadERKNS_9BamRecordE@Base 1.1.1+dfsg
- _ZN6SeqLib14FermiAssembler8AddReadsERKSt6vectorINS_17UnalignedSequenceESaIS2_EE@Base 1.1.1+dfsg
- _ZN6SeqLib14FermiAssembler8AddReadsERKSt6vectorINS_9BamRecordESaIS2_EE@Base 1.1.1+dfsg
- _ZN6SeqLib14FermiAssemblerC1Ev@Base 1.1.1+dfsg
- _ZN6SeqLib14FermiAssemblerC2Ev@Base 1.1.1+dfsg
- _ZN6SeqLib14FermiAssemblerD1Ev@Base 1.1.1+dfsg
- _ZN6SeqLib14FermiAssemblerD2Ev@Base 1.1.1+dfsg
- _ZN6SeqLib17UnalignedSequenceD1Ev@Base 1.1.1+dfsg
- _ZN6SeqLib17UnalignedSequenceD2Ev@Base 1.1.1+dfsg
- _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE12allocate_grcEv@Base 1.1.1+dfsg
- _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE13CreateTreeMapEv@Base 1.1.1+dfsg
- _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE14CoordinateSortEv@Base 1.1.1+dfsg
- _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE25MergeOverlappingIntervalsEv@Base 1.1.1+dfsg
- _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE6ConcatERKS2_@Base 1.1.1+dfsg
- _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE7ReadBEDERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.1+dfsg
- _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE7ReadVCFERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.1+dfsg
- _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEEC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.1+dfsg
- _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEEC1Ev@Base 1.1.1+dfsg
- _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEEC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.1+dfsg
- _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEEC2Ev@Base 1.1.1+dfsg
- _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEED1Ev@Base 1.1.1+dfsg
- _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEED2Ev@Base 1.1.1+dfsg
- _ZN6SeqLib3BFC11AddSequenceEPKcS2_S2_@Base 1.1.1+dfsg
- _ZN6SeqLib3BFC11GetSequenceERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES7_@Base 1.1.2+dfsg
- _ZN6SeqLib3BFC12ErrorCorrectEv@Base 1.1.1+dfsg
- _ZN6SeqLib3BFC13correct_readsEv@Base 1.1.1+dfsg
- _ZN6SeqLib3BFC13learn_correctEv@Base 1.1.1+dfsg
- _ZN6SeqLib3BFC15CorrectSequenceERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKS6_@Base 1.1.2+dfsg
- _ZN6SeqLib3BFC5TrainEv@Base 1.1.1+dfsg
- _ZN6SeqLib3BFC5clearEv@Base 1.1.1+dfsg
- _ZN6SeqLib4_Bam20open_BAM_for_readingEv@Base 1.1.1+dfsg
- _ZN6SeqLib4_Bam9SetRegionERKNS_13GenomicRegionE@Base 1.1.1+dfsg
- _ZN6SeqLib4_Bam9load_readERNS_9BamRecordE@Base 1.1.1+dfsg
- _ZN6SeqLib4_BamD1Ev@Base 1.1.1+dfsg
- _ZN6SeqLib4_BamD2Ev@Base 1.1.1+dfsg
- _ZN6SeqLib5CigarC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2+dfsg
- _ZN6SeqLib5CigarC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2+dfsg
- _ZN6SeqLib6Filter10ReadFilter10addRegionsERKNS_23GenomicRegionCollectionINS_13GenomicRegionEEE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter10ReadFilter10setRegionsERKNS_23GenomicRegionCollectionINS_13GenomicRegionEEE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter10ReadFilter7AddRuleERKNS0_12AbstractRuleE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter10ReadFilter7isValidERKNS_9BamRecordE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter10ReadFilterC1ERKS1_@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter10ReadFilterC2ERKS1_@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter10ReadFilterD1Ev@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter10ReadFilterD2Ev@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter11AhoCorasick12TrieFromFileERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter11AhoCorasickD1Ev@Base 1.1.2+dfsg
- _ZN6SeqLib6Filter11AhoCorasickD2Ev@Base 1.1.2+dfsg
- _ZN6SeqLib6Filter12AbstractRule12addMotifRuleERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEb@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter12AbstractRule12parseSeqLineERKN4Json5ValueE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter12AbstractRule12parseSubLineERKN4Json5ValueE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter12AbstractRule7isValidERKNS_9BamRecordE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter12AbstractRule9parseJsonERKN4Json5ValueE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter12AbstractRuleC1ERKS1_@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter12AbstractRuleC2ERKS1_@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter12AbstractRuleD1Ev@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter12AbstractRuleD2Ev@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter15convert_to_boolERKN4Json5ValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter20ReadFilterCollection13AddReadFilterERKNS0_10ReadFilterE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter20ReadFilterCollection7isValidERKNS_9BamRecordE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter20ReadFilterCollectionC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter20ReadFilterCollectionC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter4Flag9parseJsonERKN4Json5ValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter5Range9parseJsonERKN4Json5ValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter8FlagRule14parse_json_intERKN4Json5ValueE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter8FlagRule7isValidERKNS_9BamRecordE@Base 1.1.1+dfsg
- _ZN6SeqLib6Filter8FlagRule9parseJsonERKN4Json5ValueE@Base 1.1.1+dfsg
- _ZN6SeqLib6FilterlsERSoRKNS0_10ReadFilterE@Base 1.1.1+dfsg
- _ZN6SeqLib6FilterlsERSoRKNS0_12AbstractRuleE@Base 1.1.1+dfsg
- _ZN6SeqLib6FilterlsERSoRKNS0_20ReadFilterCollectionE@Base 1.1.1+dfsg
- _ZN6SeqLib6FilterlsERSoRKNS0_5RangeE@Base 1.1.1+dfsg
- _ZN6SeqLib6FilterlsERSoRKNS0_8FlagRuleE@Base 1.1.1+dfsg
- _ZN6SeqLib8tostringIiEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEET_@Base 1.1.1+dfsg
- _ZN6SeqLib8tostringIjEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEET_@Base 1.1.1+dfsg
- _ZN6SeqLib9AddCommasIiEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEET_@Base 1.1.1+dfsg
- _ZN6SeqLib9BamHeader21ConstructName2IDTableEv@Base 1.1.1+dfsg
- _ZN6SeqLib9BamHeaderC1EPK9sam_hdr_t@Base 1.1.2+dfsg
- _ZN6SeqLib9BamHeaderC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamHeaderC1ERKSt6vectorINS_14HeaderSequenceESaIS2_EE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamHeaderC2EPK9sam_hdr_t@Base 1.1.2+dfsg
- _ZN6SeqLib9BamHeaderC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamHeaderC2ERKSt6vectorINS_14HeaderSequenceESaIS2_EE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamHeaderD1Ev@Base 1.1.1+dfsg
- _ZN6SeqLib9BamHeaderD2Ev@Base 1.1.1+dfsg
- _ZN6SeqLib9BamReader13GetNextRecordERNS_9BamRecordE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamReader16SetCramReferenceERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamReader18SetMultipleRegionsERKNS_23GenomicRegionCollectionINS_13GenomicRegionEEE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamReader4OpenERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamReader4OpenERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamReader5CloseERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamReader5CloseEv@Base 1.1.1+dfsg
- _ZN6SeqLib9BamReader5ResetERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamReader5ResetEv@Base 1.1.1+dfsg
- _ZN6SeqLib9BamReader9SetRegionERKNS_13GenomicRegionE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamReaderC1Ev@Base 1.1.1+dfsg
- _ZN6SeqLib9BamReaderC2Ev@Base 1.1.1+dfsg
- _ZN6SeqLib9BamRecord11SetSequenceERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamRecord11SmartAddTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_@Base 1.1.1+dfsg
- _ZN6SeqLib9BamRecord12SetQualitiesERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEi@Base 1.1.1+dfsg
- _ZN6SeqLib9BamRecord19ClearSeqQualAndTagsEv@Base 1.1.1+dfsg
- _ZN6SeqLib9BamRecord4initEv@Base 1.1.1+dfsg
- _ZN6SeqLib9BamRecord6assignEP6bam1_t@Base 1.1.1+dfsg
- _ZN6SeqLib9BamRecord7AddZTagENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_@Base 1.1.1+dfsg
- _ZN6SeqLib9BamRecord8SetCigarERKNS_5CigarE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamRecord8SetQnameERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamRecordC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_PKNS_13GenomicRegionERKNS_5CigarE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamRecordC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_S8_PKNS_13GenomicRegionE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamRecordC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_PKNS_13GenomicRegionERKNS_5CigarE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamRecordC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_S8_PKNS_13GenomicRegionE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamWriter11WriteRecordERKNS_9BamRecordE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamWriter16SetCramReferenceERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamWriter4OpenERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamWriter5CloseEv@Base 1.1.1+dfsg
- _ZN6SeqLib9BamWriter9SetHeaderERKNS_9BamHeaderE@Base 1.1.1+dfsg
- _ZN6SeqLib9BamWriterC1Ei@Base 1.1.1+dfsg
- _ZN6SeqLib9BamWriterC2Ei@Base 1.1.1+dfsg
- _ZN6SeqLib9RefGenome9LoadIndexERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZN6SeqLib9free_charERPc@Base 1.1.1+dfsg
- _ZN6SeqLiblsERSoRKNS_10BWAWrapperE@Base 1.1.1+dfsg
- _ZN6SeqLiblsERSoRKNS_10CigarFieldE@Base 1.1.1+dfsg
- _ZN6SeqLiblsERSoRKNS_13GenomicRegionE@Base 1.1.1+dfsg
- _ZN6SeqLiblsERSoRKNS_5CigarE@Base 1.1.1+dfsg
- _ZN6SeqLiblsERSoRKNS_9BamReaderE@Base 1.1.1+dfsg
- _ZN6SeqLiblsERSoRKNS_9BamRecordE@Base 1.1.1+dfsg
- _ZN6SeqLiblsERSoRKNS_9BamWriterE@Base 1.1.1+dfsg
- _ZN9__gnu_cxx6__stoaIlicJiEEET0_PFT_PKT1_PPS3_DpT2_EPKcS5_PmS9_@Base 1.1.1+dfsg
- _ZNK6SeqLib10BWAWrapper10WriteIndexERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZNK6SeqLib10BWAWrapper11ChrIDToNameB5cxx11Ei@Base 1.1.1+dfsg
- _ZNK6SeqLib10BWAWrapper12NumSequencesEv@Base 1.1.1+dfsg
- _ZNK6SeqLib10BWAWrapper13AlignSequenceERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_RSt6vectorINS_9BamRecordESaISA_EEbdi@Base 1.1.1+dfsg
- _ZNK6SeqLib10BWAWrapper15HeaderFromIndexEv@Base 1.1.1+dfsg
- _ZNK6SeqLib10BWAWrapper18bwa_print_sam_hdr2B5cxx11EPK8bntseq_tPKc@Base 1.1.1+dfsg
- _ZNK6SeqLib10BWAWrapper24seqlib_write_pac_to_fileERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegion10GetOverlapERKS0_@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegion11PointStringB5cxx11Ev@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegion11chrToStringB5cxx11Ei@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegion19DistanceBetweenEndsERKS0_@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegion21DistanceBetweenStartsERKS0_@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegion5WidthEv@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegion7ChrNameB5cxx11ERKNS_9BamHeaderE@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegion7IsEmptyEv@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegion8ToStringB5cxx11Ev@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegioneqERKS0_@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegiongeERKS0_@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegiongtERKS0_@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegionleERKS0_@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegionltERKS0_@Base 1.1.1+dfsg
- _ZNK6SeqLib13GenomicRegionneERKS0_@Base 1.1.1+dfsg
- _ZNK6SeqLib13TIntervalTreeIimE15findOverlappingEmmRSt6vectorINS_9TIntervalIimEESaIS4_EE@Base 1.1.1+dfsg
- _ZNK6SeqLib14FermiAssembler10GetContigsB5cxx11Ev@Base 1.1.1+dfsg
- _ZNK6SeqLib14FermiAssembler12GetSequencesEv@Base 1.1.1+dfsg
- _ZNK6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE13CountOverlapsERKS1_@Base 1.1.1+dfsg
- _ZNK6SeqLib5CigareqERKS0_@Base 1.1.1+dfsg
- _ZNK6SeqLib6Filter10ReadFilter23isReadOverlappingRegionERKNS_9BamRecordE@Base 1.1.1+dfsg
- _ZNK6SeqLib6Filter11AhoCorasick9QueryTextERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZNK6SeqLib6Filter12AbstractRule7isEveryEv@Base 1.1.1+dfsg
- _ZNK6SeqLib6Filter20ReadFilterCollection13getAllRegionsEv@Base 1.1.1+dfsg
- _ZNK6SeqLib7SeqPlot20PlotAlignmentRecordsB5cxx11ERKSt6vectorINS_9BamRecordESaIS2_EE@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamHeader12NumSequencesEv@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamHeader13sam_hdr_read2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamHeader17GetSequenceLengthERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamHeader17GetSequenceLengthEi@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamHeader23GetHeaderSequenceVectorEv@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamHeader7Name2IDERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamHeader8AsStringB5cxx11Ev@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamHeader8IDtoNameB5cxx11Ei@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamReader12HeaderConcatB5cxx11Ev@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamReader12PrintRegionsB5cxx11Ev@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamReader6HeaderEv@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamRecord11CountNBasesEv@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamRecord11PositionEndEv@Base 1.1.2+dfsg
- _ZNK6SeqLib9BamRecord14GetSmartIntTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamRecord15AsGenomicRegionEv@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamRecord15PairOrientationEv@Base 1.1.2+dfsg
- _ZNK6SeqLib9BamRecord15PositionEndMateEv@Base 1.1.2+dfsg
- _ZNK6SeqLib9BamRecord15QualitySequenceB5cxx11Ev@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamRecord17GetSmartDoubleTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamRecord17GetSmartStringTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamRecord19AsGenomicRegionMateEv@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamRecord19OverlappingCoverageERKS0_@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamRecord22QualityTrimmedSequenceEiRiS1_@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamRecord26CountBWAChimericAlignmentsEv@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamRecord27CountBWASecondaryAlignmentsEv@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamRecord6GetTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERS6_@Base 1.1.2+dfsg
- _ZNK6SeqLib9BamRecord7GetZTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERS6_@Base 1.1.2+dfsg
- _ZNK6SeqLib9BamRecord8SequenceB5cxx11Ev@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamRecord9MeanPhredEv@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamWriter10BuildIndexEv@Base 1.1.1+dfsg
- _ZNK6SeqLib9BamWriter11WriteHeaderEv@Base 1.1.1+dfsg
- _ZNK6SeqLib9RefGenome11QueryRegionERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEii@Base 1.1.1+dfsg
- _ZNKSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE19_M_find_before_nodeEmRS7_m@Base 1.1.1+dfsg
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- _ZNKSt5ctypeIcE8do_widenEc@Base 1.1.1+dfsg
- _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE10_M_emplaceIJS6_IS5_S9_EEEES6_INSC_14_Node_iteratorISA_Lb0ELb1EEEbESt17integral_constantIbLb1EEDpOT_@Base 1.1.1+dfsg
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- _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE9_M_rehashEmRKm@Base 1.1.2+dfsg
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- _ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE10_M_emplaceIJS0_IiS4_EEEES0_INS7_14_Node_iteratorIS5_Lb0ELb0EEEbESt17integral_constantIbLb1EEDpOT_@Base 1.1.2+dfsg
- _ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE5clearEv@Base 1.1.1+dfsg
- _ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE9_M_rehashEmRKm@Base 1.1.1+dfsg
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- _ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIimEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEE9_M_rehashEmRKm@Base 1.1.1+dfsg
- _ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIimEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEED1Ev@Base 1.1.1+dfsg
- _ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIimEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEED2Ev@Base 1.1.1+dfsg
- _ZNSt11_Deque_baseIPN12aho_corasick5stateIcEESaIS3_EED1Ev@Base 1.1.1+dfsg
- _ZNSt11_Deque_baseIPN12aho_corasick5stateIcEESaIS3_EED2Ev@Base 1.1.1+dfsg
- _ZNSt15_Sp_counted_ptrIDnLN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base 1.1.1+dfsg
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- _ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base 1.1.1+dfsg
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- _ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EED2Ev@Base 1.1.1+dfsg
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- _ZTISt15_Sp_counted_ptrIPSt6vectorIN6SeqLib13GenomicRegionESaIS2_EELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTISt16_Sp_counted_baseILN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTISt19_Sp_counted_deleterIP11__hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTISt19_Sp_counted_deleterIP6bam1_tN6SeqLib11free_deleteESaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTISt19_Sp_counted_deleterIP7htsFile14htsFile_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTISt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTISt19_Sp_counted_deleterIP9sam_hdr_t14bam_hdr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2+dfsg
- _ZTS10idx_delete@Base 1.1.1+dfsg
- _ZTS14bam_hdr_delete@Base 1.1.1+dfsg
- _ZTS14htsFile_delete@Base 1.1.1+dfsg
- _ZTS14hts_itr_delete@Base 1.1.1+dfsg
- _ZTSN6SeqLib11free_deleteE@Base 1.1.1+dfsg
- _ZTSSt11_Mutex_baseILN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTSSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTSSt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTSSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTSSt15_Sp_counted_ptrIPSt6vectorIN6SeqLib13GenomicRegionESaIS2_EELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTSSt16_Sp_counted_baseILN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTSSt19_Sp_counted_deleterIP11__hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTSSt19_Sp_counted_deleterIP6bam1_tN6SeqLib11free_deleteESaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTSSt19_Sp_counted_deleterIP7htsFile14htsFile_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTSSt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTSSt19_Sp_counted_deleterIP9sam_hdr_t14bam_hdr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2+dfsg
- _ZTVSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTVSt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTVSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTVSt15_Sp_counted_ptrIPSt6vectorIN6SeqLib13GenomicRegionESaIS2_EELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTVSt19_Sp_counted_deleterIP11__hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTVSt19_Sp_counted_deleterIP6bam1_tN6SeqLib11free_deleteESaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTVSt19_Sp_counted_deleterIP7htsFile14htsFile_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTVSt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.1+dfsg
- _ZTVSt19_Sp_counted_deleterIP9sam_hdr_t14bam_hdr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2+dfsg
+* Build-Depends-Package: libseqlib-dev
+ (optional=templinst)_ZN12aho_corasick10basic_trieIcE10parse_textENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ (optional=templinst)_ZN12aho_corasick10basic_trieIcE24construct_failure_statesEv@Base 1.1.2
+ (optional=templinst)_ZN12aho_corasick13interval_treeINS_7ahoemitIcEEE15remove_overlapsERKSt6vectorIS2_SaIS2_EE@Base 1.1.2
+ (optional=templinst)_ZN12aho_corasick13interval_treeINS_7ahoemitIcEEE4node13find_overlapsERKS2_@Base 1.1.2
+ (optional=templinst)_ZN12aho_corasick13interval_treeINS_7ahoemitIcEEE4nodeC1ERKSt6vectorIS2_SaIS2_EE@Base 1.1.2
+ (optional=templinst)_ZN12aho_corasick13interval_treeINS_7ahoemitIcEEE4nodeC2ERKSt6vectorIS2_SaIS2_EE@Base 1.1.2
+ (optional=templinst)_ZN12aho_corasick13interval_treeINS_7ahoemitIcEEE4nodeD1Ev@Base 1.1.2
+ (optional=templinst)_ZN12aho_corasick13interval_treeINS_7ahoemitIcEEE4nodeD2Ev@Base 1.1.2
+ _ZN4Json6ReaderD1Ev@Base 1.1.2
+ _ZN4Json6ReaderD2Ev@Base 1.1.2
+ _ZN6SeqLib10BWAWrapper10SetGapOpenEi@Base 1.1.2
+ _ZN6SeqLib10BWAWrapper11SetZDropoffEi@Base 1.1.2
+ (subst)_ZN6SeqLib10BWAWrapper11seqlib_add1EPK6kseq_tP8bntseq_tPhP{int64_t}PiS8_PP9bntamb1_t@Base 1.1.2
+ _ZN6SeqLib10BWAWrapper12SetBandwidthEi@Base 1.1.2
+ _ZN6SeqLib10BWAWrapper14ConstructIndexERKSt6vectorINS_17UnalignedSequenceESaIS2_EE@Base 1.1.2
+ _ZN6SeqLib10BWAWrapper15SetGapExtensionEi@Base 1.1.2
+ _ZN6SeqLib10BWAWrapper15seqlib_make_pacERKSt6vectorINS_17UnalignedSequenceESaIS2_EEb@Base 1.1.2
+ _ZN6SeqLib10BWAWrapper16SetReseedTriggerEf@Base 1.1.2
+ _ZN6SeqLib10BWAWrapper18SetMismatchPenaltyEi@Base 1.1.2
+ (subst)_ZN6SeqLib10BWAWrapper18seqlib_add_to_annsERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_P9bntann1_t{size_t}@Base 1.1.2
+ _ZN6SeqLib10BWAWrapper18seqlib_bwt_pac2bwtEPKhi@Base 1.1.2
+ _ZN6SeqLib10BWAWrapper24Set3primeClippingPenaltyEi@Base 1.1.2
+ _ZN6SeqLib10BWAWrapper24Set5primeClippingPenaltyEi@Base 1.1.2
+ _ZN6SeqLib10BWAWrapper9LoadIndexERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib10BWAWrapper9SetAScoreEi@Base 1.1.2
+ _ZN6SeqLib10CigarFieldC1Ecj@Base 1.1.2
+ _ZN6SeqLib10CigarFieldC2Ecj@Base 1.1.2
+ _ZN6SeqLib11FastqReader15GetNextSequenceERNS_17UnalignedSequenceE@Base 1.1.2
+ _ZN6SeqLib11FastqReader4OpenERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib11FastqReaderC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib11FastqReaderC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib13GenomicRegion3PadEi@Base 1.1.2
+ _ZN6SeqLib13GenomicRegionC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.2
+ _ZN6SeqLib13GenomicRegionC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_S8_RKNS_9BamHeaderE@Base 1.1.2
+ _ZN6SeqLib13GenomicRegionC1Eiiic@Base 1.1.2
+ _ZN6SeqLib13GenomicRegionC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.2
+ _ZN6SeqLib13GenomicRegionC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_S8_RKNS_9BamHeaderE@Base 1.1.2
+ _ZN6SeqLib13GenomicRegionC2Eiiic@Base 1.1.2
+ (optional=templinst|subst)_ZN6SeqLib13TIntervalTreeIi{size_t}EC1ERKS1_@Base 1.1.2
+ (optional=templinst|subst)_ZN6SeqLib13TIntervalTreeIi{size_t}EC1ERSt6vectorINS_9TIntervalIi{size_t}EESaIS4_EE{size_t}{size_t}{size_t}{size_t}{size_t}@Base 1.1.2
+ (optional=templinst|subst)_ZN6SeqLib13TIntervalTreeIi{size_t}EC2ERKS1_@Base 1.1.2
+ (optional=templinst|subst)_ZN6SeqLib13TIntervalTreeIi{size_t}EC2ERSt6vectorINS_9TIntervalIi{size_t}EESaIS4_EE{size_t}{size_t}{size_t}{size_t}{size_t}@Base 1.1.2
+ (optional=templinst|subst)_ZN6SeqLib13TIntervalTreeIi{size_t}ED1Ev@Base 1.1.2
+ (optional=templinst|subst)_ZN6SeqLib13TIntervalTreeIi{size_t}ED2Ev@Base 1.1.2
+ _ZN6SeqLib14FermiAssembler10ClearReadsEv@Base 1.1.2
+ _ZN6SeqLib14FermiAssembler12ClearContigsEv@Base 1.1.2
+ _ZN6SeqLib14FermiAssembler12CorrectReadsEv@Base 1.1.2
+ _ZN6SeqLib14FermiAssembler14DirectAssembleEf@Base 1.1.2
+ _ZN6SeqLib14FermiAssembler15PerformAssemblyEv@Base 1.1.2
+ _ZN6SeqLib14FermiAssembler21CorrectAndFilterReadsEv@Base 1.1.2
+ _ZN6SeqLib14FermiAssembler7AddReadERKNS_17UnalignedSequenceE@Base 1.1.2
+ _ZN6SeqLib14FermiAssembler7AddReadERKNS_9BamRecordE@Base 1.1.2
+ _ZN6SeqLib14FermiAssembler8AddReadsERKSt6vectorINS_17UnalignedSequenceESaIS2_EE@Base 1.1.2
+ _ZN6SeqLib14FermiAssembler8AddReadsERKSt6vectorINS_9BamRecordESaIS2_EE@Base 1.1.2
+ _ZN6SeqLib14FermiAssemblerC1Ev@Base 1.1.2
+ _ZN6SeqLib14FermiAssemblerC2Ev@Base 1.1.2
+ _ZN6SeqLib14FermiAssemblerD1Ev@Base 1.1.2
+ _ZN6SeqLib14FermiAssemblerD2Ev@Base 1.1.2
+ _ZN6SeqLib17UnalignedSequenceD1Ev@Base 1.1.2
+ _ZN6SeqLib17UnalignedSequenceD2Ev@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE12allocate_grcEv@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE13CreateTreeMapEv@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE14CoordinateSortEv@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE25MergeOverlappingIntervalsEv@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE6ConcatERKS2_@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE7ReadBEDERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE7ReadVCFERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEEC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEEC1Ev@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEEC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEEC2Ev@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEED1Ev@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEED2Ev@Base 1.1.2
+ _ZN6SeqLib3BFC11AddSequenceEPKcS2_S2_@Base 1.1.2
+ _ZN6SeqLib3BFC11GetSequenceERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES7_@Base 1.1.2
+ _ZN6SeqLib3BFC12ErrorCorrectEv@Base 1.1.2
+ _ZN6SeqLib3BFC13correct_readsEv@Base 1.1.2
+ _ZN6SeqLib3BFC13learn_correctEv@Base 1.1.2
+ _ZN6SeqLib3BFC15CorrectSequenceERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKS6_@Base 1.1.2
+ _ZN6SeqLib3BFC5TrainEv@Base 1.1.2
+ _ZN6SeqLib3BFC5clearEv@Base 1.1.2
+ _ZN6SeqLib4_Bam20open_BAM_for_readingEv@Base 1.1.2
+ _ZN6SeqLib4_Bam9SetRegionERKNS_13GenomicRegionE@Base 1.1.2
+ _ZN6SeqLib4_Bam9load_readERNS_9BamRecordE@Base 1.1.2
+ _ZN6SeqLib4_BamD1Ev@Base 1.1.2
+ _ZN6SeqLib4_BamD2Ev@Base 1.1.2
+ _ZN6SeqLib5CigarC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib5CigarC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib6Filter10ReadFilter10addRegionsERKNS_23GenomicRegionCollectionINS_13GenomicRegionEEE@Base 1.1.2
+ _ZN6SeqLib6Filter10ReadFilter10setRegionsERKNS_23GenomicRegionCollectionINS_13GenomicRegionEEE@Base 1.1.2
+ _ZN6SeqLib6Filter10ReadFilter7AddRuleERKNS0_12AbstractRuleE@Base 1.1.2
+ _ZN6SeqLib6Filter10ReadFilter7isValidERKNS_9BamRecordE@Base 1.1.2
+ _ZN6SeqLib6Filter10ReadFilterC1ERKS1_@Base 1.1.2
+ _ZN6SeqLib6Filter10ReadFilterC2ERKS1_@Base 1.1.2
+ _ZN6SeqLib6Filter10ReadFilterD1Ev@Base 1.1.2
+ _ZN6SeqLib6Filter10ReadFilterD2Ev@Base 1.1.2
+ _ZN6SeqLib6Filter11AhoCorasick12TrieFromFileERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib6Filter11AhoCorasickD1Ev@Base 1.1.2
+ _ZN6SeqLib6Filter11AhoCorasickD2Ev@Base 1.1.2
+ _ZN6SeqLib6Filter12AbstractRule12addMotifRuleERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEb@Base 1.1.2
+ _ZN6SeqLib6Filter12AbstractRule12parseSeqLineERKN4Json5ValueE@Base 1.1.2
+ _ZN6SeqLib6Filter12AbstractRule12parseSubLineERKN4Json5ValueE@Base 1.1.2
+ _ZN6SeqLib6Filter12AbstractRule7isValidERKNS_9BamRecordE@Base 1.1.2
+ _ZN6SeqLib6Filter12AbstractRule9parseJsonERKN4Json5ValueE@Base 1.1.2
+ _ZN6SeqLib6Filter12AbstractRuleC1ERKS1_@Base 1.1.2
+ _ZN6SeqLib6Filter12AbstractRuleC2ERKS1_@Base 1.1.2
+ _ZN6SeqLib6Filter12AbstractRuleD1Ev@Base 1.1.2
+ _ZN6SeqLib6Filter12AbstractRuleD2Ev@Base 1.1.2
+ _ZN6SeqLib6Filter15convert_to_boolERKN4Json5ValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib6Filter20ReadFilterCollection13AddReadFilterERKNS0_10ReadFilterE@Base 1.1.2
+ _ZN6SeqLib6Filter20ReadFilterCollection7isValidERKNS_9BamRecordE@Base 1.1.2
+ _ZN6SeqLib6Filter20ReadFilterCollectionC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.2
+ _ZN6SeqLib6Filter20ReadFilterCollectionC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.2
+ _ZN6SeqLib6Filter4Flag9parseJsonERKN4Json5ValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib6Filter5Range9parseJsonERKN4Json5ValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib6Filter8FlagRule14parse_json_intERKN4Json5ValueE@Base 1.1.2
+ _ZN6SeqLib6Filter8FlagRule7isValidERKNS_9BamRecordE@Base 1.1.2
+ _ZN6SeqLib6Filter8FlagRule9parseJsonERKN4Json5ValueE@Base 1.1.2
+ _ZN6SeqLib6FilterlsERSoRKNS0_10ReadFilterE@Base 1.1.2
+ _ZN6SeqLib6FilterlsERSoRKNS0_12AbstractRuleE@Base 1.1.2
+ _ZN6SeqLib6FilterlsERSoRKNS0_20ReadFilterCollectionE@Base 1.1.2
+ _ZN6SeqLib6FilterlsERSoRKNS0_5RangeE@Base 1.1.2
+ _ZN6SeqLib6FilterlsERSoRKNS0_8FlagRuleE@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib8tostringIiEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEET_@Base 1.1.2
+ (optional=templinst)_ZN6SeqLib8tostringIjEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEET_@Base 1.1.2
+ (optional=templinst|arch=amd64 arm64 mips64el ppc64el riscv64)_ZN6SeqLib9AddCommasIiEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEET_@Base 1.1.2
+ _ZN6SeqLib9BamHeader21ConstructName2IDTableEv@Base 1.1.2
+ _ZN6SeqLib9BamHeaderC1EPK9sam_hdr_t@Base 1.1.2
+ _ZN6SeqLib9BamHeaderC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib9BamHeaderC1ERKSt6vectorINS_14HeaderSequenceESaIS2_EE@Base 1.1.2
+ _ZN6SeqLib9BamHeaderC2EPK9sam_hdr_t@Base 1.1.2
+ _ZN6SeqLib9BamHeaderC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib9BamHeaderC2ERKSt6vectorINS_14HeaderSequenceESaIS2_EE@Base 1.1.2
+ _ZN6SeqLib9BamHeaderD1Ev@Base 1.1.2
+ _ZN6SeqLib9BamHeaderD2Ev@Base 1.1.2
+ _ZN6SeqLib9BamReader13GetNextRecordERNS_9BamRecordE@Base 1.1.2
+ _ZN6SeqLib9BamReader16SetCramReferenceERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib9BamReader18SetMultipleRegionsERKNS_23GenomicRegionCollectionINS_13GenomicRegionEEE@Base 1.1.2
+ _ZN6SeqLib9BamReader4OpenERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib9BamReader4OpenERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EE@Base 1.1.2
+ _ZN6SeqLib9BamReader5CloseERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib9BamReader5CloseEv@Base 1.1.2
+ _ZN6SeqLib9BamReader5ResetERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib9BamReader5ResetEv@Base 1.1.2
+ _ZN6SeqLib9BamReader9SetRegionERKNS_13GenomicRegionE@Base 1.1.2
+ _ZN6SeqLib9BamReaderC1Ev@Base 1.1.2
+ _ZN6SeqLib9BamReaderC2Ev@Base 1.1.2
+ _ZN6SeqLib9BamRecord11SetSequenceERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib9BamRecord11SmartAddTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_@Base 1.1.2
+ _ZN6SeqLib9BamRecord12SetQualitiesERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEi@Base 1.1.2
+ _ZN6SeqLib9BamRecord19ClearSeqQualAndTagsEv@Base 1.1.2
+ _ZN6SeqLib9BamRecord4initEv@Base 1.1.2
+ _ZN6SeqLib9BamRecord6assignEP6bam1_t@Base 1.1.2
+ _ZN6SeqLib9BamRecord7AddZTagENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_@Base 1.1.2
+ _ZN6SeqLib9BamRecord8SetCigarERKNS_5CigarE@Base 1.1.2
+ _ZN6SeqLib9BamRecord8SetQnameERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib9BamRecordC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_PKNS_13GenomicRegionERKNS_5CigarE@Base 1.1.2
+ _ZN6SeqLib9BamRecordC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_S8_PKNS_13GenomicRegionE@Base 1.1.2
+ _ZN6SeqLib9BamRecordC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_PKNS_13GenomicRegionERKNS_5CigarE@Base 1.1.2
+ _ZN6SeqLib9BamRecordC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_S8_PKNS_13GenomicRegionE@Base 1.1.2
+ _ZN6SeqLib9BamWriter11WriteRecordERKNS_9BamRecordE@Base 1.1.2
+ _ZN6SeqLib9BamWriter16SetCramReferenceERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib9BamWriter4OpenERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib9BamWriter5CloseEv@Base 1.1.2
+ _ZN6SeqLib9BamWriter9SetHeaderERKNS_9BamHeaderE@Base 1.1.2
+ _ZN6SeqLib9BamWriterC1Ei@Base 1.1.2
+ _ZN6SeqLib9BamWriterC2Ei@Base 1.1.2
+ _ZN6SeqLib9RefGenome9LoadIndexERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZN6SeqLib9free_charERPc@Base 1.1.2
+ _ZN6SeqLiblsERSoRKNS_10BWAWrapperE@Base 1.1.2
+ _ZN6SeqLiblsERSoRKNS_10CigarFieldE@Base 1.1.2
+ _ZN6SeqLiblsERSoRKNS_13GenomicRegionE@Base 1.1.2
+ _ZN6SeqLiblsERSoRKNS_5CigarE@Base 1.1.2
+ _ZN6SeqLiblsERSoRKNS_9BamReaderE@Base 1.1.2
+ _ZN6SeqLiblsERSoRKNS_9BamRecordE@Base 1.1.2
+ _ZN6SeqLiblsERSoRKNS_9BamWriterE@Base 1.1.2
+ (optional=templinst|subst)_ZN9__gnu_cxx6__stoaIlicJiEEET0_PFT_PKT1_PPS3_DpT2_EPKcS5_P{size_t}S9_@Base 1.1.2
+ _ZNK6SeqLib10BWAWrapper10WriteIndexERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZNK6SeqLib10BWAWrapper11ChrIDToNameB5cxx11Ei@Base 1.1.2
+ _ZNK6SeqLib10BWAWrapper12NumSequencesEv@Base 1.1.2
+ _ZNK6SeqLib10BWAWrapper13AlignSequenceERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_RSt6vectorINS_9BamRecordESaISA_EEbdi@Base 1.1.2
+ _ZNK6SeqLib10BWAWrapper15HeaderFromIndexEv@Base 1.1.2
+ _ZNK6SeqLib10BWAWrapper18bwa_print_sam_hdr2B5cxx11EPK8bntseq_tPKc@Base 1.1.2
+ _ZNK6SeqLib10BWAWrapper24seqlib_write_pac_to_fileERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegion10GetOverlapERKS0_@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegion11PointStringB5cxx11Ev@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegion11chrToStringB5cxx11Ei@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegion19DistanceBetweenEndsERKS0_@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegion21DistanceBetweenStartsERKS0_@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegion5WidthEv@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegion7ChrNameB5cxx11ERKNS_9BamHeaderE@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegion7IsEmptyEv@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegion8ToStringB5cxx11Ev@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegioneqERKS0_@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegiongeERKS0_@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegiongtERKS0_@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegionleERKS0_@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegionltERKS0_@Base 1.1.2
+ _ZNK6SeqLib13GenomicRegionneERKS0_@Base 1.1.2
+ (optional=templinst|subst)_ZNK6SeqLib13TIntervalTreeIi{size_t}E15findOverlappingE{size_t}{size_t}RSt6vectorINS_9TIntervalIi{size_t}EESaIS4_EE@Base 1.1.2
+ _ZNK6SeqLib14FermiAssembler10GetContigsB5cxx11Ev@Base 1.1.2
+ _ZNK6SeqLib14FermiAssembler12GetSequencesEv@Base 1.1.2
+ (optional=templinst)_ZNK6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE13CountOverlapsERKS1_@Base 1.1.2
+ _ZNK6SeqLib5CigareqERKS0_@Base 1.1.2
+ _ZNK6SeqLib6Filter10ReadFilter23isReadOverlappingRegionERKNS_9BamRecordE@Base 1.1.2
+ _ZNK6SeqLib6Filter11AhoCorasick9QueryTextERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZNK6SeqLib6Filter12AbstractRule7isEveryEv@Base 1.1.2
+ _ZNK6SeqLib6Filter20ReadFilterCollection13getAllRegionsEv@Base 1.1.2
+ _ZNK6SeqLib7SeqPlot20PlotAlignmentRecordsB5cxx11ERKSt6vectorINS_9BamRecordESaIS2_EE@Base 1.1.2
+ _ZNK6SeqLib9BamHeader12NumSequencesEv@Base 1.1.2
+ _ZNK6SeqLib9BamHeader13sam_hdr_read2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZNK6SeqLib9BamHeader17GetSequenceLengthERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZNK6SeqLib9BamHeader17GetSequenceLengthEi@Base 1.1.2
+ _ZNK6SeqLib9BamHeader23GetHeaderSequenceVectorEv@Base 1.1.2
+ _ZNK6SeqLib9BamHeader7Name2IDERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZNK6SeqLib9BamHeader8AsStringB5cxx11Ev@Base 1.1.2
+ _ZNK6SeqLib9BamHeader8IDtoNameB5cxx11Ei@Base 1.1.2
+ _ZNK6SeqLib9BamReader12HeaderConcatB5cxx11Ev@Base 1.1.2
+ _ZNK6SeqLib9BamReader12PrintRegionsB5cxx11Ev@Base 1.1.2
+ _ZNK6SeqLib9BamReader6HeaderEv@Base 1.1.2
+ _ZNK6SeqLib9BamRecord11CountNBasesEv@Base 1.1.2
+ _ZNK6SeqLib9BamRecord11PositionEndEv@Base 1.1.2
+ _ZNK6SeqLib9BamRecord14GetSmartIntTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZNK6SeqLib9BamRecord15AsGenomicRegionEv@Base 1.1.2
+ _ZNK6SeqLib9BamRecord15PairOrientationEv@Base 1.1.2
+ _ZNK6SeqLib9BamRecord15PositionEndMateEv@Base 1.1.2
+ _ZNK6SeqLib9BamRecord15QualitySequenceB5cxx11Ev@Base 1.1.2
+ _ZNK6SeqLib9BamRecord17GetSmartDoubleTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZNK6SeqLib9BamRecord17GetSmartStringTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2
+ _ZNK6SeqLib9BamRecord19AsGenomicRegionMateEv@Base 1.1.2
+ _ZNK6SeqLib9BamRecord19OverlappingCoverageERKS0_@Base 1.1.2
+ _ZNK6SeqLib9BamRecord22QualityTrimmedSequenceEiRiS1_@Base 1.1.2
+ _ZNK6SeqLib9BamRecord26CountBWAChimericAlignmentsEv@Base 1.1.2
+ _ZNK6SeqLib9BamRecord27CountBWASecondaryAlignmentsEv@Base 1.1.2
+ _ZNK6SeqLib9BamRecord6GetTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERS6_@Base 1.1.2
+ _ZNK6SeqLib9BamRecord7GetZTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERS6_@Base 1.1.2
+ _ZNK6SeqLib9BamRecord8SequenceB5cxx11Ev@Base 1.1.2
+ _ZNK6SeqLib9BamRecord9MeanPhredEv@Base 1.1.2
+ _ZNK6SeqLib9BamWriter10BuildIndexEv@Base 1.1.2
+ _ZNK6SeqLib9BamWriter11WriteHeaderEv@Base 1.1.2
+ _ZNK6SeqLib9RefGenome11QueryRegionERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEii@Base 1.1.2
+ (optional=templinst|subst)_ZNKSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE19_M_find_before_nodeE{size_t}RS7_{size_t}@Base 1.1.2
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+ (optional=templinst)_ZNKSt5ctypeIcE8do_widenEc@Base 1.1.2
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+ (optional=templinst|subst)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE9_M_rehashE{size_t}RK{size_t}@Base 1.1.2
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+ (optional=templinst|arch=armel armhf)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIijEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE21_M_insert_unique_nodeEjjPNS7_10_Hash_nodeIS5_Lb0EEEj@Base 1.1.2
+ (optional=templinst|arch=amd64 arm64 mips64el ppc64el riscv64)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE10_M_emplaceIJS0_IiS4_EEEES0_INS7_14_Node_iteratorIS5_Lb0ELb0EEEbESt17integral_constantIbLb1EEDpOT_@Base 1.1.2
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+ (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIi{size_t}EEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE5clearEv@Base 1.1.2
+ (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIi{size_t}EEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE9_M_rehashE{size_t}RK{size_t}@Base 1.1.2
+ (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIi{size_t}EEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEED1Ev@Base 1.1.2
+ (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIi{size_t}EEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEED2Ev@Base 1.1.2
+ (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIi{size_t}EESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEE9_M_rehashE{size_t}RK{size_t}@Base 1.1.2
+ (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIi{size_t}EESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEED1Ev@Base 1.1.2
+ (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIi{size_t}EESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEED2Ev@Base 1.1.2
+ (optional=templinst)_ZNSt11_Deque_baseIPN12aho_corasick5stateIcEESaIS3_EED1Ev@Base 1.1.2
+ (optional=templinst)_ZNSt11_Deque_baseIPN12aho_corasick5stateIcEESaIS3_EED2Ev@Base 1.1.2
+ (optional=templinst|arch=armel riscv64)_ZNSt15_Sp_counted_ptrIDnLN9__gnu_cxx12_Lock_policyE1EE10_M_disposeEv@Base 1.1.2
+ (optional=templinst|arch=!armel !riscv64)_ZNSt15_Sp_counted_ptrIDnLN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base 1.1.2
+ (optional=templinst|arch=armel riscv64)_ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE1EE10_M_destroyEv@Base 1.1.2
+ (optional=templinst|arch=armel riscv64)_ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE1EE10_M_disposeEv@Base 1.1.2
+ (optional=templinst|arch=armel riscv64)_ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE1EE14_M_get_deleterERKSt9type_info@Base 1.1.2
+ (optional=templinst|arch=armel riscv64)_ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE1EED0Ev@Base 1.1.2
+ (optional=templinst|arch=armel riscv64)_ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE1EED1Ev@Base 1.1.2
+ (optional=templinst|arch=armel riscv64)_ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE1EED2Ev@Base 1.1.2
+ (optional=templinst|arch=!armel !riscv64)_ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EE10_M_destroyEv@Base 1.1.2
+ (optional=templinst|arch=!armel !riscv64)_ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base 1.1.2
+ (optional=templinst|arch=!armel !riscv64)_ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EE14_M_get_deleterERKSt9type_info@Base 1.1.2
+ (optional=templinst|arch=!armel !riscv64)_ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EED0Ev@Base 1.1.2
+ (optional=templinst|arch=!armel !riscv64)_ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EED1Ev@Base 1.1.2
+ (optional=templinst|arch=!armel !riscv64)_ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EED2Ev@Base 1.1.2
+ (optional=templinst|arch=armel riscv64)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE1EE10_M_destroyEv@Base 1.1.2
+ (optional=templinst|arch=armel riscv64)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE1EE10_M_disposeEv@Base 1.1.2
+ (optional=templinst|arch=armel riscv64)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE1EE14_M_get_deleterERKSt9type_info@Base 1.1.2
+ (optional=templinst|arch=armel riscv64)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE1EED0Ev@Base 1.1.2
+ (optional=templinst|arch=armel riscv64)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE1EED1Ev@Base 1.1.2
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+ (arch=armel riscv64)_ZTISt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTISt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTISt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTISt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel)_ZTISt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIijEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=riscv64)_ZTISt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (subst|arch=!armel !riscv64)_ZTISt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIi{size_t}EESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTISt15_Sp_counted_ptrIPSt6vectorIN6SeqLib13GenomicRegionESaIS2_EELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTISt15_Sp_counted_ptrIPSt6vectorIN6SeqLib13GenomicRegionESaIS2_EELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTISt16_Sp_counted_baseILN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTISt16_Sp_counted_baseILN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTISt19_Sp_counted_deleterIP11__hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTISt19_Sp_counted_deleterIP11__hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTISt19_Sp_counted_deleterIP6bam1_tN6SeqLib11free_deleteESaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTISt19_Sp_counted_deleterIP6bam1_tN6SeqLib11free_deleteESaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTISt19_Sp_counted_deleterIP7htsFile14htsFile_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTISt19_Sp_counted_deleterIP7htsFile14htsFile_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTISt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTISt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTISt19_Sp_counted_deleterIP9sam_hdr_t14bam_hdr_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTISt19_Sp_counted_deleterIP9sam_hdr_t14bam_hdr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ _ZTS10idx_delete@Base 1.1.2
+ _ZTS14bam_hdr_delete@Base 1.1.2
+ _ZTS14htsFile_delete@Base 1.1.2
+ _ZTS14hts_itr_delete@Base 1.1.2
+ _ZTSN6SeqLib11free_deleteE@Base 1.1.2
+ (arch=armel riscv64)_ZTSN9__gnu_cxx7__mutexE@Base 1.1.2
+ (arch=armel riscv64)_ZTSSt11_Mutex_baseILN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTSSt11_Mutex_baseILN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTSSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTSSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTSSt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTSSt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel)_ZTSSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIijEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=riscv64)_ZTSSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (subst|arch=!armel !riscv64)_ZTSSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIi{size_t}EESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTSSt15_Sp_counted_ptrIPSt6vectorIN6SeqLib13GenomicRegionESaIS2_EELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTSSt15_Sp_counted_ptrIPSt6vectorIN6SeqLib13GenomicRegionESaIS2_EELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTSSt16_Sp_counted_baseILN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTSSt16_Sp_counted_baseILN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTSSt19_Sp_counted_deleterIP11__hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTSSt19_Sp_counted_deleterIP11__hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTSSt19_Sp_counted_deleterIP6bam1_tN6SeqLib11free_deleteESaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTSSt19_Sp_counted_deleterIP6bam1_tN6SeqLib11free_deleteESaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTSSt19_Sp_counted_deleterIP7htsFile14htsFile_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTSSt19_Sp_counted_deleterIP7htsFile14htsFile_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTSSt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTSSt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTSSt19_Sp_counted_deleterIP9sam_hdr_t14bam_hdr_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTSSt19_Sp_counted_deleterIP9sam_hdr_t14bam_hdr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTVSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTVSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTVSt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTVSt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel)_ZTVSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIijEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=riscv64)_ZTVSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (subst|arch=!armel !riscv64)_ZTVSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIi{size_t}EESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTVSt15_Sp_counted_ptrIPSt6vectorIN6SeqLib13GenomicRegionESaIS2_EELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTVSt15_Sp_counted_ptrIPSt6vectorIN6SeqLib13GenomicRegionESaIS2_EELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTVSt19_Sp_counted_deleterIP11__hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTVSt19_Sp_counted_deleterIP11__hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTVSt19_Sp_counted_deleterIP6bam1_tN6SeqLib11free_deleteESaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTVSt19_Sp_counted_deleterIP6bam1_tN6SeqLib11free_deleteESaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTVSt19_Sp_counted_deleterIP7htsFile14htsFile_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTVSt19_Sp_counted_deleterIP7htsFile14htsFile_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTVSt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTVSt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
+ (arch=armel riscv64)_ZTVSt19_Sp_counted_deleterIP9sam_hdr_t14bam_hdr_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE@Base 1.1.2
+ (arch=!armel !riscv64)_ZTVSt19_Sp_counted_deleterIP9sam_hdr_t14bam_hdr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.1.2
diff -Nru libseqlib-1.1.2+dfsg/debian/libseqlib-dev.lintian-overrides libseqlib-1.1.2+dfsg/debian/libseqlib-dev.lintian-overrides
--- libseqlib-1.1.2+dfsg/debian/libseqlib-dev.lintian-overrides	2019-12-18 13:17:13.000000000 +0000
+++ libseqlib-1.1.2+dfsg/debian/libseqlib-dev.lintian-overrides	2020-02-15 16:39:28.000000000 +0000
@@ -1,5 +1,2 @@
 # Libraries are specified in Depends
-libseqlib-dev: pkg-config-references-unknown-shared-library usr/lib/*/pkgconfig/libseqlib.pc -lfml (line 9)
 libseqlib-dev: pkg-config-references-unknown-shared-library usr/lib/*/pkgconfig/libseqlib.pc -lbwa (line 9)
-libseqlib-dev: pkg-config-references-unknown-shared-library usr/lib/*/pkgconfig/libseqlib.pc -lssw (line 9)
-libseqlib-dev: pkg-config-references-unknown-shared-library usr/lib/*/pkgconfig/libseqlib.pc -lz (line 9)
diff -Nru libseqlib-1.1.2+dfsg/debian/patches/dynamic_lib.patch libseqlib-1.1.2+dfsg/debian/patches/dynamic_lib.patch
--- libseqlib-1.1.2+dfsg/debian/patches/dynamic_lib.patch	2019-12-18 13:17:13.000000000 +0000
+++ libseqlib-1.1.2+dfsg/debian/patches/dynamic_lib.patch	2020-02-15 16:59:45.000000000 +0000
@@ -2,8 +2,8 @@
 Last-Update: Fri, 27 Jan 2017 13:18:48 +0100
 Description: Create dynamic library
 
---- a/src/Makefile.am
-+++ b/src/Makefile.am
+--- libseqlib.orig/src/Makefile.am
++++ libseqlib/src/Makefile.am
 @@ -1,7 +1,8 @@
 -noinst_LIBRARIES = libseqlib.a
 +lib_LTLIBRARIES  = libseqlib.la
@@ -15,10 +15,10 @@
 +libseqlib_la_SOURCES =   FastqReader.cpp BFC.cpp ReadFilter.cpp SeqPlot.cpp jsoncpp.cpp ssw_cpp.cpp ssw.c \
  			GenomicRegion.cpp RefGenome.cpp BamWriter.cpp BamReader.cpp \
  			BWAWrapper.cpp BamRecord.cpp FermiAssembler.cpp BamHeader.cpp
-+libseqlib_la_LDFLAGS = -version-info @LIB_VERSION@
---- a/configure.ac
-+++ b/configure.ac
-@@ -7,10 +7,16 @@ AC_CONFIG_HEADER([config.h])
++libseqlib_la_LDFLAGS = -version-info @LIB_VERSION@ -lfml `@PKG_CONFIG@ --libs htslib`
+--- libseqlib.orig/configure.ac
++++ libseqlib/configure.ac
+@@ -7,10 +7,16 @@
  AM_MAINTAINER_MODE([disable])
  ##m4_include([m4/m4_ax_openmp.m4])
  
@@ -35,3 +35,12 @@
  
  # Check for headers
  AC_LANG([C++])
+@@ -30,6 +36,8 @@
+     fail_on_warning="-Werror"
+ fi
+ 
++PKG_CHECK_MODULES([hts], [htslib])
++
+ # Set compiler flags.
+ AC_SUBST(AM_CXXFLAGS, "-g $fail_on_warning -Wno-unknown-pragmas")
+ AC_SUBST(CXXFLAGS, "$CXXFLAGS")
diff -Nru libseqlib-1.1.2+dfsg/debian/patches/pkg-config.patch libseqlib-1.1.2+dfsg/debian/patches/pkg-config.patch
--- libseqlib-1.1.2+dfsg/debian/patches/pkg-config.patch	2019-12-18 13:17:13.000000000 +0000
+++ libseqlib-1.1.2+dfsg/debian/patches/pkg-config.patch	2020-02-15 16:59:51.000000000 +0000
@@ -3,7 +3,7 @@
 Description: Add pkg-config file
 
 --- /dev/null
-+++ b/libseqlib.pc.in
++++ libseqlib/libseqlib.pc.in
 @@ -0,0 +1,11 @@
 +prefix=@prefix@
 +exec_prefix=${prefix}
@@ -13,12 +13,12 @@
 +Name: libseqlib
 +Version: @VERSION@
 +Description: C++ htslib/bwa-mem/fermi interface for interrogating sequence data
-+Libs: -L${libdir} -lseqlib -lfml -lbwa -lssw -lz
++Libs: -L${libdir} -lseqlib -lbwa
 +Cflags: -I${includedir}
 +
---- a/Makefile.am
-+++ b/Makefile.am
-@@ -6,3 +6,7 @@ install:
+--- libseqlib.orig/Makefile.am
++++ libseqlib/Makefile.am
+@@ -6,3 +6,7 @@
  
  seqtools:
  	mkdir -p bin && cd src/seqtools && make && mv seqtools ../../bin
@@ -26,9 +26,9 @@
 +pkgconfigdir=$(libdir)/pkgconfig
 +pkgconfig_DATA = libseqlib.pc
 +
---- a/configure.ac
-+++ b/configure.ac
-@@ -47,6 +47,8 @@ AC_SUBST(LIBS, "$LIBS -pthread")
+--- libseqlib.orig/configure.ac
++++ libseqlib/configure.ac
+@@ -49,6 +49,8 @@
  
  AC_CONFIG_FILES([Makefile
  	         src/Makefile
diff -Nru libseqlib-1.1.2+dfsg/debian/patches/use_debian_packaged_jsoncpp.patch libseqlib-1.1.2+dfsg/debian/patches/use_debian_packaged_jsoncpp.patch
--- libseqlib-1.1.2+dfsg/debian/patches/use_debian_packaged_jsoncpp.patch	2019-12-18 13:17:13.000000000 +0000
+++ libseqlib-1.1.2+dfsg/debian/patches/use_debian_packaged_jsoncpp.patch	2020-02-15 16:50:35.000000000 +0000
@@ -2,22 +2,23 @@
 Last-Update: Fri, 27 Jan 2017 13:18:48 +0100
 Description: Do not use code copy of jsoncpp
 
---- a/src/Makefile.am
-+++ b/src/Makefile.am
+--- libseqlib.orig/src/Makefile.am
++++ libseqlib/src/Makefile.am
 @@ -1,8 +1,8 @@
  lib_LTLIBRARIES  = libseqlib.la
  
 -libseqlib_la_CPPFLAGS = -I/usr/include -I/usr/include/htslib -I/usr/include/fml -Wno-sign-compare
-+libseqlib_la_CPPFLAGS = -I/usr/include -I/usr/include/htslib -I/usr/include/fml `pkg-config --cflags jsoncpp` -Wno-sign-compare
++libseqlib_la_CPPFLAGS = -I/usr/include -I/usr/include/htslib -I/usr/include/fml `@PKG_CONFIG@ --cflags jsoncpp` -Wno-sign-compare
  
 -libseqlib_la_SOURCES =   FastqReader.cpp BFC.cpp ReadFilter.cpp SeqPlot.cpp jsoncpp.cpp ssw_cpp.cpp ssw.c \
 +libseqlib_la_SOURCES =   FastqReader.cpp BFC.cpp ReadFilter.cpp SeqPlot.cpp ssw_cpp.cpp ssw.c \
  			GenomicRegion.cpp RefGenome.cpp BamWriter.cpp BamReader.cpp \
  			BWAWrapper.cpp BamRecord.cpp FermiAssembler.cpp BamHeader.cpp
- libseqlib_la_LDFLAGS = -version-info @LIB_VERSION@
---- a/seq_test/Makefile.am
-+++ b/seq_test/Makefile.am
-@@ -17,4 +17,4 @@ seq_test_SOURCES = seq_test.cpp \
+-libseqlib_la_LDFLAGS = -version-info @LIB_VERSION@ -lfml `@PKG_CONFIG@ --libs htslib`
++libseqlib_la_LDFLAGS = -version-info @LIB_VERSION@ -lfml `@PKG_CONFIG@ --libs htslib` `@PKG_CONFIG@ --libs jsoncpp`
+--- libseqlib.orig/seq_test/Makefile.am
++++ libseqlib/seq_test/Makefile.am
+@@ -17,4 +17,4 @@
  	../src/ReadFilter.cpp ../src/BamRecord.cpp \
  	../src/BWAWrapper.cpp \
          ../src/RefGenome.cpp ../src/SeqPlot.cpp ../src/BamHeader.cpp \
diff -Nru libseqlib-1.1.2+dfsg/debian/patches/use_debian_packaged_ssw.patch libseqlib-1.1.2+dfsg/debian/patches/use_debian_packaged_ssw.patch
--- libseqlib-1.1.2+dfsg/debian/patches/use_debian_packaged_ssw.patch	2019-12-18 13:17:13.000000000 +0000
+++ libseqlib-1.1.2+dfsg/debian/patches/use_debian_packaged_ssw.patch	2020-02-15 16:51:04.000000000 +0000
@@ -2,27 +2,28 @@
 Last-Update: Fri, 27 Jan 2017 13:18:48 +0100
 Description: Do not use code copy of libssw
 
---- a/seq_test/Makefile.am
-+++ b/seq_test/Makefile.am
-@@ -17,4 +17,4 @@ seq_test_SOURCES = seq_test.cpp \
+--- libseqlib.orig/seq_test/Makefile.am
++++ libseqlib/seq_test/Makefile.am
+@@ -17,4 +17,4 @@
  	../src/ReadFilter.cpp ../src/BamRecord.cpp \
  	../src/BWAWrapper.cpp \
          ../src/RefGenome.cpp ../src/SeqPlot.cpp ../src/BamHeader.cpp \
 -	../src/FermiAssembler.cpp ../src/ssw_cpp.cpp ../src/ssw.c
 +	../src/FermiAssembler.cpp
---- a/src/Makefile.am
-+++ b/src/Makefile.am
-@@ -2,7 +2,7 @@ lib_LTLIBRARIES  = libseqlib.la
+--- libseqlib.orig/src/Makefile.am
++++ libseqlib/src/Makefile.am
+@@ -2,7 +2,7 @@
  
- libseqlib_la_CPPFLAGS = -I/usr/include -I/usr/include/htslib -I/usr/include/fml `pkg-config --cflags jsoncpp` -Wno-sign-compare
+ libseqlib_la_CPPFLAGS = -I/usr/include -I/usr/include/htslib -I/usr/include/fml `@PKG_CONFIG@ --cflags jsoncpp` -Wno-sign-compare
  
 -libseqlib_la_SOURCES =   FastqReader.cpp BFC.cpp ReadFilter.cpp SeqPlot.cpp ssw_cpp.cpp ssw.c \
 +libseqlib_la_SOURCES =   FastqReader.cpp BFC.cpp ReadFilter.cpp SeqPlot.cpp \
  			GenomicRegion.cpp RefGenome.cpp BamWriter.cpp BamReader.cpp \
  			BWAWrapper.cpp BamRecord.cpp FermiAssembler.cpp BamHeader.cpp
- libseqlib_la_LDFLAGS = -version-info @LIB_VERSION@
---- a/src/BamRecord.cpp
-+++ b/src/BamRecord.cpp
+-libseqlib_la_LDFLAGS = -version-info @LIB_VERSION@ -lfml `@PKG_CONFIG@ --libs htslib` `@PKG_CONFIG@ --libs jsoncpp`
++libseqlib_la_LDFLAGS = -version-info @LIB_VERSION@ -lfml `@PKG_CONFIG@ --libs htslib` `@PKG_CONFIG@ --libs jsoncpp` -lssw
+--- libseqlib.orig/src/BamRecord.cpp
++++ libseqlib/src/BamRecord.cpp
 @@ -5,7 +5,7 @@
  #include <cctype>
  #include <stdexcept>
diff -Nru libseqlib-1.1.2+dfsg/debian/rules libseqlib-1.1.2+dfsg/debian/rules
--- libseqlib-1.1.2+dfsg/debian/rules	2019-12-18 13:17:13.000000000 +0000
+++ libseqlib-1.1.2+dfsg/debian/rules	2020-02-15 17:13:39.000000000 +0000
@@ -7,7 +7,7 @@
 export DEB_BUILD_MAINT_OPTIONS=hardening=+all
 
 %:
-	dh $@
+	dh $@ --with pkgkde_symbolshelper
 
 override_dh_install:
 	dh_install
@@ -18,6 +18,8 @@
 		    --devunversioned \
 		    --exclude-la \
 		    --movedev debian/SeqLib usr/include \
+		    --override s/libfml0-dev/libfml-dev/ \
+		    --override s/libssw0-dev/libssw-dev/ \
                     src/.libs/$(DEB_SOURCE).so
 	mkdir -p $(CURDIR)/debian/libseqlib-dev/usr/lib/$(DEB_HOST_MULTIARCH)/pkgconfig
 	mv libseqlib.pc $(CURDIR)/debian/libseqlib-dev/usr/lib/$(DEB_HOST_MULTIARCH)/pkgconfig
diff -Nru libseqlib-1.1.2+dfsg/debian/upstream/metadata libseqlib-1.1.2+dfsg/debian/upstream/metadata
--- libseqlib-1.1.2+dfsg/debian/upstream/metadata	2019-12-18 13:17:13.000000000 +0000
+++ libseqlib-1.1.2+dfsg/debian/upstream/metadata	2020-02-15 14:21:40.000000000 +0000
@@ -1,8 +1,7 @@
 Reference:
   Author: Jeremiah Wala and Rameen Beroukhim
-  Title: >
-    SeqLib: a C ++ API for rapid BAM manipulation, sequence alignment and
-    sequence assembly
+  Title: "SeqLib: a C ++ API for rapid BAM manipulation, sequence alignment and sequence\
+    \ assembly\n"
   Journal: Bioinformatics
   Year: 2016
   DOI: 10.1093/bioinformatics/btw741
@@ -16,3 +15,4 @@
 - Name: bio.tools
   Entry: NA
 Bug-Database: https://github.com/walaj/SeqLib/issues
+Bug-Submit: jwala@broadinstitute.org