diff -Nru r-bioc-affyio-1.44.0/configure r-bioc-affyio-1.48.0/configure
--- r-bioc-affyio-1.44.0/configure	2016-10-17 20:23:25.000000000 +0000
+++ r-bioc-affyio-1.48.0/configure	2017-10-30 22:37:03.000000000 +0000
@@ -1,18 +1,20 @@
 #! /bin/sh
 # Guess values for system-dependent variables and create Makefiles.
-# Generated by GNU Autoconf 2.63.
+# Generated by GNU Autoconf 2.69.
+#
+#
+# Copyright (C) 1992-1996, 1998-2012 Free Software Foundation, Inc.
+#
 #
-# Copyright (C) 1992, 1993, 1994, 1995, 1996, 1998, 1999, 2000, 2001,
-# 2002, 2003, 2004, 2005, 2006, 2007, 2008 Free Software Foundation, Inc.
 # This configure script is free software; the Free Software Foundation
 # gives unlimited permission to copy, distribute and modify it.
-## --------------------- ##
-## M4sh Initialization.  ##
-## --------------------- ##
+## -------------------- ##
+## M4sh Initialization. ##
+## -------------------- ##
 
 # Be more Bourne compatible
 DUALCASE=1; export DUALCASE # for MKS sh
-if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
+if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then :
   emulate sh
   NULLCMD=:
   # Pre-4.2 versions of Zsh do word splitting on ${1+"$@"}, which
@@ -20,23 +22,15 @@
   alias -g '${1+"$@"}'='"$@"'
   setopt NO_GLOB_SUBST
 else
-  case `(set -o) 2>/dev/null` in
-  *posix*) set -o posix ;;
+  case `(set -o) 2>/dev/null` in #(
+  *posix*) :
+    set -o posix ;; #(
+  *) :
+     ;;
 esac
-
 fi
 
 
-
-
-# PATH needs CR
-# Avoid depending upon Character Ranges.
-as_cr_letters='abcdefghijklmnopqrstuvwxyz'
-as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
-as_cr_Letters=$as_cr_letters$as_cr_LETTERS
-as_cr_digits='0123456789'
-as_cr_alnum=$as_cr_Letters$as_cr_digits
-
 as_nl='
 '
 export as_nl
@@ -44,7 +38,13 @@
 as_echo='\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\'
 as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo
 as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo$as_echo
-if (test "X`printf %s $as_echo`" = "X$as_echo") 2>/dev/null; then
+# Prefer a ksh shell builtin over an external printf program on Solaris,
+# but without wasting forks for bash or zsh.
+if test -z "$BASH_VERSION$ZSH_VERSION" \
+    && (test "X`print -r -- $as_echo`" = "X$as_echo") 2>/dev/null; then
+  as_echo='print -r --'
+  as_echo_n='print -rn --'
+elif (test "X`printf %s $as_echo`" = "X$as_echo") 2>/dev/null; then
   as_echo='printf %s\n'
   as_echo_n='printf %s'
 else
@@ -55,7 +55,7 @@
     as_echo_body='eval expr "X$1" : "X\\(.*\\)"'
     as_echo_n_body='eval
       arg=$1;
-      case $arg in
+      case $arg in #(
       *"$as_nl"*)
 	expr "X$arg" : "X\\(.*\\)$as_nl";
 	arg=`expr "X$arg" : ".*$as_nl\\(.*\\)"`;;
@@ -78,13 +78,6 @@
   }
 fi
 
-# Support unset when possible.
-if ( (MAIL=60; unset MAIL) || exit) >/dev/null 2>&1; then
-  as_unset=unset
-else
-  as_unset=false
-fi
-
 
 # IFS
 # We need space, tab and new line, in precisely that order.  Quoting is
@@ -94,15 +87,16 @@
 IFS=" ""	$as_nl"
 
 # Find who we are.  Look in the path if we contain no directory separator.
-case $0 in
+as_myself=
+case $0 in #((
   *[\\/]* ) as_myself=$0 ;;
   *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
 for as_dir in $PATH
 do
   IFS=$as_save_IFS
   test -z "$as_dir" && as_dir=.
-  test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
-done
+    test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
+  done
 IFS=$as_save_IFS
 
      ;;
@@ -114,12 +108,16 @@
 fi
 if test ! -f "$as_myself"; then
   $as_echo "$as_myself: error: cannot find myself; rerun with an absolute file name" >&2
-  { (exit 1); exit 1; }
+  exit 1
 fi
 
-# Work around bugs in pre-3.0 UWIN ksh.
-for as_var in ENV MAIL MAILPATH
-do ($as_unset $as_var) >/dev/null 2>&1 && $as_unset $as_var
+# Unset variables that we do not need and which cause bugs (e.g. in
+# pre-3.0 UWIN ksh).  But do not cause bugs in bash 2.01; the "|| exit 1"
+# suppresses any "Segmentation fault" message there.  '((' could
+# trigger a bug in pdksh 5.2.14.
+for as_var in BASH_ENV ENV MAIL MAILPATH
+do eval test x\${$as_var+set} = xset \
+  && ( (unset $as_var) || exit 1) >/dev/null 2>&1 && unset $as_var || :
 done
 PS1='$ '
 PS2='> '
@@ -131,330 +129,344 @@
 LANGUAGE=C
 export LANGUAGE
 
-# Required to use basename.
-if expr a : '\(a\)' >/dev/null 2>&1 &&
-   test "X`expr 00001 : '.*\(...\)'`" = X001; then
-  as_expr=expr
-else
-  as_expr=false
-fi
-
-if (basename -- /) >/dev/null 2>&1 && test "X`basename -- / 2>&1`" = "X/"; then
-  as_basename=basename
-else
-  as_basename=false
-fi
-
-
-# Name of the executable.
-as_me=`$as_basename -- "$0" ||
-$as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
-	 X"$0" : 'X\(//\)$' \| \
-	 X"$0" : 'X\(/\)' \| . 2>/dev/null ||
-$as_echo X/"$0" |
-    sed '/^.*\/\([^/][^/]*\)\/*$/{
-	    s//\1/
-	    q
-	  }
-	  /^X\/\(\/\/\)$/{
-	    s//\1/
-	    q
-	  }
-	  /^X\/\(\/\).*/{
-	    s//\1/
-	    q
-	  }
-	  s/.*/./; q'`
-
 # CDPATH.
-$as_unset CDPATH
-
+(unset CDPATH) >/dev/null 2>&1 && unset CDPATH
 
+# Use a proper internal environment variable to ensure we don't fall
+  # into an infinite loop, continuously re-executing ourselves.
+  if test x"${_as_can_reexec}" != xno && test "x$CONFIG_SHELL" != x; then
+    _as_can_reexec=no; export _as_can_reexec;
+    # We cannot yet assume a decent shell, so we have to provide a
+# neutralization value for shells without unset; and this also
+# works around shells that cannot unset nonexistent variables.
+# Preserve -v and -x to the replacement shell.
+BASH_ENV=/dev/null
+ENV=/dev/null
+(unset BASH_ENV) >/dev/null 2>&1 && unset BASH_ENV ENV
+case $- in # ((((
+  *v*x* | *x*v* ) as_opts=-vx ;;
+  *v* ) as_opts=-v ;;
+  *x* ) as_opts=-x ;;
+  * ) as_opts= ;;
+esac
+exec $CONFIG_SHELL $as_opts "$as_myself" ${1+"$@"}
+# Admittedly, this is quite paranoid, since all the known shells bail
+# out after a failed `exec'.
+$as_echo "$0: could not re-execute with $CONFIG_SHELL" >&2
+as_fn_exit 255
+  fi
+  # We don't want this to propagate to other subprocesses.
+          { _as_can_reexec=; unset _as_can_reexec;}
 if test "x$CONFIG_SHELL" = x; then
-  if (eval ":") 2>/dev/null; then
-  as_have_required=yes
+  as_bourne_compatible="if test -n \"\${ZSH_VERSION+set}\" && (emulate sh) >/dev/null 2>&1; then :
+  emulate sh
+  NULLCMD=:
+  # Pre-4.2 versions of Zsh do word splitting on \${1+\"\$@\"}, which
+  # is contrary to our usage.  Disable this feature.
+  alias -g '\${1+\"\$@\"}'='\"\$@\"'
+  setopt NO_GLOB_SUBST
 else
-  as_have_required=no
+  case \`(set -o) 2>/dev/null\` in #(
+  *posix*) :
+    set -o posix ;; #(
+  *) :
+     ;;
+esac
 fi
-
-  if test $as_have_required = yes &&	 (eval ":
-(as_func_return () {
-  (exit \$1)
-}
-as_func_success () {
-  as_func_return 0
-}
-as_func_failure () {
-  as_func_return 1
-}
-as_func_ret_success () {
-  return 0
-}
-as_func_ret_failure () {
-  return 1
-}
+"
+  as_required="as_fn_return () { (exit \$1); }
+as_fn_success () { as_fn_return 0; }
+as_fn_failure () { as_fn_return 1; }
+as_fn_ret_success () { return 0; }
+as_fn_ret_failure () { return 1; }
 
 exitcode=0
-if as_func_success; then
-  :
-else
-  exitcode=1
-  echo as_func_success failed.
-fi
-
-if as_func_failure; then
-  exitcode=1
-  echo as_func_failure succeeded.
-fi
-
-if as_func_ret_success; then
-  :
-else
-  exitcode=1
-  echo as_func_ret_success failed.
-fi
-
-if as_func_ret_failure; then
-  exitcode=1
-  echo as_func_ret_failure succeeded.
-fi
-
-if ( set x; as_func_ret_success y && test x = \"\$1\" ); then
-  :
+as_fn_success || { exitcode=1; echo as_fn_success failed.; }
+as_fn_failure && { exitcode=1; echo as_fn_failure succeeded.; }
+as_fn_ret_success || { exitcode=1; echo as_fn_ret_success failed.; }
+as_fn_ret_failure && { exitcode=1; echo as_fn_ret_failure succeeded.; }
+if ( set x; as_fn_ret_success y && test x = \"\$1\" ); then :
+
+else
+  exitcode=1; echo positional parameters were not saved.
+fi
+test x\$exitcode = x0 || exit 1
+test -x / || exit 1"
+  as_suggested="  as_lineno_1=";as_suggested=$as_suggested$LINENO;as_suggested=$as_suggested" as_lineno_1a=\$LINENO
+  as_lineno_2=";as_suggested=$as_suggested$LINENO;as_suggested=$as_suggested" as_lineno_2a=\$LINENO
+  eval 'test \"x\$as_lineno_1'\$as_run'\" != \"x\$as_lineno_2'\$as_run'\" &&
+  test \"x\`expr \$as_lineno_1'\$as_run' + 1\`\" = \"x\$as_lineno_2'\$as_run'\"' || exit 1
+test \$(( 1 + 1 )) = 2 || exit 1"
+  if (eval "$as_required") 2>/dev/null; then :
+  as_have_required=yes
 else
-  exitcode=1
-  echo positional parameters were not saved.
+  as_have_required=no
 fi
+  if test x$as_have_required = xyes && (eval "$as_suggested") 2>/dev/null; then :
 
-test \$exitcode = 0) || { (exit 1); exit 1; }
-
-(
-  as_lineno_1=\$LINENO
-  as_lineno_2=\$LINENO
-  test \"x\$as_lineno_1\" != \"x\$as_lineno_2\" &&
-  test \"x\`expr \$as_lineno_1 + 1\`\" = \"x\$as_lineno_2\") || { (exit 1); exit 1; }
-") 2> /dev/null; then
-  :
 else
-  as_candidate_shells=
-    as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+  as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+as_found=false
 for as_dir in /bin$PATH_SEPARATOR/usr/bin$PATH_SEPARATOR$PATH
 do
   IFS=$as_save_IFS
   test -z "$as_dir" && as_dir=.
-  case $as_dir in
+  as_found=:
+  case $as_dir in #(
 	 /*)
 	   for as_base in sh bash ksh sh5; do
-	     as_candidate_shells="$as_candidate_shells $as_dir/$as_base"
+	     # Try only shells that exist, to save several forks.
+	     as_shell=$as_dir/$as_base
+	     if { test -f "$as_shell" || test -f "$as_shell.exe"; } &&
+		    { $as_echo "$as_bourne_compatible""$as_required" | as_run=a "$as_shell"; } 2>/dev/null; then :
+  CONFIG_SHELL=$as_shell as_have_required=yes
+		   if { $as_echo "$as_bourne_compatible""$as_suggested" | as_run=a "$as_shell"; } 2>/dev/null; then :
+  break 2
+fi
+fi
 	   done;;
        esac
+  as_found=false
 done
+$as_found || { if { test -f "$SHELL" || test -f "$SHELL.exe"; } &&
+	      { $as_echo "$as_bourne_compatible""$as_required" | as_run=a "$SHELL"; } 2>/dev/null; then :
+  CONFIG_SHELL=$SHELL as_have_required=yes
+fi; }
 IFS=$as_save_IFS
 
 
-      for as_shell in $as_candidate_shells $SHELL; do
-	 # Try only shells that exist, to save several forks.
-	 if { test -f "$as_shell" || test -f "$as_shell.exe"; } &&
-		{ ("$as_shell") 2> /dev/null <<\_ASEOF
-if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
-  emulate sh
-  NULLCMD=:
-  # Pre-4.2 versions of Zsh do word splitting on ${1+"$@"}, which
-  # is contrary to our usage.  Disable this feature.
-  alias -g '${1+"$@"}'='"$@"'
-  setopt NO_GLOB_SUBST
-else
-  case `(set -o) 2>/dev/null` in
-  *posix*) set -o posix ;;
-esac
-
-fi
-
-
-:
-_ASEOF
-}; then
-  CONFIG_SHELL=$as_shell
-	       as_have_required=yes
-	       if { "$as_shell" 2> /dev/null <<\_ASEOF
-if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
-  emulate sh
-  NULLCMD=:
-  # Pre-4.2 versions of Zsh do word splitting on ${1+"$@"}, which
-  # is contrary to our usage.  Disable this feature.
-  alias -g '${1+"$@"}'='"$@"'
-  setopt NO_GLOB_SUBST
-else
-  case `(set -o) 2>/dev/null` in
-  *posix*) set -o posix ;;
-esac
-
-fi
-
-
-:
-(as_func_return () {
-  (exit $1)
-}
-as_func_success () {
-  as_func_return 0
-}
-as_func_failure () {
-  as_func_return 1
-}
-as_func_ret_success () {
-  return 0
-}
-as_func_ret_failure () {
-  return 1
-}
-
-exitcode=0
-if as_func_success; then
-  :
-else
-  exitcode=1
-  echo as_func_success failed.
-fi
-
-if as_func_failure; then
-  exitcode=1
-  echo as_func_failure succeeded.
-fi
-
-if as_func_ret_success; then
-  :
-else
-  exitcode=1
-  echo as_func_ret_success failed.
-fi
-
-if as_func_ret_failure; then
-  exitcode=1
-  echo as_func_ret_failure succeeded.
-fi
-
-if ( set x; as_func_ret_success y && test x = "$1" ); then
-  :
-else
-  exitcode=1
-  echo positional parameters were not saved.
+      if test "x$CONFIG_SHELL" != x; then :
+  export CONFIG_SHELL
+             # We cannot yet assume a decent shell, so we have to provide a
+# neutralization value for shells without unset; and this also
+# works around shells that cannot unset nonexistent variables.
+# Preserve -v and -x to the replacement shell.
+BASH_ENV=/dev/null
+ENV=/dev/null
+(unset BASH_ENV) >/dev/null 2>&1 && unset BASH_ENV ENV
+case $- in # ((((
+  *v*x* | *x*v* ) as_opts=-vx ;;
+  *v* ) as_opts=-v ;;
+  *x* ) as_opts=-x ;;
+  * ) as_opts= ;;
+esac
+exec $CONFIG_SHELL $as_opts "$as_myself" ${1+"$@"}
+# Admittedly, this is quite paranoid, since all the known shells bail
+# out after a failed `exec'.
+$as_echo "$0: could not re-execute with $CONFIG_SHELL" >&2
+exit 255
+fi
+
+    if test x$as_have_required = xno; then :
+  $as_echo "$0: This script requires a shell more modern than all"
+  $as_echo "$0: the shells that I found on your system."
+  if test x${ZSH_VERSION+set} = xset ; then
+    $as_echo "$0: In particular, zsh $ZSH_VERSION has bugs and should"
+    $as_echo "$0: be upgraded to zsh 4.3.4 or later."
+  else
+    $as_echo "$0: Please tell bug-autoconf@gnu.org about your system,
+$0: including any error possibly output before this
+$0: message. Then install a modern shell, or manually run
+$0: the script under such a shell if you do have one."
+  fi
+  exit 1
 fi
-
-test $exitcode = 0) || { (exit 1); exit 1; }
-
-(
-  as_lineno_1=$LINENO
-  as_lineno_2=$LINENO
-  test "x$as_lineno_1" != "x$as_lineno_2" &&
-  test "x`expr $as_lineno_1 + 1`" = "x$as_lineno_2") || { (exit 1); exit 1; }
-
-_ASEOF
-}; then
-  break
 fi
-
 fi
+SHELL=${CONFIG_SHELL-/bin/sh}
+export SHELL
+# Unset more variables known to interfere with behavior of common tools.
+CLICOLOR_FORCE= GREP_OPTIONS=
+unset CLICOLOR_FORCE GREP_OPTIONS
 
-      done
+## --------------------- ##
+## M4sh Shell Functions. ##
+## --------------------- ##
+# as_fn_unset VAR
+# ---------------
+# Portably unset VAR.
+as_fn_unset ()
+{
+  { eval $1=; unset $1;}
+}
+as_unset=as_fn_unset
 
-      if test "x$CONFIG_SHELL" != x; then
-  for as_var in BASH_ENV ENV
-	do ($as_unset $as_var) >/dev/null 2>&1 && $as_unset $as_var
-	done
-	export CONFIG_SHELL
-	exec "$CONFIG_SHELL" "$as_myself" ${1+"$@"}
-fi
+# as_fn_set_status STATUS
+# -----------------------
+# Set $? to STATUS, without forking.
+as_fn_set_status ()
+{
+  return $1
+} # as_fn_set_status
 
+# as_fn_exit STATUS
+# -----------------
+# Exit the shell with STATUS, even in a "trap 0" or "set -e" context.
+as_fn_exit ()
+{
+  set +e
+  as_fn_set_status $1
+  exit $1
+} # as_fn_exit
+
+# as_fn_mkdir_p
+# -------------
+# Create "$as_dir" as a directory, including parents if necessary.
+as_fn_mkdir_p ()
+{
 
-    if test $as_have_required = no; then
-  echo This script requires a shell more modern than all the
-      echo shells that I found on your system.  Please install a
-      echo modern shell, or manually run the script under such a
-      echo shell if you do have one.
-      { (exit 1); exit 1; }
-fi
+  case $as_dir in #(
+  -*) as_dir=./$as_dir;;
+  esac
+  test -d "$as_dir" || eval $as_mkdir_p || {
+    as_dirs=
+    while :; do
+      case $as_dir in #(
+      *\'*) as_qdir=`$as_echo "$as_dir" | sed "s/'/'\\\\\\\\''/g"`;; #'(
+      *) as_qdir=$as_dir;;
+      esac
+      as_dirs="'$as_qdir' $as_dirs"
+      as_dir=`$as_dirname -- "$as_dir" ||
+$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+	 X"$as_dir" : 'X\(//\)[^/]' \| \
+	 X"$as_dir" : 'X\(//\)$' \| \
+	 X"$as_dir" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X"$as_dir" |
+    sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
+	    s//\1/
+	    q
+	  }
+	  /^X\(\/\/\)[^/].*/{
+	    s//\1/
+	    q
+	  }
+	  /^X\(\/\/\)$/{
+	    s//\1/
+	    q
+	  }
+	  /^X\(\/\).*/{
+	    s//\1/
+	    q
+	  }
+	  s/.*/./; q'`
+      test -d "$as_dir" && break
+    done
+    test -z "$as_dirs" || eval "mkdir $as_dirs"
+  } || test -d "$as_dir" || as_fn_error $? "cannot create directory $as_dir"
 
 
-fi
+} # as_fn_mkdir_p
 
-fi
+# as_fn_executable_p FILE
+# -----------------------
+# Test if FILE is an executable regular file.
+as_fn_executable_p ()
+{
+  test -f "$1" && test -x "$1"
+} # as_fn_executable_p
+# as_fn_append VAR VALUE
+# ----------------------
+# Append the text in VALUE to the end of the definition contained in VAR. Take
+# advantage of any shell optimizations that allow amortized linear growth over
+# repeated appends, instead of the typical quadratic growth present in naive
+# implementations.
+if (eval "as_var=1; as_var+=2; test x\$as_var = x12") 2>/dev/null; then :
+  eval 'as_fn_append ()
+  {
+    eval $1+=\$2
+  }'
+else
+  as_fn_append ()
+  {
+    eval $1=\$$1\$2
+  }
+fi # as_fn_append
 
+# as_fn_arith ARG...
+# ------------------
+# Perform arithmetic evaluation on the ARGs, and store the result in the
+# global $as_val. Take advantage of shells that can avoid forks. The arguments
+# must be portable across $(()) and expr.
+if (eval "test \$(( 1 + 1 )) = 2") 2>/dev/null; then :
+  eval 'as_fn_arith ()
+  {
+    as_val=$(( $* ))
+  }'
+else
+  as_fn_arith ()
+  {
+    as_val=`expr "$@" || test $? -eq 1`
+  }
+fi # as_fn_arith
 
 
-(eval "as_func_return () {
-  (exit \$1)
-}
-as_func_success () {
-  as_func_return 0
-}
-as_func_failure () {
-  as_func_return 1
-}
-as_func_ret_success () {
-  return 0
-}
-as_func_ret_failure () {
-  return 1
-}
+# as_fn_error STATUS ERROR [LINENO LOG_FD]
+# ----------------------------------------
+# Output "`basename $0`: error: ERROR" to stderr. If LINENO and LOG_FD are
+# provided, also output the error to LOG_FD, referencing LINENO. Then exit the
+# script with STATUS, using 1 if that was 0.
+as_fn_error ()
+{
+  as_status=$1; test $as_status -eq 0 && as_status=1
+  if test "$4"; then
+    as_lineno=${as_lineno-"$3"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+    $as_echo "$as_me:${as_lineno-$LINENO}: error: $2" >&$4
+  fi
+  $as_echo "$as_me: error: $2" >&2
+  as_fn_exit $as_status
+} # as_fn_error
 
-exitcode=0
-if as_func_success; then
-  :
+if expr a : '\(a\)' >/dev/null 2>&1 &&
+   test "X`expr 00001 : '.*\(...\)'`" = X001; then
+  as_expr=expr
 else
-  exitcode=1
-  echo as_func_success failed.
-fi
-
-if as_func_failure; then
-  exitcode=1
-  echo as_func_failure succeeded.
+  as_expr=false
 fi
 
-if as_func_ret_success; then
-  :
+if (basename -- /) >/dev/null 2>&1 && test "X`basename -- / 2>&1`" = "X/"; then
+  as_basename=basename
 else
-  exitcode=1
-  echo as_func_ret_success failed.
-fi
-
-if as_func_ret_failure; then
-  exitcode=1
-  echo as_func_ret_failure succeeded.
+  as_basename=false
 fi
 
-if ( set x; as_func_ret_success y && test x = \"\$1\" ); then
-  :
+if (as_dir=`dirname -- /` && test "X$as_dir" = X/) >/dev/null 2>&1; then
+  as_dirname=dirname
 else
-  exitcode=1
-  echo positional parameters were not saved.
+  as_dirname=false
 fi
 
-test \$exitcode = 0") || {
-  echo No shell found that supports shell functions.
-  echo Please tell bug-autoconf@gnu.org about your system,
-  echo including any error possibly output before this message.
-  echo This can help us improve future autoconf versions.
-  echo Configuration will now proceed without shell functions.
-}
+as_me=`$as_basename -- "$0" ||
+$as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
+	 X"$0" : 'X\(//\)$' \| \
+	 X"$0" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X/"$0" |
+    sed '/^.*\/\([^/][^/]*\)\/*$/{
+	    s//\1/
+	    q
+	  }
+	  /^X\/\(\/\/\)$/{
+	    s//\1/
+	    q
+	  }
+	  /^X\/\(\/\).*/{
+	    s//\1/
+	    q
+	  }
+	  s/.*/./; q'`
 
+# Avoid depending upon Character Ranges.
+as_cr_letters='abcdefghijklmnopqrstuvwxyz'
+as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
+as_cr_Letters=$as_cr_letters$as_cr_LETTERS
+as_cr_digits='0123456789'
+as_cr_alnum=$as_cr_Letters$as_cr_digits
 
 
-  as_lineno_1=$LINENO
-  as_lineno_2=$LINENO
-  test "x$as_lineno_1" != "x$as_lineno_2" &&
-  test "x`expr $as_lineno_1 + 1`" = "x$as_lineno_2" || {
-
-  # Create $as_me.lineno as a copy of $as_myself, but with $LINENO
-  # uniformly replaced by the line number.  The first 'sed' inserts a
-  # line-number line after each line using $LINENO; the second 'sed'
-  # does the real work.  The second script uses 'N' to pair each
-  # line-number line with the line containing $LINENO, and appends
-  # trailing '-' during substitution so that $LINENO is not a special
-  # case at line end.
-  # (Raja R Harinath suggested sed '=', and Paul Eggert wrote the
-  # scripts with optimization help from Paolo Bonzini.  Blame Lee
-  # E. McMahon (1931-1989) for sed's syntax.  :-)
+  as_lineno_1=$LINENO as_lineno_1a=$LINENO
+  as_lineno_2=$LINENO as_lineno_2a=$LINENO
+  eval 'test "x$as_lineno_1'$as_run'" != "x$as_lineno_2'$as_run'" &&
+  test "x`expr $as_lineno_1'$as_run' + 1`" = "x$as_lineno_2'$as_run'"' || {
+  # Blame Lee E. McMahon (1931-1989) for sed's syntax.  :-)
   sed -n '
     p
     /[$]LINENO/=
@@ -471,9 +483,12 @@
       s/-\n.*//
     ' >$as_me.lineno &&
   chmod +x "$as_me.lineno" ||
-    { $as_echo "$as_me: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&2
-   { (exit 1); exit 1; }; }
+    { $as_echo "$as_me: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&2; as_fn_exit 1; }
 
+  # If we had to re-execute with $CONFIG_SHELL, we're ensured to have
+  # already done that, so ensure we don't try to do so again and fall
+  # in an infinite loop.  This has already happened in practice.
+  _as_can_reexec=no; export _as_can_reexec
   # Don't try to exec as it changes $[0], causing all sort of problems
   # (the dirname of $[0] is not the place where we might find the
   # original and so on.  Autoconf is especially sensitive to this).
@@ -482,29 +497,18 @@
   exit
 }
 
-
-if (as_dir=`dirname -- /` && test "X$as_dir" = X/) >/dev/null 2>&1; then
-  as_dirname=dirname
-else
-  as_dirname=false
-fi
-
 ECHO_C= ECHO_N= ECHO_T=
-case `echo -n x` in
+case `echo -n x` in #(((((
 -n*)
-  case `echo 'x\c'` in
+  case `echo 'xy\c'` in
   *c*) ECHO_T='	';;	# ECHO_T is single tab character.
-  *)   ECHO_C='\c';;
+  xy)  ECHO_C='\c';;
+  *)   echo `echo ksh88 bug on AIX 6.1` > /dev/null
+       ECHO_T='	';;
   esac;;
 *)
   ECHO_N='-n';;
 esac
-if expr a : '\(a\)' >/dev/null 2>&1 &&
-   test "X`expr 00001 : '.*\(...\)'`" = X001; then
-  as_expr=expr
-else
-  as_expr=false
-fi
 
 rm -f conf$$ conf$$.exe conf$$.file
 if test -d conf$$.dir; then
@@ -519,49 +523,29 @@
     # ... but there are two gotchas:
     # 1) On MSYS, both `ln -s file dir' and `ln file dir' fail.
     # 2) DJGPP < 2.04 has no symlinks; `ln -s' creates a wrapper executable.
-    # In both cases, we have to default to `cp -p'.
+    # In both cases, we have to default to `cp -pR'.
     ln -s conf$$.file conf$$.dir 2>/dev/null && test ! -f conf$$.exe ||
-      as_ln_s='cp -p'
+      as_ln_s='cp -pR'
   elif ln conf$$.file conf$$ 2>/dev/null; then
     as_ln_s=ln
   else
-    as_ln_s='cp -p'
+    as_ln_s='cp -pR'
   fi
 else
-  as_ln_s='cp -p'
+  as_ln_s='cp -pR'
 fi
 rm -f conf$$ conf$$.exe conf$$.dir/conf$$.file conf$$.file
 rmdir conf$$.dir 2>/dev/null
 
 if mkdir -p . 2>/dev/null; then
-  as_mkdir_p=:
+  as_mkdir_p='mkdir -p "$as_dir"'
 else
   test -d ./-p && rmdir ./-p
   as_mkdir_p=false
 fi
 
-if test -x / >/dev/null 2>&1; then
-  as_test_x='test -x'
-else
-  if ls -dL / >/dev/null 2>&1; then
-    as_ls_L_option=L
-  else
-    as_ls_L_option=
-  fi
-  as_test_x='
-    eval sh -c '\''
-      if test -d "$1"; then
-	test -d "$1/.";
-      else
-	case $1 in
-	-*)set "./$1";;
-	esac;
-	case `ls -ld'$as_ls_L_option' "$1" 2>/dev/null` in
-	???[sx]*):;;*)false;;esac;fi
-    '\'' sh
-  '
-fi
-as_executable_p=$as_test_x
+as_test_x='test -x'
+as_executable_p=as_fn_executable_p
 
 # Sed expression to map a string onto a valid CPP name.
 as_tr_cpp="eval sed 'y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g'"
@@ -570,11 +554,11 @@
 as_tr_sh="eval sed 'y%*+%pp%;s%[^_$as_cr_alnum]%_%g'"
 
 
-
-exec 7<&0 </dev/null 6>&1
+test -n "$DJDIR" || exec 7<&0 </dev/null
+exec 6>&1
 
 # Name of the host.
-# hostname on some systems (SVR3.2, Linux) returns a bogus exit status,
+# hostname on some systems (SVR3.2, old GNU/Linux) returns a bogus exit status,
 # so uname gets run too.
 ac_hostname=`(hostname || uname -n) 2>/dev/null | sed 1q`
 
@@ -589,7 +573,6 @@
 subdirs=
 MFLAGS=
 MAKEFLAGS=
-SHELL=${CONFIG_SHELL-/bin/sh}
 
 # Identity of this package.
 PACKAGE_NAME=
@@ -597,6 +580,7 @@
 PACKAGE_VERSION=
 PACKAGE_STRING=
 PACKAGE_BUGREPORT=
+PACKAGE_URL=
 
 ac_unique_file=""DESCRIPTION""
 # Factoring default headers for most tests.
@@ -677,6 +661,7 @@
 program_transform_name
 prefix
 exec_prefix
+PACKAGE_URL
 PACKAGE_BUGREPORT
 PACKAGE_STRING
 PACKAGE_VERSION
@@ -687,6 +672,7 @@
 ac_subst_files=''
 ac_user_opts='
 enable_option_checking
+enable_threading
 '
       ac_precious_vars='build_alias
 host_alias
@@ -759,8 +745,9 @@
   fi
 
   case $ac_option in
-  *=*)	ac_optarg=`expr "X$ac_option" : '[^=]*=\(.*\)'` ;;
-  *)	ac_optarg=yes ;;
+  *=?*) ac_optarg=`expr "X$ac_option" : '[^=]*=\(.*\)'` ;;
+  *=)   ac_optarg= ;;
+  *)    ac_optarg=yes ;;
   esac
 
   # Accept the important Cygnus configure options, so we can diagnose typos.
@@ -805,8 +792,7 @@
     ac_useropt=`expr "x$ac_option" : 'x-*disable-\(.*\)'`
     # Reject names that are not valid shell variable names.
     expr "x$ac_useropt" : ".*[^-+._$as_cr_alnum]" >/dev/null &&
-      { $as_echo "$as_me: error: invalid feature name: $ac_useropt" >&2
-   { (exit 1); exit 1; }; }
+      as_fn_error $? "invalid feature name: $ac_useropt"
     ac_useropt_orig=$ac_useropt
     ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
     case $ac_user_opts in
@@ -832,8 +818,7 @@
     ac_useropt=`expr "x$ac_option" : 'x-*enable-\([^=]*\)'`
     # Reject names that are not valid shell variable names.
     expr "x$ac_useropt" : ".*[^-+._$as_cr_alnum]" >/dev/null &&
-      { $as_echo "$as_me: error: invalid feature name: $ac_useropt" >&2
-   { (exit 1); exit 1; }; }
+      as_fn_error $? "invalid feature name: $ac_useropt"
     ac_useropt_orig=$ac_useropt
     ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
     case $ac_user_opts in
@@ -1037,8 +1022,7 @@
     ac_useropt=`expr "x$ac_option" : 'x-*with-\([^=]*\)'`
     # Reject names that are not valid shell variable names.
     expr "x$ac_useropt" : ".*[^-+._$as_cr_alnum]" >/dev/null &&
-      { $as_echo "$as_me: error: invalid package name: $ac_useropt" >&2
-   { (exit 1); exit 1; }; }
+      as_fn_error $? "invalid package name: $ac_useropt"
     ac_useropt_orig=$ac_useropt
     ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
     case $ac_user_opts in
@@ -1054,8 +1038,7 @@
     ac_useropt=`expr "x$ac_option" : 'x-*without-\(.*\)'`
     # Reject names that are not valid shell variable names.
     expr "x$ac_useropt" : ".*[^-+._$as_cr_alnum]" >/dev/null &&
-      { $as_echo "$as_me: error: invalid package name: $ac_useropt" >&2
-   { (exit 1); exit 1; }; }
+      as_fn_error $? "invalid package name: $ac_useropt"
     ac_useropt_orig=$ac_useropt
     ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
     case $ac_user_opts in
@@ -1085,17 +1068,17 @@
   | --x-librar=* | --x-libra=* | --x-libr=* | --x-lib=* | --x-li=* | --x-l=*)
     x_libraries=$ac_optarg ;;
 
-  -*) { $as_echo "$as_me: error: unrecognized option: $ac_option
-Try \`$0 --help' for more information." >&2
-   { (exit 1); exit 1; }; }
+  -*) as_fn_error $? "unrecognized option: \`$ac_option'
+Try \`$0 --help' for more information"
     ;;
 
   *=*)
     ac_envvar=`expr "x$ac_option" : 'x\([^=]*\)='`
     # Reject names that are not valid shell variable names.
-    expr "x$ac_envvar" : ".*[^_$as_cr_alnum]" >/dev/null &&
-      { $as_echo "$as_me: error: invalid variable name: $ac_envvar" >&2
-   { (exit 1); exit 1; }; }
+    case $ac_envvar in #(
+      '' | [0-9]* | *[!_$as_cr_alnum]* )
+      as_fn_error $? "invalid variable name: \`$ac_envvar'" ;;
+    esac
     eval $ac_envvar=\$ac_optarg
     export $ac_envvar ;;
 
@@ -1104,7 +1087,7 @@
     $as_echo "$as_me: WARNING: you should use --build, --host, --target" >&2
     expr "x$ac_option" : ".*[^-._$as_cr_alnum]" >/dev/null &&
       $as_echo "$as_me: WARNING: invalid host type: $ac_option" >&2
-    : ${build_alias=$ac_option} ${host_alias=$ac_option} ${target_alias=$ac_option}
+    : "${build_alias=$ac_option} ${host_alias=$ac_option} ${target_alias=$ac_option}"
     ;;
 
   esac
@@ -1112,15 +1095,13 @@
 
 if test -n "$ac_prev"; then
   ac_option=--`echo $ac_prev | sed 's/_/-/g'`
-  { $as_echo "$as_me: error: missing argument to $ac_option" >&2
-   { (exit 1); exit 1; }; }
+  as_fn_error $? "missing argument to $ac_option"
 fi
 
 if test -n "$ac_unrecognized_opts"; then
   case $enable_option_checking in
     no) ;;
-    fatal) { $as_echo "$as_me: error: unrecognized options: $ac_unrecognized_opts" >&2
-   { (exit 1); exit 1; }; } ;;
+    fatal) as_fn_error $? "unrecognized options: $ac_unrecognized_opts" ;;
     *)     $as_echo "$as_me: WARNING: unrecognized options: $ac_unrecognized_opts" >&2 ;;
   esac
 fi
@@ -1143,8 +1124,7 @@
     [\\/$]* | ?:[\\/]* )  continue;;
     NONE | '' ) case $ac_var in *prefix ) continue;; esac;;
   esac
-  { $as_echo "$as_me: error: expected an absolute directory name for --$ac_var: $ac_val" >&2
-   { (exit 1); exit 1; }; }
+  as_fn_error $? "expected an absolute directory name for --$ac_var: $ac_val"
 done
 
 # There might be people who depend on the old broken behavior: `$host'
@@ -1158,8 +1138,6 @@
 if test "x$host_alias" != x; then
   if test "x$build_alias" = x; then
     cross_compiling=maybe
-    $as_echo "$as_me: WARNING: If you wanted to set the --build type, don't use --host.
-    If a cross compiler is detected then cross compile mode will be used." >&2
   elif test "x$build_alias" != "x$host_alias"; then
     cross_compiling=yes
   fi
@@ -1174,11 +1152,9 @@
 ac_pwd=`pwd` && test -n "$ac_pwd" &&
 ac_ls_di=`ls -di .` &&
 ac_pwd_ls_di=`cd "$ac_pwd" && ls -di .` ||
-  { $as_echo "$as_me: error: working directory cannot be determined" >&2
-   { (exit 1); exit 1; }; }
+  as_fn_error $? "working directory cannot be determined"
 test "X$ac_ls_di" = "X$ac_pwd_ls_di" ||
-  { $as_echo "$as_me: error: pwd does not report name of working directory" >&2
-   { (exit 1); exit 1; }; }
+  as_fn_error $? "pwd does not report name of working directory"
 
 
 # Find the source files, if location was not specified.
@@ -1217,13 +1193,11 @@
 fi
 if test ! -r "$srcdir/$ac_unique_file"; then
   test "$ac_srcdir_defaulted" = yes && srcdir="$ac_confdir or .."
-  { $as_echo "$as_me: error: cannot find sources ($ac_unique_file) in $srcdir" >&2
-   { (exit 1); exit 1; }; }
+  as_fn_error $? "cannot find sources ($ac_unique_file) in $srcdir"
 fi
 ac_msg="sources are in $srcdir, but \`cd $srcdir' does not work"
 ac_abs_confdir=`(
-	cd "$srcdir" && test -r "./$ac_unique_file" || { $as_echo "$as_me: error: $ac_msg" >&2
-   { (exit 1); exit 1; }; }
+	cd "$srcdir" && test -r "./$ac_unique_file" || as_fn_error $? "$ac_msg"
 	pwd)`
 # When building in place, set srcdir=.
 if test "$ac_abs_confdir" = "$ac_pwd"; then
@@ -1263,7 +1237,7 @@
       --help=short        display options specific to this package
       --help=recursive    display the short help of all the included packages
   -V, --version           display version information and exit
-  -q, --quiet, --silent   do not print \`checking...' messages
+  -q, --quiet, --silent   do not print \`checking ...' messages
       --cache-file=FILE   cache test results in FILE [disabled]
   -C, --config-cache      alias for \`--cache-file=config.cache'
   -n, --no-create         do not create output files
@@ -1312,19 +1286,26 @@
 
   cat <<\_ACEOF
 
+Optional Features:
+  --disable-option-checking  ignore unrecognized --enable/--with options
+  --disable-FEATURE       do not include FEATURE (same as --enable-FEATURE=no)
+  --enable-FEATURE[=ARG]  include FEATURE [ARG=yes]
+  --disable-threading     Disable threading
+
 Some influential environment variables:
   CC          C compiler command
   CFLAGS      C compiler flags
   LDFLAGS     linker flags, e.g. -L<lib dir> if you have libraries in a
               nonstandard directory <lib dir>
   LIBS        libraries to pass to the linker, e.g. -l<library>
-  CPPFLAGS    C/C++/Objective C preprocessor flags, e.g. -I<include dir> if
+  CPPFLAGS    (Objective) C/C++ preprocessor flags, e.g. -I<include dir> if
               you have headers in a nonstandard directory <include dir>
   CPP         C preprocessor
 
 Use these variables to override the choices made by `configure' or to help
 it to find libraries and programs with nonstandard names/locations.
 
+Report bugs to the package provider.
 _ACEOF
 ac_status=$?
 fi
@@ -1384,25 +1365,309 @@
   done
 fi
 
-test -n "$ac_init_help" && exit $ac_status
-if $ac_init_version; then
-  cat <<\_ACEOF
-configure
-generated by GNU Autoconf 2.63
+test -n "$ac_init_help" && exit $ac_status
+if $ac_init_version; then
+  cat <<\_ACEOF
+configure
+generated by GNU Autoconf 2.69
+
+Copyright (C) 2012 Free Software Foundation, Inc.
+This configure script is free software; the Free Software Foundation
+gives unlimited permission to copy, distribute and modify it.
+_ACEOF
+  exit
+fi
+
+## ------------------------ ##
+## Autoconf initialization. ##
+## ------------------------ ##
+
+# ac_fn_c_try_compile LINENO
+# --------------------------
+# Try to compile conftest.$ac_ext, and return whether this succeeded.
+ac_fn_c_try_compile ()
+{
+  as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+  rm -f conftest.$ac_objext
+  if { { ac_try="$ac_compile"
+case "(($ac_try" in
+  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+  *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+  (eval "$ac_compile") 2>conftest.err
+  ac_status=$?
+  if test -s conftest.err; then
+    grep -v '^ *+' conftest.err >conftest.er1
+    cat conftest.er1 >&5
+    mv -f conftest.er1 conftest.err
+  fi
+  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+  test $ac_status = 0; } && {
+	 test -z "$ac_c_werror_flag" ||
+	 test ! -s conftest.err
+       } && test -s conftest.$ac_objext; then :
+  ac_retval=0
+else
+  $as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+	ac_retval=1
+fi
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+  as_fn_set_status $ac_retval
+
+} # ac_fn_c_try_compile
+
+# ac_fn_c_try_link LINENO
+# -----------------------
+# Try to link conftest.$ac_ext, and return whether this succeeded.
+ac_fn_c_try_link ()
+{
+  as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+  rm -f conftest.$ac_objext conftest$ac_exeext
+  if { { ac_try="$ac_link"
+case "(($ac_try" in
+  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+  *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+  (eval "$ac_link") 2>conftest.err
+  ac_status=$?
+  if test -s conftest.err; then
+    grep -v '^ *+' conftest.err >conftest.er1
+    cat conftest.er1 >&5
+    mv -f conftest.er1 conftest.err
+  fi
+  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+  test $ac_status = 0; } && {
+	 test -z "$ac_c_werror_flag" ||
+	 test ! -s conftest.err
+       } && test -s conftest$ac_exeext && {
+	 test "$cross_compiling" = yes ||
+	 test -x conftest$ac_exeext
+       }; then :
+  ac_retval=0
+else
+  $as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+	ac_retval=1
+fi
+  # Delete the IPA/IPO (Inter Procedural Analysis/Optimization) information
+  # created by the PGI compiler (conftest_ipa8_conftest.oo), as it would
+  # interfere with the next link command; also delete a directory that is
+  # left behind by Apple's compiler.  We do this before executing the actions.
+  rm -rf conftest.dSYM conftest_ipa8_conftest.oo
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+  as_fn_set_status $ac_retval
+
+} # ac_fn_c_try_link
+
+# ac_fn_c_try_cpp LINENO
+# ----------------------
+# Try to preprocess conftest.$ac_ext, and return whether this succeeded.
+ac_fn_c_try_cpp ()
+{
+  as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+  if { { ac_try="$ac_cpp conftest.$ac_ext"
+case "(($ac_try" in
+  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+  *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+  (eval "$ac_cpp conftest.$ac_ext") 2>conftest.err
+  ac_status=$?
+  if test -s conftest.err; then
+    grep -v '^ *+' conftest.err >conftest.er1
+    cat conftest.er1 >&5
+    mv -f conftest.er1 conftest.err
+  fi
+  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+  test $ac_status = 0; } > conftest.i && {
+	 test -z "$ac_c_preproc_warn_flag$ac_c_werror_flag" ||
+	 test ! -s conftest.err
+       }; then :
+  ac_retval=0
+else
+  $as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+    ac_retval=1
+fi
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+  as_fn_set_status $ac_retval
+
+} # ac_fn_c_try_cpp
+
+# ac_fn_c_check_header_mongrel LINENO HEADER VAR INCLUDES
+# -------------------------------------------------------
+# Tests whether HEADER exists, giving a warning if it cannot be compiled using
+# the include files in INCLUDES and setting the cache variable VAR
+# accordingly.
+ac_fn_c_check_header_mongrel ()
+{
+  as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+  if eval \${$3+:} false; then :
+  { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
+$as_echo_n "checking for $2... " >&6; }
+if eval \${$3+:} false; then :
+  $as_echo_n "(cached) " >&6
+fi
+eval ac_res=\$$3
+	       { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
+$as_echo "$ac_res" >&6; }
+else
+  # Is the header compilable?
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking $2 usability" >&5
+$as_echo_n "checking $2 usability... " >&6; }
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h.  */
+$4
+#include <$2>
+_ACEOF
+if ac_fn_c_try_compile "$LINENO"; then :
+  ac_header_compiler=yes
+else
+  ac_header_compiler=no
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_header_compiler" >&5
+$as_echo "$ac_header_compiler" >&6; }
+
+# Is the header present?
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking $2 presence" >&5
+$as_echo_n "checking $2 presence... " >&6; }
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h.  */
+#include <$2>
+_ACEOF
+if ac_fn_c_try_cpp "$LINENO"; then :
+  ac_header_preproc=yes
+else
+  ac_header_preproc=no
+fi
+rm -f conftest.err conftest.i conftest.$ac_ext
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_header_preproc" >&5
+$as_echo "$ac_header_preproc" >&6; }
+
+# So?  What about this header?
+case $ac_header_compiler:$ac_header_preproc:$ac_c_preproc_warn_flag in #((
+  yes:no: )
+    { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: accepted by the compiler, rejected by the preprocessor!" >&5
+$as_echo "$as_me: WARNING: $2: accepted by the compiler, rejected by the preprocessor!" >&2;}
+    { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: proceeding with the compiler's result" >&5
+$as_echo "$as_me: WARNING: $2: proceeding with the compiler's result" >&2;}
+    ;;
+  no:yes:* )
+    { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: present but cannot be compiled" >&5
+$as_echo "$as_me: WARNING: $2: present but cannot be compiled" >&2;}
+    { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2:     check for missing prerequisite headers?" >&5
+$as_echo "$as_me: WARNING: $2:     check for missing prerequisite headers?" >&2;}
+    { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: see the Autoconf documentation" >&5
+$as_echo "$as_me: WARNING: $2: see the Autoconf documentation" >&2;}
+    { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2:     section \"Present But Cannot Be Compiled\"" >&5
+$as_echo "$as_me: WARNING: $2:     section \"Present But Cannot Be Compiled\"" >&2;}
+    { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: proceeding with the compiler's result" >&5
+$as_echo "$as_me: WARNING: $2: proceeding with the compiler's result" >&2;}
+    ;;
+esac
+  { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
+$as_echo_n "checking for $2... " >&6; }
+if eval \${$3+:} false; then :
+  $as_echo_n "(cached) " >&6
+else
+  eval "$3=\$ac_header_compiler"
+fi
+eval ac_res=\$$3
+	       { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
+$as_echo "$ac_res" >&6; }
+fi
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+
+} # ac_fn_c_check_header_mongrel
 
-Copyright (C) 1992, 1993, 1994, 1995, 1996, 1998, 1999, 2000, 2001,
-2002, 2003, 2004, 2005, 2006, 2007, 2008 Free Software Foundation, Inc.
-This configure script is free software; the Free Software Foundation
-gives unlimited permission to copy, distribute and modify it.
+# ac_fn_c_try_run LINENO
+# ----------------------
+# Try to link conftest.$ac_ext, and return whether this succeeded. Assumes
+# that executables *can* be run.
+ac_fn_c_try_run ()
+{
+  as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+  if { { ac_try="$ac_link"
+case "(($ac_try" in
+  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+  *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+  (eval "$ac_link") 2>&5
+  ac_status=$?
+  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+  test $ac_status = 0; } && { ac_try='./conftest$ac_exeext'
+  { { case "(($ac_try" in
+  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+  *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+  (eval "$ac_try") 2>&5
+  ac_status=$?
+  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+  test $ac_status = 0; }; }; then :
+  ac_retval=0
+else
+  $as_echo "$as_me: program exited with status $ac_status" >&5
+       $as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+       ac_retval=$ac_status
+fi
+  rm -rf conftest.dSYM conftest_ipa8_conftest.oo
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+  as_fn_set_status $ac_retval
+
+} # ac_fn_c_try_run
+
+# ac_fn_c_check_header_compile LINENO HEADER VAR INCLUDES
+# -------------------------------------------------------
+# Tests whether HEADER exists and can be compiled using the include files in
+# INCLUDES, setting the cache variable VAR accordingly.
+ac_fn_c_check_header_compile ()
+{
+  as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+  { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
+$as_echo_n "checking for $2... " >&6; }
+if eval \${$3+:} false; then :
+  $as_echo_n "(cached) " >&6
+else
+  cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h.  */
+$4
+#include <$2>
 _ACEOF
-  exit
+if ac_fn_c_try_compile "$LINENO"; then :
+  eval "$3=yes"
+else
+  eval "$3=no"
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
 fi
+eval ac_res=\$$3
+	       { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
+$as_echo "$ac_res" >&6; }
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+
+} # ac_fn_c_check_header_compile
 cat >config.log <<_ACEOF
 This file contains any messages produced by compilers while
 running configure, to aid debugging if configure makes a mistake.
 
 It was created by $as_me, which was
-generated by GNU Autoconf 2.63.  Invocation command line was
+generated by GNU Autoconf 2.69.  Invocation command line was
 
   $ $0 $@
 
@@ -1438,8 +1703,8 @@
 do
   IFS=$as_save_IFS
   test -z "$as_dir" && as_dir=.
-  $as_echo "PATH: $as_dir"
-done
+    $as_echo "PATH: $as_dir"
+  done
 IFS=$as_save_IFS
 
 } >&5
@@ -1476,9 +1741,9 @@
       ac_arg=`$as_echo "$ac_arg" | sed "s/'/'\\\\\\\\''/g"` ;;
     esac
     case $ac_pass in
-    1) ac_configure_args0="$ac_configure_args0 '$ac_arg'" ;;
+    1) as_fn_append ac_configure_args0 " '$ac_arg'" ;;
     2)
-      ac_configure_args1="$ac_configure_args1 '$ac_arg'"
+      as_fn_append ac_configure_args1 " '$ac_arg'"
       if test $ac_must_keep_next = true; then
 	ac_must_keep_next=false # Got value, back to normal.
       else
@@ -1494,13 +1759,13 @@
 	  -* ) ac_must_keep_next=true ;;
 	esac
       fi
-      ac_configure_args="$ac_configure_args '$ac_arg'"
+      as_fn_append ac_configure_args " '$ac_arg'"
       ;;
     esac
   done
 done
-$as_unset ac_configure_args0 || test "${ac_configure_args0+set}" != set || { ac_configure_args0=; export ac_configure_args0; }
-$as_unset ac_configure_args1 || test "${ac_configure_args1+set}" != set || { ac_configure_args1=; export ac_configure_args1; }
+{ ac_configure_args0=; unset ac_configure_args0;}
+{ ac_configure_args1=; unset ac_configure_args1;}
 
 # When interrupted or exit'd, cleanup temporary files, and complete
 # config.log.  We remove comments because anyway the quotes in there
@@ -1512,11 +1777,9 @@
   {
     echo
 
-    cat <<\_ASBOX
-## ---------------- ##
+    $as_echo "## ---------------- ##
 ## Cache variables. ##
-## ---------------- ##
-_ASBOX
+## ---------------- ##"
     echo
     # The following way of writing the cache mishandles newlines in values,
 (
@@ -1525,13 +1788,13 @@
     case $ac_val in #(
     *${as_nl}*)
       case $ac_var in #(
-      *_cv_*) { $as_echo "$as_me:$LINENO: WARNING: cache variable $ac_var contains a newline" >&5
+      *_cv_*) { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: cache variable $ac_var contains a newline" >&5
 $as_echo "$as_me: WARNING: cache variable $ac_var contains a newline" >&2;} ;;
       esac
       case $ac_var in #(
       _ | IFS | as_nl) ;; #(
       BASH_ARGV | BASH_SOURCE) eval $ac_var= ;; #(
-      *) $as_unset $ac_var ;;
+      *) { eval $ac_var=; unset $ac_var;} ;;
       esac ;;
     esac
   done
@@ -1550,11 +1813,9 @@
 )
     echo
 
-    cat <<\_ASBOX
-## ----------------- ##
+    $as_echo "## ----------------- ##
 ## Output variables. ##
-## ----------------- ##
-_ASBOX
+## ----------------- ##"
     echo
     for ac_var in $ac_subst_vars
     do
@@ -1567,11 +1828,9 @@
     echo
 
     if test -n "$ac_subst_files"; then
-      cat <<\_ASBOX
-## ------------------- ##
+      $as_echo "## ------------------- ##
 ## File substitutions. ##
-## ------------------- ##
-_ASBOX
+## ------------------- ##"
       echo
       for ac_var in $ac_subst_files
       do
@@ -1585,11 +1844,9 @@
     fi
 
     if test -s confdefs.h; then
-      cat <<\_ASBOX
-## ----------- ##
+      $as_echo "## ----------- ##
 ## confdefs.h. ##
-## ----------- ##
-_ASBOX
+## ----------- ##"
       echo
       cat confdefs.h
       echo
@@ -1603,46 +1860,53 @@
     exit $exit_status
 ' 0
 for ac_signal in 1 2 13 15; do
-  trap 'ac_signal='$ac_signal'; { (exit 1); exit 1; }' $ac_signal
+  trap 'ac_signal='$ac_signal'; as_fn_exit 1' $ac_signal
 done
 ac_signal=0
 
 # confdefs.h avoids OS command line length limits that DEFS can exceed.
 rm -f -r conftest* confdefs.h
 
+$as_echo "/* confdefs.h */" > confdefs.h
+
 # Predefined preprocessor variables.
 
 cat >>confdefs.h <<_ACEOF
 #define PACKAGE_NAME "$PACKAGE_NAME"
 _ACEOF
 
-
 cat >>confdefs.h <<_ACEOF
 #define PACKAGE_TARNAME "$PACKAGE_TARNAME"
 _ACEOF
 
-
 cat >>confdefs.h <<_ACEOF
 #define PACKAGE_VERSION "$PACKAGE_VERSION"
 _ACEOF
 
-
 cat >>confdefs.h <<_ACEOF
 #define PACKAGE_STRING "$PACKAGE_STRING"
 _ACEOF
 
-
 cat >>confdefs.h <<_ACEOF
 #define PACKAGE_BUGREPORT "$PACKAGE_BUGREPORT"
 _ACEOF
 
+cat >>confdefs.h <<_ACEOF
+#define PACKAGE_URL "$PACKAGE_URL"
+_ACEOF
+
 
 # Let the site file select an alternate cache file if it wants to.
 # Prefer an explicitly selected file to automatically selected ones.
 ac_site_file1=NONE
 ac_site_file2=NONE
 if test -n "$CONFIG_SITE"; then
-  ac_site_file1=$CONFIG_SITE
+  # We do not want a PATH search for config.site.
+  case $CONFIG_SITE in #((
+    -*)  ac_site_file1=./$CONFIG_SITE;;
+    */*) ac_site_file1=$CONFIG_SITE;;
+    *)   ac_site_file1=./$CONFIG_SITE;;
+  esac
 elif test "x$prefix" != xNONE; then
   ac_site_file1=$prefix/share/config.site
   ac_site_file2=$prefix/etc/config.site
@@ -1653,19 +1917,23 @@
 for ac_site_file in "$ac_site_file1" "$ac_site_file2"
 do
   test "x$ac_site_file" = xNONE && continue
-  if test -r "$ac_site_file"; then
-    { $as_echo "$as_me:$LINENO: loading site script $ac_site_file" >&5
+  if test /dev/null != "$ac_site_file" && test -r "$ac_site_file"; then
+    { $as_echo "$as_me:${as_lineno-$LINENO}: loading site script $ac_site_file" >&5
 $as_echo "$as_me: loading site script $ac_site_file" >&6;}
     sed 's/^/| /' "$ac_site_file" >&5
-    . "$ac_site_file"
+    . "$ac_site_file" \
+      || { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error $? "failed to load site script $ac_site_file
+See \`config.log' for more details" "$LINENO" 5; }
   fi
 done
 
 if test -r "$cache_file"; then
-  # Some versions of bash will fail to source /dev/null (special
-  # files actually), so we avoid doing that.
-  if test -f "$cache_file"; then
-    { $as_echo "$as_me:$LINENO: loading cache $cache_file" >&5
+  # Some versions of bash will fail to source /dev/null (special files
+  # actually), so we avoid doing that.  DJGPP emulates it as a regular file.
+  if test /dev/null != "$cache_file" && test -f "$cache_file"; then
+    { $as_echo "$as_me:${as_lineno-$LINENO}: loading cache $cache_file" >&5
 $as_echo "$as_me: loading cache $cache_file" >&6;}
     case $cache_file in
       [\\/]* | ?:[\\/]* ) . "$cache_file";;
@@ -1673,7 +1941,7 @@
     esac
   fi
 else
-  { $as_echo "$as_me:$LINENO: creating cache $cache_file" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: creating cache $cache_file" >&5
 $as_echo "$as_me: creating cache $cache_file" >&6;}
   >$cache_file
 fi
@@ -1688,11 +1956,11 @@
   eval ac_new_val=\$ac_env_${ac_var}_value
   case $ac_old_set,$ac_new_set in
     set,)
-      { $as_echo "$as_me:$LINENO: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&5
+      { $as_echo "$as_me:${as_lineno-$LINENO}: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&5
 $as_echo "$as_me: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&2;}
       ac_cache_corrupted=: ;;
     ,set)
-      { $as_echo "$as_me:$LINENO: error: \`$ac_var' was not set in the previous run" >&5
+      { $as_echo "$as_me:${as_lineno-$LINENO}: error: \`$ac_var' was not set in the previous run" >&5
 $as_echo "$as_me: error: \`$ac_var' was not set in the previous run" >&2;}
       ac_cache_corrupted=: ;;
     ,);;
@@ -1702,17 +1970,17 @@
 	ac_old_val_w=`echo x $ac_old_val`
 	ac_new_val_w=`echo x $ac_new_val`
 	if test "$ac_old_val_w" != "$ac_new_val_w"; then
-	  { $as_echo "$as_me:$LINENO: error: \`$ac_var' has changed since the previous run:" >&5
+	  { $as_echo "$as_me:${as_lineno-$LINENO}: error: \`$ac_var' has changed since the previous run:" >&5
 $as_echo "$as_me: error: \`$ac_var' has changed since the previous run:" >&2;}
 	  ac_cache_corrupted=:
 	else
-	  { $as_echo "$as_me:$LINENO: warning: ignoring whitespace changes in \`$ac_var' since the previous run:" >&5
+	  { $as_echo "$as_me:${as_lineno-$LINENO}: warning: ignoring whitespace changes in \`$ac_var' since the previous run:" >&5
 $as_echo "$as_me: warning: ignoring whitespace changes in \`$ac_var' since the previous run:" >&2;}
 	  eval $ac_var=\$ac_old_val
 	fi
-	{ $as_echo "$as_me:$LINENO:   former value:  \`$ac_old_val'" >&5
+	{ $as_echo "$as_me:${as_lineno-$LINENO}:   former value:  \`$ac_old_val'" >&5
 $as_echo "$as_me:   former value:  \`$ac_old_val'" >&2;}
-	{ $as_echo "$as_me:$LINENO:   current value: \`$ac_new_val'" >&5
+	{ $as_echo "$as_me:${as_lineno-$LINENO}:   current value: \`$ac_new_val'" >&5
 $as_echo "$as_me:   current value: \`$ac_new_val'" >&2;}
       fi;;
   esac
@@ -1724,35 +1992,20 @@
     esac
     case " $ac_configure_args " in
       *" '$ac_arg' "*) ;; # Avoid dups.  Use of quotes ensures accuracy.
-      *) ac_configure_args="$ac_configure_args '$ac_arg'" ;;
+      *) as_fn_append ac_configure_args " '$ac_arg'" ;;
     esac
   fi
 done
 if $ac_cache_corrupted; then
-  { $as_echo "$as_me:$LINENO: error: in \`$ac_pwd':" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-  { $as_echo "$as_me:$LINENO: error: changes in the environment can compromise the build" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: error: changes in the environment can compromise the build" >&5
 $as_echo "$as_me: error: changes in the environment can compromise the build" >&2;}
-  { { $as_echo "$as_me:$LINENO: error: run \`make distclean' and/or \`rm $cache_file' and start over" >&5
-$as_echo "$as_me: error: run \`make distclean' and/or \`rm $cache_file' and start over" >&2;}
-   { (exit 1); exit 1; }; }
+  as_fn_error $? "run \`make distclean' and/or \`rm $cache_file' and start over" "$LINENO" 5
 fi
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
+## -------------------- ##
+## Main body of script. ##
+## -------------------- ##
 
 ac_ext=c
 ac_cpp='$CPP $CPPFLAGS'
@@ -1772,9 +2025,9 @@
 if test -n "$ac_tool_prefix"; then
   # Extract the first word of "${ac_tool_prefix}gcc", so it can be a program name with args.
 set dummy ${ac_tool_prefix}gcc; ac_word=$2
-{ $as_echo "$as_me:$LINENO: checking for $ac_word" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_CC+set}" = set; then
+if ${ac_cv_prog_CC+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$CC"; then
@@ -1785,24 +2038,24 @@
 do
   IFS=$as_save_IFS
   test -z "$as_dir" && as_dir=.
-  for ac_exec_ext in '' $ac_executable_extensions; do
-  if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
+    for ac_exec_ext in '' $ac_executable_extensions; do
+  if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
     ac_cv_prog_CC="${ac_tool_prefix}gcc"
-    $as_echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+    $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
     break 2
   fi
 done
-done
+  done
 IFS=$as_save_IFS
 
 fi
 fi
 CC=$ac_cv_prog_CC
 if test -n "$CC"; then
-  { $as_echo "$as_me:$LINENO: result: $CC" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
 $as_echo "$CC" >&6; }
 else
-  { $as_echo "$as_me:$LINENO: result: no" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
 $as_echo "no" >&6; }
 fi
 
@@ -1812,9 +2065,9 @@
   ac_ct_CC=$CC
   # Extract the first word of "gcc", so it can be a program name with args.
 set dummy gcc; ac_word=$2
-{ $as_echo "$as_me:$LINENO: checking for $ac_word" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_ac_ct_CC+set}" = set; then
+if ${ac_cv_prog_ac_ct_CC+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$ac_ct_CC"; then
@@ -1825,24 +2078,24 @@
 do
   IFS=$as_save_IFS
   test -z "$as_dir" && as_dir=.
-  for ac_exec_ext in '' $ac_executable_extensions; do
-  if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
+    for ac_exec_ext in '' $ac_executable_extensions; do
+  if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
     ac_cv_prog_ac_ct_CC="gcc"
-    $as_echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+    $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
     break 2
   fi
 done
-done
+  done
 IFS=$as_save_IFS
 
 fi
 fi
 ac_ct_CC=$ac_cv_prog_ac_ct_CC
 if test -n "$ac_ct_CC"; then
-  { $as_echo "$as_me:$LINENO: result: $ac_ct_CC" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_CC" >&5
 $as_echo "$ac_ct_CC" >&6; }
 else
-  { $as_echo "$as_me:$LINENO: result: no" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
 $as_echo "no" >&6; }
 fi
 
@@ -1851,7 +2104,7 @@
   else
     case $cross_compiling:$ac_tool_warned in
 yes:)
-{ $as_echo "$as_me:$LINENO: WARNING: using cross tools not prefixed with host triplet" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
 $as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
 ac_tool_warned=yes ;;
 esac
@@ -1865,9 +2118,9 @@
           if test -n "$ac_tool_prefix"; then
     # Extract the first word of "${ac_tool_prefix}cc", so it can be a program name with args.
 set dummy ${ac_tool_prefix}cc; ac_word=$2
-{ $as_echo "$as_me:$LINENO: checking for $ac_word" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_CC+set}" = set; then
+if ${ac_cv_prog_CC+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$CC"; then
@@ -1878,24 +2131,24 @@
 do
   IFS=$as_save_IFS
   test -z "$as_dir" && as_dir=.
-  for ac_exec_ext in '' $ac_executable_extensions; do
-  if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
+    for ac_exec_ext in '' $ac_executable_extensions; do
+  if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
     ac_cv_prog_CC="${ac_tool_prefix}cc"
-    $as_echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+    $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
     break 2
   fi
 done
-done
+  done
 IFS=$as_save_IFS
 
 fi
 fi
 CC=$ac_cv_prog_CC
 if test -n "$CC"; then
-  { $as_echo "$as_me:$LINENO: result: $CC" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
 $as_echo "$CC" >&6; }
 else
-  { $as_echo "$as_me:$LINENO: result: no" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
 $as_echo "no" >&6; }
 fi
 
@@ -1905,9 +2158,9 @@
 if test -z "$CC"; then
   # Extract the first word of "cc", so it can be a program name with args.
 set dummy cc; ac_word=$2
-{ $as_echo "$as_me:$LINENO: checking for $ac_word" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_CC+set}" = set; then
+if ${ac_cv_prog_CC+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$CC"; then
@@ -1919,18 +2172,18 @@
 do
   IFS=$as_save_IFS
   test -z "$as_dir" && as_dir=.
-  for ac_exec_ext in '' $ac_executable_extensions; do
-  if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
+    for ac_exec_ext in '' $ac_executable_extensions; do
+  if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
     if test "$as_dir/$ac_word$ac_exec_ext" = "/usr/ucb/cc"; then
        ac_prog_rejected=yes
        continue
      fi
     ac_cv_prog_CC="cc"
-    $as_echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+    $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
     break 2
   fi
 done
-done
+  done
 IFS=$as_save_IFS
 
 if test $ac_prog_rejected = yes; then
@@ -1949,10 +2202,10 @@
 fi
 CC=$ac_cv_prog_CC
 if test -n "$CC"; then
-  { $as_echo "$as_me:$LINENO: result: $CC" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
 $as_echo "$CC" >&6; }
 else
-  { $as_echo "$as_me:$LINENO: result: no" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
 $as_echo "no" >&6; }
 fi
 
@@ -1964,9 +2217,9 @@
   do
     # Extract the first word of "$ac_tool_prefix$ac_prog", so it can be a program name with args.
 set dummy $ac_tool_prefix$ac_prog; ac_word=$2
-{ $as_echo "$as_me:$LINENO: checking for $ac_word" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_CC+set}" = set; then
+if ${ac_cv_prog_CC+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$CC"; then
@@ -1977,24 +2230,24 @@
 do
   IFS=$as_save_IFS
   test -z "$as_dir" && as_dir=.
-  for ac_exec_ext in '' $ac_executable_extensions; do
-  if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
+    for ac_exec_ext in '' $ac_executable_extensions; do
+  if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
     ac_cv_prog_CC="$ac_tool_prefix$ac_prog"
-    $as_echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+    $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
     break 2
   fi
 done
-done
+  done
 IFS=$as_save_IFS
 
 fi
 fi
 CC=$ac_cv_prog_CC
 if test -n "$CC"; then
-  { $as_echo "$as_me:$LINENO: result: $CC" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
 $as_echo "$CC" >&6; }
 else
-  { $as_echo "$as_me:$LINENO: result: no" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
 $as_echo "no" >&6; }
 fi
 
@@ -2008,9 +2261,9 @@
 do
   # Extract the first word of "$ac_prog", so it can be a program name with args.
 set dummy $ac_prog; ac_word=$2
-{ $as_echo "$as_me:$LINENO: checking for $ac_word" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_ac_ct_CC+set}" = set; then
+if ${ac_cv_prog_ac_ct_CC+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$ac_ct_CC"; then
@@ -2021,24 +2274,24 @@
 do
   IFS=$as_save_IFS
   test -z "$as_dir" && as_dir=.
-  for ac_exec_ext in '' $ac_executable_extensions; do
-  if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
+    for ac_exec_ext in '' $ac_executable_extensions; do
+  if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
     ac_cv_prog_ac_ct_CC="$ac_prog"
-    $as_echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+    $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
     break 2
   fi
 done
-done
+  done
 IFS=$as_save_IFS
 
 fi
 fi
 ac_ct_CC=$ac_cv_prog_ac_ct_CC
 if test -n "$ac_ct_CC"; then
-  { $as_echo "$as_me:$LINENO: result: $ac_ct_CC" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_CC" >&5
 $as_echo "$ac_ct_CC" >&6; }
 else
-  { $as_echo "$as_me:$LINENO: result: no" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
 $as_echo "no" >&6; }
 fi
 
@@ -2051,7 +2304,7 @@
   else
     case $cross_compiling:$ac_tool_warned in
 yes:)
-{ $as_echo "$as_me:$LINENO: WARNING: using cross tools not prefixed with host triplet" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
 $as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
 ac_tool_warned=yes ;;
 esac
@@ -2062,57 +2315,37 @@
 fi
 
 
-test -z "$CC" && { { $as_echo "$as_me:$LINENO: error: in \`$ac_pwd':" >&5
+test -z "$CC" && { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-{ { $as_echo "$as_me:$LINENO: error: no acceptable C compiler found in \$PATH
-See \`config.log' for more details." >&5
-$as_echo "$as_me: error: no acceptable C compiler found in \$PATH
-See \`config.log' for more details." >&2;}
-   { (exit 1); exit 1; }; }; }
+as_fn_error $? "no acceptable C compiler found in \$PATH
+See \`config.log' for more details" "$LINENO" 5; }
 
 # Provide some information about the compiler.
-$as_echo "$as_me:$LINENO: checking for C compiler version" >&5
+$as_echo "$as_me:${as_lineno-$LINENO}: checking for C compiler version" >&5
 set X $ac_compile
 ac_compiler=$2
-{ (ac_try="$ac_compiler --version >&5"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_compiler --version >&5") 2>&5
-  ac_status=$?
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); }
-{ (ac_try="$ac_compiler -v >&5"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_compiler -v >&5") 2>&5
-  ac_status=$?
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); }
-{ (ac_try="$ac_compiler -V >&5"
+for ac_option in --version -v -V -qversion; do
+  { { ac_try="$ac_compiler $ac_option >&5"
 case "(($ac_try" in
   *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
   *) ac_try_echo=$ac_try;;
 esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_compiler -V >&5") 2>&5
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+  (eval "$ac_compiler $ac_option >&5") 2>conftest.err
   ac_status=$?
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); }
+  if test -s conftest.err; then
+    sed '10a\
+... rest of stderr output deleted ...
+         10q' conftest.err >conftest.er1
+    cat conftest.er1 >&5
+  fi
+  rm -f conftest.er1 conftest.err
+  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+  test $ac_status = 0; }
+done
 
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 
 int
@@ -2128,8 +2361,8 @@
 # Try to create an executable without -o first, disregard a.out.
 # It will help us diagnose broken compilers, and finding out an intuition
 # of exeext.
-{ $as_echo "$as_me:$LINENO: checking for C compiler default output file name" >&5
-$as_echo_n "checking for C compiler default output file name... " >&6; }
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether the C compiler works" >&5
+$as_echo_n "checking whether the C compiler works... " >&6; }
 ac_link_default=`$as_echo "$ac_link" | sed 's/ -o *conftest[^ ]*//'`
 
 # The possible output files:
@@ -2145,17 +2378,17 @@
 done
 rm -f $ac_rmfiles
 
-if { (ac_try="$ac_link_default"
+if { { ac_try="$ac_link_default"
 case "(($ac_try" in
   *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
   *) ac_try_echo=$ac_try;;
 esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
   (eval "$ac_link_default") 2>&5
   ac_status=$?
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); }; then
+  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+  test $ac_status = 0; }; then :
   # Autoconf-2.13 could set the ac_cv_exeext variable to `no'.
 # So ignore a value of `no', otherwise this would lead to `EXEEXT = no'
 # in a Makefile.  We should not override ac_cv_exeext if it was cached,
@@ -2172,7 +2405,7 @@
 	# certainly right.
 	break;;
     *.* )
-        if test "${ac_cv_exeext+set}" = set && test "$ac_cv_exeext" != no;
+	if test "${ac_cv_exeext+set}" = set && test "$ac_cv_exeext" != no;
 	then :; else
 	   ac_cv_exeext=`expr "$ac_file" : '[^.]*\(\..*\)'`
 	fi
@@ -2191,84 +2424,41 @@
 else
   ac_file=''
 fi
-
-{ $as_echo "$as_me:$LINENO: result: $ac_file" >&5
-$as_echo "$ac_file" >&6; }
-if test -z "$ac_file"; then
-  $as_echo "$as_me: failed program was:" >&5
+if test -z "$ac_file"; then :
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+$as_echo "$as_me: failed program was:" >&5
 sed 's/^/| /' conftest.$ac_ext >&5
 
-{ { $as_echo "$as_me:$LINENO: error: in \`$ac_pwd':" >&5
+{ { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-{ { $as_echo "$as_me:$LINENO: error: C compiler cannot create executables
-See \`config.log' for more details." >&5
-$as_echo "$as_me: error: C compiler cannot create executables
-See \`config.log' for more details." >&2;}
-   { (exit 77); exit 77; }; }; }
+as_fn_error 77 "C compiler cannot create executables
+See \`config.log' for more details" "$LINENO" 5; }
+else
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
 fi
-
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for C compiler default output file name" >&5
+$as_echo_n "checking for C compiler default output file name... " >&6; }
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_file" >&5
+$as_echo "$ac_file" >&6; }
 ac_exeext=$ac_cv_exeext
 
-# Check that the compiler produces executables we can run.  If not, either
-# the compiler is broken, or we cross compile.
-{ $as_echo "$as_me:$LINENO: checking whether the C compiler works" >&5
-$as_echo_n "checking whether the C compiler works... " >&6; }
-# FIXME: These cross compiler hacks should be removed for Autoconf 3.0
-# If not cross compiling, check that we can run a simple program.
-if test "$cross_compiling" != yes; then
-  if { ac_try='./$ac_file'
-  { (case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_try") 2>&5
-  ac_status=$?
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); }; }; then
-    cross_compiling=no
-  else
-    if test "$cross_compiling" = maybe; then
-	cross_compiling=yes
-    else
-	{ { $as_echo "$as_me:$LINENO: error: in \`$ac_pwd':" >&5
-$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-{ { $as_echo "$as_me:$LINENO: error: cannot run C compiled programs.
-If you meant to cross compile, use \`--host'.
-See \`config.log' for more details." >&5
-$as_echo "$as_me: error: cannot run C compiled programs.
-If you meant to cross compile, use \`--host'.
-See \`config.log' for more details." >&2;}
-   { (exit 1); exit 1; }; }; }
-    fi
-  fi
-fi
-{ $as_echo "$as_me:$LINENO: result: yes" >&5
-$as_echo "yes" >&6; }
-
 rm -f -r a.out a.out.dSYM a.exe conftest$ac_cv_exeext b.out
 ac_clean_files=$ac_clean_files_save
-# Check that the compiler produces executables we can run.  If not, either
-# the compiler is broken, or we cross compile.
-{ $as_echo "$as_me:$LINENO: checking whether we are cross compiling" >&5
-$as_echo_n "checking whether we are cross compiling... " >&6; }
-{ $as_echo "$as_me:$LINENO: result: $cross_compiling" >&5
-$as_echo "$cross_compiling" >&6; }
-
-{ $as_echo "$as_me:$LINENO: checking for suffix of executables" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for suffix of executables" >&5
 $as_echo_n "checking for suffix of executables... " >&6; }
-if { (ac_try="$ac_link"
+if { { ac_try="$ac_link"
 case "(($ac_try" in
   *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
   *) ac_try_echo=$ac_try;;
 esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
   (eval "$ac_link") 2>&5
   ac_status=$?
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); }; then
+  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+  test $ac_status = 0; }; then :
   # If both `conftest.exe' and `conftest' are `present' (well, observable)
 # catch `conftest.exe'.  For instance with Cygwin, `ls conftest' will
 # work properly (i.e., refer to `conftest.exe'), while it won't with
@@ -2283,32 +2473,83 @@
   esac
 done
 else
-  { { $as_echo "$as_me:$LINENO: error: in \`$ac_pwd':" >&5
+  { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-{ { $as_echo "$as_me:$LINENO: error: cannot compute suffix of executables: cannot compile and link
-See \`config.log' for more details." >&5
-$as_echo "$as_me: error: cannot compute suffix of executables: cannot compile and link
-See \`config.log' for more details." >&2;}
-   { (exit 1); exit 1; }; }; }
+as_fn_error $? "cannot compute suffix of executables: cannot compile and link
+See \`config.log' for more details" "$LINENO" 5; }
 fi
-
-rm -f conftest$ac_cv_exeext
-{ $as_echo "$as_me:$LINENO: result: $ac_cv_exeext" >&5
+rm -f conftest conftest$ac_cv_exeext
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_exeext" >&5
 $as_echo "$ac_cv_exeext" >&6; }
 
 rm -f conftest.$ac_ext
 EXEEXT=$ac_cv_exeext
 ac_exeext=$EXEEXT
-{ $as_echo "$as_me:$LINENO: checking for suffix of object files" >&5
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h.  */
+#include <stdio.h>
+int
+main ()
+{
+FILE *f = fopen ("conftest.out", "w");
+ return ferror (f) || fclose (f) != 0;
+
+  ;
+  return 0;
+}
+_ACEOF
+ac_clean_files="$ac_clean_files conftest.out"
+# Check that the compiler produces executables we can run.  If not, either
+# the compiler is broken, or we cross compile.
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are cross compiling" >&5
+$as_echo_n "checking whether we are cross compiling... " >&6; }
+if test "$cross_compiling" != yes; then
+  { { ac_try="$ac_link"
+case "(($ac_try" in
+  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+  *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+  (eval "$ac_link") 2>&5
+  ac_status=$?
+  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+  test $ac_status = 0; }
+  if { ac_try='./conftest$ac_cv_exeext'
+  { { case "(($ac_try" in
+  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+  *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+  (eval "$ac_try") 2>&5
+  ac_status=$?
+  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+  test $ac_status = 0; }; }; then
+    cross_compiling=no
+  else
+    if test "$cross_compiling" = maybe; then
+	cross_compiling=yes
+    else
+	{ { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error $? "cannot run C compiled programs.
+If you meant to cross compile, use \`--host'.
+See \`config.log' for more details" "$LINENO" 5; }
+    fi
+  fi
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $cross_compiling" >&5
+$as_echo "$cross_compiling" >&6; }
+
+rm -f conftest.$ac_ext conftest$ac_cv_exeext conftest.out
+ac_clean_files=$ac_clean_files_save
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for suffix of object files" >&5
 $as_echo_n "checking for suffix of object files... " >&6; }
-if test "${ac_cv_objext+set}" = set; then
+if ${ac_cv_objext+:} false; then :
   $as_echo_n "(cached) " >&6
 else
-  cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+  cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 
 int
@@ -2320,17 +2561,17 @@
 }
 _ACEOF
 rm -f conftest.o conftest.obj
-if { (ac_try="$ac_compile"
+if { { ac_try="$ac_compile"
 case "(($ac_try" in
   *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
   *) ac_try_echo=$ac_try;;
 esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
   (eval "$ac_compile") 2>&5
   ac_status=$?
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); }; then
+  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+  test $ac_status = 0; }; then :
   for ac_file in conftest.o conftest.obj conftest.*; do
   test -f "$ac_file" || continue;
   case $ac_file in
@@ -2343,31 +2584,23 @@
   $as_echo "$as_me: failed program was:" >&5
 sed 's/^/| /' conftest.$ac_ext >&5
 
-{ { $as_echo "$as_me:$LINENO: error: in \`$ac_pwd':" >&5
+{ { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-{ { $as_echo "$as_me:$LINENO: error: cannot compute suffix of object files: cannot compile
-See \`config.log' for more details." >&5
-$as_echo "$as_me: error: cannot compute suffix of object files: cannot compile
-See \`config.log' for more details." >&2;}
-   { (exit 1); exit 1; }; }; }
+as_fn_error $? "cannot compute suffix of object files: cannot compile
+See \`config.log' for more details" "$LINENO" 5; }
 fi
-
 rm -f conftest.$ac_cv_objext conftest.$ac_ext
 fi
-{ $as_echo "$as_me:$LINENO: result: $ac_cv_objext" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_objext" >&5
 $as_echo "$ac_cv_objext" >&6; }
 OBJEXT=$ac_cv_objext
 ac_objext=$OBJEXT
-{ $as_echo "$as_me:$LINENO: checking whether we are using the GNU C compiler" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are using the GNU C compiler" >&5
 $as_echo_n "checking whether we are using the GNU C compiler... " >&6; }
-if test "${ac_cv_c_compiler_gnu+set}" = set; then
+if ${ac_cv_c_compiler_gnu+:} false; then :
   $as_echo_n "(cached) " >&6
 else
-  cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+  cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 
 int
@@ -2381,37 +2614,16 @@
   return 0;
 }
 _ACEOF
-rm -f conftest.$ac_objext
-if { (ac_try="$ac_compile"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_compile") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } && {
-	 test -z "$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       } && test -s conftest.$ac_objext; then
+if ac_fn_c_try_compile "$LINENO"; then :
   ac_compiler_gnu=yes
 else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-	ac_compiler_gnu=no
+  ac_compiler_gnu=no
 fi
-
 rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
 ac_cv_c_compiler_gnu=$ac_compiler_gnu
 
 fi
-{ $as_echo "$as_me:$LINENO: result: $ac_cv_c_compiler_gnu" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_c_compiler_gnu" >&5
 $as_echo "$ac_cv_c_compiler_gnu" >&6; }
 if test $ac_compiler_gnu = yes; then
   GCC=yes
@@ -2420,20 +2632,16 @@
 fi
 ac_test_CFLAGS=${CFLAGS+set}
 ac_save_CFLAGS=$CFLAGS
-{ $as_echo "$as_me:$LINENO: checking whether $CC accepts -g" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether $CC accepts -g" >&5
 $as_echo_n "checking whether $CC accepts -g... " >&6; }
-if test "${ac_cv_prog_cc_g+set}" = set; then
+if ${ac_cv_prog_cc_g+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_save_c_werror_flag=$ac_c_werror_flag
    ac_c_werror_flag=yes
    ac_cv_prog_cc_g=no
    CFLAGS="-g"
-   cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 
 int
@@ -2444,35 +2652,11 @@
   return 0;
 }
 _ACEOF
-rm -f conftest.$ac_objext
-if { (ac_try="$ac_compile"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_compile") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } && {
-	 test -z "$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       } && test -s conftest.$ac_objext; then
+if ac_fn_c_try_compile "$LINENO"; then :
   ac_cv_prog_cc_g=yes
 else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-	CFLAGS=""
-      cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+  CFLAGS=""
+      cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 
 int
@@ -2483,36 +2667,12 @@
   return 0;
 }
 _ACEOF
-rm -f conftest.$ac_objext
-if { (ac_try="$ac_compile"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_compile") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } && {
-	 test -z "$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       } && test -s conftest.$ac_objext; then
-  :
-else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
+if ac_fn_c_try_compile "$LINENO"; then :
 
-	ac_c_werror_flag=$ac_save_c_werror_flag
+else
+  ac_c_werror_flag=$ac_save_c_werror_flag
 	 CFLAGS="-g"
-	 cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+	 cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 
 int
@@ -2523,42 +2683,17 @@
   return 0;
 }
 _ACEOF
-rm -f conftest.$ac_objext
-if { (ac_try="$ac_compile"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_compile") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } && {
-	 test -z "$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       } && test -s conftest.$ac_objext; then
+if ac_fn_c_try_compile "$LINENO"; then :
   ac_cv_prog_cc_g=yes
-else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-
 fi
-
 rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
 fi
-
 rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
 fi
-
 rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
    ac_c_werror_flag=$ac_save_c_werror_flag
 fi
-{ $as_echo "$as_me:$LINENO: result: $ac_cv_prog_cc_g" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_prog_cc_g" >&5
 $as_echo "$ac_cv_prog_cc_g" >&6; }
 if test "$ac_test_CFLAGS" = set; then
   CFLAGS=$ac_save_CFLAGS
@@ -2575,23 +2710,18 @@
     CFLAGS=
   fi
 fi
-{ $as_echo "$as_me:$LINENO: checking for $CC option to accept ISO C89" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $CC option to accept ISO C89" >&5
 $as_echo_n "checking for $CC option to accept ISO C89... " >&6; }
-if test "${ac_cv_prog_cc_c89+set}" = set; then
+if ${ac_cv_prog_cc_c89+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_cv_prog_cc_c89=no
 ac_save_CC=$CC
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 #include <stdarg.h>
 #include <stdio.h>
-#include <sys/types.h>
-#include <sys/stat.h>
+struct stat;
 /* Most of the following tests are stolen from RCS 5.7's src/conf.sh.  */
 struct buf { int x; };
 FILE * (*rcsopen) (struct buf *, struct stat *, int);
@@ -2638,37 +2768,14 @@
   ;
   return 0;
 }
-_ACEOF
-for ac_arg in '' -qlanglvl=extc89 -qlanglvl=ansi -std \
-	-Ae "-Aa -D_HPUX_SOURCE" "-Xc -D__EXTENSIONS__"
-do
-  CC="$ac_save_CC $ac_arg"
-  rm -f conftest.$ac_objext
-if { (ac_try="$ac_compile"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_compile") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } && {
-	 test -z "$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       } && test -s conftest.$ac_objext; then
+_ACEOF
+for ac_arg in '' -qlanglvl=extc89 -qlanglvl=ansi -std \
+	-Ae "-Aa -D_HPUX_SOURCE" "-Xc -D__EXTENSIONS__"
+do
+  CC="$ac_save_CC $ac_arg"
+  if ac_fn_c_try_compile "$LINENO"; then :
   ac_cv_prog_cc_c89=$ac_arg
-else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-
 fi
-
 rm -f core conftest.err conftest.$ac_objext
   test "x$ac_cv_prog_cc_c89" != "xno" && break
 done
@@ -2679,17 +2786,19 @@
 # AC_CACHE_VAL
 case "x$ac_cv_prog_cc_c89" in
   x)
-    { $as_echo "$as_me:$LINENO: result: none needed" >&5
+    { $as_echo "$as_me:${as_lineno-$LINENO}: result: none needed" >&5
 $as_echo "none needed" >&6; } ;;
   xno)
-    { $as_echo "$as_me:$LINENO: result: unsupported" >&5
+    { $as_echo "$as_me:${as_lineno-$LINENO}: result: unsupported" >&5
 $as_echo "unsupported" >&6; } ;;
   *)
     CC="$CC $ac_cv_prog_cc_c89"
-    { $as_echo "$as_me:$LINENO: result: $ac_cv_prog_cc_c89" >&5
+    { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_prog_cc_c89" >&5
 $as_echo "$ac_cv_prog_cc_c89" >&6; } ;;
 esac
+if test "x$ac_cv_prog_cc_c89" != xno; then :
 
+fi
 
 ac_ext=c
 ac_cpp='$CPP $CPPFLAGS'
@@ -2703,14 +2812,14 @@
 ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
 ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
 ac_compiler_gnu=$ac_cv_c_compiler_gnu
-{ $as_echo "$as_me:$LINENO: checking how to run the C preprocessor" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking how to run the C preprocessor" >&5
 $as_echo_n "checking how to run the C preprocessor... " >&6; }
 # On Suns, sometimes $CPP names a directory.
 if test -n "$CPP" && test -d "$CPP"; then
   CPP=
 fi
 if test -z "$CPP"; then
-  if test "${ac_cv_prog_CPP+set}" = set; then
+  if ${ac_cv_prog_CPP+:} false; then :
   $as_echo_n "(cached) " >&6
 else
       # Double quotes because CPP needs to be expanded
@@ -2725,11 +2834,7 @@
   # <limits.h> exists even on freestanding compilers.
   # On the NeXT, cc -E runs the code through the compiler's parser,
   # not just through cpp. "Syntax error" is here to catch this case.
-  cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+  cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 #ifdef __STDC__
 # include <limits.h>
@@ -2738,78 +2843,34 @@
 #endif
 		     Syntax error
 _ACEOF
-if { (ac_try="$ac_cpp conftest.$ac_ext"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_cpp conftest.$ac_ext") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } >/dev/null && {
-	 test -z "$ac_c_preproc_warn_flag$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       }; then
-  :
-else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
+if ac_fn_c_try_cpp "$LINENO"; then :
 
+else
   # Broken: fails on valid input.
 continue
 fi
-
-rm -f conftest.err conftest.$ac_ext
+rm -f conftest.err conftest.i conftest.$ac_ext
 
   # OK, works on sane cases.  Now check whether nonexistent headers
   # can be detected and how.
-  cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+  cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 #include <ac_nonexistent.h>
 _ACEOF
-if { (ac_try="$ac_cpp conftest.$ac_ext"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_cpp conftest.$ac_ext") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } >/dev/null && {
-	 test -z "$ac_c_preproc_warn_flag$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       }; then
+if ac_fn_c_try_cpp "$LINENO"; then :
   # Broken: success on invalid input.
 continue
 else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
   # Passes both tests.
 ac_preproc_ok=:
 break
 fi
-
-rm -f conftest.err conftest.$ac_ext
+rm -f conftest.err conftest.i conftest.$ac_ext
 
 done
 # Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped.
-rm -f conftest.err conftest.$ac_ext
-if $ac_preproc_ok; then
+rm -f conftest.i conftest.err conftest.$ac_ext
+if $ac_preproc_ok; then :
   break
 fi
 
@@ -2821,7 +2882,7 @@
 else
   ac_cv_prog_CPP=$CPP
 fi
-{ $as_echo "$as_me:$LINENO: result: $CPP" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $CPP" >&5
 $as_echo "$CPP" >&6; }
 ac_preproc_ok=false
 for ac_c_preproc_warn_flag in '' yes
@@ -2832,11 +2893,7 @@
   # <limits.h> exists even on freestanding compilers.
   # On the NeXT, cc -E runs the code through the compiler's parser,
   # not just through cpp. "Syntax error" is here to catch this case.
-  cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+  cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 #ifdef __STDC__
 # include <limits.h>
@@ -2845,87 +2902,40 @@
 #endif
 		     Syntax error
 _ACEOF
-if { (ac_try="$ac_cpp conftest.$ac_ext"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_cpp conftest.$ac_ext") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } >/dev/null && {
-	 test -z "$ac_c_preproc_warn_flag$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       }; then
-  :
-else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
+if ac_fn_c_try_cpp "$LINENO"; then :
 
+else
   # Broken: fails on valid input.
 continue
 fi
-
-rm -f conftest.err conftest.$ac_ext
+rm -f conftest.err conftest.i conftest.$ac_ext
 
   # OK, works on sane cases.  Now check whether nonexistent headers
   # can be detected and how.
-  cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+  cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 #include <ac_nonexistent.h>
 _ACEOF
-if { (ac_try="$ac_cpp conftest.$ac_ext"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_cpp conftest.$ac_ext") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } >/dev/null && {
-	 test -z "$ac_c_preproc_warn_flag$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       }; then
+if ac_fn_c_try_cpp "$LINENO"; then :
   # Broken: success on invalid input.
 continue
 else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
   # Passes both tests.
 ac_preproc_ok=:
 break
 fi
-
-rm -f conftest.err conftest.$ac_ext
+rm -f conftest.err conftest.i conftest.$ac_ext
 
 done
 # Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped.
-rm -f conftest.err conftest.$ac_ext
-if $ac_preproc_ok; then
-  :
+rm -f conftest.i conftest.err conftest.$ac_ext
+if $ac_preproc_ok; then :
+
 else
-  { { $as_echo "$as_me:$LINENO: error: in \`$ac_pwd':" >&5
+  { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-{ { $as_echo "$as_me:$LINENO: error: C preprocessor \"$CPP\" fails sanity check
-See \`config.log' for more details." >&5
-$as_echo "$as_me: error: C preprocessor \"$CPP\" fails sanity check
-See \`config.log' for more details." >&2;}
-   { (exit 1); exit 1; }; }; }
+as_fn_error $? "C preprocessor \"$CPP\" fails sanity check
+See \`config.log' for more details" "$LINENO" 5; }
 fi
 
 ac_ext=c
@@ -2935,9 +2945,9 @@
 ac_compiler_gnu=$ac_cv_c_compiler_gnu
 
 
-{ $as_echo "$as_me:$LINENO: checking for grep that handles long lines and -e" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for grep that handles long lines and -e" >&5
 $as_echo_n "checking for grep that handles long lines and -e... " >&6; }
-if test "${ac_cv_path_GREP+set}" = set; then
+if ${ac_cv_path_GREP+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -z "$GREP"; then
@@ -2948,10 +2958,10 @@
 do
   IFS=$as_save_IFS
   test -z "$as_dir" && as_dir=.
-  for ac_prog in grep ggrep; do
+    for ac_prog in grep ggrep; do
     for ac_exec_ext in '' $ac_executable_extensions; do
       ac_path_GREP="$as_dir/$ac_prog$ac_exec_ext"
-      { test -f "$ac_path_GREP" && $as_test_x "$ac_path_GREP"; } || continue
+      as_fn_executable_p "$ac_path_GREP" || continue
 # Check for GNU ac_path_GREP and select it if it is found.
   # Check for GNU $ac_path_GREP
 case `"$ac_path_GREP" --version 2>&1` in
@@ -2968,7 +2978,7 @@
     $as_echo 'GREP' >> "conftest.nl"
     "$ac_path_GREP" -e 'GREP$' -e '-(cannot match)-' < "conftest.nl" >"conftest.out" 2>/dev/null || break
     diff "conftest.out" "conftest.nl" >/dev/null 2>&1 || break
-    ac_count=`expr $ac_count + 1`
+    as_fn_arith $ac_count + 1 && ac_count=$as_val
     if test $ac_count -gt ${ac_path_GREP_max-0}; then
       # Best one so far, save it but keep looking for a better one
       ac_cv_path_GREP="$ac_path_GREP"
@@ -2983,26 +2993,24 @@
       $ac_path_GREP_found && break 3
     done
   done
-done
+  done
 IFS=$as_save_IFS
   if test -z "$ac_cv_path_GREP"; then
-    { { $as_echo "$as_me:$LINENO: error: no acceptable grep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" >&5
-$as_echo "$as_me: error: no acceptable grep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" >&2;}
-   { (exit 1); exit 1; }; }
+    as_fn_error $? "no acceptable grep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" "$LINENO" 5
   fi
 else
   ac_cv_path_GREP=$GREP
 fi
 
 fi
-{ $as_echo "$as_me:$LINENO: result: $ac_cv_path_GREP" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_path_GREP" >&5
 $as_echo "$ac_cv_path_GREP" >&6; }
  GREP="$ac_cv_path_GREP"
 
 
-{ $as_echo "$as_me:$LINENO: checking for egrep" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for egrep" >&5
 $as_echo_n "checking for egrep... " >&6; }
-if test "${ac_cv_path_EGREP+set}" = set; then
+if ${ac_cv_path_EGREP+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if echo a | $GREP -E '(a|b)' >/dev/null 2>&1
@@ -3016,10 +3024,10 @@
 do
   IFS=$as_save_IFS
   test -z "$as_dir" && as_dir=.
-  for ac_prog in egrep; do
+    for ac_prog in egrep; do
     for ac_exec_ext in '' $ac_executable_extensions; do
       ac_path_EGREP="$as_dir/$ac_prog$ac_exec_ext"
-      { test -f "$ac_path_EGREP" && $as_test_x "$ac_path_EGREP"; } || continue
+      as_fn_executable_p "$ac_path_EGREP" || continue
 # Check for GNU ac_path_EGREP and select it if it is found.
   # Check for GNU $ac_path_EGREP
 case `"$ac_path_EGREP" --version 2>&1` in
@@ -3036,7 +3044,7 @@
     $as_echo 'EGREP' >> "conftest.nl"
     "$ac_path_EGREP" 'EGREP$' < "conftest.nl" >"conftest.out" 2>/dev/null || break
     diff "conftest.out" "conftest.nl" >/dev/null 2>&1 || break
-    ac_count=`expr $ac_count + 1`
+    as_fn_arith $ac_count + 1 && ac_count=$as_val
     if test $ac_count -gt ${ac_path_EGREP_max-0}; then
       # Best one so far, save it but keep looking for a better one
       ac_cv_path_EGREP="$ac_path_EGREP"
@@ -3051,12 +3059,10 @@
       $ac_path_EGREP_found && break 3
     done
   done
-done
+  done
 IFS=$as_save_IFS
   if test -z "$ac_cv_path_EGREP"; then
-    { { $as_echo "$as_me:$LINENO: error: no acceptable egrep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" >&5
-$as_echo "$as_me: error: no acceptable egrep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" >&2;}
-   { (exit 1); exit 1; }; }
+    as_fn_error $? "no acceptable egrep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" "$LINENO" 5
   fi
 else
   ac_cv_path_EGREP=$EGREP
@@ -3064,21 +3070,17 @@
 
    fi
 fi
-{ $as_echo "$as_me:$LINENO: result: $ac_cv_path_EGREP" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_path_EGREP" >&5
 $as_echo "$ac_cv_path_EGREP" >&6; }
  EGREP="$ac_cv_path_EGREP"
 
 
-{ $as_echo "$as_me:$LINENO: checking for ANSI C header files" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for ANSI C header files" >&5
 $as_echo_n "checking for ANSI C header files... " >&6; }
-if test "${ac_cv_header_stdc+set}" = set; then
+if ${ac_cv_header_stdc+:} false; then :
   $as_echo_n "(cached) " >&6
 else
-  cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+  cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 #include <stdlib.h>
 #include <stdarg.h>
@@ -3093,48 +3095,23 @@
   return 0;
 }
 _ACEOF
-rm -f conftest.$ac_objext
-if { (ac_try="$ac_compile"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_compile") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } && {
-	 test -z "$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       } && test -s conftest.$ac_objext; then
+if ac_fn_c_try_compile "$LINENO"; then :
   ac_cv_header_stdc=yes
 else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-	ac_cv_header_stdc=no
+  ac_cv_header_stdc=no
 fi
-
 rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
 
 if test $ac_cv_header_stdc = yes; then
   # SunOS 4.x string.h does not declare mem*, contrary to ANSI.
-  cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+  cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 #include <string.h>
 
 _ACEOF
 if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
-  $EGREP "memchr" >/dev/null 2>&1; then
-  :
+  $EGREP "memchr" >/dev/null 2>&1; then :
+
 else
   ac_cv_header_stdc=no
 fi
@@ -3144,18 +3121,14 @@
 
 if test $ac_cv_header_stdc = yes; then
   # ISC 2.0.2 stdlib.h does not declare free, contrary to ANSI.
-  cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+  cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 #include <stdlib.h>
 
 _ACEOF
 if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
-  $EGREP "free" >/dev/null 2>&1; then
-  :
+  $EGREP "free" >/dev/null 2>&1; then :
+
 else
   ac_cv_header_stdc=no
 fi
@@ -3165,14 +3138,10 @@
 
 if test $ac_cv_header_stdc = yes; then
   # /bin/cc in Irix-4.0.5 gets non-ANSI ctype macros unless using -ansi.
-  if test "$cross_compiling" = yes; then
+  if test "$cross_compiling" = yes; then :
   :
 else
-  cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+  cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 #include <ctype.h>
 #include <stdlib.h>
@@ -3199,118 +3168,33 @@
   return 0;
 }
 _ACEOF
-rm -f conftest$ac_exeext
-if { (ac_try="$ac_link"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_link") 2>&5
-  ac_status=$?
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } && { ac_try='./conftest$ac_exeext'
-  { (case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_try") 2>&5
-  ac_status=$?
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); }; }; then
-  :
-else
-  $as_echo "$as_me: program exited with status $ac_status" >&5
-$as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
+if ac_fn_c_try_run "$LINENO"; then :
 
-( exit $ac_status )
-ac_cv_header_stdc=no
+else
+  ac_cv_header_stdc=no
 fi
-rm -rf conftest.dSYM
-rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext conftest.$ac_objext conftest.$ac_ext
+rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
+  conftest.$ac_objext conftest.beam conftest.$ac_ext
 fi
 
-
 fi
 fi
-{ $as_echo "$as_me:$LINENO: result: $ac_cv_header_stdc" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_header_stdc" >&5
 $as_echo "$ac_cv_header_stdc" >&6; }
 if test $ac_cv_header_stdc = yes; then
 
-cat >>confdefs.h <<\_ACEOF
-#define STDC_HEADERS 1
-_ACEOF
+$as_echo "#define STDC_HEADERS 1" >>confdefs.h
 
 fi
 
 # On IRIX 5.3, sys/types and inttypes.h are conflicting.
-
-
-
-
-
-
-
-
-
 for ac_header in sys/types.h sys/stat.h stdlib.h string.h memory.h strings.h \
 		  inttypes.h stdint.h unistd.h
-do
-as_ac_Header=`$as_echo "ac_cv_header_$ac_header" | $as_tr_sh`
-{ $as_echo "$as_me:$LINENO: checking for $ac_header" >&5
-$as_echo_n "checking for $ac_header... " >&6; }
-if { as_var=$as_ac_Header; eval "test \"\${$as_var+set}\" = set"; }; then
-  $as_echo_n "(cached) " >&6
-else
-  cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h.  */
-$ac_includes_default
-
-#include <$ac_header>
-_ACEOF
-rm -f conftest.$ac_objext
-if { (ac_try="$ac_compile"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_compile") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } && {
-	 test -z "$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       } && test -s conftest.$ac_objext; then
-  eval "$as_ac_Header=yes"
-else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-	eval "$as_ac_Header=no"
-fi
-
-rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-ac_res=`eval 'as_val=${'$as_ac_Header'}
-		 $as_echo "$as_val"'`
-	       { $as_echo "$as_me:$LINENO: result: $ac_res" >&5
-$as_echo "$ac_res" >&6; }
-as_val=`eval 'as_val=${'$as_ac_Header'}
-		 $as_echo "$as_val"'`
-   if test "x$as_val" = x""yes; then
+do :
+  as_ac_Header=`$as_echo "ac_cv_header_$ac_header" | $as_tr_sh`
+ac_fn_c_check_header_compile "$LINENO" "$ac_header" "$as_ac_Header" "$ac_includes_default
+"
+if eval test \"x\$"$as_ac_Header"\" = x"yes"; then :
   cat >>confdefs.h <<_ACEOF
 #define `$as_echo "HAVE_$ac_header" | $as_tr_cpp` 1
 _ACEOF
@@ -3322,18 +3206,14 @@
 
 
   have_zlib=no
-  { $as_echo "$as_me:$LINENO: checking for main in -lz" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lz" >&5
 $as_echo_n "checking for main in -lz... " >&6; }
-if test "${ac_cv_lib_z_main+set}" = set; then
+if ${ac_cv_lib_z_main+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
 LIBS="-lz  $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 
 
@@ -3345,184 +3225,29 @@
   return 0;
 }
 _ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (ac_try="$ac_link"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_link") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } && {
-	 test -z "$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       } && test -s conftest$ac_exeext && {
-	 test "$cross_compiling" = yes ||
-	 $as_test_x conftest$ac_exeext
-       }; then
+if ac_fn_c_try_link "$LINENO"; then :
   ac_cv_lib_z_main=yes
 else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-	ac_cv_lib_z_main=no
+  ac_cv_lib_z_main=no
 fi
-
-rm -rf conftest.dSYM
-rm -f core conftest.err conftest.$ac_objext conftest_ipa8_conftest.oo \
-      conftest$ac_exeext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext \
+    conftest$ac_exeext conftest.$ac_ext
 LIBS=$ac_check_lib_save_LIBS
 fi
-{ $as_echo "$as_me:$LINENO: result: $ac_cv_lib_z_main" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_z_main" >&5
 $as_echo "$ac_cv_lib_z_main" >&6; }
-if test "x$ac_cv_lib_z_main" = x""yes; then
-
-    if test "${ac_cv_header_zlib_h+set}" = set; then
-  { $as_echo "$as_me:$LINENO: checking for zlib.h" >&5
-$as_echo_n "checking for zlib.h... " >&6; }
-if test "${ac_cv_header_zlib_h+set}" = set; then
-  $as_echo_n "(cached) " >&6
-fi
-{ $as_echo "$as_me:$LINENO: result: $ac_cv_header_zlib_h" >&5
-$as_echo "$ac_cv_header_zlib_h" >&6; }
-else
-  # Is the header compilable?
-{ $as_echo "$as_me:$LINENO: checking zlib.h usability" >&5
-$as_echo_n "checking zlib.h usability... " >&6; }
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h.  */
-$ac_includes_default
-#include <zlib.h>
-_ACEOF
-rm -f conftest.$ac_objext
-if { (ac_try="$ac_compile"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_compile") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } && {
-	 test -z "$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       } && test -s conftest.$ac_objext; then
-  ac_header_compiler=yes
-else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-	ac_header_compiler=no
-fi
-
-rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
-{ $as_echo "$as_me:$LINENO: result: $ac_header_compiler" >&5
-$as_echo "$ac_header_compiler" >&6; }
-
-# Is the header present?
-{ $as_echo "$as_me:$LINENO: checking zlib.h presence" >&5
-$as_echo_n "checking zlib.h presence... " >&6; }
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h.  */
-#include <zlib.h>
-_ACEOF
-if { (ac_try="$ac_cpp conftest.$ac_ext"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_cpp conftest.$ac_ext") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } >/dev/null && {
-	 test -z "$ac_c_preproc_warn_flag$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       }; then
-  ac_header_preproc=yes
-else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-  ac_header_preproc=no
-fi
-
-rm -f conftest.err conftest.$ac_ext
-{ $as_echo "$as_me:$LINENO: result: $ac_header_preproc" >&5
-$as_echo "$ac_header_preproc" >&6; }
-
-# So?  What about this header?
-case $ac_header_compiler:$ac_header_preproc:$ac_c_preproc_warn_flag in
-  yes:no: )
-    { $as_echo "$as_me:$LINENO: WARNING: zlib.h: accepted by the compiler, rejected by the preprocessor!" >&5
-$as_echo "$as_me: WARNING: zlib.h: accepted by the compiler, rejected by the preprocessor!" >&2;}
-    { $as_echo "$as_me:$LINENO: WARNING: zlib.h: proceeding with the compiler's result" >&5
-$as_echo "$as_me: WARNING: zlib.h: proceeding with the compiler's result" >&2;}
-    ac_header_preproc=yes
-    ;;
-  no:yes:* )
-    { $as_echo "$as_me:$LINENO: WARNING: zlib.h: present but cannot be compiled" >&5
-$as_echo "$as_me: WARNING: zlib.h: present but cannot be compiled" >&2;}
-    { $as_echo "$as_me:$LINENO: WARNING: zlib.h:     check for missing prerequisite headers?" >&5
-$as_echo "$as_me: WARNING: zlib.h:     check for missing prerequisite headers?" >&2;}
-    { $as_echo "$as_me:$LINENO: WARNING: zlib.h: see the Autoconf documentation" >&5
-$as_echo "$as_me: WARNING: zlib.h: see the Autoconf documentation" >&2;}
-    { $as_echo "$as_me:$LINENO: WARNING: zlib.h:     section \"Present But Cannot Be Compiled\"" >&5
-$as_echo "$as_me: WARNING: zlib.h:     section \"Present But Cannot Be Compiled\"" >&2;}
-    { $as_echo "$as_me:$LINENO: WARNING: zlib.h: proceeding with the preprocessor's result" >&5
-$as_echo "$as_me: WARNING: zlib.h: proceeding with the preprocessor's result" >&2;}
-    { $as_echo "$as_me:$LINENO: WARNING: zlib.h: in the future, the compiler will take precedence" >&5
-$as_echo "$as_me: WARNING: zlib.h: in the future, the compiler will take precedence" >&2;}
-
-    ;;
-esac
-{ $as_echo "$as_me:$LINENO: checking for zlib.h" >&5
-$as_echo_n "checking for zlib.h... " >&6; }
-if test "${ac_cv_header_zlib_h+set}" = set; then
-  $as_echo_n "(cached) " >&6
-else
-  ac_cv_header_zlib_h=$ac_header_preproc
-fi
-{ $as_echo "$as_me:$LINENO: result: $ac_cv_header_zlib_h" >&5
-$as_echo "$ac_cv_header_zlib_h" >&6; }
+if test "x$ac_cv_lib_z_main" = xyes; then :
 
-fi
-if test "x$ac_cv_header_zlib_h" = x""yes; then
+    ac_fn_c_check_header_mongrel "$LINENO" "zlib.h" "ac_cv_header_zlib_h" "$ac_includes_default"
+if test "x$ac_cv_header_zlib_h" = xyes; then :
 
-      { $as_echo "$as_me:$LINENO: checking if zlib version >= 1.1.3" >&5
+      { $as_echo "$as_me:${as_lineno-$LINENO}: checking if zlib version >= 1.1.3" >&5
 $as_echo_n "checking if zlib version >= 1.1.3... " >&6; }
-      if test "$cross_compiling" = yes; then
-  { $as_echo "$as_me:$LINENO: result: no" >&5
+      if test "$cross_compiling" = yes; then :
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
 $as_echo "no" >&6; }
 else
-  cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+  cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 
 #include "confdefs.h"
@@ -3536,46 +3261,19 @@
 #endif
 }
 _ACEOF
-rm -f conftest$ac_exeext
-if { (ac_try="$ac_link"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_link") 2>&5
-  ac_status=$?
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } && { ac_try='./conftest$ac_exeext'
-  { (case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_try") 2>&5
-  ac_status=$?
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); }; }; then
-  { $as_echo "$as_me:$LINENO: result: yes" >&5
+if ac_fn_c_try_run "$LINENO"; then :
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
 $as_echo "yes" >&6; }
           have_zlib=yes
 else
-  $as_echo "$as_me: program exited with status $ac_status" >&5
-$as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-( exit $ac_status )
-{ $as_echo "$as_me:$LINENO: result: no" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
 $as_echo "no" >&6; }
 fi
-rm -rf conftest.dSYM
-rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext conftest.$ac_objext conftest.$ac_ext
+rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
+  conftest.$ac_objext conftest.beam conftest.$ac_ext
 fi
 
 
-
 fi
 
 
@@ -3583,28 +3281,28 @@
 fi
 
   if test "${have_zlib}" = yes; then
-    cat >>confdefs.h <<\_ACEOF
-#define HAVE_ZLIB 1
-_ACEOF
+    $as_echo "#define HAVE_ZLIB 1" >>confdefs.h
 
     LIBS='-lz '$LIBS
   fi
 
 
+ac_ext=c
+ac_cpp='$CPP $CPPFLAGS'
+ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
+ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
+ac_compiler_gnu=$ac_cv_c_compiler_gnu
+
 
 
-{ $as_echo "$as_me:$LINENO: checking for pthread_create in -lpthread" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for pthread_create in -lpthread" >&5
 $as_echo_n "checking for pthread_create in -lpthread... " >&6; }
-if test "${ac_cv_lib_pthread_pthread_create+set}" = set; then
+if ${ac_cv_lib_pthread_pthread_create+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
 LIBS="-lpthread  $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 
 /* Override any GCC internal prototype to avoid an error.
@@ -3616,49 +3314,24 @@
 char pthread_create ();
 int
 main ()
-{
-return pthread_create ();
-  ;
-  return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (ac_try="$ac_link"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_link") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } && {
-	 test -z "$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       } && test -s conftest$ac_exeext && {
-	 test "$cross_compiling" = yes ||
-	 $as_test_x conftest$ac_exeext
-       }; then
+{
+return pthread_create ();
+  ;
+  return 0;
+}
+_ACEOF
+if ac_fn_c_try_link "$LINENO"; then :
   ac_cv_lib_pthread_pthread_create=yes
 else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-	ac_cv_lib_pthread_pthread_create=no
+  ac_cv_lib_pthread_pthread_create=no
 fi
-
-rm -rf conftest.dSYM
-rm -f core conftest.err conftest.$ac_objext conftest_ipa8_conftest.oo \
-      conftest$ac_exeext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext \
+    conftest$ac_exeext conftest.$ac_ext
 LIBS=$ac_check_lib_save_LIBS
 fi
-{ $as_echo "$as_me:$LINENO: result: $ac_cv_lib_pthread_pthread_create" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_pthread_pthread_create" >&5
 $as_echo "$ac_cv_lib_pthread_pthread_create" >&6; }
-if test "x$ac_cv_lib_pthread_pthread_create" = x""yes; then
+if test "x$ac_cv_lib_pthread_pthread_create" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBPTHREAD 1
 _ACEOF
@@ -3668,11 +3341,7 @@
 fi
 
 
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h.  */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
 
 /* Override any GCC internal prototype to avoid an error.
@@ -3690,47 +3359,23 @@
   return 0;
 }
 _ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (ac_try="$ac_link"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_link") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } && {
-	 test -z "$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       } && test -s conftest$ac_exeext && {
-	 test "$cross_compiling" = yes ||
-	 $as_test_x conftest$ac_exeext
-       }; then
+if ac_fn_c_try_link "$LINENO"; then :
   use_pthreads=yes
 else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-	use_pthreads=no
+  use_pthreads=no
 fi
+rm -f core conftest.err conftest.$ac_objext \
+    conftest$ac_exeext conftest.$ac_ext
 
-rm -rf conftest.dSYM
-rm -f core conftest.err conftest.$ac_objext conftest_ipa8_conftest.oo \
-      conftest$ac_exeext conftest.$ac_ext
-
-{ $as_echo "$as_me:$LINENO: checking if we can use pthreads" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if we can use pthreads" >&5
 $as_echo_n "checking if we can use pthreads... " >&6; }
-{ $as_echo "$as_me:$LINENO: result: $use_pthreads" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $use_pthreads" >&5
 $as_echo "$use_pthreads" >&6; }
 
-{ $as_echo "$as_me:$LINENO: checking if PTHREAD_STACK_MIN is defined" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if PTHREAD_STACK_MIN is defined" >&5
 $as_echo_n "checking if PTHREAD_STACK_MIN is defined... " >&6; }
-cat >conftest.$ac_ext <<_ACEOF
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h.  */
 
 	#include <pthread.h>
 	#include <limits.h>
@@ -3739,51 +3384,63 @@
 }
 
 _ACEOF
-rm -f conftest.$ac_objext
-if { (ac_try="$ac_compile"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:$LINENO: $ac_try_echo\""
-$as_echo "$ac_try_echo") >&5
-  (eval "$ac_compile") 2>conftest.er1
-  ac_status=$?
-  grep -v '^ *+' conftest.er1 >conftest.err
-  rm -f conftest.er1
-  cat conftest.err >&5
-  $as_echo "$as_me:$LINENO: \$? = $ac_status" >&5
-  (exit $ac_status); } && {
-	 test -z "$ac_c_werror_flag" ||
-	 test ! -s conftest.err
-       } && test -s conftest.$ac_objext; then
+if ac_fn_c_try_compile "$LINENO"; then :
   use_pthread_stack_min=yes
 else
-  $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-	use_pthread_stack_min=no
+  use_pthread_stack_min=no
 fi
-
 rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
-{ $as_echo "$as_me:$LINENO: result: $use_pthread_stack_min" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $use_pthread_stack_min" >&5
 $as_echo "$use_pthread_stack_min" >&6; }
 
-if test "x$use_pthreads" = "xyes"
-then
-if test "x$use_pthread_stack_min" = "xyes"
-    then
-	LIBS="$LIBS -lpthread"
-    	cat >>confdefs.h <<\_ACEOF
-#define USE_PTHREADS 1
-_ACEOF
+if test "x$use_pthread_stack_min" = xno; then
+	use_pthreads=no
+fi
+
+
+# Check whether --enable-threading was given.
+if test "${enable_threading+set}" = set; then :
+  enableval=$enable_threading;
+fi
+
+
+
+if test "x$enable_threading" != "xno" ; then :
+
+	    if test "x${use_pthreads}" = "xno"; then
+	       { $as_echo "$as_me:${as_lineno-$LINENO}: ------------------------------------------" >&5
+$as_echo "$as_me: ------------------------------------------" >&6;}
+	       { $as_echo "$as_me:${as_lineno-$LINENO}: Unable to find pthreads on this system.  " >&5
+$as_echo "$as_me: Unable to find pthreads on this system.  " >&6;}
+	       { $as_echo "$as_me:${as_lineno-$LINENO}: Building a single-threaded version.      " >&5
+$as_echo "$as_me: Building a single-threaded version.      " >&6;}
+	       { $as_echo "$as_me:${as_lineno-$LINENO}: ------------------------------------------" >&5
+$as_echo "$as_me: ------------------------------------------" >&6;}
+	    fi
+
+
+	    if test "x${use_pthreads}" = "xyes"; then
+  	       { $as_echo "$as_me:${as_lineno-$LINENO}: Enabling threading for affyio" >&5
+$as_echo "$as_me: Enabling threading for affyio" >&6;}
+  	       $as_echo "#define USE_PTHREADS 1" >>confdefs.h
+
+	    fi
+
+else
+
+	    { $as_echo "$as_me:${as_lineno-$LINENO}: Disabling threading for affyio" >&5
+$as_echo "$as_me: Disabling threading for affyio" >&6;}
 
-    fi
 fi
 
 
 
 
+
+
+
+
+
 ac_config_files="$ac_config_files src/Makevars"
 
 cat >confcache <<\_ACEOF
@@ -3813,13 +3470,13 @@
     case $ac_val in #(
     *${as_nl}*)
       case $ac_var in #(
-      *_cv_*) { $as_echo "$as_me:$LINENO: WARNING: cache variable $ac_var contains a newline" >&5
+      *_cv_*) { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: cache variable $ac_var contains a newline" >&5
 $as_echo "$as_me: WARNING: cache variable $ac_var contains a newline" >&2;} ;;
       esac
       case $ac_var in #(
       _ | IFS | as_nl) ;; #(
       BASH_ARGV | BASH_SOURCE) eval $ac_var= ;; #(
-      *) $as_unset $ac_var ;;
+      *) { eval $ac_var=; unset $ac_var;} ;;
       esac ;;
     esac
   done
@@ -3827,8 +3484,8 @@
   (set) 2>&1 |
     case $as_nl`(ac_space=' '; set) 2>&1` in #(
     *${as_nl}ac_space=\ *)
-      # `set' does not quote correctly, so add quotes (double-quote
-      # substitution turns \\\\ into \\, and sed turns \\ into \).
+      # `set' does not quote correctly, so add quotes: double-quote
+      # substitution turns \\\\ into \\, and sed turns \\ into \.
       sed -n \
 	"s/'/'\\\\''/g;
 	  s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1='\\2'/p"
@@ -3850,12 +3507,23 @@
      :end' >>confcache
 if diff "$cache_file" confcache >/dev/null 2>&1; then :; else
   if test -w "$cache_file"; then
-    test "x$cache_file" != "x/dev/null" &&
-      { $as_echo "$as_me:$LINENO: updating cache $cache_file" >&5
+    if test "x$cache_file" != "x/dev/null"; then
+      { $as_echo "$as_me:${as_lineno-$LINENO}: updating cache $cache_file" >&5
 $as_echo "$as_me: updating cache $cache_file" >&6;}
-    cat confcache >$cache_file
+      if test ! -f "$cache_file" || test -h "$cache_file"; then
+	cat confcache >"$cache_file"
+      else
+        case $cache_file in #(
+        */* | ?:*)
+	  mv -f confcache "$cache_file"$$ &&
+	  mv -f "$cache_file"$$ "$cache_file" ;; #(
+        *)
+	  mv -f confcache "$cache_file" ;;
+	esac
+      fi
+    fi
   else
-    { $as_echo "$as_me:$LINENO: not updating unwritable cache $cache_file" >&5
+    { $as_echo "$as_me:${as_lineno-$LINENO}: not updating unwritable cache $cache_file" >&5
 $as_echo "$as_me: not updating unwritable cache $cache_file" >&6;}
   fi
 fi
@@ -3905,14 +3573,15 @@
 
 ac_libobjs=
 ac_ltlibobjs=
+U=
 for ac_i in : $LIBOBJS; do test "x$ac_i" = x: && continue
   # 1. Remove the extension, and $U if already installed.
   ac_script='s/\$U\././;s/\.o$//;s/\.obj$//'
   ac_i=`$as_echo "$ac_i" | sed "$ac_script"`
   # 2. Prepend LIBOBJDIR.  When used with automake>=1.10 LIBOBJDIR
   #    will be set to the directory where LIBOBJS objects are built.
-  ac_libobjs="$ac_libobjs \${LIBOBJDIR}$ac_i\$U.$ac_objext"
-  ac_ltlibobjs="$ac_ltlibobjs \${LIBOBJDIR}$ac_i"'$U.lo'
+  as_fn_append ac_libobjs " \${LIBOBJDIR}$ac_i\$U.$ac_objext"
+  as_fn_append ac_ltlibobjs " \${LIBOBJDIR}$ac_i"'$U.lo'
 done
 LIBOBJS=$ac_libobjs
 
@@ -3920,13 +3589,14 @@
 
 
 
-: ${CONFIG_STATUS=./config.status}
+: "${CONFIG_STATUS=./config.status}"
 ac_write_fail=0
 ac_clean_files_save=$ac_clean_files
 ac_clean_files="$ac_clean_files $CONFIG_STATUS"
-{ $as_echo "$as_me:$LINENO: creating $CONFIG_STATUS" >&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: creating $CONFIG_STATUS" >&5
 $as_echo "$as_me: creating $CONFIG_STATUS" >&6;}
-cat >$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+as_write_fail=0
+cat >$CONFIG_STATUS <<_ASEOF || as_write_fail=1
 #! $SHELL
 # Generated by $as_me.
 # Run this file to recreate the current configuration.
@@ -3936,17 +3606,18 @@
 debug=false
 ac_cs_recheck=false
 ac_cs_silent=false
-SHELL=\${CONFIG_SHELL-$SHELL}
-_ACEOF
 
-cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
-## --------------------- ##
-## M4sh Initialization.  ##
-## --------------------- ##
+SHELL=\${CONFIG_SHELL-$SHELL}
+export SHELL
+_ASEOF
+cat >>$CONFIG_STATUS <<\_ASEOF || as_write_fail=1
+## -------------------- ##
+## M4sh Initialization. ##
+## -------------------- ##
 
 # Be more Bourne compatible
 DUALCASE=1; export DUALCASE # for MKS sh
-if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
+if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then :
   emulate sh
   NULLCMD=:
   # Pre-4.2 versions of Zsh do word splitting on ${1+"$@"}, which
@@ -3954,23 +3625,15 @@
   alias -g '${1+"$@"}'='"$@"'
   setopt NO_GLOB_SUBST
 else
-  case `(set -o) 2>/dev/null` in
-  *posix*) set -o posix ;;
+  case `(set -o) 2>/dev/null` in #(
+  *posix*) :
+    set -o posix ;; #(
+  *) :
+     ;;
 esac
-
 fi
 
 
-
-
-# PATH needs CR
-# Avoid depending upon Character Ranges.
-as_cr_letters='abcdefghijklmnopqrstuvwxyz'
-as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
-as_cr_Letters=$as_cr_letters$as_cr_LETTERS
-as_cr_digits='0123456789'
-as_cr_alnum=$as_cr_Letters$as_cr_digits
-
 as_nl='
 '
 export as_nl
@@ -3978,7 +3641,13 @@
 as_echo='\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\'
 as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo
 as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo$as_echo
-if (test "X`printf %s $as_echo`" = "X$as_echo") 2>/dev/null; then
+# Prefer a ksh shell builtin over an external printf program on Solaris,
+# but without wasting forks for bash or zsh.
+if test -z "$BASH_VERSION$ZSH_VERSION" \
+    && (test "X`print -r -- $as_echo`" = "X$as_echo") 2>/dev/null; then
+  as_echo='print -r --'
+  as_echo_n='print -rn --'
+elif (test "X`printf %s $as_echo`" = "X$as_echo") 2>/dev/null; then
   as_echo='printf %s\n'
   as_echo_n='printf %s'
 else
@@ -3989,7 +3658,7 @@
     as_echo_body='eval expr "X$1" : "X\\(.*\\)"'
     as_echo_n_body='eval
       arg=$1;
-      case $arg in
+      case $arg in #(
       *"$as_nl"*)
 	expr "X$arg" : "X\\(.*\\)$as_nl";
 	arg=`expr "X$arg" : ".*$as_nl\\(.*\\)"`;;
@@ -4012,13 +3681,6 @@
   }
 fi
 
-# Support unset when possible.
-if ( (MAIL=60; unset MAIL) || exit) >/dev/null 2>&1; then
-  as_unset=unset
-else
-  as_unset=false
-fi
-
 
 # IFS
 # We need space, tab and new line, in precisely that order.  Quoting is
@@ -4028,15 +3690,16 @@
 IFS=" ""	$as_nl"
 
 # Find who we are.  Look in the path if we contain no directory separator.
-case $0 in
+as_myself=
+case $0 in #((
   *[\\/]* ) as_myself=$0 ;;
   *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
 for as_dir in $PATH
 do
   IFS=$as_save_IFS
   test -z "$as_dir" && as_dir=.
-  test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
-done
+    test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
+  done
 IFS=$as_save_IFS
 
      ;;
@@ -4048,12 +3711,16 @@
 fi
 if test ! -f "$as_myself"; then
   $as_echo "$as_myself: error: cannot find myself; rerun with an absolute file name" >&2
-  { (exit 1); exit 1; }
+  exit 1
 fi
 
-# Work around bugs in pre-3.0 UWIN ksh.
-for as_var in ENV MAIL MAILPATH
-do ($as_unset $as_var) >/dev/null 2>&1 && $as_unset $as_var
+# Unset variables that we do not need and which cause bugs (e.g. in
+# pre-3.0 UWIN ksh).  But do not cause bugs in bash 2.01; the "|| exit 1"
+# suppresses any "Segmentation fault" message there.  '((' could
+# trigger a bug in pdksh 5.2.14.
+for as_var in BASH_ENV ENV MAIL MAILPATH
+do eval test x\${$as_var+set} = xset \
+  && ( (unset $as_var) || exit 1) >/dev/null 2>&1 && unset $as_var || :
 done
 PS1='$ '
 PS2='> '
@@ -4065,7 +3732,89 @@
 LANGUAGE=C
 export LANGUAGE
 
-# Required to use basename.
+# CDPATH.
+(unset CDPATH) >/dev/null 2>&1 && unset CDPATH
+
+
+# as_fn_error STATUS ERROR [LINENO LOG_FD]
+# ----------------------------------------
+# Output "`basename $0`: error: ERROR" to stderr. If LINENO and LOG_FD are
+# provided, also output the error to LOG_FD, referencing LINENO. Then exit the
+# script with STATUS, using 1 if that was 0.
+as_fn_error ()
+{
+  as_status=$1; test $as_status -eq 0 && as_status=1
+  if test "$4"; then
+    as_lineno=${as_lineno-"$3"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+    $as_echo "$as_me:${as_lineno-$LINENO}: error: $2" >&$4
+  fi
+  $as_echo "$as_me: error: $2" >&2
+  as_fn_exit $as_status
+} # as_fn_error
+
+
+# as_fn_set_status STATUS
+# -----------------------
+# Set $? to STATUS, without forking.
+as_fn_set_status ()
+{
+  return $1
+} # as_fn_set_status
+
+# as_fn_exit STATUS
+# -----------------
+# Exit the shell with STATUS, even in a "trap 0" or "set -e" context.
+as_fn_exit ()
+{
+  set +e
+  as_fn_set_status $1
+  exit $1
+} # as_fn_exit
+
+# as_fn_unset VAR
+# ---------------
+# Portably unset VAR.
+as_fn_unset ()
+{
+  { eval $1=; unset $1;}
+}
+as_unset=as_fn_unset
+# as_fn_append VAR VALUE
+# ----------------------
+# Append the text in VALUE to the end of the definition contained in VAR. Take
+# advantage of any shell optimizations that allow amortized linear growth over
+# repeated appends, instead of the typical quadratic growth present in naive
+# implementations.
+if (eval "as_var=1; as_var+=2; test x\$as_var = x12") 2>/dev/null; then :
+  eval 'as_fn_append ()
+  {
+    eval $1+=\$2
+  }'
+else
+  as_fn_append ()
+  {
+    eval $1=\$$1\$2
+  }
+fi # as_fn_append
+
+# as_fn_arith ARG...
+# ------------------
+# Perform arithmetic evaluation on the ARGs, and store the result in the
+# global $as_val. Take advantage of shells that can avoid forks. The arguments
+# must be portable across $(()) and expr.
+if (eval "test \$(( 1 + 1 )) = 2") 2>/dev/null; then :
+  eval 'as_fn_arith ()
+  {
+    as_val=$(( $* ))
+  }'
+else
+  as_fn_arith ()
+  {
+    as_val=`expr "$@" || test $? -eq 1`
+  }
+fi # as_fn_arith
+
+
 if expr a : '\(a\)' >/dev/null 2>&1 &&
    test "X`expr 00001 : '.*\(...\)'`" = X001; then
   as_expr=expr
@@ -4079,8 +3828,12 @@
   as_basename=false
 fi
 
+if (as_dir=`dirname -- /` && test "X$as_dir" = X/) >/dev/null 2>&1; then
+  as_dirname=dirname
+else
+  as_dirname=false
+fi
 
-# Name of the executable.
 as_me=`$as_basename -- "$0" ||
 $as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
 	 X"$0" : 'X\(//\)$' \| \
@@ -4100,76 +3853,25 @@
 	  }
 	  s/.*/./; q'`
 
-# CDPATH.
-$as_unset CDPATH
-
-
-
-  as_lineno_1=$LINENO
-  as_lineno_2=$LINENO
-  test "x$as_lineno_1" != "x$as_lineno_2" &&
-  test "x`expr $as_lineno_1 + 1`" = "x$as_lineno_2" || {
-
-  # Create $as_me.lineno as a copy of $as_myself, but with $LINENO
-  # uniformly replaced by the line number.  The first 'sed' inserts a
-  # line-number line after each line using $LINENO; the second 'sed'
-  # does the real work.  The second script uses 'N' to pair each
-  # line-number line with the line containing $LINENO, and appends
-  # trailing '-' during substitution so that $LINENO is not a special
-  # case at line end.
-  # (Raja R Harinath suggested sed '=', and Paul Eggert wrote the
-  # scripts with optimization help from Paolo Bonzini.  Blame Lee
-  # E. McMahon (1931-1989) for sed's syntax.  :-)
-  sed -n '
-    p
-    /[$]LINENO/=
-  ' <$as_myself |
-    sed '
-      s/[$]LINENO.*/&-/
-      t lineno
-      b
-      :lineno
-      N
-      :loop
-      s/[$]LINENO\([^'$as_cr_alnum'_].*\n\)\(.*\)/\2\1\2/
-      t loop
-      s/-\n.*//
-    ' >$as_me.lineno &&
-  chmod +x "$as_me.lineno" ||
-    { $as_echo "$as_me: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&2
-   { (exit 1); exit 1; }; }
-
-  # Don't try to exec as it changes $[0], causing all sort of problems
-  # (the dirname of $[0] is not the place where we might find the
-  # original and so on.  Autoconf is especially sensitive to this).
-  . "./$as_me.lineno"
-  # Exit status is that of the last command.
-  exit
-}
-
-
-if (as_dir=`dirname -- /` && test "X$as_dir" = X/) >/dev/null 2>&1; then
-  as_dirname=dirname
-else
-  as_dirname=false
-fi
+# Avoid depending upon Character Ranges.
+as_cr_letters='abcdefghijklmnopqrstuvwxyz'
+as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
+as_cr_Letters=$as_cr_letters$as_cr_LETTERS
+as_cr_digits='0123456789'
+as_cr_alnum=$as_cr_Letters$as_cr_digits
 
 ECHO_C= ECHO_N= ECHO_T=
-case `echo -n x` in
+case `echo -n x` in #(((((
 -n*)
-  case `echo 'x\c'` in
+  case `echo 'xy\c'` in
   *c*) ECHO_T='	';;	# ECHO_T is single tab character.
-  *)   ECHO_C='\c';;
+  xy)  ECHO_C='\c';;
+  *)   echo `echo ksh88 bug on AIX 6.1` > /dev/null
+       ECHO_T='	';;
   esac;;
 *)
   ECHO_N='-n';;
 esac
-if expr a : '\(a\)' >/dev/null 2>&1 &&
-   test "X`expr 00001 : '.*\(...\)'`" = X001; then
-  as_expr=expr
-else
-  as_expr=false
-fi
 
 rm -f conf$$ conf$$.exe conf$$.file
 if test -d conf$$.dir; then
@@ -4184,49 +3886,85 @@
     # ... but there are two gotchas:
     # 1) On MSYS, both `ln -s file dir' and `ln file dir' fail.
     # 2) DJGPP < 2.04 has no symlinks; `ln -s' creates a wrapper executable.
-    # In both cases, we have to default to `cp -p'.
+    # In both cases, we have to default to `cp -pR'.
     ln -s conf$$.file conf$$.dir 2>/dev/null && test ! -f conf$$.exe ||
-      as_ln_s='cp -p'
+      as_ln_s='cp -pR'
   elif ln conf$$.file conf$$ 2>/dev/null; then
     as_ln_s=ln
   else
-    as_ln_s='cp -p'
+    as_ln_s='cp -pR'
   fi
 else
-  as_ln_s='cp -p'
+  as_ln_s='cp -pR'
 fi
 rm -f conf$$ conf$$.exe conf$$.dir/conf$$.file conf$$.file
 rmdir conf$$.dir 2>/dev/null
 
+
+# as_fn_mkdir_p
+# -------------
+# Create "$as_dir" as a directory, including parents if necessary.
+as_fn_mkdir_p ()
+{
+
+  case $as_dir in #(
+  -*) as_dir=./$as_dir;;
+  esac
+  test -d "$as_dir" || eval $as_mkdir_p || {
+    as_dirs=
+    while :; do
+      case $as_dir in #(
+      *\'*) as_qdir=`$as_echo "$as_dir" | sed "s/'/'\\\\\\\\''/g"`;; #'(
+      *) as_qdir=$as_dir;;
+      esac
+      as_dirs="'$as_qdir' $as_dirs"
+      as_dir=`$as_dirname -- "$as_dir" ||
+$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+	 X"$as_dir" : 'X\(//\)[^/]' \| \
+	 X"$as_dir" : 'X\(//\)$' \| \
+	 X"$as_dir" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X"$as_dir" |
+    sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
+	    s//\1/
+	    q
+	  }
+	  /^X\(\/\/\)[^/].*/{
+	    s//\1/
+	    q
+	  }
+	  /^X\(\/\/\)$/{
+	    s//\1/
+	    q
+	  }
+	  /^X\(\/\).*/{
+	    s//\1/
+	    q
+	  }
+	  s/.*/./; q'`
+      test -d "$as_dir" && break
+    done
+    test -z "$as_dirs" || eval "mkdir $as_dirs"
+  } || test -d "$as_dir" || as_fn_error $? "cannot create directory $as_dir"
+
+
+} # as_fn_mkdir_p
 if mkdir -p . 2>/dev/null; then
-  as_mkdir_p=:
+  as_mkdir_p='mkdir -p "$as_dir"'
 else
   test -d ./-p && rmdir ./-p
   as_mkdir_p=false
 fi
 
-if test -x / >/dev/null 2>&1; then
-  as_test_x='test -x'
-else
-  if ls -dL / >/dev/null 2>&1; then
-    as_ls_L_option=L
-  else
-    as_ls_L_option=
-  fi
-  as_test_x='
-    eval sh -c '\''
-      if test -d "$1"; then
-	test -d "$1/.";
-      else
-	case $1 in
-	-*)set "./$1";;
-	esac;
-	case `ls -ld'$as_ls_L_option' "$1" 2>/dev/null` in
-	???[sx]*):;;*)false;;esac;fi
-    '\'' sh
-  '
-fi
-as_executable_p=$as_test_x
+
+# as_fn_executable_p FILE
+# -----------------------
+# Test if FILE is an executable regular file.
+as_fn_executable_p ()
+{
+  test -f "$1" && test -x "$1"
+} # as_fn_executable_p
+as_test_x='test -x'
+as_executable_p=as_fn_executable_p
 
 # Sed expression to map a string onto a valid CPP name.
 as_tr_cpp="eval sed 'y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g'"
@@ -4236,13 +3974,19 @@
 
 
 exec 6>&1
+## ----------------------------------- ##
+## Main body of $CONFIG_STATUS script. ##
+## ----------------------------------- ##
+_ASEOF
+test $as_write_fail = 0 && chmod +x $CONFIG_STATUS || ac_write_fail=1
 
-# Save the log message, to keep $[0] and so on meaningful, and to
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+# Save the log message, to keep $0 and so on meaningful, and to
 # report actual input values of CONFIG_FILES etc. instead of their
 # values after options handling.
 ac_log="
 This file was extended by $as_me, which was
-generated by GNU Autoconf 2.63.  Invocation command line was
+generated by GNU Autoconf 2.69.  Invocation command line was
 
   CONFIG_FILES    = $CONFIG_FILES
   CONFIG_HEADERS  = $CONFIG_HEADERS
@@ -4269,13 +4013,15 @@
 
 cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
 ac_cs_usage="\
-\`$as_me' instantiates files from templates according to the
-current configuration.
+\`$as_me' instantiates files and other configuration actions
+from templates according to the current configuration.  Unless the files
+and actions are specified as TAGs, all are instantiated by default.
 
-Usage: $0 [OPTION]... [FILE]...
+Usage: $0 [OPTION]... [TAG]...
 
   -h, --help       print this help, then exit
   -V, --version    print version number and configuration settings, then exit
+      --config     print configuration, then exit
   -q, --quiet, --silent
                    do not print progress messages
   -d, --debug      don't remove temporary files
@@ -4286,16 +4032,17 @@
 Configuration files:
 $config_files
 
-Report bugs to <bug-autoconf@gnu.org>."
+Report bugs to the package provider."
 
 _ACEOF
 cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
 ac_cs_version="\\
 config.status
-configured by $0, generated by GNU Autoconf 2.63,
-  with options \\"`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`\\"
+configured by $0, generated by GNU Autoconf 2.69,
+  with options \\"\$ac_cs_config\\"
 
-Copyright (C) 2008 Free Software Foundation, Inc.
+Copyright (C) 2012 Free Software Foundation, Inc.
 This config.status script is free software; the Free Software Foundation
 gives unlimited permission to copy, distribute and modify it."
 
@@ -4310,11 +4057,16 @@
 while test $# != 0
 do
   case $1 in
-  --*=*)
+  --*=?*)
     ac_option=`expr "X$1" : 'X\([^=]*\)='`
     ac_optarg=`expr "X$1" : 'X[^=]*=\(.*\)'`
     ac_shift=:
     ;;
+  --*=)
+    ac_option=`expr "X$1" : 'X\([^=]*\)='`
+    ac_optarg=
+    ac_shift=:
+    ;;
   *)
     ac_option=$1
     ac_optarg=$2
@@ -4328,14 +4080,17 @@
     ac_cs_recheck=: ;;
   --version | --versio | --versi | --vers | --ver | --ve | --v | -V )
     $as_echo "$ac_cs_version"; exit ;;
+  --config | --confi | --conf | --con | --co | --c )
+    $as_echo "$ac_cs_config"; exit ;;
   --debug | --debu | --deb | --de | --d | -d )
     debug=: ;;
   --file | --fil | --fi | --f )
     $ac_shift
     case $ac_optarg in
     *\'*) ac_optarg=`$as_echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"` ;;
+    '') as_fn_error $? "missing file argument" ;;
     esac
-    CONFIG_FILES="$CONFIG_FILES '$ac_optarg'"
+    as_fn_append CONFIG_FILES " '$ac_optarg'"
     ac_need_defaults=false;;
   --he | --h |  --help | --hel | -h )
     $as_echo "$ac_cs_usage"; exit ;;
@@ -4344,11 +4099,10 @@
     ac_cs_silent=: ;;
 
   # This is an error.
-  -*) { $as_echo "$as_me: error: unrecognized option: $1
-Try \`$0 --help' for more information." >&2
-   { (exit 1); exit 1; }; } ;;
+  -*) as_fn_error $? "unrecognized option: \`$1'
+Try \`$0 --help' for more information." ;;
 
-  *) ac_config_targets="$ac_config_targets $1"
+  *) as_fn_append ac_config_targets " $1"
      ac_need_defaults=false ;;
 
   esac
@@ -4365,7 +4119,7 @@
 _ACEOF
 cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
 if \$ac_cs_recheck; then
-  set X '$SHELL' '$0' $ac_configure_args \$ac_configure_extra_args --no-create --no-recursion
+  set X $SHELL '$0' $ac_configure_args \$ac_configure_extra_args --no-create --no-recursion
   shift
   \$as_echo "running CONFIG_SHELL=$SHELL \$*" >&6
   CONFIG_SHELL='$SHELL'
@@ -4396,9 +4150,7 @@
   case $ac_config_target in
     "src/Makevars") CONFIG_FILES="$CONFIG_FILES src/Makevars" ;;
 
-  *) { { $as_echo "$as_me:$LINENO: error: invalid argument: $ac_config_target" >&5
-$as_echo "$as_me: error: invalid argument: $ac_config_target" >&2;}
-   { (exit 1); exit 1; }; };;
+  *) as_fn_error $? "invalid argument: \`$ac_config_target'" "$LINENO" 5;;
   esac
 done
 
@@ -4419,26 +4171,24 @@
 # after its creation but before its name has been assigned to `$tmp'.
 $debug ||
 {
-  tmp=
+  tmp= ac_tmp=
   trap 'exit_status=$?
-  { test -z "$tmp" || test ! -d "$tmp" || rm -fr "$tmp"; } && exit $exit_status
+  : "${ac_tmp:=$tmp}"
+  { test ! -d "$ac_tmp" || rm -fr "$ac_tmp"; } && exit $exit_status
 ' 0
-  trap '{ (exit 1); exit 1; }' 1 2 13 15
+  trap 'as_fn_exit 1' 1 2 13 15
 }
 # Create a (secure) tmp directory for tmp files.
 
 {
   tmp=`(umask 077 && mktemp -d "./confXXXXXX") 2>/dev/null` &&
-  test -n "$tmp" && test -d "$tmp"
+  test -d "$tmp"
 }  ||
 {
   tmp=./conf$$-$RANDOM
   (umask 077 && mkdir "$tmp")
-} ||
-{
-   $as_echo "$as_me: cannot create a temporary directory in ." >&2
-   { (exit 1); exit 1; }
-}
+} || as_fn_error $? "cannot create a temporary directory in ." "$LINENO" 5
+ac_tmp=$tmp
 
 # Set up the scripts for CONFIG_FILES section.
 # No need to generate them if there are no CONFIG_FILES.
@@ -4446,7 +4196,13 @@
 if test -n "$CONFIG_FILES"; then
 
 
-ac_cr='
'
+ac_cr=`echo X | tr X '\015'`
+# On cygwin, bash can eat \r inside `` if the user requested igncr.
+# But we know of no other shell where ac_cr would be empty at this
+# point, so we can use a bashism as a fallback.
+if test "x$ac_cr" = x; then
+  eval ac_cr=\$\'\\r\'
+fi
 ac_cs_awk_cr=`$AWK 'BEGIN { print "a\rb" }' </dev/null 2>/dev/null`
 if test "$ac_cs_awk_cr" = "a${ac_cr}b"; then
   ac_cs_awk_cr='\\r'
@@ -4454,7 +4210,7 @@
   ac_cs_awk_cr=$ac_cr
 fi
 
-echo 'BEGIN {' >"$tmp/subs1.awk" &&
+echo 'BEGIN {' >"$ac_tmp/subs1.awk" &&
 _ACEOF
 
 
@@ -4463,24 +4219,18 @@
   echo "$ac_subst_vars" | sed 's/.*/&!$&$ac_delim/' &&
   echo "_ACEOF"
 } >conf$$subs.sh ||
-  { { $as_echo "$as_me:$LINENO: error: could not make $CONFIG_STATUS" >&5
-$as_echo "$as_me: error: could not make $CONFIG_STATUS" >&2;}
-   { (exit 1); exit 1; }; }
-ac_delim_num=`echo "$ac_subst_vars" | grep -c '$'`
+  as_fn_error $? "could not make $CONFIG_STATUS" "$LINENO" 5
+ac_delim_num=`echo "$ac_subst_vars" | grep -c '^'`
 ac_delim='%!_!# '
 for ac_last_try in false false false false false :; do
   . ./conf$$subs.sh ||
-    { { $as_echo "$as_me:$LINENO: error: could not make $CONFIG_STATUS" >&5
-$as_echo "$as_me: error: could not make $CONFIG_STATUS" >&2;}
-   { (exit 1); exit 1; }; }
+    as_fn_error $? "could not make $CONFIG_STATUS" "$LINENO" 5
 
   ac_delim_n=`sed -n "s/.*$ac_delim\$/X/p" conf$$subs.awk | grep -c X`
   if test $ac_delim_n = $ac_delim_num; then
     break
   elif $ac_last_try; then
-    { { $as_echo "$as_me:$LINENO: error: could not make $CONFIG_STATUS" >&5
-$as_echo "$as_me: error: could not make $CONFIG_STATUS" >&2;}
-   { (exit 1); exit 1; }; }
+    as_fn_error $? "could not make $CONFIG_STATUS" "$LINENO" 5
   else
     ac_delim="$ac_delim!$ac_delim _$ac_delim!! "
   fi
@@ -4488,7 +4238,7 @@
 rm -f conf$$subs.sh
 
 cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
-cat >>"\$tmp/subs1.awk" <<\\_ACAWK &&
+cat >>"\$ac_tmp/subs1.awk" <<\\_ACAWK &&
 _ACEOF
 sed -n '
 h
@@ -4502,7 +4252,7 @@
 t delim
 :nl
 h
-s/\(.\{148\}\).*/\1/
+s/\(.\{148\}\)..*/\1/
 t more1
 s/["\\]/\\&/g; s/^/"/; s/$/\\n"\\/
 p
@@ -4516,7 +4266,7 @@
 t nl
 :delim
 h
-s/\(.\{148\}\).*/\1/
+s/\(.\{148\}\)..*/\1/
 t more2
 s/["\\]/\\&/g; s/^/"/; s/$/"/
 p
@@ -4536,7 +4286,7 @@
 rm -f conf$$subs.awk
 cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
 _ACAWK
-cat >>"\$tmp/subs1.awk" <<_ACAWK &&
+cat >>"\$ac_tmp/subs1.awk" <<_ACAWK &&
   for (key in S) S_is_set[key] = 1
   FS = ""
 
@@ -4568,23 +4318,29 @@
   sed "s/$ac_cr\$//; s/$ac_cr/$ac_cs_awk_cr/g"
 else
   cat
-fi < "$tmp/subs1.awk" > "$tmp/subs.awk" \
-  || { { $as_echo "$as_me:$LINENO: error: could not setup config files machinery" >&5
-$as_echo "$as_me: error: could not setup config files machinery" >&2;}
-   { (exit 1); exit 1; }; }
+fi < "$ac_tmp/subs1.awk" > "$ac_tmp/subs.awk" \
+  || as_fn_error $? "could not setup config files machinery" "$LINENO" 5
 _ACEOF
 
-# VPATH may cause trouble with some makes, so we remove $(srcdir),
-# ${srcdir} and @srcdir@ from VPATH if srcdir is ".", strip leading and
+# VPATH may cause trouble with some makes, so we remove sole $(srcdir),
+# ${srcdir} and @srcdir@ entries from VPATH if srcdir is ".", strip leading and
 # trailing colons and then remove the whole line if VPATH becomes empty
 # (actually we leave an empty line to preserve line numbers).
 if test "x$srcdir" = x.; then
-  ac_vpsub='/^[	 ]*VPATH[	 ]*=/{
-s/:*\$(srcdir):*/:/
-s/:*\${srcdir}:*/:/
-s/:*@srcdir@:*/:/
-s/^\([^=]*=[	 ]*\):*/\1/
+  ac_vpsub='/^[	 ]*VPATH[	 ]*=[	 ]*/{
+h
+s///
+s/^/:/
+s/[	 ]*$/:/
+s/:\$(srcdir):/:/g
+s/:\${srcdir}:/:/g
+s/:@srcdir@:/:/g
+s/^:*//
 s/:*$//
+x
+s/\(=[	 ]*\).*/\1/
+G
+s/\n//
 s/^[^=]*=[	 ]*$//
 }'
 fi
@@ -4602,9 +4358,7 @@
   esac
   case $ac_mode$ac_tag in
   :[FHL]*:*);;
-  :L* | :C*:*) { { $as_echo "$as_me:$LINENO: error: invalid tag $ac_tag" >&5
-$as_echo "$as_me: error: invalid tag $ac_tag" >&2;}
-   { (exit 1); exit 1; }; };;
+  :L* | :C*:*) as_fn_error $? "invalid tag \`$ac_tag'" "$LINENO" 5;;
   :[FH]-) ac_tag=-:-;;
   :[FH]*) ac_tag=$ac_tag:$ac_tag.in;;
   esac
@@ -4623,7 +4377,7 @@
     for ac_f
     do
       case $ac_f in
-      -) ac_f="$tmp/stdin";;
+      -) ac_f="$ac_tmp/stdin";;
       *) # Look for the file first in the build tree, then in the source tree
 	 # (if the path is not absolute).  The absolute path cannot be DOS-style,
 	 # because $ac_f cannot contain `:'.
@@ -4632,12 +4386,10 @@
 	   [\\/$]*) false;;
 	   *) test -f "$srcdir/$ac_f" && ac_f="$srcdir/$ac_f";;
 	   esac ||
-	   { { $as_echo "$as_me:$LINENO: error: cannot find input file: $ac_f" >&5
-$as_echo "$as_me: error: cannot find input file: $ac_f" >&2;}
-   { (exit 1); exit 1; }; };;
+	   as_fn_error 1 "cannot find input file: \`$ac_f'" "$LINENO" 5;;
       esac
       case $ac_f in *\'*) ac_f=`$as_echo "$ac_f" | sed "s/'/'\\\\\\\\''/g"`;; esac
-      ac_file_inputs="$ac_file_inputs '$ac_f'"
+      as_fn_append ac_file_inputs " '$ac_f'"
     done
 
     # Let's still pretend it is `configure' which instantiates (i.e., don't
@@ -4648,7 +4400,7 @@
 	`' by configure.'
     if test x"$ac_file" != x-; then
       configure_input="$ac_file.  $configure_input"
-      { $as_echo "$as_me:$LINENO: creating $ac_file" >&5
+      { $as_echo "$as_me:${as_lineno-$LINENO}: creating $ac_file" >&5
 $as_echo "$as_me: creating $ac_file" >&6;}
     fi
     # Neutralize special characters interpreted by sed in replacement strings.
@@ -4660,10 +4412,8 @@
     esac
 
     case $ac_tag in
-    *:-:* | *:-) cat >"$tmp/stdin" \
-      || { { $as_echo "$as_me:$LINENO: error: could not create $ac_file" >&5
-$as_echo "$as_me: error: could not create $ac_file" >&2;}
-   { (exit 1); exit 1; }; } ;;
+    *:-:* | *:-) cat >"$ac_tmp/stdin" \
+      || as_fn_error $? "could not create $ac_file" "$LINENO" 5 ;;
     esac
     ;;
   esac
@@ -4691,47 +4441,7 @@
 	    q
 	  }
 	  s/.*/./; q'`
-  { as_dir="$ac_dir"
-  case $as_dir in #(
-  -*) as_dir=./$as_dir;;
-  esac
-  test -d "$as_dir" || { $as_mkdir_p && mkdir -p "$as_dir"; } || {
-    as_dirs=
-    while :; do
-      case $as_dir in #(
-      *\'*) as_qdir=`$as_echo "$as_dir" | sed "s/'/'\\\\\\\\''/g"`;; #'(
-      *) as_qdir=$as_dir;;
-      esac
-      as_dirs="'$as_qdir' $as_dirs"
-      as_dir=`$as_dirname -- "$as_dir" ||
-$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
-	 X"$as_dir" : 'X\(//\)[^/]' \| \
-	 X"$as_dir" : 'X\(//\)$' \| \
-	 X"$as_dir" : 'X\(/\)' \| . 2>/dev/null ||
-$as_echo X"$as_dir" |
-    sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
-	    s//\1/
-	    q
-	  }
-	  /^X\(\/\/\)[^/].*/{
-	    s//\1/
-	    q
-	  }
-	  /^X\(\/\/\)$/{
-	    s//\1/
-	    q
-	  }
-	  /^X\(\/\).*/{
-	    s//\1/
-	    q
-	  }
-	  s/.*/./; q'`
-      test -d "$as_dir" && break
-    done
-    test -z "$as_dirs" || eval "mkdir $as_dirs"
-  } || test -d "$as_dir" || { { $as_echo "$as_me:$LINENO: error: cannot create directory $as_dir" >&5
-$as_echo "$as_me: error: cannot create directory $as_dir" >&2;}
-   { (exit 1); exit 1; }; }; }
+  as_dir="$ac_dir"; as_fn_mkdir_p
   ac_builddir=.
 
 case "$ac_dir" in
@@ -4779,7 +4489,6 @@
 # If the template does not know about datarootdir, expand it.
 # FIXME: This hack should be removed a few years after 2.60.
 ac_datarootdir_hack=; ac_datarootdir_seen=
-
 ac_sed_dataroot='
 /datarootdir/ {
   p
@@ -4789,12 +4498,11 @@
 /@docdir@/p
 /@infodir@/p
 /@localedir@/p
-/@mandir@/p
-'
+/@mandir@/p'
 case `eval "sed -n \"\$ac_sed_dataroot\" $ac_file_inputs"` in
 *datarootdir*) ac_datarootdir_seen=yes;;
 *@datadir@*|*@docdir@*|*@infodir@*|*@localedir@*|*@mandir@*)
-  { $as_echo "$as_me:$LINENO: WARNING: $ac_file_inputs seems to ignore the --datarootdir setting" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $ac_file_inputs seems to ignore the --datarootdir setting" >&5
 $as_echo "$as_me: WARNING: $ac_file_inputs seems to ignore the --datarootdir setting" >&2;}
 _ACEOF
 cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
@@ -4804,7 +4512,7 @@
   s&@infodir@&$infodir&g
   s&@localedir@&$localedir&g
   s&@mandir@&$mandir&g
-    s&\\\${datarootdir}&$datarootdir&g' ;;
+  s&\\\${datarootdir}&$datarootdir&g' ;;
 esac
 _ACEOF
 
@@ -4830,27 +4538,24 @@
 s&@abs_top_builddir@&$ac_abs_top_builddir&;t t
 $ac_datarootdir_hack
 "
-eval sed \"\$ac_sed_extra\" "$ac_file_inputs" | $AWK -f "$tmp/subs.awk" >$tmp/out \
-  || { { $as_echo "$as_me:$LINENO: error: could not create $ac_file" >&5
-$as_echo "$as_me: error: could not create $ac_file" >&2;}
-   { (exit 1); exit 1; }; }
+eval sed \"\$ac_sed_extra\" "$ac_file_inputs" | $AWK -f "$ac_tmp/subs.awk" \
+  >$ac_tmp/out || as_fn_error $? "could not create $ac_file" "$LINENO" 5
 
 test -z "$ac_datarootdir_hack$ac_datarootdir_seen" &&
-  { ac_out=`sed -n '/\${datarootdir}/p' "$tmp/out"`; test -n "$ac_out"; } &&
-  { ac_out=`sed -n '/^[	 ]*datarootdir[	 ]*:*=/p' "$tmp/out"`; test -z "$ac_out"; } &&
-  { $as_echo "$as_me:$LINENO: WARNING: $ac_file contains a reference to the variable \`datarootdir'
-which seems to be undefined.  Please make sure it is defined." >&5
+  { ac_out=`sed -n '/\${datarootdir}/p' "$ac_tmp/out"`; test -n "$ac_out"; } &&
+  { ac_out=`sed -n '/^[	 ]*datarootdir[	 ]*:*=/p' \
+      "$ac_tmp/out"`; test -z "$ac_out"; } &&
+  { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $ac_file contains a reference to the variable \`datarootdir'
+which seems to be undefined.  Please make sure it is defined" >&5
 $as_echo "$as_me: WARNING: $ac_file contains a reference to the variable \`datarootdir'
-which seems to be undefined.  Please make sure it is defined." >&2;}
+which seems to be undefined.  Please make sure it is defined" >&2;}
 
-  rm -f "$tmp/stdin"
+  rm -f "$ac_tmp/stdin"
   case $ac_file in
-  -) cat "$tmp/out" && rm -f "$tmp/out";;
-  *) rm -f "$ac_file" && mv "$tmp/out" "$ac_file";;
+  -) cat "$ac_tmp/out" && rm -f "$ac_tmp/out";;
+  *) rm -f "$ac_file" && mv "$ac_tmp/out" "$ac_file";;
   esac \
-  || { { $as_echo "$as_me:$LINENO: error: could not create $ac_file" >&5
-$as_echo "$as_me: error: could not create $ac_file" >&2;}
-   { (exit 1); exit 1; }; }
+  || as_fn_error $? "could not create $ac_file" "$LINENO" 5
  ;;
 
 
@@ -4860,15 +4565,12 @@
 done # for ac_tag
 
 
-{ (exit 0); exit 0; }
+as_fn_exit 0
 _ACEOF
-chmod +x $CONFIG_STATUS
 ac_clean_files=$ac_clean_files_save
 
 test $ac_write_fail = 0 ||
-  { { $as_echo "$as_me:$LINENO: error: write failure creating $CONFIG_STATUS" >&5
-$as_echo "$as_me: error: write failure creating $CONFIG_STATUS" >&2;}
-   { (exit 1); exit 1; }; }
+  as_fn_error $? "write failure creating $CONFIG_STATUS" "$LINENO" 5
 
 
 # configure is writing to config.log, and then calls config.status.
@@ -4889,10 +4591,10 @@
   exec 5>>config.log
   # Use ||, not &&, to avoid exiting from the if with $? = 1, which
   # would make configure fail if this is the last instruction.
-  $ac_cs_success || { (exit 1); exit 1; }
+  $ac_cs_success || as_fn_exit 1
 fi
 if test -n "$ac_unrecognized_opts" && test "$enable_option_checking" != no; then
-  { $as_echo "$as_me:$LINENO: WARNING: unrecognized options: $ac_unrecognized_opts" >&5
+  { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: unrecognized options: $ac_unrecognized_opts" >&5
 $as_echo "$as_me: WARNING: unrecognized options: $ac_unrecognized_opts" >&2;}
 fi
 
diff -Nru r-bioc-affyio-1.44.0/configure.in r-bioc-affyio-1.48.0/configure.in
--- r-bioc-affyio-1.44.0/configure.in	2016-10-17 20:23:26.000000000 +0000
+++ r-bioc-affyio-1.48.0/configure.in	2017-10-30 21:17:15.000000000 +0000
@@ -1,12 +1,6 @@
 dnl
-dnl Configuration things for affyR.
-dnl (http://www.cbs.dtu.dk/laurent/download/affyR/
-dnl What is below (and in the other configuration fiels 
-dnl was taken from different configuration scripts for R version 1.3.0.
+dnl Configuration things for affyio
 dnl
-dnl Acknowledgments: The author(s) of the R configure scripts, Kurt Hornik for the tip with autoconf.
-dnl
-dnl Laurent 2001
 
 
 AC_INIT("DESCRIPTION")
@@ -18,6 +12,8 @@
 
 R_ZLIB
 
+AC_LANG(C)
+
 
 AC_CHECK_LIB(pthread, pthread_create)
 
@@ -27,25 +23,48 @@
 AC_MSG_RESULT($use_pthreads)
 
 AC_MSG_CHECKING([if PTHREAD_STACK_MIN is defined])
-AC_COMPILE_IFELSE([
+AC_COMPILE_IFELSE([AC_LANG_SOURCE([
 	#include <pthread.h>
 	#include <limits.h>
 
       int main () {size_t stacksize = PTHREAD_STACK_MIN + 0x4000;
 }     	  
-    ],[use_pthread_stack_min=yes], [use_pthread_stack_min=no])
+    ])],[use_pthread_stack_min=yes], [use_pthread_stack_min=no])
 AC_MSG_RESULT($use_pthread_stack_min)
 
-if test "x$use_pthreads" = "xyes"
-then
-if test "x$use_pthread_stack_min" = "xyes"
-    then
-	LIBS="$LIBS -lpthread"
-    	AC_DEFINE(USE_PTHREADS, 1)
-    fi
+if test "x$use_pthread_stack_min" = xno; then
+	use_pthreads=no
 fi
 
 
+AC_ARG_ENABLE([threading],
+	AS_HELP_STRING([--disable-threading],[Disable threading]))
+
+
+AS_IF([test "x$enable_threading" != "xno" ],[
+	    if test "x${use_pthreads}" = "xno"; then
+	       AC_MSG_NOTICE(------------------------------------------)
+	       AC_MSG_NOTICE( Unable to find pthreads on this system.  )
+	       AC_MSG_NOTICE( Building a single-threaded version.      )
+	       AC_MSG_NOTICE(------------------------------------------)
+	    fi
+
+
+	    if test "x${use_pthreads}" = "xyes"; then
+  	       AC_MSG_NOTICE(Enabling threading for affyio)
+  	       AC_DEFINE(USE_PTHREADS, 1)
+	    fi
+	    ],
+	    [
+	    AC_MSG_NOTICE(Disabling threading for affyio)
+	    ])
+
+
+
+
+
+
+
 
 
 AC_OUTPUT(src/Makevars)
diff -Nru r-bioc-affyio-1.44.0/debian/changelog r-bioc-affyio-1.48.0/debian/changelog
--- r-bioc-affyio-1.44.0/debian/changelog	2017-09-27 08:48:39.000000000 +0000
+++ r-bioc-affyio-1.48.0/debian/changelog	2017-11-08 10:19:32.000000000 +0000
@@ -1,8 +1,19 @@
-r-bioc-affyio (1.44.0-1build1) artful; urgency=medium
+r-bioc-affyio (1.48.0-1) unstable; urgency=medium
 
-  * No-change rebuild to pick up r-api-3.4
+  * New upstream version
+  * Moved packaging from SVN to Git
+  * Standards-Version: 4.1.1
+  * Testsuite: autopkgtest-pkg-r
 
- -- Graham Inggs <ginggs@ubuntu.com>  Wed, 27 Sep 2017 08:48:39 +0000
+ -- Andreas Tille <tille@debian.org>  Wed, 08 Nov 2017 11:19:32 +0100
+
+r-bioc-affyio (1.46.0-1) unstable; urgency=medium
+
+  * New upstream version
+  * debhelper 10
+  * Standards-Version: 4.1.0 (no changes needed)
+
+ -- Andreas Tille <tille@debian.org>  Thu, 24 Aug 2017 22:57:38 +0200
 
 r-bioc-affyio (1.44.0-1) unstable; urgency=medium
 
diff -Nru r-bioc-affyio-1.44.0/debian/compat r-bioc-affyio-1.48.0/debian/compat
--- r-bioc-affyio-1.44.0/debian/compat	2013-09-12 08:59:23.000000000 +0000
+++ r-bioc-affyio-1.48.0/debian/compat	2017-11-08 10:19:32.000000000 +0000
@@ -1 +1 @@
-9
+10
diff -Nru r-bioc-affyio-1.44.0/debian/control r-bioc-affyio-1.48.0/debian/control
--- r-bioc-affyio-1.44.0/debian/control	2016-10-26 12:16:05.000000000 +0000
+++ r-bioc-affyio-1.48.0/debian/control	2017-11-08 10:19:32.000000000 +0000
@@ -2,14 +2,15 @@
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Uploaders: Andreas Tille <tille@debian.org>
 Section: gnu-r
+Testsuite: autopkgtest-pkg-r
 Priority: optional
-Build-Depends: debhelper (>= 9),
+Build-Depends: debhelper (>= 10),
                dh-r,
                zlib1g-dev,
                r-base-dev
-Standards-Version: 3.9.8
-Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-affyio/trunk/
-Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-affyio/trunk/
+Standards-Version: 4.1.1
+Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/r-bioc-affyio.git
+Vcs-Git: https://anonscm.debian.org/git/debian-med/r-bioc-affyio.git
 Homepage: https://bioconductor.org/packages/affyio/
 
 Package: r-bioc-affyio
diff -Nru r-bioc-affyio-1.44.0/debian/patches/use_debian_packaged_zlib.patch r-bioc-affyio-1.48.0/debian/patches/use_debian_packaged_zlib.patch
--- r-bioc-affyio-1.44.0/debian/patches/use_debian_packaged_zlib.patch	2015-10-29 21:36:58.000000000 +0000
+++ r-bioc-affyio-1.48.0/debian/patches/use_debian_packaged_zlib.patch	2017-11-08 10:19:32.000000000 +0000
@@ -5,11 +5,12 @@
 
 --- a/DESCRIPTION
 +++ b/DESCRIPTION
-@@ -4,7 +4,6 @@ Title: Tools for parsing Affymetrix data
- Author: Benjamin Milo Bolstad <bmb@bmbolstad.com>
- Maintainer: Benjamin Milo Bolstad <bmb@bmbolstad.com>
+@@ -4,7 +4,7 @@ Title: Tools for parsing Affymetrix data
+ Author: Ben Bolstad <bmb@bmbolstad.com>
+ Maintainer: Ben Bolstad <bmb@bmbolstad.com>
  Depends: R (>= 2.6.0)
--Imports: zlibbioc
+-Imports: zlibbioc, methods
++Imports: methods
  Description: Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.
  License: LGPL (>= 2)
  URL: https://github.com/bmbolstad/affyio
@@ -19,4 +20,4 @@
  exportPattern("^[^\\.]")
  useDynLib("affyio")
 -import(zlibbioc)
- 
+ importFrom("methods", "is")
diff -Nru r-bioc-affyio-1.44.0/DESCRIPTION r-bioc-affyio-1.48.0/DESCRIPTION
--- r-bioc-affyio-1.44.0/DESCRIPTION	2016-10-17 22:07:31.000000000 +0000
+++ r-bioc-affyio-1.48.0/DESCRIPTION	2017-10-30 22:37:03.000000000 +0000
@@ -1,14 +1,14 @@
 Package: affyio
-Version: 1.44.0
+Version: 1.48.0
 Title: Tools for parsing Affymetrix data files
-Author: Benjamin Milo Bolstad <bmb@bmbolstad.com>
-Maintainer: Benjamin Milo Bolstad <bmb@bmbolstad.com>
+Author: Ben Bolstad <bmb@bmbolstad.com>
+Maintainer: Ben Bolstad <bmb@bmbolstad.com>
 Depends: R (>= 2.6.0)
-Imports: zlibbioc
+Imports: zlibbioc, methods
 Description: Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.
 License: LGPL (>= 2)
 URL: https://github.com/bmbolstad/affyio
 biocViews: Microarray, DataImport, Infrastructure
 LazyLoad: yes
 NeedsCompilation: yes
-Packaged: 2016-10-17 22:07:31 UTC; biocbuild
+Packaged: 2017-10-30 22:37:03 UTC; biocbuild
diff -Nru r-bioc-affyio-1.44.0/NAMESPACE r-bioc-affyio-1.48.0/NAMESPACE
--- r-bioc-affyio-1.44.0/NAMESPACE	2016-10-17 20:23:25.000000000 +0000
+++ r-bioc-affyio-1.48.0/NAMESPACE	2017-10-30 21:17:15.000000000 +0000
@@ -1,4 +1,4 @@
 exportPattern("^[^\\.]")
 useDynLib("affyio")
 import(zlibbioc)
-
+importFrom("methods", "is")
diff -Nru r-bioc-affyio-1.44.0/src/fread_functions.c r-bioc-affyio-1.48.0/src/fread_functions.c
--- r-bioc-affyio-1.44.0/src/fread_functions.c	2016-10-17 22:07:31.000000000 +0000
+++ r-bioc-affyio-1.48.0/src/fread_functions.c	2017-10-30 22:37:03.000000000 +0000
@@ -407,7 +407,7 @@
  ************************************************************************/
 
 
-size_t gzread_int32(int *destination, int n, gzFile *instream){
+size_t gzread_int32(int *destination, int n, gzFile instream){
 
   size_t result;
   
@@ -431,7 +431,7 @@
 
 
 
-size_t gzread_uint32(unsigned int *destination, int n, gzFile *instream){
+size_t gzread_uint32(unsigned int *destination, int n, gzFile instream){
 
 
   size_t result;
@@ -452,7 +452,7 @@
 
 
 
-size_t gzread_int16(short *destination, int n, gzFile *instream){
+size_t gzread_int16(short *destination, int n, gzFile instream){
    size_t result;
 
    result = gzread(instream,destination,sizeof(short)*n);
@@ -470,7 +470,7 @@
 
 
 
-size_t gzread_uint16(unsigned short *destination, int n, gzFile *instream){
+size_t gzread_uint16(unsigned short *destination, int n, gzFile instream){
    size_t result;
 
    result = gzread(instream,destination,sizeof(unsigned short)*n);
@@ -489,7 +489,7 @@
 
 
 
-size_t gzread_float32(float *destination, int n, gzFile *instream){
+size_t gzread_float32(float *destination, int n, gzFile instream){
 
   size_t result;
 
@@ -506,7 +506,7 @@
   return result;
 }
 
-size_t gzread_char(char *destination, int n, gzFile *instream){
+size_t gzread_char(char *destination, int n, gzFile instream){
 
   size_t result;
   
@@ -522,7 +522,7 @@
 }
 
 
-size_t gzread_uchar(unsigned char *destination, int n, gzFile *instream){
+size_t gzread_uchar(unsigned char *destination, int n, gzFile instream){
 
   size_t result;
   
@@ -540,7 +540,7 @@
 
 
 
-size_t gzread_double64(double *destination, int n, gzFile *instream){
+size_t gzread_double64(double *destination, int n, gzFile instream){
 
   size_t result;
   
@@ -568,7 +568,7 @@
  ************************************************************************/
 
 
-size_t gzread_be_int32(int *destination, int n, gzFile *instream){
+size_t gzread_be_int32(int *destination, int n, gzFile instream){
 
   size_t result;
   
@@ -592,7 +592,7 @@
 
 
 
-size_t gzread_be_uint32(unsigned int *destination, int n, gzFile *instream){
+size_t gzread_be_uint32(unsigned int *destination, int n, gzFile instream){
 
 
   size_t result;
@@ -614,7 +614,7 @@
 
 
 
-size_t gzread_be_int16(short *destination, int n, gzFile *instream){
+size_t gzread_be_int16(short *destination, int n, gzFile instream){
    size_t result;
 
    result = gzread(instream,destination,sizeof(short)*n);
@@ -630,7 +630,7 @@
 }
 
 
-size_t gzread_be_uint16(unsigned short *destination, int n, gzFile *instream){
+size_t gzread_be_uint16(unsigned short *destination, int n, gzFile instream){
    size_t result;
 
    result = gzread(instream,destination,sizeof(unsigned short)*n);
@@ -648,7 +648,7 @@
 
 
 
-size_t gzread_be_float32(float *destination, int n, gzFile *instream){
+size_t gzread_be_float32(float *destination, int n, gzFile instream){
 
   size_t result;
 
@@ -666,7 +666,7 @@
 }
 
 
-size_t gzread_be_char(char *destination, int n, gzFile *instream){
+size_t gzread_be_char(char *destination, int n, gzFile instream){
 
   size_t result;
   
@@ -683,7 +683,7 @@
 
 
 
-size_t gzread_be_uchar(unsigned char *destination, int n, gzFile *instream){
+size_t gzread_be_uchar(unsigned char *destination, int n, gzFile instream){
 
   size_t result;
   
@@ -699,7 +699,7 @@
 }
 
 
-size_t gzread_be_double64(double *destination, int n, gzFile *instream){
+size_t gzread_be_double64(double *destination, int n, gzFile instream){
 
   size_t result;
   
diff -Nru r-bioc-affyio-1.44.0/src/fread_functions.h r-bioc-affyio-1.48.0/src/fread_functions.h
--- r-bioc-affyio-1.44.0/src/fread_functions.h	2016-10-17 22:07:31.000000000 +0000
+++ r-bioc-affyio-1.48.0/src/fread_functions.h	2017-10-30 22:37:03.000000000 +0000
@@ -36,23 +36,23 @@
 size_t fread_be_wchar(wchar_t *destination, int n, FILE *instream);
 
 #if defined(HAVE_ZLIB)
-size_t gzread_int32(int *destination, int n, gzFile *instream);
-size_t gzread_uint32(unsigned int *destination, int n, gzFile *instream);
-size_t gzread_int16(short *destination, int n, gzFile *instream);
-size_t gzread_uint16(unsigned short *destination, int n, gzFile *instream);
-size_t gzread_float32(float *destination, int n, gzFile *instream);
-size_t gzread_char(char *destination, int n, gzFile *instream);
-size_t gzread_uchar(unsigned char *destination, int n, gzFile *instream);
-size_t gzread_double64(double *destination, int n, gzFile *instream);
+size_t gzread_int32(int *destination, int n, gzFile instream);
+size_t gzread_uint32(unsigned int *destination, int n, gzFile instream);
+size_t gzread_int16(short *destination, int n, gzFile instream);
+size_t gzread_uint16(unsigned short *destination, int n, gzFile instream);
+size_t gzread_float32(float *destination, int n, gzFile instream);
+size_t gzread_char(char *destination, int n, gzFile instream);
+size_t gzread_uchar(unsigned char *destination, int n, gzFile instream);
+size_t gzread_double64(double *destination, int n, gzFile instream);
 
-size_t gzread_be_int32(int *destination, int n, gzFile *instream);
-size_t gzread_be_uint32(unsigned int *destination, int n, gzFile *instream);
-size_t gzread_be_int16(short *destination, int n, gzFile *instream);
-size_t gzread_be_uint16(unsigned short *destination, int n, gzFile *instream);
-size_t gzread_be_float32(float *destination, int n, gzFile *instream);
-size_t gzread_be_char(char *destination, int n, gzFile *instream);
-size_t gzread_be_uchar(unsigned char *destination, int n, gzFile *instream);
-size_t gzread_be_double64(double *destination, int n, gzFile *instream);
+size_t gzread_be_int32(int *destination, int n, gzFile instream);
+size_t gzread_be_uint32(unsigned int *destination, int n, gzFile instream);
+size_t gzread_be_int16(short *destination, int n, gzFile instream);
+size_t gzread_be_uint16(unsigned short *destination, int n, gzFile instream);
+size_t gzread_be_float32(float *destination, int n, gzFile instream);
+size_t gzread_be_char(char *destination, int n, gzFile instream);
+size_t gzread_be_uchar(unsigned char *destination, int n, gzFile instream);
+size_t gzread_be_double64(double *destination, int n, gzFile instream);
 
 #endif
 
diff -Nru r-bioc-affyio-1.44.0/src/Makevars r-bioc-affyio-1.48.0/src/Makevars
--- r-bioc-affyio-1.44.0/src/Makevars	2016-10-17 22:07:31.000000000 +0000
+++ r-bioc-affyio-1.48.0/src/Makevars	2017-10-30 22:37:03.000000000 +0000
@@ -1,3 +1,3 @@
 PKG_CFLAGS = -g -O2  
-PKG_LIBS = -lpthread -lz  -lpthread
-PKG_CPPFLAGS = -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1
+PKG_LIBS = -lpthread -lz 
+PKG_CPPFLAGS = -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1
diff -Nru r-bioc-affyio-1.44.0/src/read_abatch.c r-bioc-affyio-1.48.0/src/read_abatch.c
--- r-bioc-affyio-1.44.0/src/read_abatch.c	2016-10-17 22:07:31.000000000 +0000
+++ r-bioc-affyio-1.48.0/src/read_abatch.c	2017-10-30 22:37:03.000000000 +0000
@@ -151,6 +151,8 @@
  ** Nov 10, 2009 - Pthread on solaris fix
  ** May 26, 2010 - Multichannel CEL file support initiated 
  ** Sept 18, 2013 -  improve 64bit support for read_abatch
+ ** Jun 22, 2016 - Define PTHREAD_STACK_MIN if missing (e.g. Intel compiler) (DCT)
+ ** Sept 4, 2017 - change gzFile* to gzFile
  ** 
  *************************************************************/
  
@@ -177,6 +179,13 @@
 #include <limits.h>
 #include <unistd.h>
 
+
+// Intel Compiler doesn't have PTHREAD_STACK_MIN in limits.h
+//Set to 16K - (Linux standard for x86 / x86_64 (4 x 4K pages)
+#ifndef PTHREAD_STACK_MIN
+#define PTHREAD_STACK_MIN 16384
+#endif
+
 pthread_mutex_t mutex_R;
 int n_probesets;
 int *n_probes = NULL;
@@ -732,7 +741,7 @@
 #endif  
 
   size_t i, cur_x,cur_y,cur_index;
-  double cur_mean, cur_stddev;
+  double cur_stddev;
   FILE *currentFile; 
   char buffer[BUF_SIZE];
   /* tokenset *cur_tokenset;*/
@@ -785,7 +794,7 @@
       Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows);
       break;
     }
-    cur_mean = atof(current_token);
+   
 #if USE_PTHREADS
     current_token = strtok_r(NULL," \t",&tmp_pointer);
 #else
@@ -838,7 +847,7 @@
 #endif  
 
   size_t i, cur_x,cur_y,cur_index,cur_npixels;
-  double cur_mean, cur_stddev;
+
   FILE *currentFile; 
   char buffer[BUF_SIZE];
   /* tokenset *cur_tokenset;*/
@@ -892,7 +901,7 @@
       break;
     }
     
-    cur_mean = atof(current_token);
+
 
 #if USE_PTHREADS
     current_token = strtok_r(NULL," \t",&tmp_pointer);
@@ -903,7 +912,7 @@
       Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows);
       break;
     }
-    cur_stddev = atof(current_token);
+
    
 #if USE_PTHREADS
     current_token = strtok_r(NULL," \t",&tmp_pointer);
@@ -1400,7 +1409,7 @@
 
 /******************************************************************
  **
- ** void gzfindStartsWith(gzFile *my_file,char *starts, char *buffer)
+ ** void gzfindStartsWith(gzFile my_file,char *starts, char *buffer)
  **
  ** FILE *my_file - an open file to read from
  ** char *starts - the string to search for at the start of each line
@@ -1627,7 +1636,7 @@
 #endif  
   
   size_t i, cur_x,cur_y,cur_index;
-  double cur_mean, cur_stddev;
+  double cur_stddev;
   gzFile currentFile; 
   char buffer[BUF_SIZE];
   /* tokenset *cur_tokenset;*/
@@ -1679,7 +1688,7 @@
       break;
     }
 
-    cur_mean = atof(current_token);
+
 #if USE_PTHREADS
     current_token = strtok_r(NULL," \t",&tmp_pointer);
 #else
@@ -1732,7 +1741,7 @@
 #endif  
 
   size_t i, cur_x,cur_y,cur_index,cur_npixels;
-  double cur_mean, cur_stddev;
+
   gzFile currentFile; 
   char buffer[BUF_SIZE];
   /* tokenset *cur_tokenset;*/
@@ -1780,7 +1789,7 @@
       Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows);
       break;
     }
-    cur_mean = atof(current_token);
+
 #if USE_PTHREADS
     current_token = strtok_r(NULL," \t",&tmp_pointer);
 #else
@@ -1790,7 +1799,7 @@
       Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows);
       break;
     }
-    cur_stddev = atof(current_token);
+
 #if USE_PTHREADS
     current_token = strtok_r(NULL," \t",&tmp_pointer);
 #else
@@ -1980,7 +1989,7 @@
 static void gz_get_detailed_header_info(const char *filename, detailed_header_info *header_info){
 
   int i,endpos;
-  gzFile *currentFile; 
+  gzFile currentFile; 
   char buffer[BUF_SIZE];
   char *buffercopy;
 
@@ -2090,7 +2099,7 @@
 
 static void gz_get_masks_outliers(const char *filename, int *nmasks, short **masks_x, short **masks_y, int *noutliers, short **outliers_x, short **outliers_y){
   
-  gzFile *currentFile;
+  gzFile currentFile;
   char buffer[BUF_SIZE];
   int numcells, cur_x, cur_y;
   tokenset *cur_tokenset;
@@ -2320,7 +2329,7 @@
   unsigned int n_masks;
   int n_subgrids;
   FILE *infile;
-  gzFile *gzinfile;
+  gzFile gzinfile;
 
 } binary_header;
 
@@ -3133,7 +3142,7 @@
 
 static int isgzBinaryCelFile(const char *filename){
 
-  gzFile *infile;
+  gzFile infile;
 
   int magicnumber;
   int version_number;
@@ -3183,7 +3192,7 @@
 
 static binary_header *gzread_binary_header(const char *filename, int return_stream){  /* , FILE *infile){ */
   
-  gzFile *infile;
+  gzFile infile;
 
   binary_header *this_header = Calloc(1,binary_header);
   
@@ -3594,7 +3603,7 @@
 	return 1;
       }     
       if (cur_intensity->cur_intens < 0 || cur_intensity->cur_intens > 65536 || isnan(cur_intensity->cur_intens)){
-	gzclose(my_header->infile);
+	gzclose(my_header->gzinfile);
 	delete_binary_header(my_header);
 	Free(cur_intensity);
 	return 1;
@@ -3689,7 +3698,7 @@
       fread_err+= gzread_float32(&(cur_intensity->cur_sd),1,my_header->gzinfile);
       fread_err+= gzread_int16(&(cur_intensity->npixels),1,my_header->gzinfile);  
       if (fread_err < 3){
-	gzclose(my_header->infile);
+	gzclose(my_header->gzinfile);
 	delete_binary_header(my_header);
 	Free(cur_intensity);
 	return 1;
@@ -3732,7 +3741,7 @@
   sizeofrecords = 2*sizeof(float) + sizeof(short); /* sizeof(celintens_record) */
   
   //fseek(my_header->infile,my_header->n_cells*sizeofrecords,SEEK_CUR);
-  gzseek(my_header->infile,my_header->n_cells*sizeofrecords,SEEK_CUR);
+  gzseek(my_header->gzinfile,my_header->n_cells*sizeofrecords,SEEK_CUR);
   if (rm_mask){
     for (i =0; i < my_header->n_masks; i++){
       gzread_int16(&(cur_loc->x),1,my_header->gzinfile);
@@ -4366,7 +4375,7 @@
 void *readfile_group(void *data){
    int num;
    struct thread_data *args = (struct thread_data *) data;
-   SEXP Current_intensity;
+   
 
    args->CurintensityMatrix = Calloc(args->ref_dim_1*args->ref_dim_2, double);
 
@@ -4435,7 +4444,11 @@
 
   const char *cur_file_name;
   const char *cdfName;
-  double *CurintensityMatrix, *pmMatrix=0, *mmMatrix=0;
+  double *pmMatrix=0, *mmMatrix=0;
+
+#ifndef USE_PTHREADS
+  double *CurintensityMatrix;
+#endif
 
   SEXP PM_intensity= R_NilValue, MM_intensity= R_NilValue, Current_intensity, names, dimnames;
   SEXP output_list,pmmmnames;
@@ -4476,7 +4489,10 @@
   PROTECT(Current_intensity = allocMatrix(REALSXP, ref_dim_1*ref_dim_2, 1));
  
   cdfName = CHAR(STRING_ELT(ref_cdfName,0));
+
+#ifndef USE_PTHREADS
   CurintensityMatrix = NUMERIC_POINTER(AS_NUMERIC(Current_intensity));
+#endif
   
   /* Lets count how many probes we have */
   
diff -Nru r-bioc-affyio-1.44.0/src/read_bpmap.c r-bioc-affyio-1.48.0/src/read_bpmap.c
--- r-bioc-affyio-1.44.0/src/read_bpmap.c	2016-10-17 22:07:31.000000000 +0000
+++ r-bioc-affyio-1.48.0/src/read_bpmap.c	2017-10-30 22:37:03.000000000 +0000
@@ -75,7 +75,7 @@
 
   char *Magicnumber = R_alloc(8,sizeof(char));
   float version_number = 0.0;
-  int version_number_int;
+  
   unsigned int unsigned_version_number_int;
 
 
diff -Nru r-bioc-affyio-1.44.0/src/read_cdffile2.c r-bioc-affyio-1.48.0/src/read_cdffile2.c
--- r-bioc-affyio-1.44.0/src/read_cdffile2.c	2016-10-17 22:07:31.000000000 +0000
+++ r-bioc-affyio-1.48.0/src/read_cdffile2.c	2017-10-30 22:37:03.000000000 +0000
@@ -1068,7 +1068,7 @@
   SEXP UNITSProbeInfoNames;
   SEXP UNITSProbeInforow_names;
 
-  char buf[10]; /* temporary buffer for making names */
+  char buf[11]; /* temporary buffer for making names */
   int i,j,k,l;
   int tmpsum =0;
 						
diff -Nru r-bioc-affyio-1.44.0/src/read_cdf_xda.c r-bioc-affyio-1.48.0/src/read_cdf_xda.c
--- r-bioc-affyio-1.44.0/src/read_cdf_xda.c	2016-10-17 22:07:31.000000000 +0000
+++ r-bioc-affyio-1.48.0/src/read_cdf_xda.c	2017-10-30 22:37:03.000000000 +0000
@@ -1030,7 +1030,7 @@
 
 
 
-  char buf[10];
+  char buf[11];
   int i,j,k;
 
   cdf_xda my_cdf;
diff -Nru r-bioc-affyio-1.44.0/src/read_celfile_generic.c r-bioc-affyio-1.48.0/src/read_celfile_generic.c
--- r-bioc-affyio-1.44.0/src/read_celfile_generic.c	2016-10-17 22:07:31.000000000 +0000
+++ r-bioc-affyio-1.48.0/src/read_celfile_generic.c	2017-10-30 22:37:03.000000000 +0000
@@ -24,6 +24,7 @@
  ** Feb 13, 2008 - fix problems with generic_get_detailed_header_info(), gzgeneric_get_detailed_header_info()
  ** May 18, 2009 - Add Ability to extract scan date from CEL file header
  ** Sep 19, 2013 - Improve ability to deal with large 64bit matrices
+ ** Sept 4, 2017 - change gzFile * to gzFile
  **
  *************************************************************/
 #include <R.h>
@@ -705,10 +706,7 @@
 
 int read_genericcel_file_intensities(const char *filename, double *intensity, size_t chip_num, size_t rows, size_t cols, size_t chip_dim_rows){
 
-  size_t i=0, j=0;
-  size_t cur_index;
-  
-  int fread_err=0;
+  size_t i=0;
   
   FILE *infile;
 
@@ -755,10 +753,7 @@
 
 int read_genericcel_file_stddev(const char *filename, double *intensity, size_t chip_num, size_t rows, size_t cols, size_t chip_dim_rows){
 
-  size_t i=0, j=0;
-  size_t cur_index;
-  
-  int fread_err=0;
+  size_t i=0;
   
   FILE *infile;
 
@@ -809,10 +804,7 @@
 
 int read_genericcel_file_npixels(const char *filename, double *intensity, size_t chip_num, size_t rows, size_t cols, size_t chip_dim_rows){
 
-  size_t i=0, j=0;
-  size_t cur_index;
-  
-  int fread_err=0;
+  size_t i=0;
   
   FILE *infile;
 
@@ -871,10 +863,7 @@
 
 
 
-  int i=0, j=0;
-  int cur_index;
-  
-  int fread_err=0;
+  int i=0;
   
   FILE *infile;
 
@@ -960,13 +949,12 @@
 void generic_apply_masks(const char *filename, double *intensity, size_t chip_num, size_t rows, size_t cols, size_t chip_dim_rows, int rm_mask, int rm_outliers){
 
 
-  size_t i=0, j=0;
+  size_t i=0;
   size_t cur_index;
   
   short cur_x, cur_y;
 
 
-  int fread_err=0;
   int nrows;
   int size;
 
@@ -1060,7 +1048,7 @@
 
 int isgzGenericCelFile(const char *filename){
 
-  gzFile *infile;
+  gzFile infile;
   generic_file_header file_header;
   generic_data_header data_header;
   
@@ -1099,7 +1087,7 @@
 
 char *gzgeneric_get_header_info(const char *filename, int *dim1, int *dim2){
 
-  gzFile *infile;
+  gzFile infile;
   generic_file_header file_header;
   generic_data_header data_header;
 
@@ -1159,7 +1147,7 @@
 
 void gzgeneric_get_detailed_header_info(const char *filename, detailed_header_info *header_info){
   
-  gzFile *infile;
+  gzFile infile;
   generic_file_header file_header;
   generic_data_header data_header;
   nvt_triplet *triplet;
@@ -1646,7 +1634,7 @@
   int dim1, dim2;
 
 
-  gzFile *infile;
+  gzFile infile;
   generic_file_header file_header;
   generic_data_header data_header;
   
@@ -1709,12 +1697,9 @@
 
 int gzread_genericcel_file_intensities(const char *filename, double *intensity, size_t chip_num, size_t rows, size_t cols, size_t chip_dim_rows){
 
-  size_t i=0, j=0;
-  size_t cur_index;
-  
-  int fread_err=0;
+  size_t i=0;
   
-  gzFile *infile;
+  gzFile infile;
 
   generic_file_header my_header;
   generic_data_header my_data_header;
@@ -1760,12 +1745,9 @@
 
 int gzread_genericcel_file_stddev(const char *filename, double *intensity, size_t chip_num, size_t rows, size_t cols, size_t chip_dim_rows){
 
-  size_t i=0, j=0;
-  size_t cur_index;
-  
-  int fread_err=0;
+  size_t i=0;
   
-  gzFile *infile;
+  gzFile infile;
 
   generic_file_header my_header;
   generic_data_header my_data_header;
@@ -1814,12 +1796,9 @@
 
 int gzread_genericcel_file_npixels(const char *filename, double *intensity, size_t chip_num, size_t rows, size_t cols, size_t chip_dim_rows){
 
-  size_t i=0, j=0;
-  size_t cur_index;
-  
-  int fread_err=0;
+  size_t i=0;
   
-  gzFile *infile;
+  gzFile infile;
 
   generic_file_header my_header;
   generic_data_header my_data_header;
@@ -1879,12 +1858,9 @@
 
 
 
-  int i=0, j=0;
-  int cur_index;
-  
-  int fread_err=0;
+  int i=0;
   
-  gzFile *infile;
+  gzFile infile;
 
   generic_file_header my_header;
   generic_data_header my_data_header;
@@ -1968,17 +1944,16 @@
 void gzgeneric_apply_masks(const char *filename, double *intensity, size_t chip_num, size_t rows, size_t cols, size_t chip_dim_rows, int rm_mask, int rm_outliers){
 
 
-  size_t i=0, j=0;
+  size_t i=0;
   size_t cur_index;
   
   short cur_x, cur_y;
 
 
-  int fread_err=0;
   int nrows;
   int size;
 
-  gzFile *infile;
+  gzFile infile;
 
   generic_file_header my_header;
   generic_data_header my_data_header;
diff -Nru r-bioc-affyio-1.44.0/src/read_clf.c r-bioc-affyio-1.48.0/src/read_clf.c
--- r-bioc-affyio-1.44.0/src/read_clf.c	2016-10-17 22:07:31.000000000 +0000
+++ r-bioc-affyio-1.48.0/src/read_clf.c	2017-10-30 22:37:03.000000000 +0000
@@ -554,7 +554,7 @@
 
 
   tokenset *cur_tokenset;
-  int i;
+
   char *temp_str;
   
   
diff -Nru r-bioc-affyio-1.44.0/src/read_generic.c r-bioc-affyio-1.48.0/src/read_generic.c
--- r-bioc-affyio-1.44.0/src/read_generic.c	2016-10-17 22:07:31.000000000 +0000
+++ r-bioc-affyio-1.48.0/src/read_generic.c	2017-10-30 22:37:03.000000000 +0000
@@ -27,6 +27,7 @@
  ** Jan 15, 2008 - Fix VECTOR_ELT/STRING_ELT issues
  ** Feb, 2011 - Some debugging code for checking Generic file format parsing
  ** Nov, 2011 - Some additional fixed to deal with fixed width fields for strings in dataset rows
+ ** Sept 4, 2017 - change gzFile * to gzFile
  **
  *************************************************************/
 
@@ -903,7 +904,7 @@
 
 
 
-static int gzread_ASTRING(ASTRING *destination, gzFile *instream){
+static int gzread_ASTRING(ASTRING *destination, gzFile instream){
 
   gzread_be_int32(&(destination->len),1,instream);
   if (destination->len > 0){
@@ -917,7 +918,7 @@
 
 
 
-static int gzread_ASTRING_fw(ASTRING *destination, gzFile *instream, int length){
+static int gzread_ASTRING_fw(ASTRING *destination, gzFile instream, int length){
 
   gzread_be_int32(&(destination->len),1,instream);
   if (destination->len > 0){
@@ -933,7 +934,7 @@
 }
 
 
-static int gzread_AWSTRING(AWSTRING *destination, gzFile *instream){
+static int gzread_AWSTRING(AWSTRING *destination, gzFile instream){
 
   uint16_t temp;   /* Affy file wchar_t are 16 bits, the platform may have  32 bit wchar_t (notatbly linux) */
 
@@ -955,7 +956,7 @@
 }
 
 
-static int gzread_AWSTRING_fw(AWSTRING *destination, gzFile *instream, int length){
+static int gzread_AWSTRING_fw(AWSTRING *destination, gzFile instream, int length){
 
   uint16_t temp;   /* Affy file wchar_t are 16 bits, the platform may have  32 bit wchar_t (notatbly linux) */
 
@@ -981,7 +982,7 @@
 }
 
 
-static int gzread_nvt_triplet(nvt_triplet *destination, gzFile *instream){
+static int gzread_nvt_triplet(nvt_triplet *destination, gzFile instream){
 
   if (!(gzread_AWSTRING(&(destination->name),instream)) ||
       !(gzread_ASTRING(&(destination->value),instream)) ||
@@ -993,7 +994,7 @@
 
 
 
-static int gzread_nvts_triplet(col_nvts_triplet *destination, gzFile *instream){
+static int gzread_nvts_triplet(col_nvts_triplet *destination, gzFile instream){
 
   if (!(gzread_AWSTRING(&(destination->name),instream)) ||
       !(gzread_be_uchar(&(destination->type), 1, instream)) ||
@@ -1004,7 +1005,7 @@
 }
 
 
-int gzread_generic_file_header(generic_file_header* file_header, gzFile *instream){
+int gzread_generic_file_header(generic_file_header* file_header, gzFile instream){
 
   if (!gzread_be_uchar(&(file_header->magic_number),1,instream)){
     return 0;
@@ -1032,7 +1033,7 @@
 
 
 
-int gzread_generic_data_header(generic_data_header *data_header, gzFile *instream){
+int gzread_generic_data_header(generic_data_header *data_header, gzFile instream){
   
   int i;
 
@@ -1074,7 +1075,7 @@
 
 
 
-int gzread_generic_data_group(generic_data_group *data_group, gzFile *instream){
+int gzread_generic_data_group(generic_data_group *data_group, gzFile instream){
   
   if (!gzread_be_uint32(&(data_group->file_position_nextgroup),1,instream) ||
       !gzread_be_uint32(&(data_group->file_position_first_data),1,instream) ||
@@ -1090,7 +1091,7 @@
 
 
 
-int gzread_generic_data_set(generic_data_set *data_set, gzFile *instream){
+int gzread_generic_data_set(generic_data_set *data_set, gzFile instream){
 
   int i;
 
@@ -1159,7 +1160,7 @@
 
 
 
-int gzread_generic_data_set_rows(generic_data_set *data_set, gzFile *instream){
+int gzread_generic_data_set_rows(generic_data_set *data_set, gzFile instream){
 
   int i,j;
   
@@ -1493,7 +1494,7 @@
 
   SEXP return_value = R_NilValue;
 
-  gzFile *infile;
+  gzFile infile;
 
   generic_file_header my_header;
   generic_data_header my_data_header;
diff -Nru r-bioc-affyio-1.44.0/src/read_generic.h r-bioc-affyio-1.48.0/src/read_generic.h
--- r-bioc-affyio-1.44.0/src/read_generic.h	2016-10-17 22:07:31.000000000 +0000
+++ r-bioc-affyio-1.48.0/src/read_generic.h	2017-10-30 22:37:03.000000000 +0000
@@ -134,8 +134,8 @@
 void Free_generic_data_set(generic_data_set *data_set);
 
 
-int gzread_generic_file_header(generic_file_header* file_header, gzFile *instream);
-int gzread_generic_data_header(generic_data_header *data_header, gzFile *instream);
-int gzread_generic_data_group(generic_data_group *data_group,gzFile *instream);
-int gzread_generic_data_set(generic_data_set *data_set, gzFile *instream);
-int gzread_generic_data_set_rows(generic_data_set *data_set, gzFile *instream);
+int gzread_generic_file_header(generic_file_header* file_header, gzFile instream);
+int gzread_generic_data_header(generic_data_header *data_header, gzFile instream);
+int gzread_generic_data_group(generic_data_group *data_group,gzFile instream);
+int gzread_generic_data_set(generic_data_set *data_set, gzFile instream);
+int gzread_generic_data_set_rows(generic_data_set *data_set, gzFile instream);
diff -Nru r-bioc-affyio-1.44.0/src/read_multichannel_celfile_generic.c r-bioc-affyio-1.48.0/src/read_multichannel_celfile_generic.c
--- r-bioc-affyio-1.44.0/src/read_multichannel_celfile_generic.c	2016-10-17 22:07:31.000000000 +0000
+++ r-bioc-affyio-1.48.0/src/read_multichannel_celfile_generic.c	2017-10-30 22:37:03.000000000 +0000
@@ -24,6 +24,7 @@
  ** Feb 13, 2008 - fix problems with generic_get_detailed_header_info(), gzgeneric_get_detailed_header_info()
  ** May 18, 2009 - Add Ability to extract scan date from CEL file header
  ** May 25, 2010 - Multichannel CELfile support adapted from single channel parser
+ ** Sep 4, 2017 - change gzFile* to gzFile
  **
  *************************************************************/
 #include <R.h>
@@ -102,11 +103,9 @@
 
 int multichannel_determine_number_channels(const char *filename){
   
-  int i=0, j=0, k=0;
-  int cur_index;
+  int j=0;
   int returnvalue = 0;
   
-  int fread_err=0;
   
   FILE *infile;
   
@@ -158,21 +157,16 @@
 
 char *multichannel_determine_channel_name(const char *filename, int channelindex){
   
-  int i=0, j=0, k=0;
-  int cur_index;
+  int k=0;
   char *returnvalue = 0;
   
-  int fread_err=0;
-  
   FILE *infile;
   
   generic_file_header my_header;
   generic_data_header my_data_header;
   generic_data_group my_data_group;
   
-  generic_data_set my_data_set;
-
-  uint32_t next_group =1;  
+    uint32_t next_group =1;  
 
 
   if ((infile = fopen(filename, "rb")) == NULL)
@@ -217,10 +211,7 @@
 
 int read_genericcel_file_intensities_multichannel(const char *filename, double *intensity, int chip_num, int rows, int cols,int chip_dim_rows, int channelindex){
 
-  int i=0, j=0, k=0;
-  int cur_index;
-  
-  int fread_err=0;
+  int i=0, k=0;
   
   FILE *infile;
 
@@ -274,11 +265,8 @@
 
 int read_genericcel_file_stddev_multichannel(const char *filename, double *intensity, int chip_num, int rows, int cols,int chip_dim_rows, int channelindex){
 
-  int i=0, j=0, k=0;
-  int cur_index;
-  
-  int fread_err=0;
-  
+  int i=0, k=0;
+    
   FILE *infile;
 
   generic_file_header my_header;
@@ -338,10 +326,7 @@
 
 int read_genericcel_file_npixels_multichannel(const char *filename, double *intensity, int chip_num, int rows, int cols,int chip_dim_rows,  int channelindex){
 
-  int i=0, j=0, k=0;
-  int cur_index;
-  
-  int fread_err=0;
+  int i=0, k=0;
   
   FILE *infile;
 
@@ -409,14 +394,8 @@
 
 void generic_get_masks_outliers_multichannel(const char *filename, int *nmasks, short **masks_x, short **masks_y, int *noutliers, short **outliers_x, short **outliers_y, int channelindex){
 
-
-
-
-  int i=0, j=0, k=0;
-  int cur_index;
-  
-  int fread_err=0;
-  
+  int i=0, k=0;
+    
   FILE *infile;
 
   generic_file_header my_header;
@@ -513,13 +492,12 @@
 void generic_apply_masks_multichannel(const char *filename, double *intensity, int chip_num, int rows, int cols,int chip_dim_rows, int rm_mask, int rm_outliers,  int channelindex){
 
 
-  int i=0, j=0;
+  int i=0;
   int cur_index;
   
   short cur_x, cur_y;
 
 
-  int fread_err=0;
   int nrows;
   int size;
 
@@ -613,7 +591,7 @@
 
 int isgzGenericMultiChannelCelFile(const char *filename){
 
-  gzFile *infile;
+  gzFile infile;
   generic_file_header file_header;
   generic_data_header data_header;
   
@@ -657,13 +635,11 @@
 
 int gzmultichannel_determine_number_channels(const char *filename){
   
-  int i=0, j=0, k=0;
-  int cur_index;
+  int j=0;
+ 
   int returnvalue = 0;
-  
-  int fread_err=0;
-  
-  gzFile *infile;
+   
+  gzFile infile;
   
   generic_file_header my_header;
   generic_data_header my_data_header;
@@ -710,20 +686,16 @@
 
 char *gzmultichannel_determine_channel_name(const char *filename, int channelindex){
   
-  int i=0, j=0, k=0;
-  int cur_index;
+  int k=0;
+
   char *returnvalue = 0;
   
-  int fread_err=0;
-  
-  gzFile *infile;
+  gzFile infile;
   
   generic_file_header my_header;
   generic_data_header my_data_header;
   generic_data_group my_data_group;
   
-  generic_data_set my_data_set;
-
   uint32_t next_group =1;  
 
   if ((infile = gzopen(filename, "rb")) == NULL)
@@ -760,12 +732,9 @@
 
 int gzread_genericcel_file_intensities_multichannel(const char *filename, double *intensity, int chip_num, int rows, int cols,int chip_dim_rows, int channelindex){
 
-  int i=0, j=0, k=0;
-  int cur_index;
-  
-  int fread_err=0;
-  
-  gzFile *infile;
+  int i=0, k=0;
+    
+  gzFile infile;
 
   generic_file_header my_header;
   generic_data_header my_data_header;
@@ -816,12 +785,9 @@
 
 int gzread_genericcel_file_stddev_multichannel(const char *filename, double *intensity, int chip_num, int rows, int cols,int chip_dim_rows,  int channelindex){
 
-  int i=0, j=0, k=0;
-  int cur_index;
-  
-  int fread_err=0;
-  
-  gzFile *infile;
+  int i=0, k=0;
+    
+  gzFile infile;
 
   generic_file_header my_header;
   generic_data_header my_data_header;
@@ -878,12 +844,9 @@
 
 int gzread_genericcel_file_npixels_multichannel(const char *filename, double *intensity, int chip_num, int rows, int cols,int chip_dim_rows,  int channelindex){
 
-  int i=0, j=0, k=0;
-  int cur_index;
-  
-  int fread_err=0;
+  int i=0, k=0;
   
-  gzFile *infile;
+  gzFile infile;
 
   generic_file_header my_header;
   generic_data_header my_data_header;
@@ -945,14 +908,9 @@
 
 void gzgeneric_get_masks_outliers_multichannel(const char *filename, int *nmasks, short **masks_x, short **masks_y, int *noutliers, short **outliers_x, short **outliers_y,  int channelindex){
 
-
-
-  int i=0, j=0, k=0;
-  int cur_index;
-  
-  int fread_err=0;
-  
-  gzFile *infile;
+  int i=0, k=0;
+    
+  gzFile infile;
 
   generic_file_header my_header;
   generic_data_header my_data_header;
@@ -1046,17 +1004,15 @@
 void gzgeneric_apply_masks_multichannel(const char *filename, double *intensity, int chip_num, int rows, int cols,int chip_dim_rows, int rm_mask, int rm_outliers,  int channelindex){
 
 
-  int i=0, j=0;
+  int i=0;
   int cur_index;
   
   short cur_x, cur_y;
 
-
-  int fread_err=0;
   int nrows;
   int size;
 
-  gzFile *infile;
+  gzFile infile;
 
   generic_file_header my_header;
   generic_data_header my_data_header;
diff -Nru r-bioc-affyio-1.44.0/src/read_pgf.c r-bioc-affyio-1.48.0/src/read_pgf.c
--- r-bioc-affyio-1.44.0/src/read_pgf.c	2016-10-17 22:07:31.000000000 +0000
+++ r-bioc-affyio-1.48.0/src/read_pgf.c	2017-10-30 22:37:03.000000000 +0000
@@ -898,7 +898,7 @@
 
 
   tokenset *cur_tokenset;
-  int i;
+
   char *temp_str;
   
   
@@ -1164,7 +1164,7 @@
 
   char *temp_str;
   tokenset *cur_tokenset;
-  probeset_list_node *temp_ptr;
+
 
   probeset_list_node *temp_node = Calloc(1,probeset_list_node);