Binary files /tmp/tmpfGhHyn/RRQev6BD0B/r-cran-future.batchtools-0.8.0/build/vignette.rds and /tmp/tmpfGhHyn/x1uYLfkOH8/r-cran-future.batchtools-0.8.1+dfsg/build/vignette.rds differ
diff -Nru r-cran-future.batchtools-0.8.0/debian/changelog r-cran-future.batchtools-0.8.1+dfsg/debian/changelog
--- r-cran-future.batchtools-0.8.0/debian/changelog	2019-08-13 14:55:13.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/debian/changelog	2019-10-07 08:49:51.000000000 +0000
@@ -1,3 +1,14 @@
+r-cran-future.batchtools (0.8.1+dfsg-1) unstable; urgency=medium
+
+  * Team upload.
+  * New upstream version
+  * Standards-Version: 4.4.1
+  * Trim trailing whitespace.
+  * Set upstream metadata fields: Archive, Bug-Database, Repository.
+  * Remove autogenerated HTML docs since it is including compressed JS
+
+ -- Andreas Tille <tille@debian.org>  Mon, 07 Oct 2019 10:49:51 +0200
+
 r-cran-future.batchtools (0.8.0-1) unstable; urgency=medium
 
   * Initial release (closes: #934695)
diff -Nru r-cran-future.batchtools-0.8.0/debian/control r-cran-future.batchtools-0.8.1+dfsg/debian/control
--- r-cran-future.batchtools-0.8.0/debian/control	2019-08-13 14:55:13.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/debian/control	2019-10-07 08:49:51.000000000 +0000
@@ -7,9 +7,9 @@
 Build-Depends: debhelper-compat (= 12),
                dh-r,
                r-base-dev,
-               r-cran-future (>= 1.12.0),
+               r-cran-future (>= 1.14.0),
                r-cran-batchtools
-Standards-Version: 4.4.0
+Standards-Version: 4.4.1
 Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-cran-future.batchtools
 Vcs-Git: https://salsa.debian.org/r-pkg-team/r-cran-future.batchtools.git
 Homepage: https://cran.r-project.org/package=future.batchtools
@@ -20,8 +20,8 @@
          ${misc:Depends}
 Recommends: ${R:Recommends}
 Suggests: ${R:Suggests},
- gridengine-client,
- slurm-client
+          gridengine-client,
+          slurm-client
 Description: Future API for Parallel and Distributed Processing
  Implementation of the Future API on top of the 'batchtools' package.
  This allows you to process futures, as defined by the 'future' package,
diff -Nru r-cran-future.batchtools-0.8.0/debian/copyright r-cran-future.batchtools-0.8.1+dfsg/debian/copyright
--- r-cran-future.batchtools-0.8.0/debian/copyright	2019-08-13 14:55:13.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/debian/copyright	2019-10-07 08:49:51.000000000 +0000
@@ -2,6 +2,7 @@
 Upstream-Name: future.batchtools
 Upstream-Contact: Henrik Bengtsson <henrikb@braju.com>
 Source: https://cran.r-project.org/package=future.batchtools
+Files-Excluded: */inst/doc/*.html
 
 Files: *
 Copyright: 2019 Henrik Bengtsson
diff -Nru r-cran-future.batchtools-0.8.0/debian/patches/noHightlightJS.patch r-cran-future.batchtools-0.8.1+dfsg/debian/patches/noHightlightJS.patch
--- r-cran-future.batchtools-0.8.0/debian/patches/noHightlightJS.patch	2019-08-13 14:55:13.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/debian/patches/noHightlightJS.patch	1970-01-01 00:00:00.000000000 +0000
@@ -1,14 +0,0 @@
-Index: r-cran-future.batchtools/inst/doc/future.batchtools.html
-===================================================================
---- r-cran-future.batchtools.orig/inst/doc/future.batchtools.html
-+++ r-cran-future.batchtools/inst/doc/future.batchtools.html
-@@ -52,8 +52,8 @@ window.onload = function() {
- </style>
- 
- <!-- R syntax highlighter -->
-+<script src="/path/to/highlight.pack.js"></script>
- <script type="text/javascript">
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diff -Nru r-cran-future.batchtools-0.8.0/debian/patches/series r-cran-future.batchtools-0.8.1+dfsg/debian/patches/series
--- r-cran-future.batchtools-0.8.0/debian/patches/series	2019-08-13 14:55:13.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/debian/patches/series	1970-01-01 00:00:00.000000000 +0000
@@ -1 +0,0 @@
-noHightlightJS.patch
diff -Nru r-cran-future.batchtools-0.8.0/debian/rules r-cran-future.batchtools-0.8.1+dfsg/debian/rules
--- r-cran-future.batchtools-0.8.0/debian/rules	2019-08-13 14:55:13.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/debian/rules	2019-10-07 08:49:51.000000000 +0000
@@ -2,4 +2,3 @@
 
 %:
 	dh $@ --buildsystem R
-
diff -Nru r-cran-future.batchtools-0.8.0/debian/upstream/metadata r-cran-future.batchtools-0.8.1+dfsg/debian/upstream/metadata
--- r-cran-future.batchtools-0.8.0/debian/upstream/metadata	1970-01-01 00:00:00.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/debian/upstream/metadata	2019-10-07 08:49:51.000000000 +0000
@@ -0,0 +1,4 @@
+Archive: CRAN
+Bug-Database: https://github.com/HenrikBengtsson/future.batchtools/issues
+Repository: https://github.com/HenrikBengtsson/future.batchtools
+Repository-Browse: https://github.com/HenrikBengtsson/future.batchtools
diff -Nru r-cran-future.batchtools-0.8.0/debian/watch r-cran-future.batchtools-0.8.1+dfsg/debian/watch
--- r-cran-future.batchtools-0.8.0/debian/watch	2019-08-13 14:55:13.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/debian/watch	2019-10-07 08:49:51.000000000 +0000
@@ -1,2 +1,3 @@
 version=4
+opts="repacksuffix=+dfsg,dversionmangle=s/\+dfsg[0-9]*//g,repack,compression=xz" \
 https://cloud.r-project.org/src/contrib/future.batchtools_([-\d.]*)\.tar\.gz
diff -Nru r-cran-future.batchtools-0.8.0/DESCRIPTION r-cran-future.batchtools-0.8.1+dfsg/DESCRIPTION
--- r-cran-future.batchtools-0.8.0/DESCRIPTION	2019-05-05 06:10:02.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/DESCRIPTION	2019-10-01 05:10:05.000000000 +0000
@@ -1,6 +1,6 @@
 Package: future.batchtools
-Version: 0.8.0
-Depends: R (>= 3.2.0), future (>= 1.12.0)
+Version: 0.8.1
+Depends: R (>= 3.2.0), future (>= 1.14.0)
 Imports: batchtools (>= 0.9.11)
 Suggests: future.apply, listenv, markdown, R.rsp
 VignetteBuilder: R.rsp
@@ -20,8 +20,8 @@
 BugReports: https://github.com/HenrikBengtsson/future.batchtools/issues
 RoxygenNote: 6.1.1
 NeedsCompilation: no
-Packaged: 2019-05-05 04:12:17 UTC; hb
+Packaged: 2019-10-01 02:50:03 UTC; hb
 Author: Henrik Bengtsson [aut, cre, cph]
 Maintainer: Henrik Bengtsson <henrikb@braju.com>
 Repository: CRAN
-Date/Publication: 2019-05-05 06:10:02 UTC
+Date/Publication: 2019-10-01 05:10:05 UTC
diff -Nru r-cran-future.batchtools-0.8.0/inst/doc/future.batchtools.html r-cran-future.batchtools-0.8.1+dfsg/inst/doc/future.batchtools.html
--- r-cran-future.batchtools-0.8.0/inst/doc/future.batchtools.html	2019-05-05 04:12:16.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/inst/doc/future.batchtools.html	1970-01-01 00:00:00.000000000 +0000
@@ -1,435 +0,0 @@
-<!DOCTYPE html>
-<html>
-<head>
-<meta http-equiv="Content-Type" content="text/html; charset=utf-8"/>
-
-<title>A Future for batchtools</title>
-
-<script type="text/javascript">
-window.onload = function() {
-  var imgs = document.getElementsByTagName('img'), i, img;
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-<meta name="keywords" content="R, package, vignette, future, synchronous, asynchronous, parallel, cluster, HPC, batchtools">
-<meta name="author" content="Henrik Bengtsson">
-
-</head>
-
-<body>
-<h1>A Future for batchtools</h1>
-
-<h2>Introduction</h2>
-
-<p>The <a href="https://cran.r-project.org/package=future">future</a> package provides a generic API for using futures in R.
-A future is a simple yet powerful mechanism to evaluate an R expression
-and retrieve its value at some point in time.  Futures can be resolved
-in many different ways depending on which strategy is used.
-There are various types of synchronous and asynchronous futures to
-choose from in the <a href="https://cran.r-project.org/package=future">future</a> package.</p>
-
-<p>This package, <a href="https://cran.r-project.org/package=future.batchtools">future.batchtools</a>, provides a type of futures that
-utilizes the <a href="https://cran.r-project.org/package=batchtools">batchtools</a> package.  This means that <em>any</em> type of
-backend that the batchtools package supports can be used as a future.
-More specifically, future.batchtools will allow you or users of your
-package to leverage the compute power of high-performance computing
-(HPC) clusters via a simple switch in settings - without having to
-change any code at all.</p>
-
-<p>For instance, if batchtools is properly configures, the below two
-expressions for futures <code>x</code> and <code>y</code> will be processed on two different
-compute nodes:</p>
-
-<pre><code class="r">&gt; library(&quot;future.batchtools&quot;)
-&gt; plan(batchtools_torque)
-&gt;
-&gt; x %&lt;-% { Sys.sleep(5); 3.14 }
-&gt; y %&lt;-% { Sys.sleep(5); 2.71 }
-&gt; x + y
-[1] 5.85
-</code></pre>
-
-<p>This is obviously a toy example to illustrate what futures look like
-and how to work with them.</p>
-
-<p>A more realistic example comes from the field of cancer research
-where very large data FASTQ files, which hold a large number of short
-DNA sequence reads, are produced.  The first step toward a biological
-interpretation of these data is to align the reads in each sample
-(one FASTQ file) toward the human genome.  In order to speed this up,
-we can have each file be processed by a separate compute node and each
-node we can use 24 parallel processes such that each process aligns a
-separate chromosome.  Here is an outline of how this nested parallelism
-could be implemented using futures.</p>
-
-<pre><code class="r">library(&quot;future&quot;)
-library(&quot;listenv&quot;)
-## The first level of futures should be submitted to the
-## cluster using batchtools.  The second level of futures
-## should be using multiprocessing, where the number of
-## parallel processes is automatically decided based on
-## what the cluster grants to each compute node.
-plan(list(batchtools_torque, multiprocess))
-
-## Find all samples (one FASTQ file per sample)
-fqs &lt;- dir(pattern = &quot;[.]fastq$&quot;)
-
-## The aligned results are stored in BAM files
-bams &lt;- listenv()
-
-## For all samples (FASTQ files) ...
-for (ss in seq_along(fqs)) {
-  fq &lt;- fqs[ss]
-
-  ## ... use futures to align them ...
-  bams[[ss]] %&lt;-% {
-    bams_ss &lt;- listenv()
-    ## ... and for each FASTQ file use a second layer
-    ## of futures to align the individual chromosomes
-    for (cc in 1:24) {
-      bams_ss[[cc]] %&lt;-% htseq::align(fq, chr = cc)
-    }
-    ## Resolve the &quot;chromosome&quot; futures and return as a list
-    as.list(bams_ss)
-  }
-}
-## Resolve the &quot;sample&quot; futures and return as a list
-bams &lt;- as.list(bams)
-</code></pre>
-
-<p>Note that a user who do not have access to a cluster could use the same script processing samples sequentially and chromosomes in parallel on a single machine using:</p>
-
-<pre><code class="r">plan(list(sequential, multiprocess))
-</code></pre>
-
-<p>or samples in parallel and chromosomes sequentially using:</p>
-
-<pre><code class="r">plan(list(multiprocess, sequential))
-</code></pre>
-
-<p>For an introduction as well as full details on how to use futures,
-please consult the package vignettes of the <a href="https://cran.r-project.org/package=future">future</a> package.</p>
-
-<h2>Choosing batchtools backend</h2>
-
-<p>The future.batchtools package implements a generic future wrapper
-for all batchtools backends.  Below are the most common types of
-batchtools backends.</p>
-
-<table><thead>
-<tr>
-<th align="left">Backend</th>
-<th align="left">Description</th>
-<th align="left">Alternative in future package</th>
-</tr>
-</thead><tbody>
-<tr>
-<td align="left"><code>batchtools_torque</code></td>
-<td align="left">Futures are evaluated via a <a href="https://en.wikipedia.org/wiki/TORQUE">TORQUE</a> / PBS job scheduler</td>
-<td align="left">N/A</td>
-</tr>
-<tr>
-<td align="left"><code>batchtools_slurm</code></td>
-<td align="left">Futures are evaluated via a <a href="https://en.wikipedia.org/wiki/Slurm_Workload_Manager">Slurm</a> job scheduler</td>
-<td align="left">N/A</td>
-</tr>
-<tr>
-<td align="left"><code>batchtools_sge</code></td>
-<td align="left">Futures are evaluated via a <a href="https://en.wikipedia.org/wiki/Oracle_Grid_Engine">Sun/Oracle Grid Engine (SGE)</a> job scheduler</td>
-<td align="left">N/A</td>
-</tr>
-<tr>
-<td align="left"><code>batchtools_lsf</code></td>
-<td align="left">Futures are evaluated via a <a href="https://en.wikipedia.org/wiki/Platform_LSF">Load Sharing Facility (LSF)</a> job scheduler</td>
-<td align="left">N/A</td>
-</tr>
-<tr>
-<td align="left"><code>batchtools_openlava</code></td>
-<td align="left">Futures are evaluated via an <a href="https://en.wikipedia.org/wiki/OpenLava">OpenLava</a> job scheduler</td>
-<td align="left">N/A</td>
-</tr>
-<tr>
-<td align="left"><code>batchtools_custom</code></td>
-<td align="left">Futures are evaluated via a custom set of cluster functions</td>
-<td align="left">N/A</td>
-</tr>
-<tr>
-<td align="left"><code>batchtools_interactive</code></td>
-<td align="left">sequential evaluation in the calling R environment</td>
-<td align="left"><code>plan(transparent)</code></td>
-</tr>
-<tr>
-<td align="left"><code>batchtools_multicore</code></td>
-<td align="left">parallel evaluation by forking the current R process</td>
-<td align="left"><code>plan(multicore)</code></td>
-</tr>
-<tr>
-<td align="left"><code>batchtools_local</code></td>
-<td align="left">sequential evaluation in a separate R process (on current machine)</td>
-<td align="left"><code>plan(cluster, workers = &quot;localhost&quot;)</code></td>
-</tr>
-</tbody></table>
-
-<h3>Examples</h3>
-
-<p>Below is an examples illustrating how to use <code>batchtools_torque</code> to configure the batchtools backend.  For further details and examples on how to configure batchtools, see the <a href="https://mllg.github.io/batchtools/articles/index.html">batchtools configuration</a> wiki page.</p>
-
-<p>To configure batchtools for job schedulers we need to setup a <code>*.tmpl</code> template
-file that is used to generate the script used by the scheduler.
-This is what a template file for TORQUE / PBS may look like:</p>
-
-<pre><code class="sh">## Job name:
-#PBS -N &lt;%= job.name %&gt;
-
-## Merge standard error and output:
-#PBS -j oe
-
-## Resource parameters:
-&lt;% for (name in names(resources)) { %&gt;
-#PBS -l &lt;%= name %&gt;=&lt;%= resources[[name]] %&gt;
-&lt;% } %&gt;
-
-## Run R:
-R CMD BATCH --no-save --no-restore &quot;&lt;%= rscript %&gt;&quot; /dev/stdout
-</code></pre>
-
-<p>If this template is saved to file <code>batchtools.torque.tmpl</code> (without period)
-in the working directory or as <code>.batchtools.torque.tmpl</code> (with period) the
-user&#39;s home directory, then it will be automatically located by the
-batchtools framework and loaded when doing:</p>
-
-<pre><code class="r">&gt; plan(batchtools_torque)
-</code></pre>
-
-<p>Resource parameters can be specified via argument <code>resources</code> which should be a named list and is passed as is to the template file.  For example, to request that each job would get alloted 12 cores (one a single machine) and up to  5 GiB of memory, use:</p>
-
-<pre><code class="r">&gt; plan(batchtools_torque, resources = list(nodes = &quot;1:ppn=12&quot;, vmem = &quot;5gb&quot;))
-</code></pre>
-
-<p>To specify the <code>resources</code> argument at the same time as using nested future strategies, one can use <code>tweak()</code> to tweak the default arguments.  For instance,</p>
-
-<pre><code class="r">plan(list(
-  tweak(batchtools_torque, resources = list(nodes = &quot;1:ppn=12&quot;, vmem = &quot;5gb&quot;)),
-  multiprocess
-))
-</code></pre>
-
-<p>causes the first level of futures to be submitted via the TORQUE job scheduler requesting 12 cores and 5 GiB of memory per job.  The second level of futures will be evaluated using multiprocessing using the 12 cores given to each job by the scheduler.</p>
-
-<p>A similar filename format is used for the other types of job schedulers supported.  For instance, for Slurm the template file should be named <code>./batchtools.slurm.tmpl</code> or <code>~/.batchtools.slurm.tmpl</code> in order for</p>
-
-<pre><code class="r">&gt; plan(batchtools_slurm)
-</code></pre>
-
-<p>to locate the file automatically.  To specify this template file explicitly, use argument <code>template</code>, e.g.</p>
-
-<pre><code class="r">&gt; plan(batchtools_slurm, template = &quot;/path/to/batchtools.slurm.tmpl&quot;)
-</code></pre>
-
-<p>For further details and examples on how to configure batchtools per se, see the <a href="https://mllg.github.io/batchtools/articles/index.html">batchtools configuration</a> wiki page.</p>
-
-<h2>Demos</h2>
-
-<p>The <a href="https://cran.r-project.org/package=future">future</a> package provides a demo using futures for calculating a
-set of Mandelbrot planes.  The demo does not assume anything about
-what type of futures are used.
-<em>The user has full control of how futures are evaluated</em>.
-For instance, to use local batchtools futures, run the demo as:</p>
-
-<pre><code class="r">library(&quot;future.batchtools&quot;)
-plan(batchtools_local)
-demo(&quot;mandelbrot&quot;, package = &quot;future&quot;, ask = FALSE)
-</code></pre>
-
-<hr/>
-
-<p>Copyright Henrik Bengtsson, 2017</p>
-
-</body>
-
-</html>
diff -Nru r-cran-future.batchtools-0.8.0/inst/doc/future.batchtools.md.rsp r-cran-future.batchtools-0.8.1+dfsg/inst/doc/future.batchtools.md.rsp
--- r-cran-future.batchtools-0.8.0/inst/doc/future.batchtools.md.rsp	2018-07-14 17:20:15.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/inst/doc/future.batchtools.md.rsp	2019-06-05 02:21:15.000000000 +0000
@@ -136,19 +136,30 @@
 file that is used to generate the script used by the scheduler.
 This is what a template file for TORQUE / PBS may look like:
 ```sh
+#!/bin/bash
+
 ## Job name:
-#PBS -N <%%= job.name %%>
+#PBS -N <%%= if (exists("job.name", mode = "character")) job.name else job.hash %%>
+
+## Direct streams to logfile:
+#PBS -o <%%= log.file %%>
 
 ## Merge standard error and output:
 #PBS -j oe
 
-## Resource parameters:
-<%% for (name in names(resources)) { %%>
-#PBS -l <%%= name %%>=<%%= resources[[name]] %%>
+## Email on abort (a) and termination (e), but not when starting (b)
+#PBS -m ae
+
+## Resources needed:
+<%% if (length(resources) > 0) {
+  opts <- unlist(resources, use.names = TRUE)
+  opts <- sprintf("%s=%s", names(opts), opts)
+  opts <- paste(opts, collapse = ",") %%>
+#PBS -l <%%= opts %%>
 <%% } %%>
 
-## Run R:
-R CMD BATCH --no-save --no-restore "<%%= rscript %%>" /dev/stdout
+## Launch R and evaluated the batchtools R job
+Rscript -e 'batchtools::doJobCollection("<%%= uri %%>")'
 ```
 If this template is saved to file `batchtools.torque.tmpl` (without period)
 in the working directory or as `.batchtools.torque.tmpl` (with period) the
diff -Nru r-cran-future.batchtools-0.8.0/MD5 r-cran-future.batchtools-0.8.1+dfsg/MD5
--- r-cran-future.batchtools-0.8.0/MD5	2019-05-05 06:10:03.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/MD5	2019-10-01 05:10:05.000000000 +0000
@@ -1,7 +1,7 @@
-e3fc1003d0b55d03ea3d23863b665b23 *DESCRIPTION
+dad6a1069ffab40327e66cf43c4c5b44 *DESCRIPTION
 af5060939cdff24fd2cb8495ad7e17b8 *NAMESPACE
-0da2845ded92b7cf733b780b488d3d30 *NEWS
-401ae56ae769ccc45e3082399c26577b *R/BatchtoolsFuture-class.R
+116472dbf8de9da035a383a377cb75c2 *NEWS
+fd0854190f5315977ea1f224431b5b5a *R/BatchtoolsFuture-class.R
 6412ad9204255fc0669e286f3d461234 *R/BatchtoolsFutureError.R
 84b9575c37060e083bd28cac12236472 *R/batchtools_custom.R
 905c0d8f75d880e7119db68f2f59ded8 *R/batchtools_interactive.R
@@ -9,18 +9,18 @@
 185371ce46160bf4b2e82bdcee1756e2 *R/batchtools_multicore.R
 a0547593d3fa453068d5c397413fb5b7 *R/batchtools_template.R
 268859a4ab4dfdd009555880dde20b31 *R/future.batchtools-package.R
-39c386ee2d68f820581c81733a03f95f *R/future_cache_path.R
+a2fba29ee821ce561fac43358d56ab23 *R/future_cache_path.R
 c1f8f8dd43040356f0994e2624dd15a3 *R/nbrOfWorkers.R
-87e656748fea51860fbedbce8c12a4b3 *R/resources_OP.R
+1e8d52dcf2b3c592ba2433dcf6525308 *R/resources_OP.R
 037dc0f375fb21b47a39a5bf4fe233b0 *R/temp_registry.R
 0d981e8642f21d33ca5efed12c20ffed *R/utils.R
-ac273c01c7640ccc7276296054d3270f *R/zzz.R
-763b8989c8a2b05e3cd3774ad47a1d50 *build/vignette.rds
+dfc19fd3810e5195801e7bfda6a063f0 *R/zzz.R
+8ca8baec4ab25f1d475e4b533d8ec679 *build/vignette.rds
 4a6587cedeabe8323e86380e48355c45 *demo/00Index
 b4536ab1e6cdecc5902bc891cd22c721 *demo/mandelbrot.R
 b77d65b16eb206b9951c37d68be5a605 *inst/WORDLIST
-a20513f88c214f16bda6ce5ac8aef0f6 *inst/doc/future.batchtools.html
-ac8ea4ecdbcce5f2cfcd6e6933b24aac *inst/doc/future.batchtools.md.rsp
+c7c461bad926fa55749e63430c79dbee *inst/doc/future.batchtools.html
+0d8c0b979dfb3f375c02ec093f22af74 *inst/doc/future.batchtools.md.rsp
 5a1ec0c2d289d6747bba56c054a4bbf5 *inst/templates/torque.tmpl
 a56c5354a30ddaa44fc1e523fe8fae33 *man/BatchtoolsFuture.Rd
 af04c92095a28a7770f51f0581116eec *man/BatchtoolsFutureError.Rd
@@ -36,7 +36,7 @@
 1fd58ddfa26fa073d2b13ae066fd0185 *man/print.BatchtoolsFuture.Rd
 7ce9bd191c4c7f979e676240e1c92700 *man/status.BatchtoolsFuture.Rd
 105eb4a5d6ddda7f9cbe19dafdeda03c *tests/BatchtoolsFuture,gc.R
-caa5a333cc7500fe4f30dc21a96293d3 *tests/BatchtoolsFuture.R
+b93045845fa317dcddd52ee574210e40 *tests/BatchtoolsFuture.R
 8e17675666fb162a2318b38faf48d5ea *tests/BatchtoolsFutureError.R
 01e9efdaff85cd33114df81ecfc852c2 *tests/batchtools_custom.R
 60d2457471e4ba8e466d133cc68d55da *tests/batchtools_hpc.R
@@ -47,13 +47,13 @@
 9a152d28aa0889d49f2bb86e7dcf03e2 *tests/demo.R
 406b1338a1c74203403626cbdbca2ab7 *tests/dotdotdot.R
 0b3f5b41a367c88305c92d3ee1bbcf65 *tests/future,labels.R
-8a881f320fa7645d91a8ac84ac36e068 *tests/future,lazy.R
+03d2e9f9b7f366363605e9047431c814 *tests/future,lazy.R
 36f04d5502f52d4e19b1b3ae453c6d17 *tests/globals,formulas.R
 e00f6eb5f9c66b7198e42b2223085225 *tests/globals,manual.R
 993b087092b9976cc8a815c8b91fe34d *tests/globals,subassignment.R
 c627a028edfb2a98896c6858de8dcafe *tests/globals,tricky.R
 96801dd0ae8b2de345271f7ed2dc7105 *tests/incl/end.R
-b7bb71997484f25bb0a7cd7ecc20c50d *tests/incl/start,load-only.R
+8e8c501d8b74d39cce395344ee527afa *tests/incl/start,load-only.R
 7f88154e15b27406931ed8d62e9e1ce5 *tests/incl/start.R
 3d78ef6ee739cead22bd669d458669bf *tests/nbrOfWorkers.R
 18d068c579041acbdd11fb9ca20beb6d *tests/plan.R
@@ -62,4 +62,4 @@
 d92b43fa79f894ed34705c3bfd2d4124 *tests/utils.R
 e515f265c8f9feba66176b6f5ad116ff *tests/zzz,future_lapply.R
 07b2a78a8a669e36396e8ec395b922df *tests/zzz.onUnload.R
-ac8ea4ecdbcce5f2cfcd6e6933b24aac *vignettes/future.batchtools.md.rsp
+0d8c0b979dfb3f375c02ec093f22af74 *vignettes/future.batchtools.md.rsp
diff -Nru r-cran-future.batchtools-0.8.0/NEWS r-cran-future.batchtools-0.8.1+dfsg/NEWS
--- r-cran-future.batchtools-0.8.0/NEWS	2019-05-05 04:07:12.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/NEWS	2019-10-01 02:48:57.000000000 +0000
@@ -1,6 +1,14 @@
 Package: future.batchtools
 ==========================
 
+Version: 0.8.1 [2019-09-30]
+
+BUG FIXES:
+
+ * print() for BatchtoolsFuture would produce an error if the underlying
+   batchtools Registry was incomplete.
+
+
 Version: 0.8.0 [2019-05-04]
 
 NEW FEATURES:
diff -Nru r-cran-future.batchtools-0.8.0/R/BatchtoolsFuture-class.R r-cran-future.batchtools-0.8.1+dfsg/R/BatchtoolsFuture-class.R
--- r-cran-future.batchtools-0.8.0/R/BatchtoolsFuture-class.R	2019-05-02 21:58:00.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/R/BatchtoolsFuture-class.R	2019-06-22 19:01:15.000000000 +0000
@@ -133,9 +133,9 @@
            class(reg))
   } else {
     printf("batchtools Registry:\n  ")
-    print(reg)
     printf("  File dir exists: %s\n", file_test("-d", reg$file.dir))
     printf("  Work dir exists: %s\n", file_test("-d", reg$work.dir))
+    try(print(reg))
   }
 
   invisible(x)
@@ -305,6 +305,7 @@
   stop_if_not(inherits(result, "FutureResult"))
   future$result <- result
   future$state <- "finished"
+
   if (cleanup) delete(future)
 
   NextMethod()
diff -Nru r-cran-future.batchtools-0.8.0/R/future_cache_path.R r-cran-future.batchtools-0.8.1+dfsg/R/future_cache_path.R
--- r-cran-future.batchtools-0.8.0/R/future_cache_path.R	2019-03-16 05:56:26.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/R/future_cache_path.R	2019-06-08 05:46:57.000000000 +0000
@@ -1,22 +1,23 @@
 #' @importFrom utils file_test sessionInfo
 future_cache_path <- local({
-  ## The path used for this session
-  path <- NULL
+  ## The subfolder used for this session
+  dir <- NULL
 
   function(root_path = Sys.getenv("R_FUTURE_CACHE_PATH", ".future"), absolute = TRUE, create = TRUE) {
-    if (is.null(path)) {
+    if (is.null(dir)) {
       id <- basename(tempdir())
       id <- gsub("Rtmp", "", id, fixed = TRUE)
       timestamp <- format(Sys.time(), format = "%Y%m%d_%H%M%S")
-      dir <- sprintf("%s-%s", timestamp, id)
-      path_tmp <- file.path(root_path, dir)
-      if (create && !file_test("-d", path_tmp)) {
-        dir.create(path_tmp, recursive = TRUE)
-        pathname_tmp <- file.path(path_tmp, "sessioninfo.txt")
-        writeLines(capture_output(print(sessionInfo())), con = pathname_tmp)
-      }
-      path <<- path_tmp
+      dir <<- sprintf("%s-%s", timestamp, id)
     }
+    
+    path <- file.path(root_path, dir)
+    if (create && !file_test("-d", path)) {
+      dir.create(path, recursive = TRUE)
+      pathname <- file.path(path, "sessioninfo.txt")
+      writeLines(capture_output(print(sessionInfo())), con = pathname)
+    }
+
     if (absolute) path <- normalizePath(path, mustWork = FALSE)
 
     path
diff -Nru r-cran-future.batchtools-0.8.0/R/resources_OP.R r-cran-future.batchtools-0.8.1+dfsg/R/resources_OP.R
--- r-cran-future.batchtools-0.8.0/R/resources_OP.R	2019-03-16 05:56:26.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/R/resources_OP.R	2019-06-26 19:46:25.000000000 +0000
@@ -24,7 +24,7 @@
   on.exit(plan(oplan, substitute = FALSE, .call = NULL))
 
   ## Tweak current strategy and apply
-  args <- list(plan(), resources = tweaks, penvir = envir)
+  args <- list(plan("next"), resources = tweaks, penvir = envir)
   strategy <- do.call(tweak, args = args)
   plan(strategy, substitute = FALSE, .call = NULL)
 
diff -Nru r-cran-future.batchtools-0.8.0/R/zzz.R r-cran-future.batchtools-0.8.1+dfsg/R/zzz.R
--- r-cran-future.batchtools-0.8.0/R/zzz.R	2019-03-16 05:56:26.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/R/zzz.R	2019-06-08 06:02:34.000000000 +0000
@@ -1,3 +1,10 @@
+.onLoad <- function(libname, pkgname) {
+  inRCmdCheck <- import_future("inRCmdCheck")
+  if (inRCmdCheck()) {
+    Sys.setenv("R_FUTURE_CACHE_PATH" = file.path(tempdir(), ".future"))
+  }
+}
+
 #' @importFrom utils file_test
 .onUnload <- function(libpath) {
   ## (a) Force finalizer of Future objects to run such
diff -Nru r-cran-future.batchtools-0.8.0/tests/BatchtoolsFuture.R r-cran-future.batchtools-0.8.1+dfsg/tests/BatchtoolsFuture.R
--- r-cran-future.batchtools-0.8.0/tests/BatchtoolsFuture.R	2019-01-23 02:05:21.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/tests/BatchtoolsFuture.R	2019-09-27 21:36:05.000000000 +0000
@@ -14,14 +14,6 @@
 
 message("*** BatchtoolsFuture() - deleting exceptions ...")
 
-## Deleting a non-resolved future
-f <- BatchtoolsFuture({ x <- 1 })
-res <- tryCatch({
-  delete(f)
-}, warning = function(w) w)
-print(res)
-stopifnot(inherits(res, "warning"))
-
 ## Printing a deleted future
 f <- batchtools_local(42L)
 print(f)
diff -Nru r-cran-future.batchtools-0.8.0/tests/future,lazy.R r-cran-future.batchtools-0.8.1+dfsg/tests/future,lazy.R
--- r-cran-future.batchtools-0.8.0/tests/future,lazy.R	2019-01-04 15:32:19.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/tests/future,lazy.R	2019-09-27 21:48:00.000000000 +0000
@@ -15,7 +15,12 @@
   a <- 42
   f <- future(2 * a, lazy = TRUE)
   a <- 21
-  stopifnot(!resolved(f))
+  ## In future (> 1.14.0), resolved() will launch lazy future,
+  ## which means for some backends (e.g. sequential) this means
+  ## that resolved() might end up returning TRUE.
+  if (packageVersion("future") <= "1.14.0") {
+    stopifnot(!resolved(f))
+  }
   f <- resolve(f)
   stopifnot(resolved(f))
   v <- value(f)
@@ -25,7 +30,12 @@
   v %<-% { 2 * a } %lazy% TRUE
   a <- 21
   f <- futureOf(v)  
-  stopifnot(!resolved(f))
+  ## In future (> 1.14.0), resolved() will launch lazy future,
+  ## which means for some backends (e.g. sequential) this means
+  ## that resolved() might end up returning TRUE.
+  if (packageVersion("future") <= "1.14.0") {
+    stopifnot(!resolved(f))
+  }
   f <- resolve(f)
   stopifnot(resolved(f))
   stopifnot(v == 84)
diff -Nru r-cran-future.batchtools-0.8.0/tests/incl/start,load-only.R r-cran-future.batchtools-0.8.1+dfsg/tests/incl/start,load-only.R
--- r-cran-future.batchtools-0.8.0/tests/incl/start,load-only.R	2019-03-16 06:00:01.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/tests/incl/start,load-only.R	2019-06-08 06:10:33.000000000 +0000
@@ -12,6 +12,8 @@
 ## Use local batchtools futures by default
 future::plan(future.batchtools::batchtools_local)
 
+Sys.setenv("R_FUTURE_CACHE_PATH" = file.path(tempdir(), ".future"))
+
 fullTest <- (Sys.getenv("_R_CHECK_FULL_") != "")
 
 isWin32 <- (.Platform$OS.type == "windows" && .Platform$r_arch == "i386")
diff -Nru r-cran-future.batchtools-0.8.0/vignettes/future.batchtools.md.rsp r-cran-future.batchtools-0.8.1+dfsg/vignettes/future.batchtools.md.rsp
--- r-cran-future.batchtools-0.8.0/vignettes/future.batchtools.md.rsp	2018-07-14 17:20:15.000000000 +0000
+++ r-cran-future.batchtools-0.8.1+dfsg/vignettes/future.batchtools.md.rsp	2019-06-05 02:21:15.000000000 +0000
@@ -136,19 +136,30 @@
 file that is used to generate the script used by the scheduler.
 This is what a template file for TORQUE / PBS may look like:
 ```sh
+#!/bin/bash
+
 ## Job name:
-#PBS -N <%%= job.name %%>
+#PBS -N <%%= if (exists("job.name", mode = "character")) job.name else job.hash %%>
+
+## Direct streams to logfile:
+#PBS -o <%%= log.file %%>
 
 ## Merge standard error and output:
 #PBS -j oe
 
-## Resource parameters:
-<%% for (name in names(resources)) { %%>
-#PBS -l <%%= name %%>=<%%= resources[[name]] %%>
+## Email on abort (a) and termination (e), but not when starting (b)
+#PBS -m ae
+
+## Resources needed:
+<%% if (length(resources) > 0) {
+  opts <- unlist(resources, use.names = TRUE)
+  opts <- sprintf("%s=%s", names(opts), opts)
+  opts <- paste(opts, collapse = ",") %%>
+#PBS -l <%%= opts %%>
 <%% } %%>
 
-## Run R:
-R CMD BATCH --no-save --no-restore "<%%= rscript %%>" /dev/stdout
+## Launch R and evaluated the batchtools R job
+Rscript -e 'batchtools::doJobCollection("<%%= uri %%>")'
 ```
 If this template is saved to file `batchtools.torque.tmpl` (without period)
 in the working directory or as `.batchtools.torque.tmpl` (with period) the