diff -Nru r-cran-gee-4.13-19/ChangeLog r-cran-gee-4.13-20/ChangeLog --- r-cran-gee-4.13-19/ChangeLog 2015-06-29 10:03:49.000000000 +0000 +++ r-cran-gee-4.13-20/ChangeLog 2019-11-07 11:14:30.000000000 +0000 @@ -1,3 +1,8 @@ +Version 4.13-20 2019-11-07 + + Note authorship of LINPACK routines in Authors field. + + Version 4.13-19 2015-06-29 register symbols diff -Nru r-cran-gee-4.13-19/debian/changelog r-cran-gee-4.13-20/debian/changelog --- r-cran-gee-4.13-19/debian/changelog 2018-06-15 08:48:43.000000000 +0000 +++ r-cran-gee-4.13-20/debian/changelog 2019-11-12 10:21:55.000000000 +0000 @@ -1,3 +1,15 @@ +r-cran-gee (4.13-20-1) unstable; urgency=medium + + * Team upload. + * New upstream version + * debhelper-compat 12 + * Standards-Version: 4.4.1 + * Remove trailing whitespace in debian/copyright + * Set upstream metadata fields: Archive. + * Add autopkgtest and salsa-ci + + -- Andreas Tille Tue, 12 Nov 2019 11:21:55 +0100 + r-cran-gee (4.13-19-2) unstable; urgency=medium * Team upload. diff -Nru r-cran-gee-4.13-19/debian/compat r-cran-gee-4.13-20/debian/compat --- r-cran-gee-4.13-19/debian/compat 2018-06-15 08:48:43.000000000 +0000 +++ r-cran-gee-4.13-20/debian/compat 1970-01-01 00:00:00.000000000 +0000 @@ -1 +0,0 @@ -11 \ No newline at end of file diff -Nru r-cran-gee-4.13-19/debian/control r-cran-gee-4.13-20/debian/control --- r-cran-gee-4.13-19/debian/control 2018-06-15 08:48:43.000000000 +0000 +++ r-cran-gee-4.13-20/debian/control 2019-11-12 10:21:55.000000000 +0000 @@ -4,10 +4,10 @@ Section: gnu-r Testsuite: autopkgtest-pkg-r Priority: optional -Build-Depends: debhelper (>= 11~), +Build-Depends: debhelper-compat (= 12), dh-r, r-base-dev -Standards-Version: 4.1.4 +Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-cran-gee Vcs-Git: https://salsa.debian.org/r-pkg-team/r-cran-gee.git Homepage: https://cran.r-project.org/package=gee diff -Nru r-cran-gee-4.13-19/debian/copyright r-cran-gee-4.13-20/debian/copyright --- r-cran-gee-4.13-19/debian/copyright 2018-06-15 08:48:43.000000000 +0000 +++ r-cran-gee-4.13-20/debian/copyright 2019-11-12 10:21:55.000000000 +0000 @@ -54,7 +54,7 @@ provided with the distribution. . 3. All advertising materials mentioning features or use of this software - must display the following acknowledgement: + must display the following acknowledgement: This product includes software developed by the copyright holders. . 4. Neither the name of the copyright holders nor the names of its diff -Nru r-cran-gee-4.13-19/debian/docs r-cran-gee-4.13-20/debian/docs --- r-cran-gee-4.13-19/debian/docs 1970-01-01 00:00:00.000000000 +0000 +++ r-cran-gee-4.13-20/debian/docs 2019-11-12 10:21:55.000000000 +0000 @@ -0,0 +1,2 @@ +debian/tests/run-unit-test +tests diff -Nru r-cran-gee-4.13-19/debian/salsa-ci.yml r-cran-gee-4.13-20/debian/salsa-ci.yml --- r-cran-gee-4.13-19/debian/salsa-ci.yml 1970-01-01 00:00:00.000000000 +0000 +++ r-cran-gee-4.13-20/debian/salsa-ci.yml 2019-11-12 10:21:55.000000000 +0000 @@ -0,0 +1,11 @@ +--- +include: + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml + +# R creates .rdb files and .rds with some randomness. +# https://tests.reproducible-builds.org/debian/issues/unstable/randomness_in_r_rdb_rds_databases_issue.html +# Uncomment the following two lines if this package is affected. +#variables: +# SALSA_CI_DISABLE_REPROTEST: 1 + diff -Nru r-cran-gee-4.13-19/debian/tests/control r-cran-gee-4.13-20/debian/tests/control --- r-cran-gee-4.13-19/debian/tests/control 1970-01-01 00:00:00.000000000 +0000 +++ r-cran-gee-4.13-20/debian/tests/control 2019-11-12 10:21:55.000000000 +0000 @@ -0,0 +1,5 @@ +Tests: run-unit-test +Depends: @, +Restrictions: allow-stderr + + diff -Nru r-cran-gee-4.13-19/debian/tests/run-unit-test r-cran-gee-4.13-20/debian/tests/run-unit-test --- r-cran-gee-4.13-19/debian/tests/run-unit-test 1970-01-01 00:00:00.000000000 +0000 +++ r-cran-gee-4.13-20/debian/tests/run-unit-test 2019-11-12 10:21:55.000000000 +0000 @@ -0,0 +1,17 @@ +#!/bin/sh -e + +pkgname=gee +debname=r-cran-gee + +if [ "$AUTOPKGTEST_TMP" = "" ] ; then + AUTOPKGTEST_TMP=`mktemp -d /tmp/${debname}-test.XXXXXX` + trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM +fi +cd $AUTOPKGTEST_TMP +cp -a /usr/share/doc/$debname/tests/* $AUTOPKGTEST_TMP +gunzip -r * +for testfile in *.R; do + echo "BEGIN TEST $testfile" + LC_ALL=C.UTF-8 R --no-save < $testfile +done + diff -Nru r-cran-gee-4.13-19/debian/upstream/metadata r-cran-gee-4.13-20/debian/upstream/metadata --- r-cran-gee-4.13-19/debian/upstream/metadata 1970-01-01 00:00:00.000000000 +0000 +++ r-cran-gee-4.13-20/debian/upstream/metadata 2019-11-12 10:21:55.000000000 +0000 @@ -0,0 +1 @@ +Archive: CRAN diff -Nru r-cran-gee-4.13-19/DESCRIPTION r-cran-gee-4.13-20/DESCRIPTION --- r-cran-gee-4.13-19/DESCRIPTION 2015-06-29 10:42:25.000000000 +0000 +++ r-cran-gee-4.13-20/DESCRIPTION 2019-11-07 13:12:54.000000000 +0000 @@ -1,18 +1,20 @@ Package: gee Title: Generalized Estimation Equation Solver -Version: 4.13-19 +Version: 4.13-20 Depends: stats Suggests: MASS -Date: 2015-06-29 +Date: 2019-11-07 DateNote: Gee version 1998-01-27 Author: Vincent J Carey. Ported to R by Thomas Lumley (versions 3.13 and 4.4) and Brian Ripley (version 4.13). + Files src/dgedi.f and src/dgefa.f are for LINPACK authored by + Cleve Moler. Note that maintainers are not available to give advice on using a package they did not author. Maintainer: Brian Ripley Description: Generalized Estimation Equation solver. License: GPL-2 NeedsCompilation: yes -Packaged: 2015-06-29 10:15:45 UTC; ripley +Packaged: 2019-11-07 11:14:39 UTC; ripley Repository: CRAN -Date/Publication: 2015-06-29 12:42:25 +Date/Publication: 2019-11-07 13:12:54 UTC diff -Nru r-cran-gee-4.13-19/MD5 r-cran-gee-4.13-20/MD5 --- r-cran-gee-4.13-19/MD5 2015-06-29 10:42:25.000000000 +0000 +++ r-cran-gee-4.13-20/MD5 2019-11-07 13:12:54.000000000 +0000 @@ -1,5 +1,5 @@ -84520c41e49b1a67bdce1ee27e2f36ca *ChangeLog -500314134d26f927c421e242c65de111 *DESCRIPTION +ab368f99d9a8116d06aa7e7542186652 *ChangeLog +856ccff6eb5aca470de4927661bacd4c *DESCRIPTION 8ca43cbc842c2336e835926c2166c28b *GPL-2 c23387cfe9d06de5b60d1ae8439691e1 *NAMESPACE c766fddedbb008d657c13df8da8927e0 *PORTING @@ -11,7 +11,7 @@ 2fa4c7011c2bc0f7449ae151d5cc44ae *src/Makevars a998e830d7647683a856b25a4ae26ad1 *src/dgedi.f 0a954d67dd2bc16afd7fe901666b5108 *src/dgefa.f -e0d9c35a7d00def4fde0c37645c0df17 *src/ugee.c +3a96a9f74d77ad5a104bb30ca793a45e *src/ugee.c a8a359729843b27eb993a2db419e8519 *src/ugee.h 2c82e4417730e67a06163354867bc1bc *tests/Examples/gee-Ex.Rout.save 5b366661b020755d7f9d6e5387f1092f *tests/data_for_gee_binomial.RData diff -Nru r-cran-gee-4.13-19/src/ugee.c r-cran-gee-4.13-20/src/ugee.c --- r-cran-gee-4.13-19/src/ugee.c 2015-06-29 10:15:45.000000000 +0000 +++ r-cran-gee-4.13-20/src/ugee.c 2016-02-07 07:25:52.000000000 +0000 @@ -4,6 +4,7 @@ /* combines sources from the following v 4.9 files */ /* cgee.c chanmat.c clinluxxy.c diag_as_vec.c normlib.c */ +#include #include /* undefine duplicated macros */