RUN: /bin/echo ['echo', 'Forking build subprocess...'] Forking build subprocess... RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '6b5e6836a3642ee987fe0d48307e0dbc16b30c6e', '/home/buildd/filecache-default/42ee941dde44cf743650e4ee6c0bae8f8c2d8f81'] Synching the system clock with the buildd NTP service... 10 Apr 02:26:35 ntpdate[15769]: adjust time server 10.211.37.1 offset 0.000018 sec Unpacking chroot for build 6b5e6836a3642ee987fe0d48307e0dbc16b30c6e RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '6b5e6836a3642ee987fe0d48307e0dbc16b30c6e'] Mounting chroot for build 6b5e6836a3642ee987fe0d48307e0dbc16b30c6e RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '6b5e6836a3642ee987fe0d48307e0dbc16b30c6e', 'deb http://ftpmaster.internal/ubuntu natty main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu natty-security main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu natty-updates main restricted universe multiverse'] Overriding sources.list in build-6b5e6836a3642ee987fe0d48307e0dbc16b30c6e RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '6b5e6836a3642ee987fe0d48307e0dbc16b30c6e', 'armel'] Updating debian chroot for build 6b5e6836a3642ee987fe0d48307e0dbc16b30c6e Get:1 http://ftpmaster.internal natty Release.gpg [198 B] Ign http://ftpmaster.internal/ubuntu/ natty/main Translation-en Ign http://ftpmaster.internal/ubuntu/ natty/multiverse Translation-en Ign http://ftpmaster.internal/ubuntu/ natty/restricted Translation-en Ign http://ftpmaster.internal/ubuntu/ natty/universe Translation-en Get:2 http://ftpmaster.internal natty-security Release.gpg [198 B] Ign http://ftpmaster.internal/ubuntu/ natty-security/main Translation-en Ign http://ftpmaster.internal/ubuntu/ natty-security/multiverse Translation-en Ign http://ftpmaster.internal/ubuntu/ natty-security/restricted Translation-en Ign http://ftpmaster.internal/ubuntu/ natty-security/universe Translation-en Get:3 http://ftpmaster.internal natty-updates Release.gpg [198 B] Ign http://ftpmaster.internal/ubuntu/ natty-updates/main Translation-en Ign http://ftpmaster.internal/ubuntu/ natty-updates/multiverse Translation-en Ign http://ftpmaster.internal/ubuntu/ natty-updates/restricted Translation-en Ign http://ftpmaster.internal/ubuntu/ natty-updates/universe Translation-en Get:4 http://ftpmaster.internal natty Release [39.8 kB] Get:5 http://ftpmaster.internal natty-security Release [23.2 kB] Get:6 http://ftpmaster.internal natty-updates Release [23.2 kB] Get:7 http://ftpmaster.internal natty/main armel Packages [1535 kB] Get:8 http://ftpmaster.internal natty/restricted armel Packages [14 B] Get:9 http://ftpmaster.internal natty/universe armel Packages [5874 kB] Get:10 http://ftpmaster.internal natty/multiverse armel Packages [164 kB] Get:11 http://ftpmaster.internal natty-security/main armel Packages [14 B] Get:12 http://ftpmaster.internal natty-security/restricted armel Packages [14 B] Get:13 http://ftpmaster.internal natty-security/universe armel Packages [14 B] Get:14 http://ftpmaster.internal natty-security/multiverse armel Packages [14 B] Get:15 http://ftpmaster.internal natty-updates/main armel Packages [14 B] Get:16 http://ftpmaster.internal natty-updates/restricted armel Packages [14 B] Get:17 http://ftpmaster.internal natty-updates/universe armel Packages [14 B] Get:18 http://ftpmaster.internal natty-updates/multiverse armel Packages [14 B] Fetched 7660 kB in 30s (248 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libpam-modules-bin multiarch-support The following packages will be upgraded: adduser apt apt-transport-https base-files bash binutils bsdutils busybox-initramfs bzip2 coreutils cpio cpp cpp-4.5 debconf debconf-i18n dpkg dpkg-dev e2fslibs e2fsprogs findutils g++ g++-4.5 gcc gcc-4.5 gcc-4.5-base gnupg gpgv initramfs-tools initramfs-tools-bin initscripts klibc-utils libacl1 libattr1 libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcomerr2 libdb4.8 libdbus-1-3 libdpkg-perl libdrm-intel1 libdrm-nouveau1a libdrm-radeon1 libdrm2 libgcc1 libgcrypt11 libgdbm3 libglib2.0-0 libgmp3c2 libgmpxx4ldbl libgnutls26 libgomp1 libgpg-error0 libgssapi-krb5-2 libk5crypto3 libkeyutils1 libklibc libkrb5-3 libkrb5support0 libldap-2.4-2 libmpc2 libmpfr4 libnih-dbus1 libnih1 libpam-modules libpam-runtime libpam0g libpcre3 libplymouth2 libpng12-0 libreadline6 libselinux1 libss2 libssl0.9.8 libstdc++6 libstdc++6-4.5-dev libtasn1-3 libudev0 libusb-0.1-4 libuuid1 linux-libc-dev locales login make module-init-tools mount mountall netbase openssl passwd perl perl-base perl-modules pkg-create-dbgsym pkgbinarymangler plymouth procps python2.7-minimal readline-common sysv-rc sysvinit-utils tzdata udev upstart util-linux zlib1g 109 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 57.8 MB of archives. After this operation, 127 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libnih-dbus1 libnih1 libc6-dev libc-dev-bin libc-bin libc6 multiarch-support libdbus-1-3 linux-libc-dev libgomp1 gcc-4.5-base libgcc1 cpp-4.5 libstdc++6-4.5-dev g++-4.5 gcc-4.5 libstdc++6 libgmp3c2 libgmpxx4ldbl libmpfr4 libmpc2 zlib1g binutils debconf-i18n debconf tzdata libpam0g libselinux1 libpam-modules-bin libpam-modules base-files bash coreutils dpkg e2fslibs e2fsprogs findutils login mount perl-modules bzip2 libbz2-1.0 libdb4.8 libgdbm3 perl perl-base sysvinit-utils sysv-rc passwd initscripts libudev0 libattr1 libacl1 libpcre3 libglib2.0-0 libusb-0.1-4 module-init-tools initramfs-tools initramfs-tools-bin klibc-utils libklibc busybox-initramfs cpio procps adduser util-linux udev libdrm2 libdrm-intel1 libdrm-nouveau1a libdrm-radeon1 plymouth libpng12-0 libplymouth2 mountall upstart bsdutils libuuid1 libblkid1 libcomerr2 libss2 libgpg-error0 libgcrypt11 libtasn1-3 libgnutls26 libkeyutils1 libk5crypto3 libgssapi-krb5-2 libkrb5-3 libkrb5support0 apt libpam-runtime libssl0.9.8 python2.7-minimal readline-common libreadline6 gpgv gnupg netbase locales apt-transport-https libldap-2.4-2 openssl cpp dpkg-dev libdpkg-perl make gcc g++ pkg-create-dbgsym pkgbinarymangler Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ natty/main libnih-dbus1 armel 1.0.3-1ubuntu1 [13.4 kB] Get:2 http://ftpmaster.internal/ubuntu/ natty/main libnih1 armel 1.0.3-1ubuntu1 [46.9 kB] Get:3 http://ftpmaster.internal/ubuntu/ natty/main libc6-dev armel 2.13-0ubuntu12 [2334 kB] Get:4 http://ftpmaster.internal/ubuntu/ natty/main libc-dev-bin armel 2.13-0ubuntu12 [75.4 kB] Get:5 http://ftpmaster.internal/ubuntu/ natty/main libc-bin armel 2.13-0ubuntu12 [848 kB] Get:6 http://ftpmaster.internal/ubuntu/ natty/main libc6 armel 2.13-0ubuntu12 [3856 kB] Get:7 http://ftpmaster.internal/ubuntu/ natty/main multiarch-support armel 2.13-0ubuntu12 [8212 B] Get:8 http://ftpmaster.internal/ubuntu/ natty/main libdbus-1-3 armel 1.4.6-1ubuntu6 [111 kB] Get:9 http://ftpmaster.internal/ubuntu/ natty/main linux-libc-dev armel 2.6.38-8.41 [766 kB] Get:10 http://ftpmaster.internal/ubuntu/ natty/main libgomp1 armel 4.5.2-8ubuntu1 [21.5 kB] Get:11 http://ftpmaster.internal/ubuntu/ natty/main gcc-4.5-base armel 4.5.2-8ubuntu1 [14.5 kB] Get:12 http://ftpmaster.internal/ubuntu/ natty/main libgcc1 armel 1:4.5.2-8ubuntu1 [22.2 kB] Get:13 http://ftpmaster.internal/ubuntu/ natty/main cpp-4.5 armel 4.5.2-8ubuntu1 [3848 kB] Get:14 http://ftpmaster.internal/ubuntu/ natty/main libstdc++6-4.5-dev armel 4.5.2-8ubuntu1 [1623 kB] Get:15 http://ftpmaster.internal/ubuntu/ natty/main g++-4.5 armel 4.5.2-8ubuntu1 [4621 kB] Get:16 http://ftpmaster.internal/ubuntu/ natty/main gcc-4.5 armel 4.5.2-8ubuntu1 [4317 kB] Get:17 http://ftpmaster.internal/ubuntu/ natty/main libstdc++6 armel 4.5.2-8ubuntu1 [273 kB] Get:18 http://ftpmaster.internal/ubuntu/ natty/main libgmp3c2 armel 2:4.3.2+dfsg-1ubuntu3 [235 kB] Get:19 http://ftpmaster.internal/ubuntu/ natty/main libgmpxx4ldbl armel 2:4.3.2+dfsg-1ubuntu3 [9324 B] Get:20 http://ftpmaster.internal/ubuntu/ natty/main libmpfr4 armel 3.0.0-7 [169 kB] Get:21 http://ftpmaster.internal/ubuntu/ natty/main libmpc2 armel 0.9-1 [31.6 kB] Get:22 http://ftpmaster.internal/ubuntu/ natty/main zlib1g armel 1:1.2.3.4.dfsg-3ubuntu3 [48.7 kB] Get:23 http://ftpmaster.internal/ubuntu/ natty/main binutils armel 2.21.0.20110327-2ubuntu2 [2379 kB] Get:24 http://ftpmaster.internal/ubuntu/ natty/main debconf-i18n all 1.5.36ubuntu4 [208 kB] Get:25 http://ftpmaster.internal/ubuntu/ natty/main debconf all 1.5.36ubuntu4 [140 kB] Get:26 http://ftpmaster.internal/ubuntu/ natty/main tzdata all 2011e-1 [772 kB] Get:27 http://ftpmaster.internal/ubuntu/ natty/main libpam0g armel 1.1.2-2ubuntu7 [47.3 kB] Get:28 http://ftpmaster.internal/ubuntu/ natty/main libselinux1 armel 2.0.96-1ubuntu2 [54.6 kB] Get:29 http://ftpmaster.internal/ubuntu/ natty/main libpam-modules-bin armel 1.1.2-2ubuntu7 [41.4 kB] Get:30 http://ftpmaster.internal/ubuntu/ natty/main libpam-modules armel 1.1.2-2ubuntu7 [245 kB] Get:31 http://ftpmaster.internal/ubuntu/ natty/main base-files armel 5.0.0ubuntu27 [67.5 kB] Get:32 http://ftpmaster.internal/ubuntu/ natty/main bash armel 4.2-0ubuntu3 [524 kB] Get:33 http://ftpmaster.internal/ubuntu/ natty/main coreutils armel 8.5-1ubuntu6 [1746 kB] Get:34 http://ftpmaster.internal/ubuntu/ natty/main dpkg armel 1.16.0~ubuntu6 [1827 kB] Get:35 http://ftpmaster.internal/ubuntu/ natty/main e2fslibs armel 1.41.14-1ubuntu3 [130 kB] Get:36 http://ftpmaster.internal/ubuntu/ natty/main e2fsprogs armel 1.41.14-1ubuntu3 [810 kB] Get:37 http://ftpmaster.internal/ubuntu/ natty/main findutils armel 4.4.2-1ubuntu3 [291 kB] Get:38 http://ftpmaster.internal/ubuntu/ natty/main login armel 1:4.1.4.2+svn3283-3ubuntu1 [274 kB] Get:39 http://ftpmaster.internal/ubuntu/ natty/main mount armel 2.17.2-9.1ubuntu4 [122 kB] Get:40 http://ftpmaster.internal/ubuntu/ natty/main perl-modules all 5.10.1-17ubuntu4 [3442 kB] Get:41 http://ftpmaster.internal/ubuntu/ natty/main bzip2 armel 1.0.5-6ubuntu1 [36.1 kB] Get:42 http://ftpmaster.internal/ubuntu/ natty/main libbz2-1.0 armel 1.0.5-6ubuntu1 [33.6 kB] Get:43 http://ftpmaster.internal/ubuntu/ natty/main libdb4.8 armel 4.8.30-5ubuntu2 [585 kB] Get:44 http://ftpmaster.internal/ubuntu/ natty/main libgdbm3 armel 1.8.3-9ubuntu1 [31.7 kB] Get:45 http://ftpmaster.internal/ubuntu/ natty/main perl armel 5.10.1-17ubuntu4 [3701 kB] Get:46 http://ftpmaster.internal/ubuntu/ natty/main perl-base armel 5.10.1-17ubuntu4 [894 kB] Get:47 http://ftpmaster.internal/ubuntu/ natty/main sysvinit-utils armel 2.87dsf-4ubuntu23 [49.6 kB] Get:48 http://ftpmaster.internal/ubuntu/ natty/main sysv-rc all 2.87dsf-4ubuntu23 [36.4 kB] Get:49 http://ftpmaster.internal/ubuntu/ natty/main passwd armel 1:4.1.4.2+svn3283-3ubuntu1 [796 kB] Get:50 http://ftpmaster.internal/ubuntu/ natty/main initscripts armel 2.87dsf-4ubuntu23 [31.4 kB] Get:51 http://ftpmaster.internal/ubuntu/ natty/main libudev0 armel 167-0ubuntu3 [25.2 kB] Get:52 http://ftpmaster.internal/ubuntu/ natty/main libattr1 armel 1:2.4.44-2ubuntu2 [9776 B] Get:53 http://ftpmaster.internal/ubuntu/ natty/main libacl1 armel 2.2.49-4ubuntu2 [14.7 kB] Get:54 http://ftpmaster.internal/ubuntu/ natty/main libpcre3 armel 8.12-3ubuntu2 [148 kB] Get:55 http://ftpmaster.internal/ubuntu/ natty/main libglib2.0-0 armel 2.28.5-0ubuntu1 [947 kB] Get:56 http://ftpmaster.internal/ubuntu/ natty/main libusb-0.1-4 armel 2:0.1.12-17 [15.3 kB] Get:57 http://ftpmaster.internal/ubuntu/ natty/main module-init-tools armel 3.12-1ubuntu6 [83.0 kB] Get:58 http://ftpmaster.internal/ubuntu/ natty/main initramfs-tools all 0.98.8ubuntu3 [52.6 kB] Get:59 http://ftpmaster.internal/ubuntu/ natty/main initramfs-tools-bin armel 0.98.8ubuntu3 [10.9 kB] Get:60 http://ftpmaster.internal/ubuntu/ natty/main klibc-utils armel 1.5.20-1ubuntu4 [188 kB] Get:61 http://ftpmaster.internal/ubuntu/ natty/main libklibc armel 1.5.20-1ubuntu4 [46.8 kB] Get:62 http://ftpmaster.internal/ubuntu/ natty/main busybox-initramfs armel 1:1.17.1-10ubuntu1 [146 kB] Get:63 http://ftpmaster.internal/ubuntu/ natty/main cpio armel 2.11-7ubuntu1 [99.5 kB] Get:64 http://ftpmaster.internal/ubuntu/ natty/main procps armel 1:3.2.8-10ubuntu3 [226 kB] Get:65 http://ftpmaster.internal/ubuntu/ natty/main adduser all 3.112+nmu1ubuntu5 [99.3 kB] Get:66 http://ftpmaster.internal/ubuntu/ natty/main util-linux armel 2.17.2-9.1ubuntu4 [494 kB] Get:67 http://ftpmaster.internal/ubuntu/ natty/main udev armel 167-0ubuntu3 [365 kB] Get:68 http://ftpmaster.internal/ubuntu/ natty/main libdrm2 armel 2.4.23-1ubuntu6 [20.8 kB] Get:69 http://ftpmaster.internal/ubuntu/ natty/main libdrm-intel1 armel 2.4.23-1ubuntu6 [22.4 kB] Get:70 http://ftpmaster.internal/ubuntu/ natty/main libdrm-nouveau1a armel 2.4.23-1ubuntu6 [12.8 kB] Get:71 http://ftpmaster.internal/ubuntu/ natty/main libdrm-radeon1 armel 2.4.23-1ubuntu6 [13.6 kB] Get:72 http://ftpmaster.internal/ubuntu/ natty/main plymouth armel 0.8.2-2ubuntu21 [102 kB] Get:73 http://ftpmaster.internal/ubuntu/ natty/main libpng12-0 armel 1.2.44-1ubuntu3 [118 kB] Get:74 http://ftpmaster.internal/ubuntu/ natty/main libplymouth2 armel 0.8.2-2ubuntu21 [72.2 kB] Get:75 http://ftpmaster.internal/ubuntu/ natty/main mountall armel 2.25 [48.0 kB] Get:76 http://ftpmaster.internal/ubuntu/ natty/main upstart armel 0.9.4-1ubuntu1 [279 kB] Get:77 http://ftpmaster.internal/ubuntu/ natty/main bsdutils armel 1:2.17.2-9.1ubuntu4 [32.1 kB] Get:78 http://ftpmaster.internal/ubuntu/ natty/main libuuid1 armel 2.17.2-9.1ubuntu4 [13.2 kB] Get:79 http://ftpmaster.internal/ubuntu/ natty/main libblkid1 armel 2.17.2-9.1ubuntu4 [57.1 kB] Get:80 http://ftpmaster.internal/ubuntu/ natty/main libcomerr2 armel 1.41.14-1ubuntu3 [52.4 kB] Get:81 http://ftpmaster.internal/ubuntu/ natty/main libss2 armel 1.41.14-1ubuntu3 [56.5 kB] Get:82 http://ftpmaster.internal/ubuntu/ natty/main libgpg-error0 armel 1.10-0.2ubuntu1 [14.0 kB] Get:83 http://ftpmaster.internal/ubuntu/ natty/main libgcrypt11 armel 1.4.6-4ubuntu2 [263 kB] Get:84 http://ftpmaster.internal/ubuntu/ natty/main libtasn1-3 armel 2.7-1ubuntu1 [37.3 kB] Get:85 http://ftpmaster.internal/ubuntu/ natty/main libgnutls26 armel 2.8.6-1ubuntu2 [357 kB] Get:86 http://ftpmaster.internal/ubuntu/ natty/main libkeyutils1 armel 1.4-4ubuntu2 [6056 B] Get:87 http://ftpmaster.internal/ubuntu/ natty/main libk5crypto3 armel 1.8.3+dfsg-5ubuntu2 [82.2 kB] Get:88 http://ftpmaster.internal/ubuntu/ natty/main libgssapi-krb5-2 armel 1.8.3+dfsg-5ubuntu2 [88.0 kB] Get:89 http://ftpmaster.internal/ubuntu/ natty/main libkrb5-3 armel 1.8.3+dfsg-5ubuntu2 [289 kB] Get:90 http://ftpmaster.internal/ubuntu/ natty/main libkrb5support0 armel 1.8.3+dfsg-5ubuntu2 [21.1 kB] Get:91 http://ftpmaster.internal/ubuntu/ natty/main apt armel 0.8.13.2ubuntu2 [2009 kB] Get:92 http://ftpmaster.internal/ubuntu/ natty/main libpam-runtime all 1.1.2-2ubuntu7 [42.7 kB] Get:93 http://ftpmaster.internal/ubuntu/ natty/main libssl0.9.8 armel 0.9.8o-5ubuntu1 [680 kB] Get:94 http://ftpmaster.internal/ubuntu/ natty/main python2.7-minimal armel 2.7.1-5ubuntu1 [1492 kB] Get:95 http://ftpmaster.internal/ubuntu/ natty/main readline-common all 6.2-0ubuntu1 [49.8 kB] Get:96 http://ftpmaster.internal/ubuntu/ natty/main libreadline6 armel 6.2-0ubuntu1 [112 kB] Get:97 http://ftpmaster.internal/ubuntu/ natty/main gpgv armel 1.4.11-3ubuntu1 [155 kB] Get:98 http://ftpmaster.internal/ubuntu/ natty/main gnupg armel 1.4.11-3ubuntu1 [725 kB] Get:99 http://ftpmaster.internal/ubuntu/ natty/main netbase all 4.45ubuntu1 [14.8 kB] Get:100 http://ftpmaster.internal/ubuntu/ natty/main locales all 2.13+git20100825-4 [3496 kB] Get:101 http://ftpmaster.internal/ubuntu/ natty/main apt-transport-https armel 0.8.13.2ubuntu2 [17.7 kB] Get:102 http://ftpmaster.internal/ubuntu/ natty/main libldap-2.4-2 armel 2.4.23-6ubuntu6 [147 kB] Get:103 http://ftpmaster.internal/ubuntu/ natty/main openssl armel 0.9.8o-5ubuntu1 [391 kB] Get:104 http://ftpmaster.internal/ubuntu/ natty/main cpp armel 4:4.5.2-1ubuntu1 [27.8 kB] Get:105 http://ftpmaster.internal/ubuntu/ natty/main dpkg-dev all 1.16.0~ubuntu6 [476 kB] Get:106 http://ftpmaster.internal/ubuntu/ natty/main libdpkg-perl all 1.16.0~ubuntu6 [183 kB] Get:107 http://ftpmaster.internal/ubuntu/ natty/main make armel 3.81-8ubuntu1 [105 kB] Get:108 http://ftpmaster.internal/ubuntu/ natty/main gcc armel 4:4.5.2-1ubuntu1 [5066 B] Get:109 http://ftpmaster.internal/ubuntu/ natty/main g++ armel 4:4.5.2-1ubuntu1 [1436 B] Get:110 http://ftpmaster.internal/ubuntu/ natty/main pkg-create-dbgsym all 0.48 [8096 B] Get:111 http://ftpmaster.internal/ubuntu/ natty/main pkgbinarymangler all 95 [23.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 57.8 MB in 13s (4278 kB/s) (Reading database ... 13527 files and directories currently installed.) Preparing to replace libnih-dbus1 1.0.3-1 (using .../libnih-dbus1_1.0.3-1ubuntu1_armel.deb) ... Unpacking replacement libnih-dbus1 ... Preparing to replace libnih1 1.0.3-1 (using .../libnih1_1.0.3-1ubuntu1_armel.deb) ... Unpacking replacement libnih1 ... Preparing to replace libc6-dev 2.12.1-0ubuntu14 (using .../libc6-dev_2.13-0ubuntu12_armel.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libc-dev-bin 2.12.1-0ubuntu14 (using .../libc-dev-bin_2.13-0ubuntu12_armel.deb) ... Unpacking replacement libc-dev-bin ... Preparing to replace libc-bin 2.12.1-0ubuntu14 (using .../libc-bin_2.13-0ubuntu12_armel.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.13-0ubuntu12) ... (Reading database ... 13550 files and directories currently installed.) Preparing to replace libc6 2.12.1-0ubuntu14 (using .../libc6_2.13-0ubuntu12_armel.deb) ... Checking for services that may need to be restarted... Checking init scripts... Unpacking replacement libc6 ... Setting up libc6 (2.13-0ubuntu12) ... Checking for services that may need to be restarted... Checking init scripts... Nothing to restart. Processing triggers for libc-bin ... ldconfig deferred processing now taking place Selecting previously deselected package multiarch-support. (Reading database ... 13551 files and directories currently installed.) Unpacking multiarch-support (from .../multiarch-support_2.13-0ubuntu12_armel.deb) ... Setting up multiarch-support (2.13-0ubuntu12) ... (Reading database ... 13554 files and directories currently installed.) Preparing to replace libdbus-1-3 1.4.1-0ubuntu2 (using .../libdbus-1-3_1.4.6-1ubuntu6_armel.deb) ... Unpacking replacement libdbus-1-3 ... Preparing to replace linux-libc-dev 2.6.38-1.28 (using .../linux-libc-dev_2.6.38-8.41_armel.deb) ... Unpacking replacement linux-libc-dev ... Preparing to replace libgomp1 4.5.2-2ubuntu1 (using .../libgomp1_4.5.2-8ubuntu1_armel.deb) ... Unpacking replacement libgomp1 ... Preparing to replace gcc-4.5-base 4.5.2-2ubuntu1 (using .../gcc-4.5-base_4.5.2-8ubuntu1_armel.deb) ... Unpacking replacement gcc-4.5-base ... Setting up gcc-4.5-base (4.5.2-8ubuntu1) ... (Reading database ... 13562 files and directories currently installed.) Preparing to replace libgcc1 1:4.5.2-2ubuntu1 (using .../libgcc1_1%3a4.5.2-8ubuntu1_armel.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (1:4.5.2-8ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 13562 files and directories currently installed.) Preparing to replace cpp-4.5 4.5.2-2ubuntu1 (using .../cpp-4.5_4.5.2-8ubuntu1_armel.deb) ... Unpacking replacement cpp-4.5 ... Preparing to replace libstdc++6-4.5-dev 4.5.2-2ubuntu1 (using .../libstdc++6-4.5-dev_4.5.2-8ubuntu1_armel.deb) ... Unpacking replacement libstdc++6-4.5-dev ... Preparing to replace g++-4.5 4.5.2-2ubuntu1 (using .../g++-4.5_4.5.2-8ubuntu1_armel.deb) ... Unpacking replacement g++-4.5 ... Preparing to replace gcc-4.5 4.5.2-2ubuntu1 (using .../gcc-4.5_4.5.2-8ubuntu1_armel.deb) ... Unpacking replacement gcc-4.5 ... Preparing to replace libstdc++6 4.5.2-2ubuntu1 (using .../libstdc++6_4.5.2-8ubuntu1_armel.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.5.2-8ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 13559 files and directories currently installed.) Preparing to replace libgmp3c2 2:4.3.2+dfsg-1ubuntu1 (using .../libgmp3c2_2%3a4.3.2+dfsg-1ubuntu3_armel.deb) ... Unpacking replacement libgmp3c2 ... Preparing to replace libgmpxx4ldbl 2:4.3.2+dfsg-1ubuntu1 (using .../libgmpxx4ldbl_2%3a4.3.2+dfsg-1ubuntu3_armel.deb) ... Unpacking replacement libgmpxx4ldbl ... Preparing to replace libmpfr4 3.0.0-2build1 (using .../libmpfr4_3.0.0-7_armel.deb) ... Unpacking replacement libmpfr4 ... 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Setting up initramfs-tools-bin (0.98.8ubuntu3) ... Setting up libklibc (1.5.20-1ubuntu4) ... Setting up klibc-utils (1.5.20-1ubuntu4) ... Setting up busybox-initramfs (1:1.17.1-10ubuntu1) ... Setting up cpio (2.11-7ubuntu1) ... Setting up adduser (3.112+nmu1ubuntu5) ... Setting up libdrm2 (2.4.23-1ubuntu6) ... Setting up libdrm-intel1 (2.4.23-1ubuntu6) ... Setting up libdrm-nouveau1a (2.4.23-1ubuntu6) ... Setting up libdrm-radeon1 (2.4.23-1ubuntu6) ... Setting up libpng12-0 (1.2.44-1ubuntu3) ... Setting up libplymouth2 (0.8.2-2ubuntu21) ... Setting up libgpg-error0 (1.10-0.2ubuntu1) ... Setting up libgcrypt11 (1.4.6-4ubuntu2) ... Setting up libtasn1-3 (2.7-1ubuntu1) ... Setting up libgnutls26 (2.8.6-1ubuntu2) ... Setting up libkeyutils1 (1.4-4ubuntu2) ... Setting up libkrb5support0 (1.8.3+dfsg-5ubuntu2) ... Setting up libk5crypto3 (1.8.3+dfsg-5ubuntu2) ... Setting up libkrb5-3 (1.8.3+dfsg-5ubuntu2) ... Setting up libgssapi-krb5-2 (1.8.3+dfsg-5ubuntu2) ... Setting up readline-common (6.2-0ubuntu1) ... Setting up libreadline6 (6.2-0ubuntu1) ... Setting up gpgv (1.4.11-3ubuntu1) ... Setting up gnupg (1.4.11-3ubuntu1) ... Setting up locales (2.13+git20100825-4) ... Setting up apt-transport-https (0.8.13.2ubuntu2) ... Setting up libldap-2.4-2 (2.4.23-6ubuntu6) ... Setting up openssl (0.9.8o-5ubuntu1) ... Setting up cpp (4:4.5.2-1ubuntu1) ... Setting up make (3.81-8ubuntu1) ... Setting up gcc (4:4.5.2-1ubuntu1) ... Setting up pkg-create-dbgsym (0.48) ... Setting up pkgbinarymangler (95) ... Setting up libstdc++6-4.5-dev (4.5.2-8ubuntu1) ... Setting up perl-modules (5.10.1-17ubuntu4) ... Setting up mountall (2.25) ... Installing new version of config file /etc/init/mounted-tmp.conf ... Setting up upstart (0.9.4-1ubuntu1) ... Installing new version of config file /etc/init/rc-sysinit.conf ... Installing new version of config file /etc/init/upstart-udev-bridge.conf ... Setting up initscripts (2.87dsf-4ubuntu23) ... Installing new version of config file /etc/init.d/sendsigs ... Installing new version of config file /etc/init.d/umountnfs.sh ... Installing new version of config file /etc/init.d/umountroot ... Setting up netbase (4.45ubuntu1) ... Installing new version of config file /etc/protocols ... Installing new version of config file /etc/services ... Setting up g++-4.5 (4.5.2-8ubuntu1) ... Setting up perl (5.10.1-17ubuntu4) ... Setting up module-init-tools (3.12-1ubuntu6) ... Installing new version of config file /etc/modprobe.d/blacklist-framebuffer.conf ... Removing obsolete conffile /etc/modprobe.d/intel-5300-iwlagn-disable11n.conf ... Setting up initramfs-tools (0.98.8ubuntu3) ... update-initramfs: deferring update (trigger activated) Setting up procps (1:3.2.8-10ubuntu3) ... Setting up udev (167-0ubuntu3) ... Removing 'diversion of /sbin/udevadm to /sbin/udevadm.upgrade by fake-udev' update-initramfs: deferring update (trigger activated) Setting up plymouth (0.8.2-2ubuntu21) ... Installing new version of config file /etc/init/plymouth-splash.conf ... update-initramfs: deferring update (trigger activated) Setting up libdpkg-perl (1.16.0~ubuntu6) ... Setting up dpkg-dev (1.16.0~ubuntu6) ... Setting up g++ (4:4.5.2-1ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Processing triggers for initramfs-tools ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '6b5e6836a3642ee987fe0d48307e0dbc16b30c6e', 'armel', 'natty', '--nolog', '--batch', '--archive=ubuntu', '--dist=natty', '--purpose=COPY', '--architecture=armel', '--comp=universe', 'ball_1.3.2-2ubuntu3.dsc'] Initiating build 6b5e6836a3642ee987fe0d48307e0dbc16b30c6e with 0 processor cores. Automatic build of ball_1.3.2-2ubuntu3 on hubbard by sbuild/armel 1.170.5 Build started at 20110410-0232 ****************************************************************************** ball_1.3.2-2ubuntu3.dsc exists in cwd sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 5), libqt4-dev, libqt4-gui, libqt4-opengl, libqt4-opengl-dev, libqt4-sql, libqt4-network, python-sip-dev (>= 4.8.2), flex, bison, cmake, libglew1.5-dev | libglew-dev, libfftw3-dev, libgsl0-dev, python-dev (>= 2.4), libxrender-dev, libboost-dev, libboost-iostreams-dev, libboost-thread-dev, libboost-math-dev | libboost-dev (<< 1.37), libboost-system-dev | libboost-dev (<< 1.37), libasio-dev, libboost-regex-dev, libxmu-dev, doxygen, tidy, texlive-base, texlive-latex-recommended, texlive-fonts-recommended, gs-common, texlive-latex-extra, graphviz, chrpath, python-support (>= 0.90.0) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) Checking for already installed source dependencies... debhelper: missing libqt4-dev: missing libqt4-gui: missing libqt4-opengl: missing libqt4-opengl-dev: missing libqt4-sql: missing libqt4-network: missing python-sip-dev: missing flex: missing bison: missing cmake: missing libglew1.5-dev: missing libglew-dev: missing libfftw3-dev: missing libgsl0-dev: missing python-dev: missing libxrender-dev: missing libboost-dev: missing libboost-iostreams-dev: missing libboost-thread-dev: missing libboost-math-dev: missing libboost-dev: missing libboost-system-dev: missing libboost-dev: missing libasio-dev: missing libboost-regex-dev: missing libxmu-dev: missing doxygen: missing tidy: missing texlive-base: missing texlive-latex-recommended: missing texlive-fonts-recommended: missing gs-common: missing texlive-latex-extra: missing graphviz: missing chrpath: missing python-support: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper libqt4-dev libqt4-gui libqt4-opengl libqt4-opengl-dev libqt4-sql libqt4-network python-sip-dev flex bison cmake libglew1.5-dev libfftw3-dev libgsl0-dev python-dev libxrender-dev libboost-dev libboost-iostreams-dev libboost-thread-dev libboost-math-dev libboost-system-dev libasio-dev libboost-regex-dev libxmu-dev doxygen tidy texlive-base texlive-latex-recommended texlive-fonts-recommended gs-common texlive-latex-extra graphviz chrpath python-support Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bsdmainutils cmake-data doxygen-latex ed emacsen-common file fontconfig fontconfig-config gettext gettext-base ghostscript groff-base gs-cjk-resource gsfonts html2text intltool-debian latex-xcolor libarchive1 libaudio2 libavahi-client3 libavahi-common-data libavahi-common3 libboost-date-time-dev libboost-date-time1.42-dev libboost-date-time1.42.0 libboost-iostreams1.42-dev libboost-iostreams1.42.0 libboost-math1.42-dev libboost-math1.42.0 libboost-regex1.42-dev libboost-regex1.42.0 libboost-serialization1.42-dev libboost-serialization1.42.0 libboost-system1.42-dev libboost-system1.42.0 libboost-thread1.42-dev libboost-thread1.42.0 libboost1.42-dev libcairo2 libcdt4 libcgraph5 libcroco3 libcups2 libcupsimage2 libcurl3 libdatrie1 libdrm-dev libegl1-mesa libegl1-mesa-dev libexpat1 libexpat1-dev libfftw3-3 libfontconfig1 libfreetype6 libgd2-noxpm libgl1-mesa-dev libgl1-mesa-glx libgles2-mesa libgles2-mesa-dev libglew1.5 libglu1-mesa libglu1-mesa-dev libgraph4 libgs9 libgs9-common libgsl0ldbl libgvc5 libgvpr1 libice-dev libice6 libicu-dev libicu44 libijs-0.35 libjasper1 libjbig2dec0 libjpeg62 libjs-jquery libkms1 libkpathsea5 liblcms1 libmagic1 libmng1 libpango1.0-0 libpaper1 libpathplan4 libpipeline1 libpixman-1-0 libpoppler12 libpthread-stubs0 libpthread-stubs0-dev libpython2.7 libqt4-dbus libqt4-declarative libqt4-designer libqt4-help libqt4-qt3support libqt4-script libqt4-scripttools libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtgui4 libsm-dev libsm6 libsqlite3-0 libssl-dev libthai-data libthai0 libtidy-0.99-0 libtiff4 libunistring0 libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxaw7 libxcb-dri2-0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft2 libxi6 libxml2 libxmlrpc-core-c3-0 libxmu-headers libxmu6 libxpm4 libxrender1 libxt-dev libxt6 libxxf86vm-dev libxxf86vm1 luatex m4 man-db mesa-common-dev mime-support po-debconf preview-latex-style python python-sip python2.7 python2.7-dev qt4-qmake tex-common texlive-binaries texlive-common texlive-doc-base texlive-extra-utils texlive-latex-base texlive-pictures ttf-dejavu-core ucf x11-common x11proto-core-dev x11proto-damage-dev x11proto-dri2-dev x11proto-fixes-dev x11proto-gl-dev x11proto-input-dev x11proto-kb-dev x11proto-render-dev x11proto-xext-dev x11proto-xf86vidmode-dev xtrans-dev zlib1g-dev Suggested packages: bison-doc wamerican wordlist whois vacation dh-make doxygen-doc doxygen-gui defoma gettext-doc ghostscript-x ghostscript-cups hpijs graphviz-doc groff ttf-sazanami-mincho ttf-sazanami-gothic ttf-arphic-ukai ttf-arphic-uming ttf-unfonts-core nas libboost1.42-doc libboost-filesystem1.42-dev libboost-graph1.42-dev libboost-program-options1.42-dev libboost-python1.42-dev libboost-signals1.42-dev libboost-test1.42-dev libboost-wave1.42-dev xsltproc docbook-xml docbook-xsl default-jdk fop cups-common libgd-tools glew-utils gsl-ref-psdoc gsl-doc-pdf gsl-doc-info gsl-ref-html icu-doc libjasper-runtime javascript-common liblcms-utils ttf-japanese-gothic ttf-japanese-mincho ttf-thryomanes ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp qt4-dev-tools qt4-doc libmysqlclient-dev libsqlite0-dev libsqlite3-dev libpq-dev unixodbc-dev qt4-qtconfig less www-browser libmail-box-perl python-doc python-tk python-profiler python2.7-doc python2.7-profiler perl-tk xpdf-reader pdf-viewer gv postscript-viewer dvidvi fragmaster latexmk purifyeps xindy texpower tidy-doc Recommended packages: curl wget lynx-cur ttf-liberation cmap-adobe-japan1 cmap-adobe-cns1 cmap-adobe-gb1 cmap-adobe-korea1 cmap-adobe-japan2 libegl1-mesa-drivers libgl1-mesa-dri x-ttcidfont-conf libpaper-utils libqtwebkit-dev libqt4-sql-mysql libqt4-sql-odbc libqt4-sql-psql libqt4-sql-sqlite libqt4-sql-sqlite2 appmenu-qt xml-core texlive-luatex libmail-sendmail-perl doc-base lmodern lacheck texlive-fonts-recommended-doc tipa texlive-latex-base-doc texlive-latex-extra-doc texlive-latex-recommended-doc prosper latex-beamer texlive-pictures-doc pgf The following NEW packages will be installed: bison bsdmainutils chrpath cmake cmake-data debhelper doxygen doxygen-latex ed emacsen-common file flex fontconfig fontconfig-config gettext gettext-base ghostscript graphviz groff-base gs-cjk-resource gs-common gsfonts html2text intltool-debian latex-xcolor libarchive1 libasio-dev libaudio2 libavahi-client3 libavahi-common-data libavahi-common3 libboost-date-time-dev libboost-date-time1.42-dev libboost-date-time1.42.0 libboost-dev libboost-iostreams-dev libboost-iostreams1.42-dev libboost-iostreams1.42.0 libboost-math-dev libboost-math1.42-dev libboost-math1.42.0 libboost-regex-dev libboost-regex1.42-dev libboost-regex1.42.0 libboost-serialization1.42-dev libboost-serialization1.42.0 libboost-system-dev libboost-system1.42-dev libboost-system1.42.0 libboost-thread-dev libboost-thread1.42-dev libboost-thread1.42.0 libboost1.42-dev libcairo2 libcdt4 libcgraph5 libcroco3 libcups2 libcupsimage2 libcurl3 libdatrie1 libdrm-dev libegl1-mesa libegl1-mesa-dev libexpat1 libexpat1-dev libfftw3-3 libfftw3-dev libfontconfig1 libfreetype6 libgd2-noxpm libgl1-mesa-dev libgl1-mesa-glx libgles2-mesa libgles2-mesa-dev libglew1.5 libglew1.5-dev libglu1-mesa libglu1-mesa-dev libgraph4 libgs9 libgs9-common libgsl0-dev libgsl0ldbl libgvc5 libgvpr1 libice-dev libice6 libicu-dev libicu44 libijs-0.35 libjasper1 libjbig2dec0 libjpeg62 libjs-jquery libkms1 libkpathsea5 liblcms1 libmagic1 libmng1 libpango1.0-0 libpaper1 libpathplan4 libpipeline1 libpixman-1-0 libpoppler12 libpthread-stubs0 libpthread-stubs0-dev libpython2.7 libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-gui libqt4-help libqt4-network libqt4-opengl libqt4-opengl-dev libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtgui4 libsm-dev libsm6 libsqlite3-0 libssl-dev libthai-data libthai0 libtidy-0.99-0 libtiff4 libunistring0 libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxaw7 libxcb-dri2-0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft2 libxi6 libxml2 libxmlrpc-core-c3-0 libxmu-dev libxmu-headers libxmu6 libxpm4 libxrender-dev libxrender1 libxt-dev libxt6 libxxf86vm-dev libxxf86vm1 luatex m4 man-db mesa-common-dev mime-support po-debconf preview-latex-style python python-dev python-sip python-sip-dev python-support python2.7 python2.7-dev qt4-qmake tex-common texlive-base texlive-binaries texlive-common texlive-doc-base texlive-extra-utils texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures tidy ttf-dejavu-core ucf x11-common x11proto-core-dev x11proto-damage-dev x11proto-dri2-dev x11proto-fixes-dev x11proto-gl-dev x11proto-input-dev x11proto-kb-dev x11proto-render-dev x11proto-xext-dev x11proto-xf86vidmode-dev xtrans-dev zlib1g-dev 0 upgraded, 215 newly installed, 0 to remove and 0 not upgraded. Need to get 153 MB of archives. After this operation, 506 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libexpat1 libsqlite3-0 libfreetype6 ucf ttf-dejavu-core fontconfig-config libfontconfig1 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6 libxcb-render0 libxcb-shm0 libxext6 libxrender1 m4 flex libavahi-common-data libavahi-common3 libavahi-client3 x11-common libice6 x11proto-core-dev libice-dev libkms1 libpixman-1-0 libcairo2 libdatrie1 libthai-data libthai0 libxft2 fontconfig libpango1.0-0 libsm6 libjpeg62 libtiff4 libx11-xcb1 libxcb-dri2-0 libxcb-shape0 libxcb-xfixes0 libxfixes3 libxdamage1 libxi6 libxau-dev libxdmcp-dev x11proto-input-dev x11proto-kb-dev xtrans-dev libpthread-stubs0 libpthread-stubs0-dev libxcb1-dev libx11-dev libxmu-headers libxt6 libxxf86vm1 x11proto-dri2-dev libmagic1 file mime-support python2.7 python bsdmainutils ed gettext-base groff-base libpipeline1 libpython2.7 libxml2 man-db python-support bison chrpath libarchive1 libcurl3 libxmlrpc-core-c3-0 emacsen-common cmake-data cmake html2text libcroco3 libunistring0 gettext intltool-debian po-debconf debhelper tex-common texlive-common texlive-doc-base liblcms1 libpoppler12 luatex libkpathsea5 libxmu6 libxpm4 libxaw7 texlive-binaries texlive-base texlive-extra-utils preview-latex-style texlive-pictures texlive-latex-base texlive-latex-extra texlive-latex-recommended latex-xcolor doxygen-latex doxygen libcups2 libcupsimage2 libijs-0.35 libjasper1 libjbig2dec0 libpaper1 libgs9-common gs-cjk-resource libgs9 gsfonts ghostscript libcdt4 libcgraph5 libgd2-noxpm libgraph4 libpathplan4 libgvc5 libgvpr1 graphviz gs-common libicu44 libboost1.42-dev libboost-dev libboost-date-time1.42.0 libboost-serialization1.42.0 libboost-serialization1.42-dev libboost-date-time1.42-dev libboost-date-time-dev libasio-dev libaudio2 libboost-regex1.42.0 libicu-dev libboost-regex1.42-dev libboost-iostreams1.42.0 libboost-iostreams1.42-dev libboost-iostreams-dev libboost-math1.42.0 libboost-math1.42-dev libboost-math-dev libboost-regex-dev libboost-system1.42.0 libboost-system1.42-dev libboost-system-dev libboost-thread1.42.0 libboost-thread1.42-dev libboost-thread-dev libdrm-dev libgl1-mesa-glx libegl1-mesa x11proto-gl-dev x11proto-xext-dev libxext-dev x11proto-xf86vidmode-dev libxxf86vm-dev x11proto-fixes-dev libxfixes-dev x11proto-damage-dev libxdamage-dev libegl1-mesa-dev libexpat1-dev libfftw3-3 libfftw3-dev libgles2-mesa libgles2-mesa-dev libglew1.5 mesa-common-dev libgl1-mesa-dev libglu1-mesa libglu1-mesa-dev libglew1.5-dev libgsl0ldbl libgsl0-dev libjs-jquery libmng1 libqtcore4 libqt4-xml libqt4-dbus libqt4-network libqt4-script libqt4-sql libqt4-xmlpatterns libqtgui4 libqt4-declarative libqt4-designer libqt4-qt3support libqt4-svg libqt4-scripttools libqt4-help libqt4-test qt4-qmake libqt4-dev libqt4-opengl libqt4-gui libqt4-opengl-dev libsm-dev zlib1g-dev libssl-dev libtidy-0.99-0 libxt-dev libxmu-dev x11proto-render-dev libxrender-dev python2.7-dev python-dev python-sip python-sip-dev texlive-fonts-recommended tidy Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ natty/main libexpat1 armel 2.0.1-7ubuntu3 [103 kB] Get:2 http://ftpmaster.internal/ubuntu/ natty/main libsqlite3-0 armel 3.7.4-2ubuntu5 [270 kB] Get:3 http://ftpmaster.internal/ubuntu/ natty/main libfreetype6 armel 2.4.4-1ubuntu2 [270 kB] Get:4 http://ftpmaster.internal/ubuntu/ natty/main ucf all 3.0025+nmu1ubuntu1 [54.3 kB] Get:5 http://ftpmaster.internal/ubuntu/ natty/main ttf-dejavu-core all 2.31-1 [1450 kB] Get:6 http://ftpmaster.internal/ubuntu/ natty/main fontconfig-config all 2.8.0-2.1ubuntu3 [44.5 kB] Get:7 http://ftpmaster.internal/ubuntu/ natty/main libfontconfig1 armel 2.8.0-2.1ubuntu3 [108 kB] Get:8 http://ftpmaster.internal/ubuntu/ natty/main libxau6 armel 1:1.0.6-1ubuntu1 [7180 B] Get:9 http://ftpmaster.internal/ubuntu/ natty/main libxdmcp6 armel 1:1.1.0-1ubuntu1 [10.9 kB] Get:10 http://ftpmaster.internal/ubuntu/ natty/main libxcb1 armel 1.7-2ubuntu2 [33.5 kB] Get:11 http://ftpmaster.internal/ubuntu/ natty/main libx11-data all 2:1.4.2-1ubuntu3 [169 kB] Get:12 http://ftpmaster.internal/ubuntu/ natty/main libx11-6 armel 2:1.4.2-1ubuntu3 [687 kB] Get:13 http://ftpmaster.internal/ubuntu/ natty/main libxcb-render0 armel 1.7-2ubuntu2 [11.8 kB] Get:14 http://ftpmaster.internal/ubuntu/ natty/main libxcb-shm0 armel 1.7-2ubuntu2 [6420 B] Get:15 http://ftpmaster.internal/ubuntu/ natty/main libxext6 armel 2:1.2.0-2ubuntu1 [27.2 kB] Get:16 http://ftpmaster.internal/ubuntu/ natty/main libxrender1 armel 1:0.9.6-1ubuntu1 [16.7 kB] Get:17 http://ftpmaster.internal/ubuntu/ natty/main m4 armel 1.4.14-3 [266 kB] Get:18 http://ftpmaster.internal/ubuntu/ natty/main flex armel 2.5.35-10ubuntu1 [237 kB] Get:19 http://ftpmaster.internal/ubuntu/ natty/main libavahi-common-data armel 0.6.30-0ubuntu2 [21.7 kB] Get:20 http://ftpmaster.internal/ubuntu/ natty/main libavahi-common3 armel 0.6.30-0ubuntu2 [36.5 kB] Get:21 http://ftpmaster.internal/ubuntu/ natty/main libavahi-client3 armel 0.6.30-0ubuntu2 [39.4 kB] Get:22 http://ftpmaster.internal/ubuntu/ natty/main x11-common all 1:7.6+4ubuntu3 [69.2 kB] Get:23 http://ftpmaster.internal/ubuntu/ natty/main libice6 armel 2:1.0.7-1ubuntu1 [38.1 kB] Get:24 http://ftpmaster.internal/ubuntu/ natty/main x11proto-core-dev all 7.0.20-1 [294 kB] Get:25 http://ftpmaster.internal/ubuntu/ natty/main libice-dev armel 2:1.0.7-1ubuntu1 [126 kB] Get:26 http://ftpmaster.internal/ubuntu/ natty/main libkms1 armel 2.4.23-1ubuntu6 [8300 B] Get:27 http://ftpmaster.internal/ubuntu/ natty/main libpixman-1-0 armel 0.20.2-0ubuntu1 [176 kB] Get:28 http://ftpmaster.internal/ubuntu/ natty/main libcairo2 armel 1.10.2-2ubuntu2 [401 kB] Get:29 http://ftpmaster.internal/ubuntu/ natty/main libdatrie1 armel 0.2.4-1 [23.8 kB] Get:30 http://ftpmaster.internal/ubuntu/ natty/main libthai-data all 0.1.14-2ubuntu1 [175 kB] Get:31 http://ftpmaster.internal/ubuntu/ natty/main libthai0 armel 0.1.14-2ubuntu1 [15.3 kB] Get:32 http://ftpmaster.internal/ubuntu/ natty/main libxft2 armel 2.2.0-2ubuntu2 [34.0 kB] Get:33 http://ftpmaster.internal/ubuntu/ natty/main fontconfig armel 2.8.0-2.1ubuntu3 [157 kB] Get:34 http://ftpmaster.internal/ubuntu/ natty/main libpango1.0-0 armel 1.28.4-0ubuntu1 [306 kB] Get:35 http://ftpmaster.internal/ubuntu/ natty/main libsm6 armel 2:1.2.0-1ubuntu1 [15.1 kB] Get:36 http://ftpmaster.internal/ubuntu/ natty/main libjpeg62 armel 6b1-1ubuntu1 [72.2 kB] Get:37 http://ftpmaster.internal/ubuntu/ natty/main libtiff4 armel 3.9.4-5ubuntu5 [122 kB] Get:38 http://ftpmaster.internal/ubuntu/ natty/main libx11-xcb1 armel 2:1.4.2-1ubuntu3 [10.7 kB] Get:39 http://ftpmaster.internal/ubuntu/ natty/main libxcb-dri2-0 armel 1.7-2ubuntu2 [7068 B] Get:40 http://ftpmaster.internal/ubuntu/ natty/main libxcb-shape0 armel 1.7-2ubuntu2 [6844 B] Get:41 http://ftpmaster.internal/ubuntu/ natty/main libxcb-xfixes0 armel 1.7-2ubuntu2 [9378 B] Get:42 http://ftpmaster.internal/ubuntu/ natty/main libxfixes3 armel 1:4.0.5-1ubuntu1 [9946 B] Get:43 http://ftpmaster.internal/ubuntu/ natty/main libxdamage1 armel 1:1.1.3-1ubuntu1 [6790 B] Get:44 http://ftpmaster.internal/ubuntu/ natty/main libxi6 armel 2:1.4.1-1ubuntu2 [25.4 kB] Get:45 http://ftpmaster.internal/ubuntu/ natty/main libxau-dev armel 1:1.0.6-1ubuntu1 [11.7 kB] Get:46 http://ftpmaster.internal/ubuntu/ natty/main libxdmcp-dev armel 1:1.1.0-1ubuntu1 [44.2 kB] Get:47 http://ftpmaster.internal/ubuntu/ natty/main x11proto-input-dev all 2.0.1-1ubuntu1 [68.5 kB] Get:48 http://ftpmaster.internal/ubuntu/ natty/main x11proto-kb-dev all 1.0.5-1 [25.4 kB] Get:49 http://ftpmaster.internal/ubuntu/ natty/main xtrans-dev all 1.2.6-1 [80.8 kB] Get:50 http://ftpmaster.internal/ubuntu/ natty/main libpthread-stubs0 armel 0.3-2 [3200 B] Get:51 http://ftpmaster.internal/ubuntu/ natty/main libpthread-stubs0-dev armel 0.3-2 [2424 B] Get:52 http://ftpmaster.internal/ubuntu/ natty/main libxcb1-dev armel 1.7-2ubuntu2 [73.7 kB] Get:53 http://ftpmaster.internal/ubuntu/ natty/main libx11-dev armel 2:1.4.2-1ubuntu3 [3086 kB] Get:54 http://ftpmaster.internal/ubuntu/ natty/main libxmu-headers all 2:1.1.0-1 [56.3 kB] Get:55 http://ftpmaster.internal/ubuntu/ natty/main libxt6 armel 1:1.0.9-1ubuntu1 [143 kB] Get:56 http://ftpmaster.internal/ubuntu/ natty/main libxxf86vm1 armel 1:1.1.1-1ubuntu1 [10.2 kB] Get:57 http://ftpmaster.internal/ubuntu/ natty/main x11proto-dri2-dev all 2.3-1 [15.1 kB] Get:58 http://ftpmaster.internal/ubuntu/ natty/main libmagic1 armel 5.04-5ubuntu2 [201 kB] Get:59 http://ftpmaster.internal/ubuntu/ natty/main file armel 5.04-5ubuntu2 [22.2 kB] Get:60 http://ftpmaster.internal/ubuntu/ natty/main mime-support all 3.51-1ubuntu1 [30.7 kB] Get:61 http://ftpmaster.internal/ubuntu/ natty/main python2.7 armel 2.7.1-5ubuntu1 [2508 kB] Get:62 http://ftpmaster.internal/ubuntu/ natty/main python all 2.7.1-0ubuntu5 [163 kB] Get:63 http://ftpmaster.internal/ubuntu/ natty/main bsdmainutils armel 8.2.2 [193 kB] Get:64 http://ftpmaster.internal/ubuntu/ natty/main ed armel 1.5-1 [55.0 kB] Get:65 http://ftpmaster.internal/ubuntu/ natty/main gettext-base armel 0.18.1.1-3ubuntu1 [56.1 kB] Get:66 http://ftpmaster.internal/ubuntu/ natty/main groff-base armel 1.21-5 [929 kB] Get:67 http://ftpmaster.internal/ubuntu/ natty/main libpipeline1 armel 1.2.0-1 [20.3 kB] Get:68 http://ftpmaster.internal/ubuntu/ natty/main libpython2.7 armel 2.7.1-5ubuntu1 [1036 kB] Get:69 http://ftpmaster.internal/ubuntu/ natty/main libxml2 armel 2.7.8.dfsg-2 [561 kB] Get:70 http://ftpmaster.internal/ubuntu/ natty/main man-db armel 2.5.9-4 [658 kB] Get:71 http://ftpmaster.internal/ubuntu/ natty/main python-support all 1.0.10ubuntu3 [25.9 kB] Get:72 http://ftpmaster.internal/ubuntu/ natty/main bison armel 1:2.4.1.dfsg-3 [473 kB] Get:73 http://ftpmaster.internal/ubuntu/ natty/main chrpath armel 0.13-2build2 [13.5 kB] Get:74 http://ftpmaster.internal/ubuntu/ natty/main libarchive1 armel 2.8.4-1 [140 kB] Get:75 http://ftpmaster.internal/ubuntu/ natty/main libcurl3 armel 7.21.3-1ubuntu1 [200 kB] Get:76 http://ftpmaster.internal/ubuntu/ natty/main libxmlrpc-core-c3-0 armel 1.16.32-0ubuntu3 [87.2 kB] Get:77 http://ftpmaster.internal/ubuntu/ natty/main emacsen-common all 1.4.19ubuntu2 [17.7 kB] Get:78 http://ftpmaster.internal/ubuntu/ natty/main cmake-data all 2.8.3-3ubuntu7 [637 kB] Get:79 http://ftpmaster.internal/ubuntu/ natty/main cmake armel 2.8.3-3ubuntu7 [3453 kB] Get:80 http://ftpmaster.internal/ubuntu/ natty/main html2text armel 1.3.2a-15 [94.3 kB] Get:81 http://ftpmaster.internal/ubuntu/ natty/main libcroco3 armel 0.6.2-1 [89.5 kB] Get:82 http://ftpmaster.internal/ubuntu/ natty/main libunistring0 armel 0.9.3-3 [394 kB] Get:83 http://ftpmaster.internal/ubuntu/ natty/main gettext armel 0.18.1.1-3ubuntu1 [1156 kB] Get:84 http://ftpmaster.internal/ubuntu/ natty/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:85 http://ftpmaster.internal/ubuntu/ natty/main po-debconf all 1.0.16+nmu1 [212 kB] Get:86 http://ftpmaster.internal/ubuntu/ natty/main debhelper all 8.1.2ubuntu4 [482 kB] Get:87 http://ftpmaster.internal/ubuntu/ natty/main tex-common all 2.09 [711 kB] Get:88 http://ftpmaster.internal/ubuntu/ natty/main texlive-common all 2009-11 [101 kB] Get:89 http://ftpmaster.internal/ubuntu/ natty/main texlive-doc-base all 2009-2 [1339 kB] Get:90 http://ftpmaster.internal/ubuntu/ natty/main liblcms1 armel 1.18.dfsg-1.2ubuntu1 [86.9 kB] Get:91 http://ftpmaster.internal/ubuntu/ natty/main libpoppler12 armel 0.16.2-0ubuntu1 [632 kB] Get:92 http://ftpmaster.internal/ubuntu/ natty/main luatex armel 0.65.0-1ubuntu2 [2193 kB] Get:93 http://ftpmaster.internal/ubuntu/ natty/main libkpathsea5 armel 2009-8ubuntu1 [54.4 kB] Get:94 http://ftpmaster.internal/ubuntu/ natty/main libxmu6 armel 2:1.1.0-1 [43.2 kB] Get:95 http://ftpmaster.internal/ubuntu/ natty/main libxpm4 armel 1:3.5.9-1ubuntu1 [31.6 kB] Get:96 http://ftpmaster.internal/ubuntu/ natty/main libxaw7 armel 2:1.0.9-2 [159 kB] Get:97 http://ftpmaster.internal/ubuntu/ natty/main texlive-binaries armel 2009-8ubuntu1 [7896 kB] Get:98 http://ftpmaster.internal/ubuntu/ natty/main texlive-base all 2009-11 [14.7 MB] Get:99 http://ftpmaster.internal/ubuntu/ natty/main texlive-extra-utils all 2009-10ubuntu1 [1576 kB] Get:100 http://ftpmaster.internal/ubuntu/ natty/main preview-latex-style all 11.86-2ubuntu1 [108 kB] Get:101 http://ftpmaster.internal/ubuntu/ natty/main texlive-pictures all 2009-11 [866 kB] Get:102 http://ftpmaster.internal/ubuntu/ natty/main texlive-latex-base all 2009-11 [1342 kB] Get:103 http://ftpmaster.internal/ubuntu/ natty/main texlive-latex-extra all 2009-10ubuntu1 [4717 kB] Get:104 http://ftpmaster.internal/ubuntu/ natty/main texlive-latex-recommended all 2009-11 [6588 kB] Get:105 http://ftpmaster.internal/ubuntu/ natty/main latex-xcolor all 2.11-1 [609 kB] Get:106 http://ftpmaster.internal/ubuntu/ natty/main doxygen-latex all 1.7.3-6ubuntu1 [2726 B] Get:107 http://ftpmaster.internal/ubuntu/ natty/main doxygen armel 1.7.3-6ubuntu1 [1856 kB] Get:108 http://ftpmaster.internal/ubuntu/ natty/main libcups2 armel 1.4.6-4 [147 kB] Get:109 http://ftpmaster.internal/ubuntu/ natty/main libcupsimage2 armel 1.4.6-4 [49.2 kB] Get:110 http://ftpmaster.internal/ubuntu/ natty/main libijs-0.35 armel 0.35-7ubuntu1 [13.6 kB] Get:111 http://ftpmaster.internal/ubuntu/ natty/main libjasper1 armel 1.900.1-7ubuntu2 [130 kB] Get:112 http://ftpmaster.internal/ubuntu/ natty/main libjbig2dec0 armel 0.11-1ubuntu1 [34.7 kB] Get:113 http://ftpmaster.internal/ubuntu/ natty/main libpaper1 armel 1.1.24 [20.6 kB] Get:114 http://ftpmaster.internal/ubuntu/ natty/main libgs9-common all 9.01~dfsg-1ubuntu5 [4393 kB] Get:115 http://ftpmaster.internal/ubuntu/ natty/main gs-cjk-resource all 1.20100103-2 [1478 kB] Get:116 http://ftpmaster.internal/ubuntu/ natty/main libgs9 armel 9.01~dfsg-1ubuntu5 [1942 kB] Get:117 http://ftpmaster.internal/ubuntu/ natty/main gsfonts all 1:8.11+urwcyr1.0.7~pre44-4.2ubuntu1 [3374 kB] Get:118 http://ftpmaster.internal/ubuntu/ natty/main ghostscript armel 9.01~dfsg-1ubuntu5 [44.5 kB] Get:119 http://ftpmaster.internal/ubuntu/ natty/main libcdt4 armel 2.26.3-5ubuntu1 [23.1 kB] Get:120 http://ftpmaster.internal/ubuntu/ natty/main libcgraph5 armel 2.26.3-5ubuntu1 [43.4 kB] Get:121 http://ftpmaster.internal/ubuntu/ natty/main libgd2-noxpm armel 2.0.36~rc1~dfsg-5ubuntu2 [188 kB] Get:122 http://ftpmaster.internal/ubuntu/ natty/main libgraph4 armel 2.26.3-5ubuntu1 [33.5 kB] Get:123 http://ftpmaster.internal/ubuntu/ natty/main libpathplan4 armel 2.26.3-5ubuntu1 [27.9 kB] Get:124 http://ftpmaster.internal/ubuntu/ natty/main libgvc5 armel 2.26.3-5ubuntu1 [431 kB] Get:125 http://ftpmaster.internal/ubuntu/ natty/main libgvpr1 armel 2.26.3-5ubuntu1 [185 kB] Get:126 http://ftpmaster.internal/ubuntu/ natty/main graphviz armel 2.26.3-5ubuntu1 [305 kB] Get:127 http://ftpmaster.internal/ubuntu/ natty/universe gs-common all 9.01~dfsg-1ubuntu5 [14.2 kB] Get:128 http://ftpmaster.internal/ubuntu/ natty/main libicu44 armel 4.4.2-2 [6733 kB] Get:129 http://ftpmaster.internal/ubuntu/ natty/main libboost1.42-dev armel 1.42.0-4ubuntu2 [6493 kB] Get:130 http://ftpmaster.internal/ubuntu/ natty/main libboost-dev armel 1.42.0.1ubuntu1 [2206 B] Get:131 http://ftpmaster.internal/ubuntu/ natty/main libboost-date-time1.42.0 armel 1.42.0-4ubuntu2 [44.0 kB] Get:132 http://ftpmaster.internal/ubuntu/ natty/main libboost-serialization1.42.0 armel 1.42.0-4ubuntu2 [186 kB] Get:133 http://ftpmaster.internal/ubuntu/ natty/main libboost-serialization1.42-dev armel 1.42.0-4ubuntu2 [341 kB] Get:134 http://ftpmaster.internal/ubuntu/ natty/main libboost-date-time1.42-dev armel 1.42.0-4ubuntu2 [54.5 kB] Get:135 http://ftpmaster.internal/ubuntu/ natty/universe libboost-date-time-dev armel 1.42.0.1ubuntu1 [2090 B] Get:136 http://ftpmaster.internal/ubuntu/ natty/universe libasio-dev all 1.4.1-3ubuntu1 [209 kB] Get:137 http://ftpmaster.internal/ubuntu/ natty/main libaudio2 armel 1.9.2-4ubuntu1 [49.3 kB] Get:138 http://ftpmaster.internal/ubuntu/ natty/main libboost-regex1.42.0 armel 1.42.0-4ubuntu2 [364 kB] Get:139 http://ftpmaster.internal/ubuntu/ natty/main libicu-dev armel 4.4.2-2 [8688 kB] Get:140 http://ftpmaster.internal/ubuntu/ natty/main libboost-regex1.42-dev armel 1.42.0-4ubuntu2 [616 kB] Get:141 http://ftpmaster.internal/ubuntu/ natty/main libboost-iostreams1.42.0 armel 1.42.0-4ubuntu2 [50.3 kB] Get:142 http://ftpmaster.internal/ubuntu/ natty/main libboost-iostreams1.42-dev armel 1.42.0-4ubuntu2 [80.0 kB] Get:143 http://ftpmaster.internal/ubuntu/ natty/main libboost-iostreams-dev armel 1.42.0.1ubuntu1 [2088 B] Get:144 http://ftpmaster.internal/ubuntu/ natty/main libboost-math1.42.0 armel 1.42.0-4ubuntu2 [277 kB] Get:145 http://ftpmaster.internal/ubuntu/ natty/main libboost-math1.42-dev armel 1.42.0-4ubuntu2 [994 kB] Get:146 http://ftpmaster.internal/ubuntu/ natty/universe libboost-math-dev armel 1.42.0.1ubuntu1 [2296 B] Get:147 http://ftpmaster.internal/ubuntu/ natty/universe libboost-regex-dev armel 1.42.0.1ubuntu1 [2354 B] Get:148 http://ftpmaster.internal/ubuntu/ natty/main libboost-system1.42.0 armel 1.42.0-4ubuntu2 [30.2 kB] Get:149 http://ftpmaster.internal/ubuntu/ natty/main libboost-system1.42-dev armel 1.42.0-4ubuntu2 [33.3 kB] Get:150 http://ftpmaster.internal/ubuntu/ natty/universe libboost-system-dev armel 1.42.0.1ubuntu1 [2234 B] Get:151 http://ftpmaster.internal/ubuntu/ natty/main libboost-thread1.42.0 armel 1.42.0-4ubuntu2 [53.2 kB] Get:152 http://ftpmaster.internal/ubuntu/ natty/main libboost-thread1.42-dev armel 1.42.0-4ubuntu2 [65.2 kB] Get:153 http://ftpmaster.internal/ubuntu/ natty/universe libboost-thread-dev armel 1.42.0.1ubuntu1 [2122 B] Get:154 http://ftpmaster.internal/ubuntu/ natty/main libdrm-dev armel 2.4.23-1ubuntu6 [117 kB] Get:155 http://ftpmaster.internal/ubuntu/ natty/main libgl1-mesa-glx armel 7.10.1-0ubuntu3 [105 kB] Get:156 http://ftpmaster.internal/ubuntu/ natty/main libegl1-mesa armel 7.10.1-0ubuntu3 [724 kB] Get:157 http://ftpmaster.internal/ubuntu/ natty/main x11proto-gl-dev all 1.4.12-1 [19.2 kB] Get:158 http://ftpmaster.internal/ubuntu/ natty/main x11proto-xext-dev all 7.1.99.0~git20110111.9df8b776-0ubuntu2 [254 kB] Get:159 http://ftpmaster.internal/ubuntu/ natty/main libxext-dev armel 2:1.2.0-2ubuntu1 [132 kB] Get:160 http://ftpmaster.internal/ubuntu/ natty/main x11proto-xf86vidmode-dev all 2.3.1-1 [6050 B] Get:161 http://ftpmaster.internal/ubuntu/ natty/main libxxf86vm-dev armel 1:1.1.1-1ubuntu1 [15.7 kB] Get:162 http://ftpmaster.internal/ubuntu/ natty/main x11proto-fixes-dev all 1:4.1.2-1 [11.3 kB] Get:163 http://ftpmaster.internal/ubuntu/ natty/main libxfixes-dev armel 1:4.0.5-1ubuntu1 [12.6 kB] Get:164 http://ftpmaster.internal/ubuntu/ natty/main x11proto-damage-dev all 1:1.2.1-1 [6586 B] Get:165 http://ftpmaster.internal/ubuntu/ natty/main libxdamage-dev armel 1:1.1.3-1ubuntu1 [6762 B] Get:166 http://ftpmaster.internal/ubuntu/ natty/main libegl1-mesa-dev armel 7.10.1-0ubuntu3 [16.4 kB] Get:167 http://ftpmaster.internal/ubuntu/ natty/main libexpat1-dev armel 2.0.1-7ubuntu3 [186 kB] Get:168 http://ftpmaster.internal/ubuntu/ natty/main libfftw3-3 armel 3.2.2-1 [1293 kB] Get:169 http://ftpmaster.internal/ubuntu/ natty/main libfftw3-dev armel 3.2.2-1 [1521 kB] Get:170 http://ftpmaster.internal/ubuntu/ natty/main libgles2-mesa armel 7.10.1-0ubuntu3 [510 kB] Get:171 http://ftpmaster.internal/ubuntu/ natty/main libgles2-mesa-dev armel 7.10.1-0ubuntu3 [16.9 kB] Get:172 http://ftpmaster.internal/ubuntu/ natty/main libglew1.5 armel 1.5.7.is.1.5.2-1ubuntu2 [107 kB] Get:173 http://ftpmaster.internal/ubuntu/ natty/main mesa-common-dev armel 7.10.1-0ubuntu3 [223 kB] Get:174 http://ftpmaster.internal/ubuntu/ natty/main libgl1-mesa-dev armel 7.10.1-0ubuntu3 [7662 B] Get:175 http://ftpmaster.internal/ubuntu/ natty/main libglu1-mesa armel 7.10.1-0ubuntu3 [131 kB] Get:176 http://ftpmaster.internal/ubuntu/ natty/main libglu1-mesa-dev armel 7.10.1-0ubuntu3 [170 kB] Get:177 http://ftpmaster.internal/ubuntu/ natty/main libglew1.5-dev armel 1.5.7.is.1.5.2-1ubuntu2 [233 kB] Get:178 http://ftpmaster.internal/ubuntu/ natty/main libgsl0ldbl armel 1.14+dfsg-1 [813 kB] Get:179 http://ftpmaster.internal/ubuntu/ natty/main libgsl0-dev armel 1.14+dfsg-1 [1055 kB] Get:180 http://ftpmaster.internal/ubuntu/ natty/main libjs-jquery all 1.5-2ubuntu1 [95.9 kB] Get:181 http://ftpmaster.internal/ubuntu/ natty/main libmng1 armel 1.0.10-1 [194 kB] Get:182 http://ftpmaster.internal/ubuntu/ natty/main libqtcore4 armel 4:4.7.2-0ubuntu6 [2404 kB] Get:183 http://ftpmaster.internal/ubuntu/ natty/main libqt4-xml armel 4:4.7.2-0ubuntu6 [94.9 kB] Get:184 http://ftpmaster.internal/ubuntu/ natty/main libqt4-dbus armel 4:4.7.2-0ubuntu6 [196 kB] Get:185 http://ftpmaster.internal/ubuntu/ natty/main libqt4-network armel 4:4.7.2-0ubuntu6 [493 kB] Get:186 http://ftpmaster.internal/ubuntu/ natty/main libqt4-script armel 4:4.7.2-0ubuntu6 [708 kB] Get:187 http://ftpmaster.internal/ubuntu/ natty/main libqt4-sql armel 4:4.7.2-0ubuntu6 [94.8 kB] Get:188 http://ftpmaster.internal/ubuntu/ natty/main libqt4-xmlpatterns armel 4:4.7.2-0ubuntu6 [1180 kB] Get:189 http://ftpmaster.internal/ubuntu/ natty/main libqtgui4 armel 4:4.7.2-0ubuntu6 [4154 kB] Get:190 http://ftpmaster.internal/ubuntu/ natty/main libqt4-declarative armel 4:4.7.2-0ubuntu6 [991 kB] Get:191 http://ftpmaster.internal/ubuntu/ natty/main libqt4-designer armel 4:4.7.2-0ubuntu6 [4004 kB] Get:192 http://ftpmaster.internal/ubuntu/ natty/main libqt4-qt3support armel 4:4.7.2-0ubuntu6 [1059 kB] Get:193 http://ftpmaster.internal/ubuntu/ natty/main libqt4-svg armel 4:4.7.2-0ubuntu6 [140 kB] Get:194 http://ftpmaster.internal/ubuntu/ natty/main libqt4-scripttools armel 4:4.7.2-0ubuntu6 [225 kB] Get:195 http://ftpmaster.internal/ubuntu/ natty/main libqt4-help armel 4:4.7.2-0ubuntu6 [205 kB] Get:196 http://ftpmaster.internal/ubuntu/ natty/main libqt4-test armel 4:4.7.2-0ubuntu6 [57.0 kB] Get:197 http://ftpmaster.internal/ubuntu/ natty/main qt4-qmake armel 4:4.7.2-0ubuntu6 [1396 kB] Get:198 http://ftpmaster.internal/ubuntu/ natty/main libqt4-dev armel 4:4.7.2-0ubuntu6 [4989 kB] Get:199 http://ftpmaster.internal/ubuntu/ natty/main libqt4-opengl armel 4:4.7.2-0ubuntu6 [201 kB] Get:200 http://ftpmaster.internal/ubuntu/ natty/main libqt4-gui armel 4:4.7.2-0ubuntu6 [9664 B] Get:201 http://ftpmaster.internal/ubuntu/ natty/main libqt4-opengl-dev armel 4:4.7.2-0ubuntu6 [27.7 kB] Get:202 http://ftpmaster.internal/ubuntu/ natty/main libsm-dev armel 2:1.2.0-1ubuntu1 [88.8 kB] Get:203 http://ftpmaster.internal/ubuntu/ natty/main zlib1g-dev armel 1:1.2.3.4.dfsg-3ubuntu3 [161 kB] Get:204 http://ftpmaster.internal/ubuntu/ natty/main libssl-dev armel 0.9.8o-5ubuntu1 [1964 kB] Get:205 http://ftpmaster.internal/ubuntu/ natty/main libtidy-0.99-0 armel 20091223cvs-1 [121 kB] Get:206 http://ftpmaster.internal/ubuntu/ natty/main libxt-dev armel 1:1.0.9-1ubuntu1 [455 kB] Get:207 http://ftpmaster.internal/ubuntu/ natty/main libxmu-dev armel 2:1.1.0-1 [51.9 kB] Get:208 http://ftpmaster.internal/ubuntu/ natty/main x11proto-render-dev all 2:0.11.1-1 [18.5 kB] Get:209 http://ftpmaster.internal/ubuntu/ natty/main libxrender-dev armel 1:0.9.6-1ubuntu1 [25.2 kB] Get:210 http://ftpmaster.internal/ubuntu/ natty/main python2.7-dev armel 2.7.1-5ubuntu1 [4748 kB] Get:211 http://ftpmaster.internal/ubuntu/ natty/main python-dev all 2.7.1-0ubuntu5 [1012 B] Get:212 http://ftpmaster.internal/ubuntu/ natty/main python-sip armel 4.12.1-1 [123 kB] Get:213 http://ftpmaster.internal/ubuntu/ natty/main python-sip-dev armel 4.12.1-1 [369 kB] Get:214 http://ftpmaster.internal/ubuntu/ natty/main texlive-fonts-recommended all 2009-11 [7166 kB] Get:215 http://ftpmaster.internal/ubuntu/ natty/main tidy armel 20091223cvs-1 [23.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 153 MB in 19s (7899 kB/s) Selecting previously deselected package libexpat1. 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Setting up python2.7 (2.7.1-5ubuntu1) ... Setting up python (2.7.1-0ubuntu5) ... Setting up bsdmainutils (8.2.2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write ((null)) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from ((null)) in auto mode. Setting up ed (1.5-1) ... Setting up gettext-base (0.18.1.1-3ubuntu1) ... Setting up groff-base (1.21-5) ... Setting up libpipeline1 (1.2.0-1) ... Setting up libpython2.7 (2.7.1-5ubuntu1) ... Setting up libxml2 (2.7.8.dfsg-2) ... Setting up man-db (2.5.9-4) ... Building database of manual pages ... Setting up python-support (1.0.10ubuntu3) ... Setting up bison (1:2.4.1.dfsg-3) ... update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc ((null)) in auto mode. Setting up chrpath (0.13-2build2) ... Setting up libarchive1 (2.8.4-1) ... Setting up libcurl3 (7.21.3-1ubuntu1) ... Setting up libxmlrpc-core-c3-0 (1.16.32-0ubuntu3) ... Setting up emacsen-common (1.4.19ubuntu2) ... emacsen-common: Handling install of emacsen flavor emacs install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package emacsen-common should be updated. Setting up cmake-data (2.8.3-3ubuntu7) ... emacsen-common: Handling install of emacsen flavor emacs Setting up cmake (2.8.3-3ubuntu7) ... Setting up html2text (1.3.2a-15) ... Setting up libcroco3 (0.6.2-1) ... Setting up libunistring0 (0.9.3-3) ... Setting up gettext (0.18.1.1-3ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu1) ... Setting up debhelper (8.1.2ubuntu4) ... Setting up tex-common (2.09) ... Creating config file /etc/texmf/texmf.d/05TeXMF.cnf with new version Creating config file /etc/texmf/texmf.d/15Plain.cnf with new version Creating config file /etc/texmf/texmf.d/45TeXinputs.cnf with new version Creating config file /etc/texmf/texmf.d/55Fonts.cnf with new version Creating config file /etc/texmf/texmf.d/65BibTeX.cnf with new version Creating config file /etc/texmf/texmf.d/75DviPS.cnf with new version Creating config file /etc/texmf/texmf.d/80DVIPDFMx.cnf with new version Creating config file /etc/texmf/texmf.d/85Misc.cnf with new version Creating config file /etc/texmf/texmf.d/90TeXDoc.cnf with new version Creating config file /etc/texmf/texmf.d/95NonPath.cnf with new version Creating config file /etc/texmf/updmap.d/00updmap.cfg with new version Creating config file /etc/texmf/texmf.cnf with new version /usr/sbin/update-language-def: line 779: printf: missing unicode digit for \u Running mktexlsr. This may take some time... done. texlive-base is not ready, delaying updmap-sys call texlive-base is not ready, skipping fmtutil-sys --all call Setting up texlive-common (2009-11) ... Setting up texlive-doc-base (2009-2) ... /usr/sbin/update-language-def: line 779: printf: missing unicode digit for \u Setting up liblcms1 (1.18.dfsg-1.2ubuntu1) ... Setting up libpoppler12 (0.16.2-0ubuntu1) ... Setting up luatex (0.65.0-1ubuntu2) ... texlive-base is not ready, cannot create formats Setting up libkpathsea5 (2009-8ubuntu1) ... Setting up libxmu6 (2:1.1.0-1) ... Setting up libxpm4 (1:3.5.9-1ubuntu1) ... Setting up libxaw7 (2:1.0.9-2) ... Setting up texlive-binaries (2009-8ubuntu1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin ((null)) in auto mode. update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex ((null)) in auto mode. Building format(s) --refresh. This may take some time... done. 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Setting up libexpat1-dev (2.0.1-7ubuntu3) ... Setting up libfftw3-3 (3.2.2-1) ... Setting up libfftw3-dev (3.2.2-1) ... Setting up libgles2-mesa (7.10.1-0ubuntu3) ... Setting up libgles2-mesa-dev (7.10.1-0ubuntu3) ... Setting up libglew1.5 (1.5.7.is.1.5.2-1ubuntu2) ... Setting up mesa-common-dev (7.10.1-0ubuntu3) ... Setting up libgl1-mesa-dev (7.10.1-0ubuntu3) ... Setting up libglu1-mesa (7.10.1-0ubuntu3) ... Setting up libglu1-mesa-dev (7.10.1-0ubuntu3) ... Setting up libglew1.5-dev (1.5.7.is.1.5.2-1ubuntu2) ... Setting up libgsl0ldbl (1.14+dfsg-1) ... Setting up libgsl0-dev (1.14+dfsg-1) ... Setting up libjs-jquery (1.5-2ubuntu1) ... Setting up libmng1 (1.0.10-1) ... Setting up libqtcore4 (4:4.7.2-0ubuntu6) ... Setting up libqt4-xml (4:4.7.2-0ubuntu6) ... Setting up libqt4-dbus (4:4.7.2-0ubuntu6) ... Setting up libqt4-network (4:4.7.2-0ubuntu6) ... Setting up libqt4-script (4:4.7.2-0ubuntu6) ... Setting up libqt4-sql (4:4.7.2-0ubuntu6) ... Setting up libqt4-xmlpatterns (4:4.7.2-0ubuntu6) ... Setting up libqtgui4 (4:4.7.2-0ubuntu6) ... Setting up libqt4-declarative (4:4.7.2-0ubuntu6) ... Setting up libqt4-designer (4:4.7.2-0ubuntu6) ... Setting up libqt4-qt3support (4:4.7.2-0ubuntu6) ... Setting up libqt4-svg (4:4.7.2-0ubuntu6) ... Setting up libqt4-scripttools (4:4.7.2-0ubuntu6) ... Setting up libqt4-help (4:4.7.2-0ubuntu6) ... Setting up libqt4-test (4:4.7.2-0ubuntu6) ... Setting up qt4-qmake (4:4.7.2-0ubuntu6) ... update-alternatives: using /usr/bin/qmake-qt4 to provide /usr/bin/qmake ((null)) in auto mode. Setting up libqt4-dev (4:4.7.2-0ubuntu6) ... update-alternatives: using /usr/bin/moc-qt4 to provide /usr/bin/moc ((null)) in auto mode. update-alternatives: using /usr/bin/uic-qt4 to provide /usr/bin/uic ((null)) in auto mode. update-alternatives: warning: skip creation of /usr/share/man/man1/uic.1.gz because associated file /usr/share/man/man1/uic-qt4.1.gz (of link group (null)) doesn't exist. update-alternatives: using /usr/bin/lupdate-qt4 to provide /usr/bin/lupdate ((null)) in auto mode. update-alternatives: using /usr/bin/lrelease-qt4 to provide /usr/bin/lrelease ((null)) in auto mode. Setting up libqt4-opengl (4:4.7.2-0ubuntu6) ... Setting up libqt4-gui (4:4.7.2-0ubuntu6) ... Setting up libqt4-opengl-dev (4:4.7.2-0ubuntu6) ... Setting up libsm-dev (2:1.2.0-1ubuntu1) ... Setting up zlib1g-dev (1:1.2.3.4.dfsg-3ubuntu3) ... Setting up libssl-dev (0.9.8o-5ubuntu1) ... Setting up libtidy-0.99-0 (20091223cvs-1) ... Setting up libxt-dev (1:1.0.9-1ubuntu1) ... Setting up libxmu-dev (2:1.1.0-1) ... Setting up x11proto-render-dev (2:0.11.1-1) ... Setting up libxrender-dev (1:0.9.6-1ubuntu1) ... Setting up python2.7-dev (2.7.1-5ubuntu1) ... Setting up python-dev (2.7.1-0ubuntu5) ... Setting up python-sip (4.12.1-1) ... Setting up python-sip-dev (4.12.1-1) ... Setting up tidy (20091223cvs-1) ... Processing triggers for tex-common ... /usr/sbin/update-language-def: line 779: printf: missing unicode digit for \u Running mktexlsr. This may take some time... done. Setting up texlive-base (2009-11) ... /usr/sbin/update-language-def: line 779: printf: missing unicode digit for \u Running mktexlsr. This may take some time... done. Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-base.cnf. This may take some time... done. Processing triggers for tex-common ... /usr/sbin/update-language-def: line 779: printf: missing unicode digit for \u Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building e-tex based formats --byhyphen /var/lib/texmf/tex/generic/config/language.def. This may take some time... done. Setting up texlive-latex-base (2009-11) ... /usr/sbin/update-language-def: line 779: printf: missing unicode digit for \u Running mktexlsr. This may take some time... done. Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-latex-base.cnf. This may take some time... done. Setting up texlive-fonts-recommended (2009-11) ... /usr/sbin/update-language-def: line 779: printf: missing unicode digit for \u Setting up texlive-extra-utils (2009-10ubuntu1) ... /usr/sbin/update-language-def: line 779: printf: missing unicode digit for \u Setting up texlive-pictures (2009-11) ... /usr/sbin/update-language-def: line 779: printf: missing unicode digit for \u Processing triggers for tex-common ... /usr/sbin/update-language-def: line 779: printf: missing unicode digit for \u Running mktexlsr. This may take some time... done. Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Setting up texlive-latex-extra (2009-10ubuntu1) ... /usr/sbin/update-language-def: line 779: printf: missing unicode digit for \u Setting up texlive-latex-recommended (2009-11) ... /usr/sbin/update-language-def: line 779: printf: missing unicode digit for \u Processing triggers for tex-common ... /usr/sbin/update-language-def: line 779: printf: missing unicode digit for \u Running mktexlsr. This may take some time... done. Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Setting up latex-xcolor (2.11-1) ... Setting up gs-cjk-resource (1.20100103-2) ... Setting up doxygen-latex (1.7.3-6ubuntu1) ... Setting up libgs9 (9.01~dfsg-1ubuntu5) ... Setting up ghostscript (9.01~dfsg-1ubuntu5) ... Setting up gs-common (9.01~dfsg-1ubuntu5) ... Setting up doxygen (1.7.3-6ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Processing triggers for python-support ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.13-0ubuntu12 make_3.81-8ubuntu1 dpkg-dev_1.16.0~ubuntu6 gcc-4.5_4.5.2-8ubuntu1 g++-4.5_4.5.2-8ubuntu1 binutils_2.21.0.20110327-2ubuntu2 libstdc++6-4.5-dev_4.5.2-8ubuntu1 libstdc++6_4.5.2-8ubuntu1 ------------------------------------------------------------------------------ gpgv: Signature made Tue Jan 25 21:02:18 2011 UTC using RSA key ID 83135D45 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./ball_1.3.2-2ubuntu3.dsc dpkg-source: info: extracting ball in ball-1.3.2 dpkg-source: info: unpacking ball_1.3.2.orig.tar.gz dpkg-source: info: applying ball_1.3.2-2ubuntu3.diff.gz dpkg-source: info: upstream files that have been modified: ball-1.3.2/source/APPLICATIONS/BALLVIEW/CMakeLists.txt ball-1.3.2/source/STRUCTURE/smartsMatcher.C dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor): dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor): -Wl,-Bsymbolic-functions dpkg-buildpackage: source package ball dpkg-buildpackage: source version 1.3.2-2ubuntu3 dpkg-source --before-build ball-1.3.2 dpkg-buildpackage: host architecture armel /usr/bin/fakeroot debian/rules clean dh_testdir dh_testroot bash debian/debian-ball-install clean clean dh_clean build-stamp configure-stamp rm -f debian/libball1.3.substvars rm -f debian/libball1.3.*.debhelper rm -f debian/libball1.3.debhelper.log rm -rf debian/libball1.3/ rm -f debian/libball1.3-dev.substvars rm -f debian/libball1.3-dev.*.debhelper rm -f debian/libball1.3-dev.debhelper.log rm -rf debian/libball1.3-dev/ rm -f debian/libballview1.3.substvars rm -f debian/libballview1.3.*.debhelper rm -f debian/libballview1.3.debhelper.log rm -rf debian/libballview1.3/ rm -f debian/libballview1.3-dev.substvars rm -f debian/libballview1.3-dev.*.debhelper rm -f debian/libballview1.3-dev.debhelper.log rm -rf debian/libballview1.3-dev/ rm -f debian/python-ball.substvars rm -f debian/python-ball.*.debhelper rm -f debian/python-ball.debhelper.log rm -rf debian/python-ball/ rm -f debian/python-ballview.substvars rm -f debian/python-ballview.*.debhelper rm -f debian/python-ballview.debhelper.log rm -rf debian/python-ballview/ rm -f debian/ballview.substvars rm -f debian/ballview.*.debhelper rm -f debian/ballview.debhelper.log rm -rf debian/ballview/ rm -f debian/libball1.3-doc.substvars rm -f debian/libball1.3-doc.*.debhelper rm -f debian/libball1.3-doc.debhelper.log rm -rf debian/libball1.3-doc/ rm -f -- build-stamp configure-stamp rm -f debian/files find . \( \( -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} \; \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \) debian/rules build dh_testdir bash debian/debian-ball-install configure configure -- The C compiler identification is GNU -- The CXX compiler identification is GNU -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- BALL build type: Release (optimization enabled) -- g++ requires -std=c++0x for tr1 -- Compiler checks for conversion: OFF -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Check size of int -- Check size of int - done -- Check size of char -- Check size of char - done -- Check size of long -- Check size of long - done -- Check size of size_t -- Check size of size_t - done -- Check size of void* -- Check size of void* - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of unsigned long -- Check size of unsigned long - done -- Check size of unsigned long long -- Check size of unsigned long long - done -- Check size of uint64_t -- Check size of uint64_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Looking for C++ include unistd.h -- Looking for C++ include unistd.h - found -- Looking for C++ include process.h -- Looking for C++ include process.h - not found -- Looking for C++ include time.h -- Looking for C++ include time.h - found -- Looking for C++ include limits.h -- Looking for C++ include limits.h - found -- Looking for C++ include dirent.h -- Looking for C++ include dirent.h - found -- Looking for C++ include direct.h -- Looking for C++ include direct.h - not found -- Looking for C++ include pwd.h -- Looking for C++ include pwd.h - found -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Looking for C++ include sys/ioctl.h -- Looking for C++ include sys/ioctl.h - found -- Looking for C++ include sys/time.h -- Looking for C++ include sys/time.h - found -- Looking for C++ include sys/stat.h -- Looking for C++ include sys/stat.h - found -- Looking for C++ include sys/times.h -- Looking for C++ include sys/times.h - found -- Looking for C++ include sys/types.h -- Looking for C++ include sys/types.h - found -- Looking for C++ include sys/param.h -- Looking for C++ include sys/param.h - found -- Looking for C++ include sys/socket.h -- Looking for C++ include sys/socket.h - found -- Looking for C++ include sys/sysinfo.h -- Looking for C++ include sys/sysinfo.h - found -- Do we need float.h for limits.h? -- Looking for FLT_MIN -- Looking for FLT_MIN - not found. -- Looking for FLT_MIN -- Looking for FLT_MIN - found -- Performing Test BALL_HAS_NUMERIC_LIMITS -- Performing Test BALL_HAS_NUMERIC_LIMITS - Success -- Looking for C++ include regex.h -- Looking for C++ include regex.h - found -- Looking for C++ include netinet/in.h -- Looking for C++ include netinet/in.h - found -- Looking for C++ include netdb.h -- Looking for C++ include netdb.h - found -- Performing Test BALL_HAS_MODE_T -- Performing Test BALL_HAS_MODE_T - Success -- Looking for C++ include sstream -- Looking for C++ include sstream - found -- Looking for C++ include ieeefp.h -- Looking for C++ include ieeefp.h - not found -- Looking for C++ include values.h -- Looking for C++ include values.h - found -- Looking for kill -- Looking for kill - found -- Looking for sysconf -- Looking for sysconf - found -- Performing Test BALL_HAS_ANSI_IOSTREAM -- Performing Test BALL_HAS_ANSI_IOSTREAM - Success -- Performing Test BALL_HAS_INLINE_TPL_ARGS -- Performing Test BALL_HAS_INLINE_TPL_ARGS - Success -- Checking for unordered_map -- Looking for C++ include tr1/unordered_map -- Looking for C++ include tr1/unordered_map - found -- Performing Test BALL_HAS_TR1_UNORDERED_MAP -- Performing Test BALL_HAS_TR1_UNORDERED_MAP - Success -- Checking for unordered_map - Found as ! -- Looking for vsnprintf -- Looking for vsnprintf - found -- [GCC only] STL debug mode: OFF -- Looking for C++ include rpc/types.h -- Looking for C++ include rpc/types.h - found -- Performing Test XDR_HAS_RPC_XDR_H -- Performing Test XDR_HAS_RPC_XDR_H - Success -- Looking for xdr_int -- Looking for xdr_int - found -- Looking for xdr_u_hyper -- Looking for xdr_u_hyper - found -- Looking for 64-bit XDR type (for xdr_u_hyper) -- Performing Test XDR_64Bit_Type -- Performing Test XDR_64Bit_Type - Success -- Checking for xdrrec_create signature -- Performing Test BALL_XDRREC_CREATE_CHAR_CHAR_INT -- Performing Test BALL_XDRREC_CREATE_CHAR_CHAR_INT - Success -- Using GSL from /usr -- Falling back to double complex precision -- Falling back to long double complex precision -- Could NOT find LPSolve (missing: LPSOLVE_LIBRARIES LPSOLVE_INCLUDE_PATH LPSOLVE_LINKS) -- Looking for Q_WS_X11 -- Looking for Q_WS_X11 - found -- Looking for Q_WS_WIN -- Looking for Q_WS_WIN - not found. -- Looking for Q_WS_QWS -- Looking for Q_WS_QWS - not found. -- Looking for Q_WS_MAC -- Looking for Q_WS_MAC - not found. -- Found Qt-Version 4.7.2 (using /usr/bin/qmake) -- QT qmake at /usr/bin/qmake -- QT moc at /usr/bin/moc-qt4 -- QT uic at /usr/bin/uic-qt4 -- Looking for XOpenDisplay in /usr/lib/arm-linux-gnueabi/libX11.so;/usr/lib/arm-linux-gnueabi/libXext.so -- Looking for XOpenDisplay in /usr/lib/arm-linux-gnueabi/libX11.so;/usr/lib/arm-linux-gnueabi/libXext.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Looking for IceConnectionNumber in ICE -- Looking for IceConnectionNumber in ICE - found -- Found X11: /usr/lib/arm-linux-gnueabi/libX11.so -- Found PythonInterp: /usr/bin/python2.7 -- Found PythonLibs: /usr/lib/libpython2.7.so -- Found SIP: /usr/bin/sip -- Found Doxygen: /usr/bin/doxygen CMake Warning at cmake/BALLTargets.cmake:1 (MESSAGE): TODO: Implement! Call Stack (most recent call first): CMakeLists.txt:552 (INCLUDE) -- -- ----------------------------------------------------------------- -- -- You have successfully configured BALL. -- -- For a full list of make targets execute: -- 'make targets' -- -- ----------------------------------------------------------------- -- -- Configuring done -- Generating done -- Build files have been written to: /build/buildd/ball-1.3.2/build touch configure-stamp dh_testdir bash debian/debian-ball-install build build make[1]: Entering directory `/build/buildd/ball-1.3.2/build' make[2]: Entering directory `/build/buildd/ball-1.3.2/build' make[2]: Entering directory `/build/buildd/ball-1.3.2/build' make[3]: Entering directory `/build/buildd/ball-1.3.2/build' make[3]: Circular source/FORMAT/GAMESSDatParserParser.C <- source/FORMAT/GAMESSDatParserParser.C dependency dropped. make[3]: Entering directory `/build/buildd/ball-1.3.2/build' make[4]: Entering directory `/build/buildd/ball-1.3.2/build' [FLEX][smartsParserLexer] Building scanner with flex 2.5.35 Scanning dependencies of target doc make[4]: Leaving directory `/build/buildd/ball-1.3.2/build' make[4]: Entering directory `/build/buildd/ball-1.3.2/build' libball1.3-doc ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Creating html documentation [BISON][GAMESSDatParserParser] Building parser with bison 2.4.1 source/FORMAT/GAMESSDatParserParser.y: conflicts: 3 shift/reduce make[3]: Circular source/KERNEL/expressionParserParser.C <- source/KERNEL/expressionParserParser.C dependency dropped. [FLEX][GAMESSDatParserLexer] Building scanner with flex 2.5.35 [BISON][expressionParserParser] Building parser with bison 2.4.1 make[3]: Circular source/MATHS/parsedFunctionParser.C <- source/MATHS/parsedFunctionParser.C dependency dropped. [FLEX][expressionParserLexer] Building scanner with flex 2.5.35 [BISON][parsedFunctionParser] Building parser with bison 2.4.1 make[3]: Circular source/MOLMEC/AMBER/GAFFCESParserParser.C <- source/MOLMEC/AMBER/GAFFCESParserParser.C dependency dropped. [FLEX][parsedFunctionLexer] Building scanner with flex 2.5.35 [BISON][GAFFCESParserParser] Building parser with bison 2.4.1 make[3]: Circular source/STRUCTURE/smilesParserParser.C <- source/STRUCTURE/smilesParserParser.C dependency dropped. [FLEX][GAFFCESParserLexer] Building scanner with flex 2.5.35 [BISON][smilesParserParser] Building parser with bison 2.4.1 make[3]: Circular source/STRUCTURE/smartsParserParser.C <- source/STRUCTURE/smartsParserParser.C dependency dropped. [FLEX][smilesParserLexer] Building scanner with flex 2.5.35 [BISON][smartsParserParser] Building parser with bison 2.4.1 source/STRUCTURE/smartsParserParser.y: conflicts: 26 shift/reduce Scanning dependencies of target BALL make[3]: Leaving directory `/build/buildd/ball-1.3.2/build' make[3]: Entering directory `/build/buildd/ball-1.3.2/build' Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/autoDeletable.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/composite.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/embeddable.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/enumerator.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/factory.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/object.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/objectCreator.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/qthread.h:45, from /build/buildd/ball-1.3.2/include/BALL/SYSTEM/networking.h:24, from /build/buildd/ball-1.3.2/include/BALL/CONCEPT/objectCreator.h:24, from /build/buildd/ball-1.3.2/source/CONCEPT/objectCreator.C:6: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/moleculeObjectCreator.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/qthread.h:45, from /build/buildd/ball-1.3.2/include/BALL/SYSTEM/networking.h:24, from /build/buildd/ball-1.3.2/include/BALL/CONCEPT/objectCreator.h:24, from /build/buildd/ball-1.3.2/include/BALL/CONCEPT/moleculeObjectCreator.h:10, from /build/buildd/ball-1.3.2/source/CONCEPT/moleculeObjectCreator.C:6: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/persistenceManager.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/preferencesObject.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/QObject:1, from /build/buildd/ball-1.3.2/include/BALL/CONCEPT/preferencesObject.h:8, from /build/buildd/ball-1.3.2/source/CONCEPT/preferencesObject.C:1: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/processor.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/property.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/selectable.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/textPersistenceManager.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/timeStamp.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/visitor.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/molecularInformation.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/XDRPersistenceManager.o Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/client.o This is pdfTeX, Version 3.1415926-1.40.10 (TeX Live 2009/Debian) entering extended mode (./_formulas.tex LaTeX2e <2009/09/24> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/graphics/epsfig.sty (/usr/share/texmf-texlive/tex/latex/graphics/graphicx.sty (/usr/share/texmf-texlive/tex/latex/graphics/keyval.sty) (/usr/share/texmf-texlive/tex/latex/graphics/graphics.sty (/usr/share/texmf-texlive/tex/latex/graphics/trig.sty) (/etc/texmf/tex/latex/config/graphics.cfg) (/usr/share/texmf-texlive/tex/latex/graphics/dvips.def)))) No file _formulas.aux. [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] LaTeX Warning: Command \r invalid in math mode on input line 59. [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] LaTeX Warning: Command \r invalid in math mode on input line 152. [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] LaTeX Warning: Command \r invalid in math mode on input line 263. [87] LaTeX Warning: Command \r invalid in math mode on input line 266. [88] [89] [90] [91] [92] [93] (./_formulas.aux) ) Output written on _formulas.dvi (93 pages, 13508 bytes). Transcript written on _formulas.log. In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/qthread.h:45, from /build/buildd/ball-1.3.2/include/BALL/SYSTEM/networking.h:24, from /build/buildd/ball-1.3.2/include/BALL/CONCEPT/client.h:19, from /build/buildd/ball-1.3.2/source/CONCEPT/client.C:7: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/BALL.dir/source/COMMON/constants.o Building CXX object CMakeFiles/BALL.dir/source/COMMON/exception.o Building CXX object CMakeFiles/BALL.dir/source/COMMON/hash.o Building CXX object CMakeFiles/BALL.dir/source/COMMON/init.o Building CXX object CMakeFiles/BALL.dir/source/COMMON/logStream.o Building CXX object CMakeFiles/BALL.dir/source/COMMON/rtti.o Building CXX object CMakeFiles/BALL.dir/source/COMMON/version.o Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/bitVector.o Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/string.o In file included from /usr/include/qt4/QtCore/QString:1:0, from /build/buildd/ball-1.3.2/source/DATATYPE/string.C:10: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/hashGrid.o Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/options.o Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularExpression.o Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/contourSurface.o ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ The documentation has been successfully created. You can now open 'doc/html/index.html' in a web browser. make[4]: Leaving directory `/build/buildd/ball-1.3.2/build' Built target doc make[3]: Leaving directory `/build/buildd/ball-1.3.2/build' make[2]: Leaving directory `/build/buildd/ball-1.3.2/build' Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData1D.o Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData2D.o Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData3D.o Building CXX object CMakeFiles/BALL.dir/source/ENERGY/atomicContactEnergy.o Building CXX object CMakeFiles/BALL.dir/source/ENERGY/composedEnergyProcessor.o Building CXX object CMakeFiles/BALL.dir/source/ENERGY/coulomb.o Building CXX object CMakeFiles/BALL.dir/source/ENERGY/distanceCoulomb.o Building CXX object CMakeFiles/BALL.dir/source/ENERGY/energyProcessor.o Building CXX object CMakeFiles/BALL.dir/source/FORMAT/bruker1DFile.o /build/buildd/ball-1.3.2/source/FORMAT/bruker1DFile.C: In copy constructor 'BALL::Bruker1DFile::Bruker1DFile(const BALL::Bruker1DFile&)': /build/buildd/ball-1.3.2/source/FORMAT/bruker1DFile.C:35:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor /build/buildd/ball-1.3.2/source/FORMAT/bruker1DFile.C: In member function 'void BALL::Bruker1DFile::read()': /build/buildd/ball-1.3.2/source/FORMAT/bruker1DFile.C:65:56: warning: dereferencing type-punned pointer will break strict-aliasing rules Building CXX object CMakeFiles/BALL.dir/source/FORMAT/bruker2DFile.o /build/buildd/ball-1.3.2/source/FORMAT/bruker2DFile.C: In copy constructor 'BALL::Bruker2DFile::Bruker2DFile(const BALL::Bruker2DFile&)': /build/buildd/ball-1.3.2/source/FORMAT/bruker2DFile.C:34:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor /build/buildd/ball-1.3.2/source/FORMAT/bruker2DFile.C: In member function 'void BALL::Bruker2DFile::read()': /build/buildd/ball-1.3.2/source/FORMAT/bruker2DFile.C:67:55: warning: dereferencing type-punned pointer will break strict-aliasing rules Building CXX object CMakeFiles/BALL.dir/source/FORMAT/DCDFile.o /build/buildd/ball-1.3.2/source/FORMAT/DCDFile.C: In copy constructor 'BALL::DCDFile::DCDFile(const BALL::DCDFile&)': /build/buildd/ball-1.3.2/source/FORMAT/DCDFile.C:35:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor Building CXX object CMakeFiles/BALL.dir/source/FORMAT/DSN6File.o Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatFile.o /build/buildd/ball-1.3.2/source/FORMAT/DSN6File.C: In copy constructor 'BALL::DSN6File::DSN6File(const BALL::DSN6File&)': /build/buildd/ball-1.3.2/source/FORMAT/DSN6File.C:19:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor /build/buildd/ball-1.3.2/source/FORMAT/GAMESSDatFile.C: In copy constructor 'BALL::GAMESSDatFile::GAMESSDatFile(const BALL::GAMESSDatFile&)': /build/buildd/ball-1.3.2/source/FORMAT/GAMESSDatFile.C:28:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor /build/buildd/ball-1.3.2/source/FORMAT/GAMESSDatFile.C: At global scope: /build/buildd/ball-1.3.2/source/FORMAT/GAMESSDatFile.C:176:7: warning: unused parameter 'charge' Building CXX object CMakeFiles/BALL.dir/source/FORMAT/genericMolFile.o /build/buildd/ball-1.3.2/source/FORMAT/genericMolFile.C: In copy constructor 'BALL::GenericMolFile::GenericMolFile(const BALL::GenericMolFile&)': /build/buildd/ball-1.3.2/source/FORMAT/genericMolFile.C:25:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor Building CXX object CMakeFiles/BALL.dir/source/FORMAT/HINFile.o Building CXX object CMakeFiles/BALL.dir/source/FORMAT/INIFile.o /build/buildd/ball-1.3.2/source/FORMAT/HINFile.C: In copy constructor 'BALL::HINFile::HINFile(const BALL::HINFile&)': /build/buildd/ball-1.3.2/source/FORMAT/HINFile.C:46:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor Building CXX object CMakeFiles/BALL.dir/source/FORMAT/JCAMPFile.o /build/buildd/ball-1.3.2/source/FORMAT/JCAMPFile.C: In copy constructor 'BALL::JCAMPFile::JCAMPFile(const BALL::JCAMPFile&)': /build/buildd/ball-1.3.2/source/FORMAT/JCAMPFile.C:39:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor Building CXX object CMakeFiles/BALL.dir/source/FORMAT/KCFFile.o Building CXX object CMakeFiles/BALL.dir/source/FORMAT/lineBasedFile.o /build/buildd/ball-1.3.2/source/FORMAT/lineBasedFile.C: In copy constructor 'BALL::LineBasedFile::LineBasedFile(const BALL::LineBasedFile&)': /build/buildd/ball-1.3.2/source/FORMAT/lineBasedFile.C:24:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor /build/buildd/ball-1.3.2/source/FORMAT/KCFFile.C: In copy constructor 'BALL::KCFFile::KCFFile(const BALL::KCFFile&)': /build/buildd/ball-1.3.2/source/FORMAT/KCFFile.C:41:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOLFile.o /build/buildd/ball-1.3.2/source/FORMAT/MOLFile.C: In copy constructor 'BALL::MOLFile::MOLFile(const BALL::MOLFile&)': /build/buildd/ball-1.3.2/source/FORMAT/MOLFile.C:75:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor Building CXX object CMakeFiles/BALL.dir/source/FORMAT/SDFile.o /build/buildd/ball-1.3.2/source/FORMAT/SDFile.C: In copy constructor 'BALL::SDFile::SDFile(const BALL::SDFile&)': /build/buildd/ball-1.3.2/source/FORMAT/SDFile.C:29:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOL2File.o Building CXX object CMakeFiles/BALL.dir/source/FORMAT/NMRStarFile.o /build/buildd/ball-1.3.2/source/FORMAT/MOL2File.C: In copy constructor 'BALL::MOL2File::MOL2File(const BALL::MOL2File&)': /build/buildd/ball-1.3.2/source/FORMAT/MOL2File.C:35:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor /build/buildd/ball-1.3.2/source/FORMAT/NMRStarFile.C: In copy constructor 'BALL::NMRStarFile::NMRStarFile(const BALL::NMRStarFile&)': /build/buildd/ball-1.3.2/source/FORMAT/NMRStarFile.C:168:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor Building CXX object CMakeFiles/BALL.dir/source/FORMAT/parameters.o Building CXX object CMakeFiles/BALL.dir/source/FORMAT/parameterSection.o Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBdefs.o Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBFileGeneral.o /build/buildd/ball-1.3.2/source/FORMAT/PDBFileGeneral.C: In copy constructor 'BALL::PDBFile::PDBFile(const BALL::PDBFile&)': /build/buildd/ball-1.3.2/source/FORMAT/PDBFileGeneral.C:122:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBFileDetails.o Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBInfo.o Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBRecords.o Building CXX object CMakeFiles/BALL.dir/source/FORMAT/resourceFile.o /build/buildd/ball-1.3.2/source/FORMAT/resourceFile.C: In copy constructor 'BALL::ResourceFile::ResourceFile(const BALL::ResourceFile&)': /build/buildd/ball-1.3.2/source/FORMAT/resourceFile.C:646:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor Building CXX object CMakeFiles/BALL.dir/source/FORMAT/trajectoryFile.o Building CXX object CMakeFiles/BALL.dir/source/FORMAT/TRRFile.o /build/buildd/ball-1.3.2/source/FORMAT/trajectoryFile.C: In copy constructor 'BALL::TrajectoryFile::TrajectoryFile(const BALL::TrajectoryFile&)': /build/buildd/ball-1.3.2/source/FORMAT/trajectoryFile.C:23:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor /build/buildd/ball-1.3.2/source/FORMAT/TRRFile.C: In copy constructor 'BALL::TRRFile::TRRFile(const BALL::TRRFile&)': /build/buildd/ball-1.3.2/source/FORMAT/TRRFile.C:32:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor Building CXX object CMakeFiles/BALL.dir/source/FORMAT/XYZFile.o /build/buildd/ball-1.3.2/source/FORMAT/XYZFile.C: In copy constructor 'BALL::XYZFile::XYZFile(const BALL::XYZFile&)': /build/buildd/ball-1.3.2/source/FORMAT/XYZFile.C:34:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor Building CXX object CMakeFiles/BALL.dir/source/FORMAT/SCWRLRotamerFile.o Building CXX object CMakeFiles/BALL.dir/source/FORMAT/molFileFactory.o /build/buildd/ball-1.3.2/source/FORMAT/SCWRLRotamerFile.C: In copy constructor 'BALL::SCWRLRotamerFile::SCWRLRotamerFile(const BALL::SCWRLRotamerFile&)': /build/buildd/ball-1.3.2/source/FORMAT/SCWRLRotamerFile.C:19:3: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor make[3]: Circular source/FORMAT/GAMESSDatParserParser.C <- source/FORMAT/GAMESSDatParserParser.C dependency dropped. Building CXX object CMakeFiles/BALL.dir/source/FORMAT/DBInterface.o Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserParser.o /build/buildd/ball-1.3.2/build/source/FORMAT/GAMESSDatParserParser.C: In function 'int GAMESSDatParserparse()': /build/buildd/ball-1.3.2/build/source/FORMAT/GAMESSDatParserParser.C:1631:35: warning: deprecated conversion from string constant to 'char*' /build/buildd/ball-1.3.2/build/source/FORMAT/GAMESSDatParserParser.C:1774:35: warning: deprecated conversion from string constant to 'char*' source/FORMAT/GAMESSDatParserParser.y: At global scope: source/FORMAT/GAMESSDatParserParser.y:119:6: warning: unused parameter 's' Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserLexer.o /build/buildd/ball-1.3.2/build/source/FORMAT/GAMESSDatParserLexer.C:2447:13: warning: 'void yy_fatal_error(const char*)' defined but not used /build/buildd/ball-1.3.2/build/source/FORMAT/GAMESSDatParserLexer.C:1977:17: warning: 'void yyunput(int, char*)' defined but not used Building CXX object CMakeFiles/BALL.dir/source/KERNEL/atom.o In file included from /usr/include/qt4/QtSql/qsqlrecord.h:45:0, from /build/buildd/ball-1.3.2/include/BALL/FORMAT/DBInterface.h:18, from /build/buildd/ball-1.3.2/source/FORMAT/DBInterface.C:10: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/BALL.dir/source/KERNEL/atomContainer.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/bond.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/chain.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expression.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionPredicate.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionTree.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionParser.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/extractors.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/fragment.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/global.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/molecule.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/nucleicAcid.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/nucleotide.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/PDBAtom.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/predicate.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/protein.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/PTE.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/residue.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/secondaryStructure.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/selector.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/standardPredicates.o make[3]: Circular source/KERNEL/expressionParserParser.C <- source/KERNEL/expressionParserParser.C dependency dropped. Building CXX object CMakeFiles/BALL.dir/source/KERNEL/system.o Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionParserParser.o /build/buildd/ball-1.3.2/build/source/KERNEL/expressionParserParser.C: In function 'int ExpressionParserparse()': /build/buildd/ball-1.3.2/build/source/KERNEL/expressionParserParser.C:1595:35: warning: deprecated conversion from string constant to 'char*' /build/buildd/ball-1.3.2/build/source/KERNEL/expressionParserParser.C:1738:35: warning: deprecated conversion from string constant to 'char*' Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionParserLexer.o /build/buildd/ball-1.3.2/build/source/KERNEL/expressionParserLexer.C:1612:13: warning: 'void yy_fatal_error(const char*)' defined but not used Building CXX object CMakeFiles/BALL.dir/source/MATHS/analyticalGeometry.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/angle.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/box3.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/circle3.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/function.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/line3.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/matrix44.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/parsedFunction.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/plane3.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/piecewiseFunction.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/piecewisePolynomial.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/quaternion.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/randomNumberGenerator.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/simpleBox3.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/sphere3.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/surface.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/vector2.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/vector3.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/vector4.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/FFT1D.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/FFT2D.o make[3]: Circular source/MATHS/parsedFunctionParser.C <- source/MATHS/parsedFunctionParser.C dependency dropped. Building CXX object CMakeFiles/BALL.dir/source/MATHS/FFT3D.o Building CXX object CMakeFiles/BALL.dir/source/MATHS/parsedFunctionParser.o /build/buildd/ball-1.3.2/build/source/MATHS/parsedFunctionParser.C: In function 'int ParsedFunctionparse()': /build/buildd/ball-1.3.2/build/source/MATHS/parsedFunctionParser.C:1499:35: warning: deprecated conversion from string constant to 'char*' /build/buildd/ball-1.3.2/build/source/MATHS/parsedFunctionParser.C:1642:35: warning: deprecated conversion from string constant to 'char*' Building CXX object CMakeFiles/BALL.dir/source/MATHS/parsedFunctionLexer.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amber.o /build/buildd/ball-1.3.2/build/source/MATHS/parsedFunctionLexer.C:1636:13: warning: 'void yy_fatal_error(const char*)' defined but not used Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberBend.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberNonBonded.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberStretch.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberTorsion.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFTypeProcessor.o make[3]: Circular source/MOLMEC/AMBER/GAFFCESParserParser.C <- source/MOLMEC/AMBER/GAFFCESParserParser.C dependency dropped. Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParser.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserParser.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserLexer.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmm.o /build/buildd/ball-1.3.2/build/source/MOLMEC/AMBER/GAFFCESParserLexer.C:1802:13: warning: 'void yy_fatal_error(const char*)' defined but not used /build/buildd/ball-1.3.2/build/source/MOLMEC/AMBER/GAFFCESParserLexer.C:1334:17: warning: 'void yyunput(int, char*)' defined but not used Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmBend.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmImproperTorsion.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmNonBonded.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmStretch.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmTorsion.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/assignTypes.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/atomVector.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/chargeRuleProcessor.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceField.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceFieldComponent.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/gradient.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/periodicBoundary.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/radiusRuleProcessor.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleEvaluator.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleProcessor.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShot.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShotManager.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/support.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typenameRuleProcessor.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typeRuleProcessor.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/energyMinimizer.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/lineSearch.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/steepestDescent.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/strangLBFGS.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/shiftedLVMM.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/conjugateGradient.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/molecularDynamics.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/microCanonicalMD.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/canonicalMD.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94StretchBend.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Torsion.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Parameters.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Processors.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94NonBonded.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/atomTypes.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/charmmEEF1.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/cosineTorsion.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/forceFieldParameters.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/lennardJones.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/potential1210.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticAngleBend.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticBondStretch.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticImproperTorsion.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/residueTorsions.o Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/templates.o Building CXX object CMakeFiles/BALL.dir/source/NMR/anisotropyShiftProcessor.o Building CXX object CMakeFiles/BALL.dir/source/NMR/assignShiftProcessor.o Building CXX object CMakeFiles/BALL.dir/source/NMR/clearShiftProcessor.o Building CXX object CMakeFiles/BALL.dir/source/NMR/EFShiftProcessor.o Building CXX object CMakeFiles/BALL.dir/source/NMR/experiment.o Building CXX object CMakeFiles/BALL.dir/source/NMR/HBondShiftProcessor.o Building CXX object CMakeFiles/BALL.dir/source/NMR/haighMallionShiftProcessor.o Building CXX object CMakeFiles/BALL.dir/source/NMR/createSpectrumProcessor.o Building CXX object CMakeFiles/BALL.dir/source/NMR/peak.o Building CXX object CMakeFiles/BALL.dir/source/NMR/peakList.o Building CXX object CMakeFiles/BALL.dir/source/NMR/shiftModel.o Building CXX object CMakeFiles/BALL.dir/source/NMR/shiftModule.o Building CXX object CMakeFiles/BALL.dir/source/NMR/spectrum.o Building CXX object CMakeFiles/BALL.dir/source/NMR/johnsonBoveyShiftProcessor.o Building CXX object CMakeFiles/BALL.dir/source/NMR/randomCoilShiftProcessor.o Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/BALLPlugin.o In file included from /usr/include/qt4/QtCore/QString:1:0, from /build/buildd/ball-1.3.2/include/BALL/PLUGIN/BALLPlugin.h:8, from /build/buildd/ball-1.3.2/source/PLUGIN/BALLPlugin.C:1: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/pluginManager.o Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/pluginHandler.o In file included from /usr/include/qt4/QtCore/QString:1:0, from /build/buildd/ball-1.3.2/include/BALL/PLUGIN/BALLPlugin.h:8, from /build/buildd/ball-1.3.2/source/PLUGIN/pluginHandler.C:2: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/BALL.dir/source/PYTHON/pyInterpreter.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/QObject:1, from /build/buildd/ball-1.3.2/include/BALL/CONCEPT/preferencesObject.h:8, from /build/buildd/ball-1.3.2/include/BALL/PLUGIN/pluginManager.h:5, from /build/buildd/ball-1.3.2/source/PLUGIN/pluginManager.C:1: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/BALL.dir/source/QSAR/aromaticityProcessor.o Building CXX object CMakeFiles/BALL.dir/source/QSAR/connectivityBase.o Building CXX object CMakeFiles/BALL.dir/source/QSAR/connectivityDescriptors.o Building CXX object CMakeFiles/BALL.dir/source/QSAR/descriptor.o Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeBase.o Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeDescriptors.o Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeProcessor.o Building CXX object CMakeFiles/BALL.dir/source/QSAR/ringPerceptionProcessor.o Building CXX object CMakeFiles/BALL.dir/source/QSAR/simpleBase.o Building CXX object CMakeFiles/BALL.dir/source/QSAR/simpleDescriptors.o Building CXX object CMakeFiles/BALL.dir/source/QSAR/surfaceBase.o /build/buildd/ball-1.3.2/source/QSAR/surfaceBase.C: In member function 'virtual void BALL::SurfaceBase::calculate_(BALL::AtomContainer&)': /build/buildd/ball-1.3.2/source/QSAR/surfaceBase.C:97:3: warning: 'float BALL::calculateSASAtomAreas(const BALL::AtomContainer&, BALL::HashMap&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:349) /build/buildd/ball-1.3.2/source/QSAR/surfaceBase.C:97:47: warning: 'float BALL::calculateSASAtomAreas(const BALL::AtomContainer&, BALL::HashMap&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:349) /build/buildd/ball-1.3.2/source/QSAR/surfaceBase.C:122:16: warning: 'float BALL::calculateSASVolume(const BALL::AtomContainer&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:334) /build/buildd/ball-1.3.2/source/QSAR/surfaceBase.C:122:45: warning: 'float BALL::calculateSASVolume(const BALL::AtomContainer&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:334) Building CXX object CMakeFiles/BALL.dir/source/QSAR/surfaceDescriptors.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/baseFunction.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/linearBaseFunction.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/fermiBaseFunction.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringComponent.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringFunction.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringTypes.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/aromaticRingStacking.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/buriedPolar.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPI.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBond.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/lipophilic.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/nonpolarSolvation.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarSolvation.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/rotationalEntropyLoss.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaals.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickEnergy.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickScore.o Building CXX object CMakeFiles/BALL.dir/source/SCORING/TYPES/fresnoTypes.o Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/claverieParameter.o Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/electrostaticPotentialCalculator.o Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/generalizedBornCase.o Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/molecularSurfaceGrid.o Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/ooiEnergy.o /build/buildd/ball-1.3.2/source/SOLVATION/ooiEnergy.C: In function 'double BALL::calculateOoiEnergy(BALL::AtomContainer&)': /build/buildd/ball-1.3.2/source/SOLVATION/ooiEnergy.C:267:3: warning: 'float BALL::calculateSASAtomAreas(const BALL::AtomContainer&, BALL::HashMap&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:349) /build/buildd/ball-1.3.2/source/SOLVATION/ooiEnergy.C:267:57: warning: 'float BALL::calculateSASAtomAreas(const BALL::AtomContainer&, BALL::HashMap&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:349) Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/PCMCavFreeEnergyProcessor.o Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pierottiCavFreeEnergyProcessor.o /build/buildd/ball-1.3.2/source/SOLVATION/PCMCavFreeEnergyProcessor.C: In member function 'virtual bool BALL::PCMCavFreeEnergyProcessor::finish()': /build/buildd/ball-1.3.2/source/SOLVATION/PCMCavFreeEnergyProcessor.C:128:3: warning: 'float BALL::calculateSASAtomAreas(const BALL::AtomContainer&, BALL::HashMap&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:349) /build/buildd/ball-1.3.2/source/SOLVATION/PCMCavFreeEnergyProcessor.C:128:63: warning: 'float BALL::calculateSASAtomAreas(const BALL::AtomContainer&, BALL::HashMap&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:349) /build/buildd/ball-1.3.2/source/SOLVATION/PCMCavFreeEnergyProcessor.C:131:3: warning: 'float BALL::calculateSASAtomAreas(const BALL::AtomContainer&, BALL::HashMap&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:349) /build/buildd/ball-1.3.2/source/SOLVATION/PCMCavFreeEnergyProcessor.C:131:60: warning: 'float BALL::calculateSASAtomAreas(const BALL::AtomContainer&, BALL::HashMap&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:349) Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pair6_12InteractionEnergyProcessor.o /build/buildd/ball-1.3.2/source/SOLVATION/pierottiCavFreeEnergyProcessor.C: In member function 'virtual bool BALL::PierottiCavFreeEnergyProcessor::finish()': /build/buildd/ball-1.3.2/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:129:3: warning: 'float BALL::calculateSASAtomAreas(const BALL::AtomContainer&, BALL::HashMap&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:349) /build/buildd/ball-1.3.2/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:129:63: warning: 'float BALL::calculateSASAtomAreas(const BALL::AtomContainer&, BALL::HashMap&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:349) Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pair6_12RDFIntegrator.o /build/buildd/ball-1.3.2/source/SOLVATION/pair6_12InteractionEnergyProcessor.C: In member function 'virtual bool BALL::Pair6_12InteractionEnergyProcessor::finish()': /build/buildd/ball-1.3.2/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:352:6: warning: 'float BALL::calculateSASAtomPoints(const BALL::AtomContainer&, std::vector, BALL::TSurface > >&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:386) /build/buildd/ball-1.3.2/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:352:57: warning: 'float BALL::calculateSASAtomPoints(const BALL::AtomContainer&, std::vector, BALL::TSurface > >&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:386) Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pairExpInteractionEnergyProcessor.o /build/buildd/ball-1.3.2/source/SOLVATION/pairExpInteractionEnergyProcessor.C: In member function 'virtual bool BALL::PairExpInteractionEnergyProcessor::finish()': /build/buildd/ball-1.3.2/source/SOLVATION/pairExpInteractionEnergyProcessor.C:266:6: warning: 'float BALL::calculateSASAtomPoints(const BALL::AtomContainer&, std::vector, BALL::TSurface > >&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:386) /build/buildd/ball-1.3.2/source/SOLVATION/pairExpInteractionEnergyProcessor.C:266:57: warning: 'float BALL::calculateSASAtomPoints(const BALL::AtomContainer&, std::vector, BALL::TSurface > >&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:386) Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pairExpRDFIntegrator.o Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/poissonBoltzmann.o Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/reissCavFreeEnergyProcessor.o /build/buildd/ball-1.3.2/source/SOLVATION/reissCavFreeEnergyProcessor.C: In member function 'virtual bool BALL::ReissCavFreeEnergyProcessor::finish()': /build/buildd/ball-1.3.2/source/SOLVATION/reissCavFreeEnergyProcessor.C:137:3: warning: 'float BALL::calculateSASAtomAreas(const BALL::AtomContainer&, BALL::HashMap&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:349) /build/buildd/ball-1.3.2/source/SOLVATION/reissCavFreeEnergyProcessor.C:137:63: warning: 'float BALL::calculateSASAtomAreas(const BALL::AtomContainer&, BALL::HashMap&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:349) Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/solventDescriptor.o Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/solventParameter.o Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/uhligCavFreeEnergyProcessor.o /build/buildd/ball-1.3.2/source/SOLVATION/uhligCavFreeEnergyProcessor.C: In member function 'virtual bool BALL::UhligCavFreeEnergyProcessor::finish()': /build/buildd/ball-1.3.2/source/SOLVATION/uhligCavFreeEnergyProcessor.C:104:14: warning: 'float BALL::calculateSASArea(const BALL::AtomContainer&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:320) /build/buildd/ball-1.3.2/source/SOLVATION/uhligCavFreeEnergyProcessor.C:104:57: warning: 'float BALL::calculateSASArea(const BALL::AtomContainer&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:320) Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/DOCKING/dockResult.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/DOCKING/dockingAlgorithm.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/DOCKING/conformationSet.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/DOCKING/energeticEvaluation.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/DOCKING/forceFieldEvaluation.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/DOCKING/amberEvaluation.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/DOCKING/randomEvaluation.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/DOCKING/geometricFit.o make[2]: Entering directory `/build/buildd/ball-1.3.2/build' make[3]: Entering directory `/build/buildd/ball-1.3.2/build' make[4]: Entering directory `/build/buildd/ball-1.3.2/build' Scanning dependencies of target doc_tutorial make[4]: Leaving directory `/build/buildd/ball-1.3.2/build' make[4]: Entering directory `/build/buildd/ball-1.3.2/build' Build the BALL pdf tutorial ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Creating BALL pdf tutorial This is pdfTeX, Version 3.1415926-1.40.10 (TeX Live 2009/Debian) entering extended mode (./tutorial.tex LaTeX2e <2009/09/24> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size12.clo)) (/usr/share/texmf-texlive/tex/latex/tools/longtable.sty) \@input{macros.aux} (./macros.tex (/usr/share/texmf-texlive/tex/latex/ntgclass/a4.sty) (/usr/share/texmf-texlive/tex/latex/graphics/graphicx.sty (/usr/share/texmf-texlive/tex/latex/graphics/keyval.sty) (/usr/share/texmf-texlive/tex/latex/graphics/graphics.sty (/usr/share/texmf-texlive/tex/latex/graphics/trig.sty) (/etc/texmf/tex/latex/config/graphics.cfg) (/usr/share/texmf-texlive/tex/latex/pdftex-def/pdftex.def))) (/usr/share/texmf-texlive/tex/latex/psnfss/times.sty) (/usr/share/texmf-texlive/tex/latex/misc209/psboxit.sty) (/usr/share/texmf-texlive/tex/latex/base/ifthen.sty) (/usr/share/texmf-texlive/tex/latex/changebar/changebar.sty) (/usr/share/texmf-texlive/tex/latex/graphics/color.sty (/etc/texmf/tex/latex/config/color.cfg)) (/usr/share/texmf-texlive/tex/latex/amsfonts/amsfonts.sty) (/usr/share/texmf-texlive/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texmf-texlive/tex/latex/amsmath/amstext.sty (/usr/share/texmf-texlive/tex/latex/amsmath/amsgen.sty)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsbsy.sty) (/usr/share/texmf-texlive/tex/latex/amsmath/amsopn.sty)) (/usr/share/texmf-texlive/tex/latex/amscls/amsthm.sty) (/usr/share/texmf-texlive/tex/latex/amsfonts/amssymb.sty) (/usr/share/texmf-texlive/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texmf-texlive/tex/latex/fancybox/fancybox.sty Style option: `fancybox' v1.3 <2000/09/19> (tvz) ) (/usr/share/texmf-texlive/tex/latex/tools/xspace.sty) (/usr/share/texmf-texlive/tex/latex/base/makeidx.sty) (/usr/share/texmf-texlive/tex/latex/listings/listings.sty (/usr/share/texmf-texlive/tex/latex/listings/lstmisc.sty) (/usr/share/texmf-texlive/tex/latex/listings/listings.cfg)) (/usr/share/texmf-texlive/tex/latex/listings/lstlang1.sty) (/usr/share/texmf-texlive/tex/latex/listings/lstlang1.sty) (/usr/share/texmf-texlive/tex/latex/listings/lstlang1.sty) (/usr/share/texmf-texlive/tex/latex/listings/lstmisc.sty)) Writing index file tutorial.idx No file tutorial.aux. (/usr/share/texmf-texlive/tex/latex/psnfss/ot1ptm.fd) (/usr/share/texmf-texlive/tex/context/base/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texmf-texlive/tex/latex/amsfonts/umsa.fd) (/usr/share/texmf-texlive/tex/latex/amsfonts/umsb.fd) Overfull \hbox (49.53178pt too wide) in paragraph at lines 29--29 [][] [1 Non-PDF special ignored!{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map} <./ logo.pdf>] [2] No file tutorial.toc. [3] \sffamily 1. (/usr/share/texmf-texlive/tex/latex/psnfss/ot1phv.fd) [1] (./introduction.tex LaTeX Warning: Citation `BALL-RM' on page 2 undefined on input line 11. LaTeX Warning: Citation `BKL99a' on page 2 undefined on input line 14. LaTeX Warning: Citation `BKL99b' on page 2 undefined on input line 14. LaTeX Warning: Citation `KL99' on page 2 undefined on input line 14. LaTeX Warning: Citation `Koh2001' on page 2 undefined on input line 14. LaTeX Warning: Citation `KL2000' on page 2 undefined on input line 14. 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LaTeX Warning: Citation `BBO+83' on page 3 undefined on input line 81. LaTeX Warning: Citation `MMFF94a' on page 3 undefined on input line 82. LaTeX Warning: Citation `MMFF94b' on page 3 undefined on input line 82. LaTeX Warning: Citation `MMFF94c' on page 3 undefined on input line 82. LaTeX Warning: Citation `MMFF94d' on page 3 undefined on input line 82. LaTeX Warning: Citation `MMFF94e' on page 3 undefined on input line 82. LaTeX Warning: Citation `ZVC+97' on page 3 undefined on input line 92. LaTeX Warning: Citation `OpenGL' on page 3 undefined on input line 100. LaTeX Warning: Citation `QT' on page 3 undefined on input line 100. Underfull \vbox (badness 1092) has occurred while \output is active [3 <./BALL_ structure.pdf>] LaTeX Warning: Citation `Python' on page 4 undefined on input line 104. LaTeX Warning: Reference `chapter:python' on page 4 undefined on input line 113 . ) [4] \sffamily 2. [5] (./installation.tex LaTeX Warning: Citation `boost' on page 6 undefined on input line 21. Underfull \hbox (badness 10000) in paragraph at lines 25--28 []\OT1/ptm/m/n/12 The com-pi-la-tion of the vi-su-al-iza-tion com-po-nent VIEW also re- Underfull \hbox (badness 10000) in paragraph at lines 25--28 \OT1/ptm/m/n/12 quires the Qt li-brary (at least ver-sion 4.3), which is avail- able from LaTeX Warning: Reference `section:building-ball' on page 6 undefined on input l ine 33. LaTeX Warning: Citation `OpenGL' on page 6 undefined on input line 36. LaTeX Warning: Citation `Mesa' on page 6 undefined on input line 37. Underfull \hbox (badness 5622) in paragraph at lines 48--53 []\OT1/ptm/m/n/12 If your ma-chine has a graph-ics ac-cel-er-a-tor from In-tel, ATI-AMD or Underfull \hbox (badness 4378) in paragraph at lines 48--53 \OT1/ptm/m/n/12 NVidia, you can use the vendor-provided OpenGL drivers. The re- spec- Underfull \hbox (badness 2913) in paragraph at lines 48--53 \OT1/ptm/m/n/12 (In-tel), [] (ATI-AMD), and LaTeX Warning: Citation `SIP' on page 6 undefined on input line 58. Underfull \hbox (badness 3168) in paragraph at lines 54--60 \OT1/ptm/m/n/12 ing lan-guage), []you will also need Python (ver-sion 2.5 or ab ove) in-stalled [6] LaTeX Warning: Citation `FFTW' on page 7 undefined on input line 61. LaTeX Warning: Reference `requirements' on page 7 undefined on input line 96. LaTeX Warning: Reference `table:options' on page 7 undefined on input line 118. Underfull \hbox (badness 1033) in paragraph at lines 113--121 \OT1/ptm/m/n/12 and then cre-ates the nec-es-sary con-fig-u-ra-tion files ([][] , [][], Underfull \hbox (badness 1043) in paragraph at lines 185--188 \OT1/ptm/m/n/12 face com-piler (uic, typ-i-cally found in [7] Underfull \vbox (badness 10000) detected at line 194 Underfull \hbox (badness 2582) in paragraph at lines 209--220 \OT1/ptm/m/n/12 ex-e-cutable in EXE. 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[14] [15] LaTeX Warning: Citation `HyperChem' on page 16 undefined on input line 219. [16] [17 <./tut1_screenshot.pdf>] LaTeX Warning: Reference `fig:tut1-screenshot' on page 18 undefined on input li ne 251. LaTeX Warning: Reference `lst:tutorial1' on page 18 undefined on input line 255 . LaTeX Warning: Reference `lst:tutorial1' on page 18 undefined on input line 256 . Underfull \hbox (badness 1418) in paragraph at lines 254--258 \OT1/ptm/m/n/12 The com-plete file is shown in List-ing [] on Page [] and can b e found in Underfull \hbox (badness 3354) in paragraph at lines 259--266 []\OT1/ptm/m/n/12 First, we have to in-clude [][] as we use \OT1/pcr/m/n/12 cou t \OT1/ptm/m/n/12 and \OT1/pcr/m/n/12 endl \OT1/ptm/m/n/12 to Underfull \hbox (badness 3977) in paragraph at lines 259--266 \OT1/ptm/m/n/12 print some text. Then, we have to in-clude the head-ers for the BALL Underfull \hbox (badness 2809) in paragraph at lines 259--266 \OT1/ptm/m/n/12 ker-nel classes \OT1/pcr/m/n/12 Atom[][]\OT1/ptm/m/n/12 , \OT1/ pcr/m/n/12 Bond[][]\OT1/ptm/m/n/12 , \OT1/pcr/m/n/12 Molecule[][]\OT1/ptm/m/n/1 2 , \OT1/pcr/m/n/12 System[][]\OT1/ptm/m/n/12 , and \OT1/pcr/m/n/12 PTE[][]\OT1 /ptm/m/n/12 . The head-ers Underfull \hbox (badness 2809) in paragraph at lines 259--266 \OT1/ptm/m/n/12 for the Hy-per-Chem file sup-port are found in the di-rec-tory [][] Underfull \hbox (badness 7704) in paragraph at lines 259--266 \OT1/ptm/m/n/12 and the head-ers for the \OT1/pcr/m/n/12 TranslationProcessor[] [] \OT1/ptm/m/n/12 class are found in LaTeX Warning: Reference `fig:tut1-screenshot' on page 18 undefined on input li ne 289. [18] Underfull \vbox (badness 10000) has occurred while \output is active [19]) [20] (./example2.tex LaTeX Warning: Citation `PDB' on page 21 undefined on input line 5. LaTeX Warning: Reference `useofstreams' on page 21 undefined on input line 22. [21]) Underfull \hbox (badness 3209) in paragraph at lines 99--54 []\OT1/ptm/m/n/12 The source code for this ex-am-ple can be found as \OT1/pcr/m /n/12 tutorial2.C \OT1/ptm/m/n/12 in [22] (./example3.tex (/usr/share/texmf-texlive/tex/latex/psnfss/omsptm.fd) [23] LaTeX Warning: Citation `AMBER95' on page 24 undefined on input line 84. Underfull \hbox (badness 1286) in paragraph at lines 127--134 \OT1/ptm/m/n/12 An en-ergy min-i-miza-tion of those hy-dro-gens is done us-ing the \OT1/pcr/m/n/12 Conjugate- [24] LaTeX Warning: Reference `section:kernelclasses' on page 25 undefined on input line 167. [25]) [26] \sffamily 4. [27] (./foundation-classes.tex) Underfull \hbox (badness 1189) in paragraph at lines 20--59 \OT1/ptm/m/n/12 overview of their ba-sics in the fol-low-ing sec-tions. How-eve r, the to-tal num- [28] (./example4.tex Overfull \hbox (13.43938pt too wide) in paragraph at lines 12--13 [][][][][][][][][][][][][][][][][][][][][][][][][] Underfull \hbox (badness 2035) in paragraph at lines 60--67 \OT1/ptm/m/n/12 This rule would then ex-pand the name \OT1/pcr/m/n/12 PDB://4pt i \OT1/ptm/m/n/12 to the lo-cal copy in Underfull \hbox (badness 1565) in paragraph at lines 60--67 \OT1/pcr/m/n/12 /local/PDB/structures/all/pdb/pdb4pti.ent\OT1/ptm/m/n/12 . In t he above rule, [29]) [30] (./example5.tex LaTeX Warning: Citation `BALL-RM' on page 31 undefined on input line 12. [31] [32] [33]) [34] \sffamily 5. [35] (./kernel.tex LaTeX Warning: Reference `figure:problem-domain' on page 36 undefined on input line 7. LaTeX Warning: Citation `DesignPatterns' on page 36 undefined on input line 10. LaTeX Warning: Reference `figure:kernel-frameworks' on page 36 undefined on inp ut line 17. LaTeX Warning: Reference `section:molecularframework' on page 36 undefined on i nput line 20. LaTeX Warning: Reference `section:nucleicacidframework' on page 36 undefined on input line 21. LaTeX Warning: Reference `section:iterators' on page 36 undefined on input line 26. [36 <./problem-domain.pdf>] [37 <./kernel-data -structures.pdf>] [38]) [39] \sffamily 6. [40] (./view.tex LaTeX Warning: Reference `message' on page 41 undefined on input line 43. [41] LaTeX Warning: Reference `table:tmw' on page 42 undefined on input line 63. [42] LaTeX Warning: Reference `designer' on page 43 undefined on input line 151. [43] [44] [45] [46] [47] [48] [49] LaTeX Warning: Reference `tab:messages' on page 50 undefined on input line 519. LaTeX Warning: Reference `onNotify' on page 50 undefined on input line 548. [50] LaTeX Warning: Reference `tab:go' on page 51 undefined on input line 572. LaTeX Warning: Reference `renderer' on page 51 undefined on input line 603. [51] LaTeX Warning: Reference `fig:representation' on page 52 undefined on input lin e 613. Underfull \hbox (badness 10000) in paragraph at lines 648--648 \OT1/phv/m/n/10.95 Figure 6.1: \OT1/ptm/m/it/10.95 Each vi-su-al-ized ob-ject c or-re-sponds to an in-stance of the class [52] [53 <./representation.pdf>] Underfull \vbox (badness 1173) has occurred while \output is active [54] [55] Overfull \hbox (31.43956pt too wide) in paragraph at lines 791--792 [][][][][][][][][][][][][][][][][][][][][] [56] [57] [58] [59] Underfull \hbox (badness 10000) in paragraph at lines 1062--1064 []\OT1/ptm/m/n/12 The method \OT1/pcr/m/n/12 GLRenderer::-render-Cross[](const Cross& cross)[][] [60]) [61] \sffamily 7. [62] (./python.tex LaTeX Warning: Citation `Python' on page 63 undefined on input line 3. LaTeX Warning: Citation `SIP' on page 63 undefined on input line 17. Underfull \hbox (badness 1360) in paragraph at lines 17--23 []\OT1/ptm/m/n/12 BALL re-lies on SIP [[]] []ver-sion 4.6.0 to trans-late its c lass head-ers semi- [63] LaTeX Warning: Citation `SIP' on page 64 undefined on input line 101. Underfull \hbox (badness 10000) in paragraph at lines 100--110 \OT1/ptm/m/n/12 Download, con-fig-ure, and in-stall the SIP[] ver-sion 4.6.0 or later from Underfull \hbox (badness 1577) in paragraph at lines 100--110 [] \OT1/ptm/m/n/12 or from [[]]. Run Underfull \hbox (badness 10000) in paragraph at lines 119--122 \OT1/ptm/m/n/12 After con-fig-ur-ing and build-ing BALL, you should then change to [64] Underfull \hbox (badness 10000) in paragraph at lines 130--136 \OT1/ptm/m/n/12 in or-der to build the Python bind-ings, which are then in-stal led to ) [65] \sffamily 8. [66] (./faq.tex Underfull \hbox (badness 10000) in paragraph at lines 78--1 [67 Non-PDF special ignored! Non-PDF special ignored!]) [68 Non-PDF special ignored!] [69] No file tutorial.ind. No file tutorial.bbl. (./tutorial.aux (./introduction.aux) (./installation.aux) (./testing.aux) (./building-python.aux) (./example1.aux) (./example2.aux) (./example3.aux) (./foundation-classes.aux) (./example4.aux) (./example5.aux) (./kernel.aux) (./view.aux) (./python.aux)) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information){/usr/share/texmf-texlive/f onts/enc/dvips/base/8r.enc} Output written on tutorial.pdf (72 pages, 475199 bytes). Transcript written on tutorial.log. This is BibTeX, Version 0.99c (TeX Live 2009/Debian) The top-level auxiliary file: tutorial.aux A level-1 auxiliary file: introduction.aux A level-1 auxiliary file: installation.aux A level-1 auxiliary file: testing.aux A level-1 auxiliary file: building-python.aux A level-1 auxiliary file: example1.aux A level-1 auxiliary file: example2.aux A level-1 auxiliary file: example3.aux A level-1 auxiliary file: foundation-classes.aux A level-1 auxiliary file: example4.aux A level-1 auxiliary file: example5.aux A level-1 auxiliary file: kernel.aux A level-1 auxiliary file: view.aux A level-1 auxiliary file: python.aux The style file: abbrv.bst Database file #1: tutorial.bib This is makeindex, version 2.15 [TeX Live 2009] (kpathsea + Thai support). Scanning input file tutorial.idx....done (693 entries accepted, 43 rejected). Sorting entries.........done (7591 comparisons). Generating output file tutorial.ind....done (637 lines written, 0 warnings). Output written in tutorial.ind. Transcript written in tutorial.ilg. This is pdfTeX, Version 3.1415926-1.40.10 (TeX Live 2009/Debian) entering extended mode (./tutorial.tex LaTeX2e <2009/09/24> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size12.clo)) (/usr/share/texmf-texlive/tex/latex/tools/longtable.sty) \@input{macros.aux} (./macros.tex (/usr/share/texmf-texlive/tex/latex/ntgclass/a4.sty) (/usr/share/texmf-texlive/tex/latex/graphics/graphicx.sty (/usr/share/texmf-texlive/tex/latex/graphics/keyval.sty) (/usr/share/texmf-texlive/tex/latex/graphics/graphics.sty (/usr/share/texmf-texlive/tex/latex/graphics/trig.sty) (/etc/texmf/tex/latex/config/graphics.cfg) (/usr/share/texmf-texlive/tex/latex/pdftex-def/pdftex.def))) (/usr/share/texmf-texlive/tex/latex/psnfss/times.sty) (/usr/share/texmf-texlive/tex/latex/misc209/psboxit.sty) (/usr/share/texmf-texlive/tex/latex/base/ifthen.sty) (/usr/share/texmf-texlive/tex/latex/changebar/changebar.sty) (/usr/share/texmf-texlive/tex/latex/graphics/color.sty (/etc/texmf/tex/latex/config/color.cfg)) (/usr/share/texmf-texlive/tex/latex/amsfonts/amsfonts.sty) (/usr/share/texmf-texlive/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texmf-texlive/tex/latex/amsmath/amstext.sty (/usr/share/texmf-texlive/tex/latex/amsmath/amsgen.sty)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsbsy.sty) (/usr/share/texmf-texlive/tex/latex/amsmath/amsopn.sty)) (/usr/share/texmf-texlive/tex/latex/amscls/amsthm.sty) (/usr/share/texmf-texlive/tex/latex/amsfonts/amssymb.sty) (/usr/share/texmf-texlive/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texmf-texlive/tex/latex/fancybox/fancybox.sty Style option: `fancybox' v1.3 <2000/09/19> (tvz) ) (/usr/share/texmf-texlive/tex/latex/tools/xspace.sty) (/usr/share/texmf-texlive/tex/latex/base/makeidx.sty) (/usr/share/texmf-texlive/tex/latex/listings/listings.sty (/usr/share/texmf-texlive/tex/latex/listings/lstmisc.sty) (/usr/share/texmf-texlive/tex/latex/listings/listings.cfg)) (/usr/share/texmf-texlive/tex/latex/listings/lstlang1.sty) (/usr/share/texmf-texlive/tex/latex/listings/lstlang1.sty) (/usr/share/texmf-texlive/tex/latex/listings/lstlang1.sty) (/usr/share/texmf-texlive/tex/latex/listings/lstmisc.sty)) Writing index file tutorial.idx (./tutorial.aux (./introduction.aux) (./installation.aux) (./testing.aux) (./building-python.aux) (./example1.aux) (./example2.aux) (./example3.aux) (./foundation-classes.aux) (./example4.aux) (./example5.aux) (./kernel.aux) (./view.aux) (./python.aux)) (/usr/share/texmf-texlive/tex/latex/psnfss/ot1ptm.fd) (/usr/share/texmf-texlive/tex/context/base/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texmf-texlive/tex/latex/amsfonts/umsa.fd) (/usr/share/texmf-texlive/tex/latex/amsfonts/umsb.fd) Overfull \hbox (49.53178pt too wide) in paragraph at lines 29--29 [][] [1 Non-PDF special ignored!{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map} <./ logo.pdf>] [2] (./tutorial.toc [3]) [4] \sffamily 1. 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Underfull \hbox (badness 10000) in paragraph at lines 25--28 []\OT1/ptm/m/n/12 The com-pi-la-tion of the vi-su-al-iza-tion com-po-nent VIEW also re- Underfull \hbox (badness 10000) in paragraph at lines 25--28 \OT1/ptm/m/n/12 quires the Qt li-brary (at least ver-sion 4.3), which is avail- able from LaTeX Warning: Citation `OpenGL' on page 6 undefined on input line 36. LaTeX Warning: Citation `Mesa' on page 6 undefined on input line 37. Underfull \hbox (badness 5622) in paragraph at lines 48--53 []\OT1/ptm/m/n/12 If your ma-chine has a graph-ics ac-cel-er-a-tor from In-tel, ATI-AMD or Underfull \hbox (badness 4378) in paragraph at lines 48--53 \OT1/ptm/m/n/12 NVidia, you can use the vendor-provided OpenGL drivers. The re- spec- Underfull \hbox (badness 2913) in paragraph at lines 48--53 \OT1/ptm/m/n/12 (In-tel), [] (ATI-AMD), and LaTeX Warning: Citation `SIP' on page 6 undefined on input line 58. Underfull \hbox (badness 3168) in paragraph at lines 54--60 \OT1/ptm/m/n/12 ing lan-guage), []you will also need Python (ver-sion 2.5 or ab ove) in-stalled [6] LaTeX Warning: Citation `FFTW' on page 7 undefined on input line 61. Underfull \hbox (badness 1033) in paragraph at lines 113--121 \OT1/ptm/m/n/12 and then cre-ates the nec-es-sary con-fig-u-ra-tion files ([][] , [][], Underfull \hbox (badness 1043) in paragraph at lines 185--188 \OT1/ptm/m/n/12 face com-piler (uic, typ-i-cally found in [7] Underfull \vbox (badness 10000) detected at line 194 Underfull \hbox (badness 2582) in paragraph at lines 209--220 \OT1/ptm/m/n/12 ex-e-cutable in EXE. If no ex-e-cutable Underfull \hbox (badness 1584) in paragraph at lines 209--220 \OT1/ptm/m/n/12 is spec-i-fied (\OT1/pcr/m/n/12 --with-python \OT1/ptm/m/n/12 o nly), Underfull \hbox (badness 7504) in paragraph at lines 209--220 \OT1/pcr/m/n/12 configure \OT1/ptm/m/n/12 looks for an in-stalled Underfull \hbox (badness 1895) in paragraph at lines 249--251 \OT1/ptm/m/n/12 quired for non-standard in-clude paths [8] [9] [10]) [11] (./testing.tex Underfull \hbox (badness 10000) in paragraph at lines 24--29 \OT1/ptm/m/n/12 For all bug re-ports, please in-clude your sys-tem con-fig-u-ra -tion, the file Underfull \hbox (badness 1755) in paragraph at lines 24--29 [][] \OT1/ptm/m/n/12 (which con-tains the re-sults of tests con-fig-ure per-for med), and ) [12] No file building-python.tex. \sffamily 3. [13] (./example1.tex [14] [15] LaTeX Warning: Citation `HyperChem' on page 16 undefined on input line 219. [16] [17 <./tut1_screenshot.pdf>] Underfull \hbox (badness 1231) in paragraph at lines 254--258 \OT1/ptm/m/n/12 The com-plete file is shown in List-ing 3.1[] on Page 19[] and can be found in Underfull \hbox (badness 3354) in paragraph at lines 259--266 []\OT1/ptm/m/n/12 First, we have to in-clude [][] as we use \OT1/pcr/m/n/12 cou t \OT1/ptm/m/n/12 and \OT1/pcr/m/n/12 endl \OT1/ptm/m/n/12 to Underfull \hbox (badness 3977) in paragraph at lines 259--266 \OT1/ptm/m/n/12 print some text. Then, we have to in-clude the head-ers for the BALL Underfull \hbox (badness 2809) in paragraph at lines 259--266 \OT1/ptm/m/n/12 ker-nel classes \OT1/pcr/m/n/12 Atom[][]\OT1/ptm/m/n/12 , \OT1/ pcr/m/n/12 Bond[][]\OT1/ptm/m/n/12 , \OT1/pcr/m/n/12 Molecule[][]\OT1/ptm/m/n/1 2 , \OT1/pcr/m/n/12 System[][]\OT1/ptm/m/n/12 , and \OT1/pcr/m/n/12 PTE[][]\OT1 /ptm/m/n/12 . The head-ers Underfull \hbox (badness 2809) in paragraph at lines 259--266 \OT1/ptm/m/n/12 for the Hy-per-Chem file sup-port are found in the di-rec-tory [][] Underfull \hbox (badness 7704) in paragraph at lines 259--266 \OT1/ptm/m/n/12 and the head-ers for the \OT1/pcr/m/n/12 TranslationProcessor[] [] \OT1/ptm/m/n/12 class are found in [18] Underfull \vbox (badness 10000) has occurred while \output is active [19]) [20] (./example2.tex LaTeX Warning: Citation `PDB' on page 21 undefined on input line 5. [21]) Underfull \hbox (badness 3209) in paragraph at lines 99--54 []\OT1/ptm/m/n/12 The source code for this ex-am-ple can be found as \OT1/pcr/m /n/12 tutorial2.C \OT1/ptm/m/n/12 in [22] (./example3.tex (/usr/share/texmf-texlive/tex/latex/psnfss/omsptm.fd) [23] LaTeX Warning: Citation `AMBER95' on page 24 undefined on input line 84. 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Boost c++ li-braries, ver-sion 1.35 . Underfull \hbox (badness 10000) in paragraph at lines 139--143 []\OT1/ptm/m/n/12 P. Thomp-son. SIP: A tool for gen-er-at-ing python Underfull \hbox (badness 10000) in paragraph at lines 139--143 \OT1/ptm/m/n/12 bind-ings for C and C++ li-braries, ver-sion 4.7.9. Underfull \hbox (badness 10000) in paragraph at lines 139--143 \OT1/pcr/m/n/12 http://www.riverbankcomputing.co.uk/software/sip/\OT1/ptm/m/n/1 2 , [78]) [79] (./tutorial.aux (./introduction.aux) (./installation.aux) (./testing.aux) (./building-python.aux) (./example1.aux) (./example2.aux) (./example3.aux) (./foundation-classes.aux) (./example4.aux) (./example5.aux) (./kernel.aux) (./view.aux) (./python.aux)) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information){/usr/share/texmf-texlive/f onts/enc/dvips/base/8r.enc} Output written on tutorial.pdf (83 pages, 504656 bytes). Transcript written on tutorial.log. This is pdfTeX, Version 3.1415926-1.40.10 (TeX Live 2009/Debian) entering extended mode (./tutorial.tex LaTeX2e <2009/09/24> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. 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[62] (./python.tex [63] Underfull \hbox (badness 10000) in paragraph at lines 100--110 \OT1/ptm/m/n/12 Download, con-fig-ure, and in-stall the SIP[] ver-sion 4.6.0 or later from Underfull \hbox (badness 10000) in paragraph at lines 119--122 \OT1/ptm/m/n/12 After con-fig-ur-ing and build-ing BALL, you should then change to [64] Underfull \hbox (badness 10000) in paragraph at lines 130--136 \OT1/ptm/m/n/12 in or-der to build the Python bind-ings, which are then in-stal led to ) [65] \sffamily 8. [66] (./faq.tex Underfull \hbox (badness 10000) in paragraph at lines 78--1 [67 Non-PDF special ignored! 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create-Geometric-Objects()\OT1/ptm/m/n/10.95 , Underfull \hbox (badness 10000) in paragraph at lines 105--107 []| \OT1/pcr/m/n/10.95 Extended-Preferences-Object\OT1/ptm/m/n/10.95 , Underfull \hbox (badness 10000) in paragraph at lines 127--128 []| \OT1/pcr/m/n/10.95 initializePreferencesTab\OT1/ptm/m/n/10.95 , Underfull \hbox (badness 10000) in paragraph at lines 138--140 []| \OT1/pcr/m/n/10.95 Main-Control::- Underfull \hbox (badness 10000) in paragraph at lines 138--140 \OT1/pcr/m/n/10.95 insert(Representation&)\OT1/ptm/m/n/10.95 , Underfull \hbox (badness 10000) in paragraph at lines 142--144 []| \OT1/pcr/m/n/10.95 Main-Control::- Underfull \hbox (badness 10000) in paragraph at lines 142--144 \OT1/pcr/m/n/10.95 update(Representation&)\OT1/ptm/m/n/10.95 , Underfull \hbox (badness 10000) in paragraph at lines 150--152 []| \OT1/pcr/m/n/10.95 ModifyRepresentation- Underfull \hbox (badness 10000) in paragraph at lines 156--158 []| \OT1/pcr/m/n/10.95 Modular-Widget::-onNotify()\OT1/ptm/m/n/10.95 , Underfull \hbox (badness 10000) in paragraph at lines 158--160 []| \OT1/pcr/m/n/10.95 Modular-Widget::-write- [71] Underfull \hbox (badness 10000) in paragraph at lines 196--198 []| \OT1/pcr/m/n/10.95 Renderer::-render(const Underfull \hbox (badness 10000) in paragraph at lines 215--217 []| \OT1/pcr/m/n/10.95 Unary-Processor$\OML/cmm/m/it/10.95 <$\OT1/pcr/m/n/10.95 Composite$\OML/cmm/m/it/10.95 >$\OT1/ptm/m/n/10.95 , Underfull \hbox (badness 10000) in paragraph at lines 236--238 []| \OT1/pcr/m/n/10.95 GLRenderer::-render- Underfull \hbox (badness 10000) in paragraph at lines 236--238 \OT1/pcr/m/n/10.95 Cross[](const Cross& Underfull \hbox (badness 10000) in paragraph at lines 245--247 []| \OT1/pcr/m/n/10.95 Renderer::-render- Underfull \hbox (badness 10000) in paragraph at lines 245--247 \OT1/pcr/m/n/10.95 Cross[](const Cross& Underfull \hbox (badness 1142) in paragraph at lines 271--272 []\OT1/pcr/m/n/10.95 BALL/include/BALL/config.h \OT1/ptm/m/n/10.95 (file), Underfull \hbox (badness 10000) in paragraph at lines 272--273 []\OT1/pcr/m/n/10.95 BALL/include/BALL/MOLMEC \OT1/ptm/m/n/10.95 (di-rec- Underfull \hbox (badness 1983) in paragraph at lines 274--275 []\OT1/pcr/m/n/10.95 BALL/source/BENCHMARKS \OT1/ptm/m/n/10.95 (di-rec-tory), [72] Underfull \hbox (badness 10000) in paragraph at lines 300--302 []\OT1/pcr/m/n/10.95 Composite-Message::-NEW[]COMPOSITE Underfull \hbox (badness 10000) in paragraph at lines 302--304 []\OT1/pcr/m/n/10.95 Composite-Message::- Underfull \hbox (badness 10000) in paragraph at lines 302--304 \OT1/pcr/m/n/10.95 REMOVED[]COMPOSITE Underfull \hbox (badness 10000) in paragraph at lines 311--313 []\OT1/pcr/m/n/10.95 Conjugate-Gradient-Minimizer Underfull \hbox (badness 10000) in paragraph at lines 313--315 []\OT1/pcr/m/n/10.95 Control-Selection-Message Underfull \hbox (badness 10000) in paragraph at lines 317--319 []\OT1/pcr/m/n/10.95 create-Geometric-Objects() Underfull \hbox (badness 10000) in paragraph at lines 342--344 []\OT1/pcr/m/n/10.95 options \OT1/ptm/m/n/10.95 (mem-ber of Underfull \hbox (badness 10000) in paragraph at lines 346--348 []\OT1/pcr/m/n/10.95 Extended-Preferences-Object [73] Underfull \hbox (badness 10000) in paragraph at lines 391--393 []\OT1/pcr/m/n/10.95 GLRenderer::-render-Cross[](const Underfull \hbox (badness 10000) in paragraph at lines 404--406 []\OT1/pcr/m/n/10.95 initializePreferencesTab Underfull \hbox (badness 10000) in paragraph at lines 441--443 []\OT1/pcr/m/n/10.95 Main-Control::- Underfull \hbox (badness 10000) in paragraph at lines 441--443 \OT1/pcr/m/n/10.95 insert(Representation&) Underfull \hbox (badness 10000) in paragraph at lines 443--445 []\OT1/pcr/m/n/10.95 Main-Control::-isBusy() Underfull \hbox (badness 10000) in paragraph at lines 445--447 []\OT1/pcr/m/n/10.95 Main-Control::- Underfull \hbox (badness 10000) in paragraph at lines 445--447 \OT1/pcr/m/n/10.95 update(Representation&) Underfull \hbox (badness 10000) in paragraph at lines 459--461 []\OT1/pcr/m/n/10.95 ModifyRepresentation-Dialog Underfull \hbox (badness 10000) in paragraph at lines 463--465 []\OT1/pcr/m/n/10.95 Modular-Widget::-notify[] Underfull \hbox (badness 10000) in paragraph at lines 465--467 []\OT1/pcr/m/n/10.95 Modular-Widget::-onNotify() Underfull \hbox (badness 10000) in paragraph at lines 467--469 []\OT1/pcr/m/n/10.95 Modular-Widget::-write- Underfull \hbox (badness 10000) in paragraph at lines 467--469 \OT1/pcr/m/n/10.95 Preferences \OT1/ptm/m/n/10.95 (BALL class), Underfull \hbox (badness 4229) in paragraph at lines 472--474 []\OT1/pcr/m/n/10.95 Molecular-File-Dialog \OT1/ptm/m/n/10.95 (BALL class), Underfull \hbox (badness 4229) in paragraph at lines 478--480 []\OT1/pcr/m/n/10.95 MolecularFileDialog \OT1/ptm/m/n/10.95 (BALL class), [74] Underfull \hbox (badness 10000) in paragraph at lines 547--549 []\OT1/pcr/m/n/10.95 Renderer::-render(const Underfull \hbox (badness 10000) in paragraph at lines 547--549 \OT1/pcr/m/n/10.95 Representation&) Underfull \hbox (badness 10000) in paragraph at lines 551--553 []\OT1/pcr/m/n/10.95 Renderer::-render-Cross[](const Underfull \hbox (badness 10000) in paragraph at lines 587--589 []\OT1/pcr/m/n/10.95 SnapshotVisualisation Underfull \hbox (badness 10000) in paragraph at lines 611--613 []\OT1/pcr/m/n/10.95 TransformationManager [75] Underfull \hbox (badness 10000) in paragraph at lines 620--622 []\OT1/pcr/m/n/10.95 Unary-Processor$\OML/cmm/m/it/10.95 <$\OT1/pcr/m/n/10.95 C omposite$\OML/cmm/m/it/10.95 >$ [76]) (./tutorial.bbl [77] Underfull \hbox (badness 10000) in paragraph at lines 134--137 []\OT1/ptm/m/n/12 The Boost de-vel-op-ers. Boost c++ li-braries, ver-sion 1.35 . Underfull \hbox (badness 10000) in paragraph at lines 139--143 []\OT1/ptm/m/n/12 P. Thomp-son. SIP: A tool for gen-er-at-ing python Underfull \hbox (badness 10000) in paragraph at lines 139--143 \OT1/ptm/m/n/12 bind-ings for C and C++ li-braries, ver-sion 4.7.9. Underfull \hbox (badness 10000) in paragraph at lines 139--143 \OT1/pcr/m/n/12 http://www.riverbankcomputing.co.uk/software/sip/\OT1/ptm/m/n/1 2 , [78]) [79] (./tutorial.aux (./introduction.aux) (./installation.aux) (./testing.aux) (./building-python.aux) (./example1.aux) (./example2.aux) (./example3.aux) (./foundation-classes.aux) (./example4.aux) (./example5.aux) (./kernel.aux) (./view.aux) (./python.aux)) ) (see the transcript file for additional information){/usr/share/texmf-texlive/f onts/enc/dvips/base/8r.enc} Output written on tutorial.pdf (83 pages, 503715 bytes). Transcript written on tutorial.log. The BALL tutorial in PDF format has been successfully created: doc/tutorial.pdf make[4]: Leaving directory `/build/buildd/ball-1.3.2/build' Built target doc_tutorial make[3]: Leaving directory `/build/buildd/ball-1.3.2/build' make[2]: Leaving directory `/build/buildd/ball-1.3.2/build' Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/addHydrogenProcessor.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/analyticalSES.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/assignBondOrderProcessor.o In file included from /usr/include/qt4/QtCore/qlibraryinfo.h:45:0, from /usr/include/qt4/QtCore/QtCore:6, from /usr/include/qt4/QtXml/QtXml:3, from /build/buildd/ball-1.3.2/source/STRUCTURE/assignBondOrderProcessor.C:21: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/atomBijection.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/atomTyper.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/bindingPocketProcessor.o In file included from /build/buildd/ball-1.3.2/source/STRUCTURE/bindingPocketProcessor.C:1:0: /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/bindingPocketProcessor.h:224:26: warning: unused parameter 'sp' Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/buildBondsProcessor.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/chainBuilder.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/connolly.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/defaultProcessors.o /build/buildd/ball-1.3.2/source/STRUCTURE/connolly.C:34:2: warning: 'BALL::atoms_' defined but not used Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/DNAMutator.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/fragmentDB.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/geometricProperties.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/geometricTransformations.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphEdge.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphFace.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphVertex.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/HBondProcessor.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/hybridisationProcessor.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/kekulizer.o In file included from /usr/include/qt4/QtCore/qlibraryinfo.h:45:0, from /usr/include/qt4/QtCore/QtCore:6, from /usr/include/qt4/QtXml/QtXml:3, from /build/buildd/ball-1.3.2/source/STRUCTURE/hybridisationProcessor.C:19: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/moleculeAssembler.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/molecularGraph.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/numericalSAS.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/peptides.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/peptideBuilder.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/radialDistributionFunction.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/reconstructFragmentProcessor.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFIntegrator.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFParameter.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFSection.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/reducedSurface.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/residueChecker.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/ringAnalyser.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/ringClusterer.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/rsConstructor.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSEdge.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSFace.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSVertex.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASEdge.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASFace.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASVertex.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/sdGenerator.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESEdge.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESFace.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESVertex.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/secondaryStructureProcessor.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParser.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParser.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsMatcher.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/solventAccessibleSurface.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/solventExcludedSurface.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/structureMapper.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/surfaceProcessor.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangle.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangleEdge.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/trianglePoint.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSAS.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSES.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSurface.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/UCK.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/residueRotamerSet.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/rotamerLibrary.o make[3]: Circular source/STRUCTURE/smilesParserParser.C <- source/STRUCTURE/smilesParserParser.C dependency dropped. Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RMSDMinimizer.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserParser.o /build/buildd/ball-1.3.2/build/source/STRUCTURE/smilesParserParser.C: In function 'int SmilesParserparse()': /build/buildd/ball-1.3.2/build/source/STRUCTURE/smilesParserParser.C:1874:35: warning: deprecated conversion from string constant to 'char*' /build/buildd/ball-1.3.2/build/source/STRUCTURE/smilesParserParser.C:2017:35: warning: deprecated conversion from string constant to 'char*' make[3]: Circular source/STRUCTURE/smartsParserParser.C <- source/STRUCTURE/smartsParserParser.C dependency dropped. Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserLexer.o Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserParser.o /build/buildd/ball-1.3.2/build/source/STRUCTURE/smartsParserParser.C: In function 'int SmartsParserparse()': /build/buildd/ball-1.3.2/build/source/STRUCTURE/smartsParserParser.C:2862:35: warning: deprecated conversion from string constant to 'char*' /build/buildd/ball-1.3.2/build/source/STRUCTURE/smartsParserParser.C:3005:35: warning: deprecated conversion from string constant to 'char*' /build/buildd/ball-1.3.2/build/source/STRUCTURE/smilesParserLexer.C:1700:13: warning: 'void yy_fatal_error(const char*)' defined but not used Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserLexer.o Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/directory.o /build/buildd/ball-1.3.2/build/source/STRUCTURE/smartsParserLexer.C:1790:13: warning: 'void yy_fatal_error(const char*)' defined but not used Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/file.o /build/buildd/ball-1.3.2/source/SYSTEM/file.C: In copy constructor 'BALL::File::File(const BALL::File&)': /build/buildd/ball-1.3.2/source/SYSTEM/file.C:225:2: warning: base class 'struct std::basic_ios' should be explicitly initialized in the copy constructor /build/buildd/ball-1.3.2/source/SYSTEM/file.C: In member function 'bool BALL::File::open(const BALL::String&, BALL::File::OpenMode)': /build/buildd/ball-1.3.2/source/SYSTEM/file.C:303:28: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/fileSystem.o Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/mutex.o Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/path.o Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/sysinfo.o Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/systemCalls.o Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/TCPTransfer.o Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/timer.o Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/networking.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/qthread.h:45, from /build/buildd/ball-1.3.2/include/BALL/SYSTEM/networking.h:24, from /build/buildd/ball-1.3.2/source/SYSTEM/networking.C:6: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Linking CXX shared library lib/libBALL.so message after library is built ========================================================================== The BALL library has been built. You should now build BALLView and the unit tests. Then you should test your installation by executing the tests. Make sure to add the BALL and contrib lib/ path to your LD_LIBRARY_PATH environment variable. Otherwise the tests and BALLView will not work. For a full list of targets execute: make targets ========================================================================== make[3]: Leaving directory `/build/buildd/ball-1.3.2/build' Built target BALL make[3]: Entering directory `/build/buildd/ball-1.3.2/build' Generating BALLCoremodule/sipBALLCorepart0.cpp, BALLCoremodule/sipBALLCorepart1.cpp, BALLCoremodule/sipBALLCorepart2.cpp, BALLCoremodule/sipBALLCorepart3.cpp, BALLCoremodule/sipBALLCorepart4.cpp, BALLCoremodule/sipBALLCorepart5.cpp, BALLCoremodule/sipBALLCorepart6.cpp, BALLCoremodule/sipBALLCorepart7.cpp make[3]: Entering directory `/build/buildd/ball-1.3.2/build' Generating source/VIEW/INPUT/moc_inputPlugin.C /build/buildd/ball-1.3.2/include/BALL/VIEW/INPUT/inputPlugin.h:0: Warning: No relevant classes found. No output generated. Generating include/BALL/VIEW/UIC/ui_assignBondOrderConfigurationDialog.h /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget1'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget2'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget3'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget4'. Generating include/BALL/VIEW/UIC/ui_assignBondOrderResultsDialog.h Generating include/BALL/VIEW/UIC/ui_atomOverview.h Generating include/BALL/VIEW/UIC/ui_amberConfigurationDialog.h Generating include/BALL/VIEW/UIC/ui_bondProperties.h Generating include/BALL/VIEW/UIC/ui_charmmConfigurationDialog.h Generating include/BALL/VIEW/UIC/ui_contourSurfaceDialog.h Generating include/BALL/VIEW/UIC/ui_coloringSettingsDialog.h /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/coloringSettingsDialog.ui: Warning: The name 'textLabel1_4_3_4' (QLabel) is already in use, defaulting to 'textLabel1_4_3_41'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/coloringSettingsDialog.ui: Warning: The name 'textLabel1_4_3' (QLabel) is already in use, defaulting to 'textLabel1_4_31'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/coloringSettingsDialog.ui: Warning: The name 'textLabel1_4_3_5' (QLabel) is already in use, defaulting to 'textLabel1_4_3_51'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/coloringSettingsDialog.ui: Warning: The name 'textLabel1_4_3_3' (QLabel) is already in use, defaulting to 'textLabel1_4_3_31'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/coloringSettingsDialog.ui: Warning: The name 'textLabel1_4_3_3' (QLabel) is already in use, defaulting to 'textLabel1_4_3_32'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/coloringSettingsDialog.ui: Warning: The name 'textLabel1_4_3_3' (QLabel) is already in use, defaulting to 'textLabel1_4_3_33'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/coloringSettingsDialog.ui: Warning: The name 'textLabel1_4_3_4_3' (QLabel) is already in use, defaulting to 'textLabel1_4_3_4_31'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/coloringSettingsDialog.ui: Warning: The name 'textLabel1_4_3_5' (QLabel) is already in use, defaulting to 'textLabel1_4_3_52'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/coloringSettingsDialog.ui: Warning: The name 'textLabel1_4_3_5_3' (QLabel) is already in use, defaulting to 'textLabel1_4_3_5_31'. Generating include/BALL/VIEW/UIC/ui_compositeProperties.h Generating include/BALL/VIEW/UIC/ui_clippingDialog.h Generating include/BALL/VIEW/UIC/ui_dockDialog.h Generating include/BALL/VIEW/UIC/ui_dockProgressDialog.h Generating include/BALL/VIEW/UIC/ui_dockResultDialog.h Generating include/BALL/VIEW/UIC/ui_downloadPDBFile.h Generating include/BALL/VIEW/UIC/ui_editSettings.h Generating include/BALL/VIEW/UIC/ui_editSingleShortcut.h Generating include/BALL/VIEW/UIC/ui_displayProperties.h Generating include/BALL/VIEW/UIC/ui_fieldLinesDialog.h /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/fieldLinesDialog.ui: Warning: An invalid icon property 'windowIcon' was encountered. Generating include/BALL/VIEW/UIC/ui_FDPBDialog.h Generating include/BALL/VIEW/UIC/ui_gridVisualizationDialog.h Generating include/BALL/VIEW/UIC/ui_labelDialog.h Generating include/BALL/VIEW/UIC/ui_lightSettings.h /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/lightSettings.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget1'. Generating include/BALL/VIEW/UIC/ui_mainControlPreferences.h Generating include/BALL/VIEW/UIC/ui_materialSettings.h /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/materialSettings.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget1'. Generating include/BALL/VIEW/UIC/ui_minimizationDialog.h Generating include/BALL/VIEW/UIC/ui_modelSettingsDialog.h Generating include/BALL/VIEW/UIC/ui_modifyRepresentationDialog.h Generating include/BALL/VIEW/UIC/ui_molecularDynamicsDialog.h Generating include/BALL/VIEW/UIC/ui_MMFF94ConfigurationDialog.h Generating include/BALL/VIEW/UIC/ui_networkPreferences.h Generating include/BALL/VIEW/UIC/ui_openSavePreferences.h Generating include/BALL/VIEW/UIC/ui_parsedFunctionDialog.h Scanning dependencies of target BALLCoremodule make[3]: Leaving directory `/build/buildd/ball-1.3.2/build' Generating include/BALL/VIEW/UIC/ui_peptideDialog.h Generating include/BALL/VIEW/UIC/ui_pluginDialog.h make[3]: Entering directory `/build/buildd/ball-1.3.2/build' Building CXX object source/PYTHON/EXTENSIONS/CMakeFiles/BALLCoremodule.dir/BALLCoremodule/sipBALLCorepart0.o Generating include/BALL/VIEW/UIC/ui_preferences.h Generating include/BALL/VIEW/UIC/ui_exportGeometryDialog.h Generating include/BALL/VIEW/UIC/ui_PTEDialog.h Generating include/BALL/VIEW/UIC/ui_pubchemDialog.h Generating include/BALL/VIEW/UIC/ui_raytraceableContourSurfaceDialog.h Generating include/BALL/VIEW/UIC/ui_setCamera.h Generating include/BALL/VIEW/UIC/ui_setClippingPlane.h Generating include/BALL/VIEW/UIC/ui_shortcutDialog.h Generating include/BALL/VIEW/UIC/ui_snapShotVisualisation.h Generating include/BALL/VIEW/UIC/ui_stageSettings.h /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/stageSettings.ui: Warning: The name 'min_label' (QLabel) is already in use, defaulting to 'min_label1'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/stageSettings.ui: Warning: The name 'max_label' (QLabel) is already in use, defaulting to 'max_label1'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/stageSettings.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget1'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/stageSettings.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget2'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/stageSettings.ui: Warning: The name 'label' (QLabel) is already in use, defaulting to 'label1'. /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/stageSettings.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget3'. Generating include/BALL/VIEW/UIC/ui_stereoSettingsDialog.h Generating include/BALL/VIEW/UIC/ui_pythonSettings.h Generating include/BALL/VIEW/UIC/ui_geometricFitDialog.h Generating source/VIEW/DIALOGS/moc_assignBondOrderConfigurationDialog.C Generating source/VIEW/DIALOGS/moc_assignBondOrderResultsDialog.C Generating source/VIEW/DIALOGS/moc_atomOverview.C Generating source/VIEW/DIALOGS/moc_amberConfigurationDialog.C Generating source/VIEW/DIALOGS/moc_bondProperties.C Generating source/VIEW/DIALOGS/moc_charmmConfigurationDialog.C Generating source/VIEW/DIALOGS/moc_contourSurfaceDialog.C Generating source/VIEW/DIALOGS/moc_coloringSettingsDialog.C Generating source/VIEW/DIALOGS/moc_compositeProperties.C Generating source/VIEW/DIALOGS/moc_clippingDialog.C Generating source/VIEW/DIALOGS/moc_dockDialog.C Generating source/VIEW/DIALOGS/moc_dockProgressDialog.C Generating source/VIEW/DIALOGS/moc_dockResultDialog.C Generating source/VIEW/DIALOGS/moc_downloadPDBFile.C Generating source/VIEW/DIALOGS/moc_editSettings.C Generating source/VIEW/DIALOGS/moc_editSingleShortcut.C Generating source/VIEW/DIALOGS/moc_displayProperties.C Generating source/VIEW/DIALOGS/moc_fieldLinesDialog.C Generating source/VIEW/DIALOGS/moc_FDPBDialog.C Generating source/VIEW/DIALOGS/moc_gridVisualizationDialog.C Generating source/VIEW/DIALOGS/moc_labelDialog.C Generating source/VIEW/DIALOGS/moc_lightSettings.C Generating source/VIEW/DIALOGS/moc_mainControlPreferences.C Generating source/VIEW/DIALOGS/moc_materialSettings.C Generating source/VIEW/DIALOGS/moc_minimizationDialog.C Generating source/VIEW/DIALOGS/moc_modelSettingsDialog.C Generating source/VIEW/DIALOGS/moc_modifyRepresentationDialog.C Generating source/VIEW/DIALOGS/moc_molecularDynamicsDialog.C Generating source/VIEW/DIALOGS/moc_molecularFileDialog.C /build/buildd/ball-1.3.2/source/PYTHON/EXTENSIONS/BALL/numericalSAS.sip: In function 'PyObject* func_calculateSASPoints(PyObject*, PyObject*)': /build/buildd/ball-1.3.2/source/PYTHON/EXTENSIONS/BALL/numericalSAS.sip:52:3: warning: 'float BALL::calculateSASPoints(const BALL::AtomContainer&, BALL::Surface&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:371) /build/buildd/ball-1.3.2/source/PYTHON/EXTENSIONS/BALL/numericalSAS.sip:52:39: warning: 'float BALL::calculateSASPoints(const BALL::AtomContainer&, BALL::Surface&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:371) /build/buildd/ball-1.3.2/source/PYTHON/EXTENSIONS/BALL/numericalSAS.sip: In function 'PyObject* func_calculateSASAtomAreas(PyObject*, PyObject*)': /build/buildd/ball-1.3.2/source/PYTHON/EXTENSIONS/BALL/numericalSAS.sip:33:3: warning: 'float BALL::calculateSASAtomAreas(const BALL::AtomContainer&, BALL::HashMap&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:349) /build/buildd/ball-1.3.2/source/PYTHON/EXTENSIONS/BALL/numericalSAS.sip:33:42: warning: 'float BALL::calculateSASAtomAreas(const BALL::AtomContainer&, BALL::HashMap&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:349) /build/buildd/ball-1.3.2/build/source/PYTHON/EXTENSIONS/BALLCoremodule/sipBALLCorepart0.cpp: In function 'PyObject* func_calculateSASVolume(PyObject*, PyObject*)': /build/buildd/ball-1.3.2/build/source/PYTHON/EXTENSIONS/BALLCoremodule/sipBALLCorepart0.cpp:3132:22: warning: 'float BALL::calculateSASVolume(const BALL::AtomContainer&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:334) /build/buildd/ball-1.3.2/build/source/PYTHON/EXTENSIONS/BALLCoremodule/sipBALLCorepart0.cpp:3132:50: warning: 'float BALL::calculateSASVolume(const BALL::AtomContainer&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:334) /build/buildd/ball-1.3.2/build/source/PYTHON/EXTENSIONS/BALLCoremodule/sipBALLCorepart0.cpp: In function 'PyObject* func_calculateSASArea(PyObject*, PyObject*)': /build/buildd/ball-1.3.2/build/source/PYTHON/EXTENSIONS/BALLCoremodule/sipBALLCorepart0.cpp:3167:22: warning: 'float BALL::calculateSASArea(const BALL::AtomContainer&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:320) /build/buildd/ball-1.3.2/build/source/PYTHON/EXTENSIONS/BALLCoremodule/sipBALLCorepart0.cpp:3167:48: warning: 'float BALL::calculateSASArea(const BALL::AtomContainer&, float, BALL::Size)' is deprecated (declared at /build/buildd/ball-1.3.2/include/BALL/STRUCTURE/numericalSAS.h:320) Generating source/VIEW/DIALOGS/moc_MMFF94ConfigurationDialog.C Generating source/VIEW/DIALOGS/moc_networkPreferences.C Generating source/VIEW/DIALOGS/moc_openSavePreferences.C Generating source/VIEW/DIALOGS/moc_parsedFunctionDialog.C Generating source/VIEW/DIALOGS/moc_peptideDialog.C Generating source/VIEW/DIALOGS/moc_pluginDialog.C Generating source/VIEW/DIALOGS/moc_preferences.C Generating source/VIEW/DIALOGS/moc_exportGeometryDialog.C Generating source/VIEW/DIALOGS/moc_PTEDialog.C Generating source/VIEW/DIALOGS/moc_pubchemDialog.C Generating source/VIEW/DIALOGS/moc_raytraceableContourSurfaceDialog.C Generating source/VIEW/DIALOGS/moc_setCamera.C Generating source/VIEW/DIALOGS/moc_setClippingPlane.C Generating source/VIEW/DIALOGS/moc_serverPreferences.C Generating source/VIEW/DIALOGS/moc_shortcutDialog.C Generating source/VIEW/DIALOGS/moc_snapShotVisualisation.C Generating source/VIEW/DIALOGS/moc_stageSettings.C Generating source/VIEW/DIALOGS/moc_stereoSettingsDialog.C Generating source/VIEW/DIALOGS/moc_pythonSettings.C Generating source/VIEW/DIALOGS/moc_geometricFitDialog.C Generating source/VIEW/DATATYPE/moc_dataset.C Generating source/VIEW/DATATYPE/moc_standardDatasets.C Generating source/VIEW/KERNEL/moc_mainControl.C Generating source/VIEW/KERNEL/moc_shortcutRegistry.C Generating source/VIEW/KERNEL/moc_serverWidget.C Generating source/VIEW/WIDGETS/moc_datasetControl.C Generating source/VIEW/WIDGETS/moc_dockingController.C Generating source/VIEW/WIDGETS/moc_dockWidget.C Generating source/VIEW/WIDGETS/moc_editableScene.C Generating source/VIEW/WIDGETS/moc_fileObserver.C Generating source/VIEW/WIDGETS/moc_genericControl.C Generating source/VIEW/WIDGETS/moc_geometricControl.C Generating source/VIEW/WIDGETS/moc_helpViewer.C Generating source/VIEW/WIDGETS/moc_logView.C Generating source/VIEW/WIDGETS/moc_molecularControl.C Generating source/VIEW/WIDGETS/moc_molecularStructure.C Generating source/VIEW/WIDGETS/moc_scene.C Generating source/VIEW/WIDGETS/moc_shortcutTableView.C Generating source/VIEW/WIDGETS/moc_SDWidget.C Generating source/VIEW/WIDGETS/moc_testFramework.C Generating source/VIEW/WIDGETS/moc_pyWidget.C Scanning dependencies of target VIEW make[3]: Leaving directory `/build/buildd/ball-1.3.2/build' make[3]: Entering directory `/build/buildd/ball-1.3.2/build' Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.o Building CXX object source/PYTHON/EXTENSIONS/CMakeFiles/BALLCoremodule.dir/BALLCoremodule/sipBALLCorepart1.o In file included from /usr/include/qt4/QtGui/qkeysequence.h:46:0, from /usr/include/qt4/QtGui/QKeySequence:1, from /build/buildd/ball-1.3.2/include/BALL/VIEW/KERNEL/modularWidget.h:18, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:18, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C:5: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/assignBondOrderResultsDialog.o In file included from /usr/include/qt4/QtGui/qkeysequence.h:46:0, from /usr/include/qt4/QtGui/QKeySequence:1, from /build/buildd/ball-1.3.2/include/BALL/VIEW/KERNEL/modularWidget.h:18, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h:9, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:6: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/atomOverview.o Building CXX object source/PYTHON/EXTENSIONS/CMakeFiles/BALLCoremodule.dir/BALLCoremodule/sipBALLCorepart2.o /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/atomOverview.C: In member function 'void BALL::VIEW::AtomOverview::itemChanged(QTableWidgetItem*)': /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/atomOverview.C:177:24: warning: suggest parentheses around comparison in operand of '|' In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/qdatastream.h:46, from /usr/include/qt4/QtCore/qmetatype.h:49, from /usr/include/qt4/QtCore/qvariant.h:48, from /usr/include/qt4/QtCore/QVariant:1, from /build/buildd/ball-1.3.2/build/include/BALL/VIEW/UIC/ui_atomOverview.h:13, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/atomOverview.h:16, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/atomOverview.C:6: /usr/include/qt4/QtCore/qstring.h: At global scope: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/amberConfigurationDialog.o Building CXX object source/PYTHON/EXTENSIONS/CMakeFiles/BALLCoremodule.dir/BALLCoremodule/sipBALLCorepart3.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/qdatastream.h:46, from /usr/include/qt4/QtCore/qmetatype.h:49, from /usr/include/qt4/QtCore/qvariant.h:48, from /usr/include/qt4/QtCore/QVariant:1, from /build/buildd/ball-1.3.2/build/include/BALL/VIEW/UIC/ui_amberConfigurationDialog.h:14, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/amberConfigurationDialog.h:16, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/amberConfigurationDialog.C:7: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/bondProperties.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/qdatastream.h:46, from /usr/include/qt4/QtCore/qmetatype.h:49, from /usr/include/qt4/QtCore/qvariant.h:48, from /usr/include/qt4/QtCore/QVariant:1, from /build/buildd/ball-1.3.2/build/include/BALL/VIEW/UIC/ui_bondProperties.h:14, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/bondProperties.h:15, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/bondProperties.C:4: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/charmmConfigurationDialog.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/qdatastream.h:46, from /usr/include/qt4/QtCore/qmetatype.h:49, from /usr/include/qt4/QtCore/qvariant.h:48, from /usr/include/qt4/QtCore/QVariant:1, from /build/buildd/ball-1.3.2/build/include/BALL/VIEW/UIC/ui_charmmConfigurationDialog.h:14, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/charmmConfigurationDialog.h:16, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/charmmConfigurationDialog.C:7: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/contourSurfaceDialog.o Building CXX object source/PYTHON/EXTENSIONS/CMakeFiles/BALLCoremodule.dir/BALLCoremodule/sipBALLCorepart4.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/qdatastream.h:46, from /usr/include/qt4/QtCore/qmetatype.h:49, from /usr/include/qt4/QtCore/qvariant.h:48, from /usr/include/qt4/QtCore/QVariant:1, from /build/buildd/ball-1.3.2/build/include/BALL/VIEW/UIC/ui_contourSurfaceDialog.h:14, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/contourSurfaceDialog.h:15, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/contourSurfaceDialog.C:4: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/coloringSettingsDialog.o Building CXX object source/PYTHON/EXTENSIONS/CMakeFiles/BALLCoremodule.dir/BALLCoremodule/sipBALLCorepart5.o Building CXX object source/PYTHON/EXTENSIONS/CMakeFiles/BALLCoremodule.dir/BALLCoremodule/sipBALLCorepart6.o In file included from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/coloringSettingsDialog.h:26:0, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/coloringSettingsDialog.C:7: /build/buildd/ball-1.3.2/build/include/BALL/VIEW/UIC/ui_coloringSettingsDialog.h: In member function 'void Ui_ColoringSettingsDialogData::setupUi(QWidget*)': /build/buildd/ball-1.3.2/build/include/BALL/VIEW/UIC/ui_coloringSettingsDialog.h:153:10: note: variable tracking size limit exceeded with -fvar-tracking-assignments, retrying without In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/qcolordialog.h:45, from /usr/include/qt4/QtGui/QColorDialog:1, from /build/buildd/ball-1.3.2/include/BALL/VIEW/KERNEL/common.h:31, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/coloringSettingsDialog.h:19, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/coloringSettingsDialog.C:7: /usr/include/qt4/QtCore/qstring.h: At global scope: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/compositeProperties.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/qdatastream.h:46, from /usr/include/qt4/QtCore/qmetatype.h:49, from /usr/include/qt4/QtCore/qvariant.h:48, from /usr/include/qt4/QtCore/QVariant:1, from /build/buildd/ball-1.3.2/build/include/BALL/VIEW/UIC/ui_compositeProperties.h:14, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/compositeProperties.h:18, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/compositeProperties.C:4: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/clippingDialog.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/qcolordialog.h:45, from /usr/include/qt4/QtGui/QColorDialog:1, from /build/buildd/ball-1.3.2/include/BALL/VIEW/KERNEL/common.h:31, from /build/buildd/ball-1.3.2/include/BALL/VIEW/KERNEL/representation.h:23, from /build/buildd/ball-1.3.2/include/BALL/VIEW/KERNEL/clippingPlane.h:15, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/clippingDialog.h:13, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/clippingDialog.C:6: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockDialog.o Building CXX object source/PYTHON/EXTENSIONS/CMakeFiles/BALLCoremodule.dir/BALLCoremodule/sipBALLCorepart7.o Building CXX object source/PYTHON/EXTENSIONS/CMakeFiles/BALLCoremodule.dir/BALL/pyBALLSipHelper.o In file included from /usr/include/python2.7/Python.h:8:0, from /usr/include/python2.7/sip.h:32, from /build/buildd/ball-1.3.2/build/source/PYTHON/EXTENSIONS/BALLCoremodule/sipAPIBALLCore.h:14, from /build/buildd/ball-1.3.2/source/PYTHON/EXTENSIONS/BALL/pyBALLSipHelper.C:7: /usr/include/python2.7/pyconfig.h:1155:0: warning: "_POSIX_C_SOURCE" redefined /usr/include/features.h:163:0: note: this is the location of the previous definition /usr/include/python2.7/pyconfig.h:1177:0: warning: "_XOPEN_SOURCE" redefined /usr/include/features.h:165:0: note: this is the location of the previous definition Building CXX object source/PYTHON/EXTENSIONS/CMakeFiles/BALLCoremodule.dir/BALL/pyIndexList.o Building CXX object source/PYTHON/EXTENSIONS/CMakeFiles/BALLCoremodule.dir/BALL/pyConstant.o Linking CXX shared library ../../../lib/BALLCore.so make[3]: Leaving directory `/build/buildd/ball-1.3.2/build' Built target BALLCoremodule Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockProgressDialog.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/qtimer.h:48, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/dockProgressDialog.h:21, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/dockProgressDialog.C:4: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockResultDialog.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/qdatastream.h:46, from /usr/include/qt4/QtCore/qstringlist.h:46, from /usr/include/qt4/QtGui/qcolor.h:47, from /usr/include/qt4/QtGui/qpixmap.h:46, from /usr/include/qt4/QtGui/qicon.h:48, from /usr/include/qt4/QtGui/qabstractbutton.h:45, from /usr/include/qt4/QtGui/qpushbutton.h:45, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/dockDialog.C:7: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/downloadPDBFile.o In file included from /usr/include/qt4/QtGui/qkeysequence.h:46:0, from /usr/include/qt4/QtGui/QKeySequence:1, from /build/buildd/ball-1.3.2/include/BALL/VIEW/KERNEL/modularWidget.h:18, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/downloadPDBFile.h:13, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/downloadPDBFile.C:7: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/editSettings.o In file included from /usr/include/qt4/QtGui/qkeysequence.h:46:0, from /usr/include/qt4/QtGui/QKeySequence:1, from /build/buildd/ball-1.3.2/include/BALL/VIEW/KERNEL/modularWidget.h:18, from /build/buildd/ball-1.3.2/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/dockResultDialog.C:4: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/editSingleShortcut.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/qdatastream.h:46, from /usr/include/qt4/QtCore/qmetatype.h:49, from /usr/include/qt4/QtCore/qvariant.h:48, from /usr/include/qt4/QtCore/QVariant:1, from /build/buildd/ball-1.3.2/build/include/BALL/VIEW/UIC/ui_editSettings.h:14, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/editSettings.h:16, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/editSettings.C:7: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/displayProperties.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/QObject:1, from /build/buildd/ball-1.3.2/include/BALL/VIEW/KERNEL/shortcutRegistry.h:22, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/editSingleShortcut.h:14, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/editSingleShortcut.C:5: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/fieldLinesDialog.o In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/qcolordialog.h:45, from /usr/include/qt4/QtGui/QColorDialog:1, from /build/buildd/ball-1.3.2/include/BALL/VIEW/KERNEL/common.h:31, from /build/buildd/ball-1.3.2/include/BALL/VIEW/KERNEL/representation.h:23, from /build/buildd/ball-1.3.2/include/BALL/VIEW/MODELS/fieldLineCreator.h:15, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/fieldLinesDialog.h:13, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/fieldLinesDialog.C:6: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/FDPBDialog.o In file included from /usr/include/qt4/QtGui/qkeysequence.h:46:0, from /usr/include/qt4/QtGui/QKeySequence:1, from /build/buildd/ball-1.3.2/include/BALL/VIEW/KERNEL/modularWidget.h:18, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/displayProperties.h:15, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/displayProperties.C:7: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/gridVisualizationDialog.o In file included from /usr/include/qt4/QtOpenGL/qgl.h:69:0, from /build/buildd/ball-1.3.2/include/BALL/VIEW/RENDERING/glDisplayList.h:13, from /build/buildd/ball-1.3.2/include/BALL/VIEW/RENDERING/glRenderer.h:35, from /build/buildd/ball-1.3.2/include/BALL/VIEW/WIDGETS/scene.h:13, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/gridVisualizationDialog.C:14: /usr/include/GLES2/gl2.h:38:26: error: conflicting declaration 'typedef khronos_intptr_t GLintptr' /usr/include/GL/glew.h:1608:19: error: 'GLintptr' has a previous declaration as 'typedef ptrdiff_t GLintptr' /usr/include/GLES2/gl2.h:39:26: error: conflicting declaration 'typedef khronos_ssize_t GLsizeiptr' /usr/include/GL/glew.h:1607:19: error: 'GLsizeiptr' has a previous declaration as 'typedef ptrdiff_t GLsizeiptr' /usr/include/GLES2/gl2.h:474:68: error: 'void __glewActiveTexture(GLenum)' redeclared as different kind of symbol /usr/include/GL/glew.h:11163:40: error: previous declaration of 'void (* __glewActiveTexture)(GLenum)' /usr/include/GLES2/gl2.h:475:82: error: 'void __glewAttachShader(GLuint, GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11278:39: error: previous declaration of 'void (* __glewAttachShader)(GLuint, GLuint)' /usr/include/GLES2/gl2.h:476:107: error: 'void __glewBindAttribLocation(GLuint, GLuint, const GLchar*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11279:45: error: previous declaration of 'void (* __glewBindAttribLocation)(GLuint, GLuint, const GLchar*)' /usr/include/GLES2/gl2.h:477:79: error: 'void __glewBindBuffer(GLenum, GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11259:37: error: previous declaration of 'void (* __glewBindBuffer)(GLenum, GLuint)' /usr/include/GLES2/gl2.h:478:89: error: 'void __glewBindFramebuffer(GLenum, GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11527:42: error: previous declaration of 'void (* __glewBindFramebuffer)(GLenum, GLuint)' /usr/include/GLES2/gl2.h:479:91: error: 'void __glewBindRenderbuffer(GLenum, GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11528:43: error: previous declaration of 'void (* __glewBindRenderbuffer)(GLenum, GLuint)' /usr/include/GLES2/gl2.h:481:110: error: 'void __glewBlendColor(khronos_float_t, khronos_float_t, khronos_float_t, khronos_float_t)' redeclared as different kind of symbol /usr/include/GL/glew.h:11210:37: error: previous declaration of 'void (* __glewBlendColor)(GLclampf, GLclampf, GLclampf, GLclampf)' /usr/include/GLES2/gl2.h:482:67: error: 'void __glewBlendEquation(GLenum)' redeclared as different kind of symbol /usr/include/GL/glew.h:11211:40: error: previous declaration of 'void (* __glewBlendEquation)(GLenum)' /usr/include/GLES2/gl2.h:483:94: error: 'void __glewBlendEquationSeparate(GLenum, GLenum)' redeclared as different kind of symbol /usr/include/GL/glew.h:11280:48: error: previous declaration of 'void (* __glewBlendEquationSeparate)(GLenum, GLenum)' /usr/include/GLES2/gl2.h:485:120: error: 'void __glewBlendFuncSeparate(GLenum, GLenum, GLenum, GLenum)' redeclared as different kind of symbol /usr/include/GL/glew.h:11212:44: error: previous declaration of 'void (* __glewBlendFuncSeparate)(GLenum, GLenum, GLenum, GLenum)' /usr/include/GLES2/gl2.h:486:115: error: 'void __glewBufferData(GLenum, GLsizeiptr, const GLvoid*, GLenum)' redeclared as different kind of symbol /usr/include/GL/glew.h:11260:37: error: previous declaration of 'void (* __glewBufferData)(GLenum, GLsizeiptr, const GLvoid*, GLenum)' /usr/include/GLES2/gl2.h:487:121: error: 'void __glewBufferSubData(GLenum, GLintptr, GLsizeiptr, const GLvoid*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11261:40: error: previous declaration of 'void (* __glewBufferSubData)(GLenum, GLintptr, GLsizeiptr, const GLvoid*)' /usr/include/GLES2/gl2.h:488:76: error: 'GLenum __glewCheckFramebufferStatus(GLenum)' redeclared as different kind of symbol /usr/include/GL/glew.h:11530:49: error: previous declaration of 'GLenum (* __glewCheckFramebufferStatus)(GLenum)' /usr/include/GLES2/gl2.h:494:67: error: 'void __glewCompileShader(GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11281:40: error: previous declaration of 'void (* __glewCompileShader)(GLuint)' In file included from /usr/include/qt4/QtOpenGL/qgl.h:69:0, from /build/buildd/ball-1.3.2/include/BALL/VIEW/RENDERING/glDisplayList.h:13, from /build/buildd/ball-1.3.2/include/BALL/VIEW/RENDERING/glRenderer.h:35, from /build/buildd/ball-1.3.2/include/BALL/VIEW/WIDGETS/scene.h:13, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/gridVisualizationDialog.C:14: /usr/include/GLES2/gl2.h:495:194: error: 'void __glewCompressedTexImage2D(GLenum, GLint, GLenum, GLsizei, GLsizei, GLint, GLsizei, const GLvoid*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11166:47: error: previous declaration of 'void (* __glewCompressedTexImage2D)(GLenum, GLint, GLenum, GLsizei, GLsizei, GLint, GLsizei, const GLvoid*)' /usr/include/GLES2/gl2.h:496:205: error: 'void __glewCompressedTexSubImage2D(GLenum, GLint, GLint, GLint, GLsizei, GLsizei, GLenum, GLsizei, const GLvoid*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11169:50: error: previous declaration of 'void (* __glewCompressedTexSubImage2D)(GLenum, GLint, GLint, GLint, GLsizei, GLsizei, GLenum, GLsizei, const GLvoid*)' /usr/include/GLES2/gl2.h:499:58: error: 'GLuint __glewCreateProgram()' redeclared as different kind of symbol /usr/include/GL/glew.h:11282:40: error: previous declaration of 'GLuint (* __glewCreateProgram)()' /usr/include/GLES2/gl2.h:500:64: error: 'GLuint __glewCreateShader(GLenum)' redeclared as different kind of symbol /usr/include/GL/glew.h:11283:39: error: previous declaration of 'GLuint (* __glewCreateShader)(GLenum)' /usr/include/GLES2/gl2.h:502:86: error: 'void __glewDeleteBuffers(GLsizei, const GLuint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11262:40: error: previous declaration of 'void (* __glewDeleteBuffers)(GLsizei, const GLuint*)' /usr/include/GLES2/gl2.h:503:96: error: 'void __glewDeleteFramebuffers(GLsizei, const GLuint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11531:45: error: previous declaration of 'void (* __glewDeleteFramebuffers)(GLsizei, const GLuint*)' /usr/include/GLES2/gl2.h:504:68: error: 'void __glewDeleteProgram(GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11284:40: error: previous declaration of 'void (* __glewDeleteProgram)(GLuint)' /usr/include/GLES2/gl2.h:505:98: error: 'void __glewDeleteRenderbuffers(GLsizei, const GLuint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11532:46: error: previous declaration of 'void (* __glewDeleteRenderbuffers)(GLsizei, const GLuint*)' /usr/include/GLES2/gl2.h:506:66: error: 'void __glewDeleteShader(GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11285:39: error: previous declaration of 'void (* __glewDeleteShader)(GLuint)' /usr/include/GLES2/gl2.h:511:82: error: 'void __glewDetachShader(GLuint, GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11286:39: error: previous declaration of 'void (* __glewDetachShader)(GLuint, GLuint)' /usr/include/GLES2/gl2.h:513:77: error: 'void __glewDisableVertexAttribArray(GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11287:51: error: previous declaration of 'void (* __glewDisableVertexAttribArray)(GLuint)' /usr/include/GLES2/gl2.h:517:76: error: 'void __glewEnableVertexAttribArray(GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11289:50: error: previous declaration of 'void (* __glewEnableVertexAttribArray)(GLuint)' /usr/include/GLES2/gl2.h:520:144: error: 'void __glewFramebufferRenderbuffer(GLenum, GLenum, GLenum, GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11533:50: error: previous declaration of 'void (* __glewFramebufferRenderbuffer)(GLenum, GLenum, GLenum, GLuint)' /usr/include/GLES2/gl2.h:521:140: error: 'void __glewFramebufferTexture2D(GLenum, GLenum, GLenum, GLuint, GLint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11535:47: error: previous declaration of 'void (* __glewFramebufferTexture2D)(GLenum, GLenum, GLenum, GLuint, GLint)' /usr/include/GLES2/gl2.h:523:77: error: 'void __glewGenBuffers(GLsizei, GLuint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11265:37: error: previous declaration of 'void (* __glewGenBuffers)(GLsizei, GLuint*)' /usr/include/GLES2/gl2.h:524:68: error: 'void __glewGenerateMipmap(GLenum)' redeclared as different kind of symbol /usr/include/GL/glew.h:11540:41: error: previous declaration of 'void (* __glewGenerateMipmap)(GLenum)' /usr/include/GLES2/gl2.h:525:87: error: 'void __glewGenFramebuffers(GLsizei, GLuint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11538:42: error: previous declaration of 'void (* __glewGenFramebuffers)(GLsizei, GLuint*)' /usr/include/GLES2/gl2.h:526:89: error: 'void __glewGenRenderbuffers(GLsizei, GLuint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11539:43: error: previous declaration of 'void (* __glewGenRenderbuffers)(GLsizei, GLuint*)' /usr/include/GLES2/gl2.h:528:159: error: 'void __glewGetActiveAttrib(GLuint, GLuint, GLsizei, GLsizei*, GLint*, GLenum*, GLchar*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11290:42: error: previous declaration of 'void (* __glewGetActiveAttrib)(GLuint, GLuint, GLsizei, GLsizei*, GLint*, GLenum*, GLchar*)' /usr/include/GLES2/gl2.h:529:160: error: 'void __glewGetActiveUniform(GLuint, GLuint, GLsizei, GLsizei*, GLint*, GLenum*, GLchar*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11291:43: error: previous declaration of 'void (* __glewGetActiveUniform)(GLuint, GLuint, GLsizei, GLsizei*, GLint*, GLenum*, GLchar*)' /usr/include/GLES2/gl2.h:530:124: error: 'void __glewGetAttachedShaders(GLuint, GLsizei, GLsizei*, GLuint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11292:45: error: previous declaration of 'void (* __glewGetAttachedShaders)(GLuint, GLsizei, GLsizei*, GLuint*)' /usr/include/GLES2/gl2.h:531:92: error: 'int __glewGetAttribLocation(GLuint, const GLchar*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11293:44: error: previous declaration of 'GLint (* __glewGetAttribLocation)(GLuint, const GLchar*)' /usr/include/GLES2/gl2.h:533:103: error: 'void __glewGetBufferParameteriv(GLenum, GLenum, GLint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11267:47: error: previous declaration of 'void (* __glewGetBufferParameteriv)(GLenum, GLenum, GLint*)' /usr/include/GLES2/gl2.h:536:137: error: 'void __glewGetFramebufferAttachmentParameteriv(GLenum, GLenum, GLenum, GLint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11541:62: error: previous declaration of 'void (* __glewGetFramebufferAttachmentParameteriv)(GLenum, GLenum, GLenum, GLint*)' /usr/include/GLES2/gl2.h:538:96: error: 'void __glewGetProgramiv(GLuint, GLenum, GLint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11295:39: error: previous declaration of 'void (* __glewGetProgramiv)(GLuint, GLenum, GLint*)' /usr/include/GLES2/gl2.h:539:123: error: 'void __glewGetProgramInfoLog(GLuint, GLsizei, GLsizei*, GLchar*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11294:44: error: previous declaration of 'void (* __glewGetProgramInfoLog)(GLuint, GLsizei, GLsizei*, GLchar*)' /usr/include/GLES2/gl2.h:540:109: error: 'void __glewGetRenderbufferParameteriv(GLenum, GLenum, GLint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11542:53: error: previous declaration of 'void (* __glewGetRenderbufferParameteriv)(GLenum, GLenum, GLint*)' /usr/include/GLES2/gl2.h:541:94: error: 'void __glewGetShaderiv(GLuint, GLenum, GLint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11298:38: error: previous declaration of 'void (* __glewGetShaderiv)(GLuint, GLenum, GLint*)' /usr/include/GLES2/gl2.h:542:121: error: 'void __glewGetShaderInfoLog(GLuint, GLsizei, GLsizei*, GLchar*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11296:43: error: previous declaration of 'void (* __glewGetShaderInfoLog)(GLuint, GLsizei, GLsizei*, GLchar*)' /usr/include/GLES2/gl2.h:544:119: error: 'void __glewGetShaderSource(GLuint, GLsizei, GLsizei*, GLchar*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11297:42: error: previous declaration of 'void (* __glewGetShaderSource)(GLint, GLsizei, GLsizei*, GLchar*)' /usr/include/GLES2/gl2.h:548:100: error: 'void __glewGetUniformfv(GLuint, GLint, khronos_float_t*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11300:39: error: previous declaration of 'void (* __glewGetUniformfv)(GLuint, GLint, GLfloat*)' /usr/include/GLES2/gl2.h:549:98: error: 'void __glewGetUniformiv(GLuint, GLint, GLint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11301:39: error: previous declaration of 'void (* __glewGetUniformiv)(GLuint, GLint, GLint*)' /usr/include/GLES2/gl2.h:550:93: error: 'int __glewGetUniformLocation(GLuint, const GLchar*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11299:45: error: previous declaration of 'GLint (* __glewGetUniformLocation)(GLuint, const GLchar*)' /usr/include/GLES2/gl2.h:551:101: error: 'void __glewGetVertexAttribfv(GLuint, GLenum, khronos_float_t*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11304:44: error: previous declaration of 'void (* __glewGetVertexAttribfv)(GLuint, GLenum, GLfloat*)' /usr/include/GLES2/gl2.h:552:99: error: 'void __glewGetVertexAttribiv(GLuint, GLenum, GLint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11305:44: error: previous declaration of 'void (* __glewGetVertexAttribiv)(GLuint, GLenum, GLint*)' /usr/include/GLES2/gl2.h:553:108: error: 'void __glewGetVertexAttribPointerv(GLuint, GLenum, GLvoid**)' redeclared as different kind of symbol /usr/include/GL/glew.h:11302:50: error: previous declaration of 'void (* __glewGetVertexAttribPointerv)(GLuint, GLenum, GLvoid*)' /usr/include/GLES2/gl2.h:555:62: error: 'GLboolean __glewIsBuffer(GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11273:35: error: previous declaration of 'GLboolean (* __glewIsBuffer)(GLuint)' /usr/include/GLES2/gl2.h:557:72: error: 'GLboolean __glewIsFramebuffer(GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11543:40: error: previous declaration of 'GLboolean (* __glewIsFramebuffer)(GLuint)' /usr/include/GLES2/gl2.h:558:64: error: 'GLboolean __glewIsProgram(GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11306:36: error: previous declaration of 'GLboolean (* __glewIsProgram)(GLuint)' /usr/include/GLES2/gl2.h:559:74: error: 'GLboolean __glewIsRenderbuffer(GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11544:41: error: previous declaration of 'GLboolean (* __glewIsRenderbuffer)(GLuint)' /usr/include/GLES2/gl2.h:560:62: error: 'GLboolean __glewIsShader(GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11307:35: error: previous declaration of 'GLboolean (* __glewIsShader)(GLuint)' /usr/include/GLES2/gl2.h:563:66: error: 'void __glewLinkProgram(GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11308:38: error: previous declaration of 'void (* __glewLinkProgram)(GLuint)' /usr/include/GLES2/gl2.h:568:127: error: 'void __glewRenderbufferStorage(GLenum, GLenum, GLsizei, GLsizei)' redeclared as different kind of symbol /usr/include/GL/glew.h:11545:46: error: previous declaration of 'void (* __glewRenderbufferStorage)(GLenum, GLenum, GLsizei, GLsizei)' /usr/include/GLES2/gl2.h:569:87: error: 'void __glewSampleCoverage(khronos_float_t, GLboolean)' redeclared as different kind of symbol /usr/include/GL/glew.h:11208:41: error: previous declaration of 'void (* __glewSampleCoverage)(GLclampf, GLboolean)' /usr/include/GLES2/gl2.h:572:125: error: 'void __glewShaderSource(GLuint, GLsizei, const GLchar**, const GLint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11309:39: error: previous declaration of 'void (* __glewShaderSource)(GLuint, GLsizei, const GLchar**, const GLint*)' /usr/include/GLES2/gl2.h:574:108: error: 'void __glewStencilFuncSeparate(GLenum, GLenum, GLint, GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11310:46: error: previous declaration of 'void (* __glewStencilFuncSeparate)(GLenum, GLenum, GLint, GLuint)' /usr/include/GLES2/gl2.h:576:84: error: 'void __glewStencilMaskSeparate(GLenum, GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11311:46: error: previous declaration of 'void (* __glewStencilMaskSeparate)(GLenum, GLuint)' /usr/include/GLES2/gl2.h:578:110: error: 'void __glewStencilOpSeparate(GLenum, GLenum, GLenum, GLenum)' redeclared as different kind of symbol /usr/include/GL/glew.h:11312:44: error: previous declaration of 'void (* __glewStencilOpSeparate)(GLenum, GLenum, GLenum, GLenum)' /usr/include/GLES2/gl2.h:585:75: error: 'void __glewUniform1f(GLint, khronos_float_t)' redeclared as different kind of symbol /usr/include/GL/glew.h:11313:36: error: previous declaration of 'void (* __glewUniform1f)(GLint, GLfloat)' /usr/include/GLES2/gl2.h:586:98: error: 'void __glewUniform1fv(GLint, GLsizei, const khronos_float_t*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11314:37: error: previous declaration of 'void (* __glewUniform1fv)(GLint, GLsizei, const GLfloat*)' /usr/include/GLES2/gl2.h:587:73: error: 'void __glewUniform1i(GLint, GLint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11315:36: error: previous declaration of 'void (* __glewUniform1i)(GLint, GLint)' /usr/include/GLES2/gl2.h:588:96: error: 'void __glewUniform1iv(GLint, GLsizei, const GLint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11316:37: error: previous declaration of 'void (* __glewUniform1iv)(GLint, GLsizei, const GLint*)' /usr/include/GLES2/gl2.h:589:86: error: 'void __glewUniform2f(GLint, khronos_float_t, khronos_float_t)' redeclared as different kind of symbol /usr/include/GL/glew.h:11317:36: error: previous declaration of 'void (* __glewUniform2f)(GLint, GLfloat, GLfloat)' /usr/include/GLES2/gl2.h:590:98: error: 'void __glewUniform2fv(GLint, GLsizei, const khronos_float_t*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11318:37: error: previous declaration of 'void (* __glewUniform2fv)(GLint, GLsizei, const GLfloat*)' /usr/include/GLES2/gl2.h:591:82: error: 'void __glewUniform2i(GLint, GLint, GLint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11319:36: error: previous declaration of 'void (* __glewUniform2i)(GLint, GLint, GLint)' /usr/include/GLES2/gl2.h:592:96: error: 'void __glewUniform2iv(GLint, GLsizei, const GLint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11320:37: error: previous declaration of 'void (* __glewUniform2iv)(GLint, GLsizei, const GLint*)' /usr/include/GLES2/gl2.h:593:97: error: 'void __glewUniform3f(GLint, khronos_float_t, khronos_float_t, khronos_float_t)' redeclared as different kind of symbol /usr/include/GL/glew.h:11321:36: error: previous declaration of 'void (* __glewUniform3f)(GLint, GLfloat, GLfloat, GLfloat)' /usr/include/GLES2/gl2.h:594:98: error: 'void __glewUniform3fv(GLint, GLsizei, const khronos_float_t*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11322:37: error: previous declaration of 'void (* __glewUniform3fv)(GLint, GLsizei, const GLfloat*)' /usr/include/GLES2/gl2.h:595:91: error: 'void __glewUniform3i(GLint, GLint, GLint, GLint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11323:36: error: previous declaration of 'void (* __glewUniform3i)(GLint, GLint, GLint, GLint)' /usr/include/GLES2/gl2.h:596:96: error: 'void __glewUniform3iv(GLint, GLsizei, const GLint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11324:37: error: previous declaration of 'void (* __glewUniform3iv)(GLint, GLsizei, const GLint*)' /usr/include/GLES2/gl2.h:597:108: error: 'void __glewUniform4f(GLint, khronos_float_t, khronos_float_t, khronos_float_t, khronos_float_t)' redeclared as different kind of symbol /usr/include/GL/glew.h:11325:36: error: previous declaration of 'void (* __glewUniform4f)(GLint, GLfloat, GLfloat, GLfloat, GLfloat)' /usr/include/GLES2/gl2.h:598:98: error: 'void __glewUniform4fv(GLint, GLsizei, const khronos_float_t*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11326:37: error: previous declaration of 'void (* __glewUniform4fv)(GLint, GLsizei, const GLfloat*)' /usr/include/GLES2/gl2.h:599:100: error: 'void __glewUniform4i(GLint, GLint, GLint, GLint, GLint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11327:36: error: previous declaration of 'void (* __glewUniform4i)(GLint, GLint, GLint, GLint, GLint)' /usr/include/GLES2/gl2.h:600:96: error: 'void __glewUniform4iv(GLint, GLsizei, const GLint*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11328:37: error: previous declaration of 'void (* __glewUniform4iv)(GLint, GLsizei, const GLint*)' /usr/include/GLES2/gl2.h:601:129: error: 'void __glewUniformMatrix2fv(GLint, GLsizei, GLboolean, const khronos_float_t*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11329:43: error: previous declaration of 'void (* __glewUniformMatrix2fv)(GLint, GLsizei, GLboolean, const GLfloat*)' /usr/include/GLES2/gl2.h:602:129: error: 'void __glewUniformMatrix3fv(GLint, GLsizei, GLboolean, const khronos_float_t*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11330:43: error: previous declaration of 'void (* __glewUniformMatrix3fv)(GLint, GLsizei, GLboolean, const GLfloat*)' /usr/include/GLES2/gl2.h:603:129: error: 'void __glewUniformMatrix4fv(GLint, GLsizei, GLboolean, const khronos_float_t*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11331:43: error: previous declaration of 'void (* __glewUniformMatrix4fv)(GLint, GLsizei, GLboolean, const GLfloat*)' /usr/include/GLES2/gl2.h:604:65: error: 'void __glewUseProgram(GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11332:37: error: previous declaration of 'void (* __glewUseProgram)(GLuint)' /usr/include/GLES2/gl2.h:605:70: error: 'void __glewValidateProgram(GLuint)' redeclared as different kind of symbol /usr/include/GL/glew.h:11333:42: error: previous declaration of 'void (* __glewValidateProgram)(GLuint)' /usr/include/GLES2/gl2.h:606:77: error: 'void __glewVertexAttrib1f(GLuint, khronos_float_t)' redeclared as different kind of symbol /usr/include/GL/glew.h:11336:41: error: previous declaration of 'void (* __glewVertexAttrib1f)(GLuint, GLfloat)' /usr/include/GLES2/gl2.h:607:90: error: 'void __glewVertexAttrib1fv(GLuint, const khronos_float_t*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11337:42: error: previous declaration of 'void (* __glewVertexAttrib1fv)(GLuint, const GLfloat*)' /usr/include/GLES2/gl2.h:608:88: error: 'void __glewVertexAttrib2f(GLuint, khronos_float_t, khronos_float_t)' redeclared as different kind of symbol /usr/include/GL/glew.h:11342:41: error: previous declaration of 'void (* __glewVertexAttrib2f)(GLuint, GLfloat, GLfloat)' /usr/include/GLES2/gl2.h:609:90: error: 'void __glewVertexAttrib2fv(GLuint, const khronos_float_t*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11343:42: error: previous declaration of 'void (* __glewVertexAttrib2fv)(GLuint, const GLfloat*)' /usr/include/GLES2/gl2.h:610:99: error: 'void __glewVertexAttrib3f(GLuint, khronos_float_t, khronos_float_t, khronos_float_t)' redeclared as different kind of symbol /usr/include/GL/glew.h:11348:41: error: previous declaration of 'void (* __glewVertexAttrib3f)(GLuint, GLfloat, GLfloat, GLfloat)' /usr/include/GLES2/gl2.h:611:90: error: 'void __glewVertexAttrib3fv(GLuint, const khronos_float_t*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11349:42: error: previous declaration of 'void (* __glewVertexAttrib3fv)(GLuint, const GLfloat*)' /usr/include/GLES2/gl2.h:612:110: error: 'void __glewVertexAttrib4f(GLuint, khronos_float_t, khronos_float_t, khronos_float_t, khronos_float_t)' redeclared as different kind of symbol /usr/include/GL/glew.h:11362:41: error: previous declaration of 'void (* __glewVertexAttrib4f)(GLuint, GLfloat, GLfloat, GLfloat, GLfloat)' /usr/include/GLES2/gl2.h:613:90: error: 'void __glewVertexAttrib4fv(GLuint, const khronos_float_t*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11363:42: error: previous declaration of 'void (* __glewVertexAttrib4fv)(GLuint, const GLfloat*)' /usr/include/GLES2/gl2.h:614:153: error: 'void __glewVertexAttribPointer(GLuint, GLint, GLenum, GLboolean, GLsizei, const GLvoid*)' redeclared as different kind of symbol /usr/include/GL/glew.h:11370:46: error: previous declaration of 'void (* __glewVertexAttribPointer)(GLuint, GLint, GLenum, GLboolean, GLsizei, const GLvoid*)' In file included from /build/buildd/ball-1.3.2/include/BALL/VIEW/RENDERING/glDisplayList.h:13:0, from /build/buildd/ball-1.3.2/include/BALL/VIEW/RENDERING/glRenderer.h:35, from /build/buildd/ball-1.3.2/include/BALL/VIEW/WIDGETS/scene.h:13, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/gridVisualizationDialog.C:14: /usr/include/qt4/QtOpenGL/qgl.h:74:17: error: conflicting declaration 'typedef khronos_float_t GLdouble' /usr/include/GL/glew.h:238:16: error: 'GLdouble' has a previous declaration as 'typedef double GLdouble' make[3]: *** [CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/gridVisualizationDialog.o] Error 1 make[3]: *** Waiting for unfinished jobs.... In file included from /usr/include/qt4/QtGui/qkeysequence.h:46:0, from /usr/include/qt4/QtGui/QKeySequence:1, from /build/buildd/ball-1.3.2/include/BALL/VIEW/KERNEL/modularWidget.h:18, from /build/buildd/ball-1.3.2/include/BALL/VIEW/DIALOGS/FDPBDialog.h:12, from /build/buildd/ball-1.3.2/source/VIEW/DIALOGS/FDPBDialog.C:7: /usr/include/qt4/QtCore/qstring.h:187:17: note: the mangling of 'va_list' has changed in GCC 4.4 make[3]: Leaving directory `/build/buildd/ball-1.3.2/build' make[2]: *** [CMakeFiles/VIEW.dir/all] Error 2 make[2]: Leaving directory `/build/buildd/ball-1.3.2/build' make[1]: *** [all] Error 2 make[1]: Leaving directory `/build/buildd/ball-1.3.2/build' make: *** [build-stamp] Error 2 dpkg-buildpackage: error: debian/rules build gave error exit status 2 ****************************************************************************** Build finished at 20110410-0553 FAILED [dpkg-buildpackage died] Purging chroot-autobuild/build/buildd/ball-1.3.2 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --purge groff-base libpathplan4 libboost-system1.42-dev libavahi-common3 libxfixes-dev libx11-data m4 fontconfig-config gettext file zlib1g-dev libxaw7 libqt4-sql libasio-dev libqt4-help libcairo2 libfftw3-dev doxygen libqtgui4 texlive-common libboost-math1.42-dev x11-common libgvc5 libqt4-qt3support libx11-dev libxi6 libqt4-opengl-dev libboost-date-time1.42.0 chrpath libjpeg62 tidy x11proto-input-dev libexpat1-dev x11proto-xf86vidmode-dev libxcb-shape0 gs-common libjasper1 libgs9-common libqtcore4 libgles2-mesa libfontconfig1 libcupsimage2 libqt4-script texlive-latex-extra qt4-qmake texlive-fonts-recommended libx11-xcb1 libx11-6 xtrans-dev libgd2-noxpm libglu1-mesa libboost-iostreams1.42.0 libxdamage1 libqt4-gui latex-xcolor libxt6 libqt4-dev libtidy-0.99-0 libmng1 libboost1.42-dev texlive-base libkpathsea5 libglew1.5-dev libegl1-mesa bison texlive-doc-base emacsen-common libpaper1 libboost-dev libegl1-mesa-dev libxml2 cmake-data x11proto-xext-dev libboost-regex1.42.0 libthai-data libgvpr1 libice6 x11proto-gl-dev intltool-debian python2.7-dev libavahi-client3 libxrender1 libpython2.7 texlive-extra-utils libboost-iostreams1.42-dev texlive-latex-base mesa-common-dev libxext-dev libjs-jquery libboost-date-time1.42-dev libcups2 libxau-dev libdatrie1 libxmu-headers libxrender-dev libqt4-declarative libqt4-network libqt4-designer libarchive1 libboost-iostreams-dev libglu1-mesa-dev libavahi-common-data libxft2 x11proto-render-dev libxext6 libpipeline1 libsqlite3-0 libdrm-dev libgsl0ldbl preview-latex-style libxxf86vm-dev libxdamage-dev libsm-dev libaudio2 libxmu6 libxdmcp-dev gsfonts ttf-dejavu-core libpoppler12 fontconfig x11proto-dri2-dev libboost-thread-dev ghostscript libcgraph5 libxpm4 libgles2-mesa-dev libcroco3 python-support libxt-dev libboost-math-dev libqt4-opengl libfreetype6 libglew1.5 libice-dev texlive-latex-recommended graphviz libgl1-mesa-dev x11proto-fixes-dev texlive-pictures python2.7 x11proto-damage-dev libxcb1 libgl1-mesa-glx tex-common libcurl3 libijs-0.35 gs-cjk-resource libboost-date-time-dev html2text flex debhelper libpthread-stubs0 libboost-regex1.42-dev libgs9 libthai0 python libmagic1 libqt4-xmlpatterns python-sip libxcb-shm0 libtiff4 libexpat1 libssl-dev bsdmainutils libcdt4 libxau6 libfftw3-3 mime-support x11proto-core-dev libxcb-xfixes0 libicu-dev libqt4-dbus libxcb1-dev libxfixes3 libxdmcp6 libicu44 libxmu-dev po-debconf libqt4-xml python-sip-dev libboost-serialization1.42-dev libgsl0-dev liblcms1 ed libxmlrpc-core-c3-0 libboost-serialization1.42.0 python-dev man-db libxxf86vm1 cmake libxcb-dri2-0 x11proto-kb-dev libboost-system1.42.0 libqt4-svg libboost-thread1.42.0 libpixman-1-0 libboost-system-dev libgraph4 luatex libpango1.0-0 libpthread-stubs0-dev ucf doxygen-latex libboost-thread1.42-dev gettext-base libunistring0 libqt4-scripttools libjbig2dec0 libqt4-test libsm6 libxcb-render0 texlive-binaries libboost-math1.42.0 libboost-regex-dev libkms1 (Reading database ... 45431 files and directories currently installed.) Removing libasio-dev ... Removing libfftw3-dev ... Removing libqt4-opengl-dev ... Removing chrpath ... Removing tidy ... Purging configuration files for tidy ... Removing gs-common ... Removing texlive-fonts-recommended ... Purging configuration files for texlive-fonts-recommended ... Removing libqt4-gui ... Removing libqt4-dev ... Removing libtidy-0.99-0 ... Purging configuration files for libtidy-0.99-0 ... Removing libglew1.5-dev ... Removing bison ... Removing libboost-dev ... Removing libxrender-dev ... Removing libqt4-declarative ... Purging configuration files for libqt4-declarative ... Removing libboost-iostreams-dev ... Removing libglu1-mesa-dev ... Removing x11proto-render-dev ... Removing libboost-thread-dev ... Removing libgles2-mesa-dev ... Removing libboost-math-dev ... Removing libqt4-opengl ... Purging configuration files for libqt4-opengl ... Removing libglew1.5 ... Purging configuration files for libglew1.5 ... Removing graphviz ... 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Purging configuration files for libxft2 ... Removing libsm-dev ... Removing libaudio2 ... Removing fontconfig ... Purging configuration files for fontconfig ... Removing libcroco3 ... Purging configuration files for libcroco3 ... Removing python-support ... Purging configuration files for python-support ... Removing libice-dev ... Removing x11proto-fixes-dev ... Removing libgl1-mesa-glx ... Purging configuration files for libgl1-mesa-glx ... dpkg: warning: while removing libgl1-mesa-glx, directory '/usr/lib/xorg' not empty so not removed. Removing libcurl3 ... Purging configuration files for libcurl3 ... Removing libthai0 ... Purging configuration files for libthai0 ... Removing libxcb-shm0 ... Purging configuration files for libxcb-shm0 ... Removing bsdmainutils ... Purging configuration files for bsdmainutils ... Removing libcdt4 ... Purging configuration files for libcdt4 ... Removing libxcb-xfixes0 ... Purging configuration files for libxcb-xfixes0 ... Removing libqt4-dbus ... 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Removing x11proto-xext-dev ... Removing libthai-data ... Removing libxrender1 ... Purging configuration files for libxrender1 ... Removing libxau-dev ... Removing libdatrie1 ... Purging configuration files for libdatrie1 ... Removing libxdmcp-dev ... Removing libpthread-stubs0 ... Removing libxfixes3 ... Purging configuration files for libxfixes3 ... Removing x11proto-input-dev ... Removing x11proto-core-dev ... Removing doxygen ... Removing libgs9 ... Purging configuration files for libgs9 ... Removing doxygen-latex ... Removing libjbig2dec0 ... Purging configuration files for libjbig2dec0 ... Removing libjasper1 ... Purging configuration files for libjasper1 ... Removing libgs9-common ... Removing libcupsimage2 ... Purging configuration files for libcupsimage2 ... Removing texlive-latex-extra ... Purging configuration files for texlive-latex-extra ... Removing latex-xcolor ... Purging configuration files for latex-xcolor ... Removing libpaper1 ... Purging configuration files for libpaper1 ... Removing texlive-extra-utils ... Purging configuration files for texlive-extra-utils ... Removing libcups2 ... Purging configuration files for libcups2 ... Removing preview-latex-style ... Purging configuration files for preview-latex-style ... Removing texlive-latex-recommended ... Purging configuration files for texlive-latex-recommended ... Removing texlive-pictures ... Purging configuration files for texlive-pictures ... Removing libijs-0.35 ... Purging configuration files for libijs-0.35 ... Removing gs-cjk-resource ... Purging configuration files for gs-cjk-resource ... Removing python ... Purging configuration files for python ... Removing libtiff4 ... Purging configuration files for libtiff4 ... Removing libavahi-client3 ... Purging configuration files for libavahi-client3 ... Removing texlive-latex-base ... Purging configuration files for texlive-latex-base ... Removing ghostscript ... Removing python2.7 ... Purging configuration files for python2.7 ... Removing libavahi-common3 ... Purging configuration files for libavahi-common3 ... Removing texlive-base ... Purging configuration files for texlive-base ... Removing texlive-doc-base ... Purging configuration files for texlive-doc-base ... Removing libavahi-common-data ... Removing libsqlite3-0 ... Purging configuration files for libsqlite3-0 ... Removing gsfonts ... Purging configuration files for gsfonts ... Removing mime-support ... Purging configuration files for mime-support ... Removing luatex ... Removing texlive-binaries ... Removing libxaw7 ... Purging configuration files for libxaw7 ... Removing texlive-common ... Removing libkpathsea5 ... Purging configuration files for libkpathsea5 ... Removing libxmu6 ... Purging configuration files for libxmu6 ... Removing libpoppler12 ... Purging configuration files for libpoppler12 ... Removing libxpm4 ... Purging configuration files for libxpm4 ... Removing tex-common ... Purging configuration files for tex-common ... Removing liblcms1 ... Purging configuration files for liblcms1 ... Removing ed ... Removing libjpeg62 ... Removing libfontconfig1 ... Purging configuration files for libfontconfig1 ... Removing libxt6 ... Purging configuration files for libxt6 ... Removing libxml2 ... Purging configuration files for libxml2 ... Removing libxext6 ... Purging configuration files for libxext6 ... Removing libfreetype6 ... Purging configuration files for libfreetype6 ... Removing libexpat1 ... Purging configuration files for libexpat1 ... Removing libsm6 ... Purging configuration files for libsm6 ... Removing fontconfig-config ... Purging configuration files for fontconfig-config ... Removing libx11-6 ... Purging configuration files for libx11-6 ... Removing libice6 ... Purging configuration files for libice6 ... Removing ttf-dejavu-core ... Removing libxcb1 ... Purging configuration files for libxcb1 ... Removing libxau6 ... Purging configuration files for libxau6 ... Removing libxdmcp6 ... Purging configuration files for libxdmcp6 ... Removing ucf ... Purging configuration files for ucf ... Removing libx11-data ... Removing x11-common ... Purging configuration files for x11-common ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place ****************************************************************************** Finished at 20110410-0556 Build needed 03:10:59, 466400k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '6b5e6836a3642ee987fe0d48307e0dbc16b30c6e'] Scanning for processes to kill in build /home/buildd/build-6b5e6836a3642ee987fe0d48307e0dbc16b30c6e/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '6b5e6836a3642ee987fe0d48307e0dbc16b30c6e'] Unmounting chroot for build 6b5e6836a3642ee987fe0d48307e0dbc16b30c6e... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '6b5e6836a3642ee987fe0d48307e0dbc16b30c6e'] Removing build 6b5e6836a3642ee987fe0d48307e0dbc16b30c6e