RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux templar 3.8.0-2-mustang #12-Ubuntu SMP Thu Jan 9 09:48:54 UTC 2014 aarch64 Buildd toolchain package versions: launchpad-buildd_126 python-lpbuildd_126 dpkg-dev_1.17.5ubuntu5.3. Syncing the system clock with the buildd NTP service... 8 Apr 20:17:43 ntpdate[12123]: adjust time server 10.211.37.1 offset -0.011069 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-7130253', '/home/buildd/filecache-default/375196632ed04ab4c49a3911b4c32d46ba3c1395'] Unpacking chroot for build PACKAGEBUILD-7130253 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-7130253'] Mounting chroot for build PACKAGEBUILD-7130253 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-7130253', 'deb http://ftpmaster.internal/ubuntu vivid main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu vivid-security main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu vivid-updates main restricted universe multiverse'] Overriding sources.list in build-PACKAGEBUILD-7130253 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-7130253', 'arm64'] Updating debian chroot for build PACKAGEBUILD-7130253 Ign http://ftpmaster.internal vivid InRelease Ign http://ftpmaster.internal vivid-security InRelease Ign http://archive-team.internal vivid InRelease Ign http://ftpmaster.internal vivid-updates InRelease Ign http://archive-team.internal vivid Release.gpg Get:1 http://ftpmaster.internal vivid Release.gpg [933 B] Hit http://archive-team.internal vivid Release Get:2 http://ftpmaster.internal vivid-security Release.gpg [933 B] Ign http://archive-team.internal vivid/main arm64 Packages/DiffIndex Get:3 http://ftpmaster.internal vivid-updates Release.gpg [933 B] Get:4 http://ftpmaster.internal vivid Release [217 kB] Get:5 http://ftpmaster.internal vivid-security Release [59.7 kB] Ign http://archive-team.internal vivid/main Translation-en Hit http://archive-team.internal vivid/main arm64 Packages Get:6 http://ftpmaster.internal vivid-updates Release [59.7 kB] Get:7 http://ftpmaster.internal vivid/main arm64 Packages [1306 kB] Get:8 http://ftpmaster.internal vivid/restricted arm64 Packages [28 B] Get:9 http://ftpmaster.internal vivid/universe arm64 Packages [6199 kB] Get:10 http://ftpmaster.internal vivid/multiverse arm64 Packages [111 kB] Get:11 http://ftpmaster.internal vivid/main Translation-en [792 kB] Get:12 http://ftpmaster.internal vivid/multiverse Translation-en [103 kB] Get:13 http://ftpmaster.internal vivid/restricted Translation-en [4233 B] Get:14 http://ftpmaster.internal vivid/universe Translation-en [4457 kB] Get:15 http://ftpmaster.internal vivid-security/main arm64 Packages [14 B] Get:16 http://ftpmaster.internal vivid-security/restricted arm64 Packages [14 B] Get:17 http://ftpmaster.internal vivid-security/universe arm64 Packages [14 B] Get:18 http://ftpmaster.internal vivid-security/multiverse arm64 Packages [14 B] Get:19 http://ftpmaster.internal vivid-security/main Translation-en [14 B] Get:20 http://ftpmaster.internal vivid-security/multiverse Translation-en [14 B] Get:21 http://ftpmaster.internal vivid-security/restricted Translation-en [14 B] Get:22 http://ftpmaster.internal vivid-security/universe Translation-en [14 B] Get:23 http://ftpmaster.internal vivid-updates/main arm64 Packages [14 B] Get:24 http://ftpmaster.internal vivid-updates/restricted arm64 Packages [14 B] Get:25 http://ftpmaster.internal vivid-updates/universe arm64 Packages [14 B] Get:26 http://ftpmaster.internal vivid-updates/multiverse arm64 Packages [14 B] Get:27 http://ftpmaster.internal vivid-updates/main Translation-en [14 B] Get:28 http://ftpmaster.internal vivid-updates/multiverse Translation-en [14 B] Get:29 http://ftpmaster.internal vivid-updates/restricted Translation-en [14 B] Get:30 http://ftpmaster.internal vivid-updates/universe Translation-en [14 B] Fetched 13.3 MB in 12s (1075 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: adduser dmsetup init libapparmor1 libcap2-bin libcryptsetup4 libdevmapper1.02.1 libkmod2 systemd systemd-sysv udev The following packages will be upgraded: apt apt-transport-https initscripts libapt-pkg4.12 libsystemd0 libudev1 linux-libc-dev patch sysv-rc sysvinit-utils 10 upgraded, 11 newly installed, 0 to remove and 0 not upgraded. Need to get 6838 kB of archives. After this operation, 24.9 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ vivid/main libapparmor1 arm64 2.9.1-0ubuntu9 [22.3 kB] Get:2 http://ftpmaster.internal/ubuntu/ vivid/main libdevmapper1.02.1 arm64 2:1.02.90-2ubuntu1 [93.6 kB] Get:3 http://ftpmaster.internal/ubuntu/ vivid/main dmsetup arm64 2:1.02.90-2ubuntu1 [35.6 kB] Get:4 http://ftpmaster.internal/ubuntu/ vivid/main libudev1 arm64 219-6ubuntu2 [35.0 kB] Get:5 http://ftpmaster.internal/ubuntu/ vivid/main libcryptsetup4 arm64 2:1.6.1-1ubuntu7 [56.6 kB] Get:6 http://ftpmaster.internal/ubuntu/ vivid/main libkmod2 arm64 18-3ubuntu1 [31.1 kB] Get:7 http://ftpmaster.internal/ubuntu/ vivid/main libsystemd0 arm64 219-6ubuntu2 [60.3 kB] Get:8 http://ftpmaster.internal/ubuntu/ vivid/main adduser all 3.113+nmu3ubuntu3 [169 kB] Get:9 http://ftpmaster.internal/ubuntu/ vivid/main udev arm64 219-6ubuntu2 [876 kB] Get:10 http://ftpmaster.internal/ubuntu/ vivid/main libcap2-bin arm64 1:2.24-6 [20.4 kB] Get:11 http://ftpmaster.internal/ubuntu/ vivid/main sysvinit-utils arm64 2.88dsf-53.2ubuntu12 [37.7 kB] Get:12 http://ftpmaster.internal/ubuntu/ vivid/main sysv-rc all 2.88dsf-53.2ubuntu12 [36.9 kB] Get:13 http://ftpmaster.internal/ubuntu/ vivid/main initscripts arm64 2.88dsf-53.2ubuntu12 [27.8 kB] Get:14 http://ftpmaster.internal/ubuntu/ vivid/main systemd arm64 219-6ubuntu2 [2849 kB] Get:15 http://ftpmaster.internal/ubuntu/ vivid/main systemd-sysv arm64 219-6ubuntu2 [14.5 kB] Get:16 http://ftpmaster.internal/ubuntu/ vivid/main init arm64 1.22ubuntu8 [3684 B] Get:17 http://ftpmaster.internal/ubuntu/ vivid/main libapt-pkg4.12 arm64 1.0.9.7ubuntu4 [619 kB] Get:18 http://ftpmaster.internal/ubuntu/ vivid/main apt arm64 1.0.9.7ubuntu4 [978 kB] Get:19 http://ftpmaster.internal/ubuntu/ vivid/main apt-transport-https arm64 1.0.9.7ubuntu4 [24.7 kB] Get:20 http://ftpmaster.internal/ubuntu/ vivid/main linux-libc-dev arm64 3.19.0-12.12 [766 kB] Get:21 http://ftpmaster.internal/ubuntu/ vivid/main patch arm64 2.7.5-1 [81.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6838 kB in 4s (1399 kB/s) Selecting previously unselected package libapparmor1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10638 files and directories currently installed.) Preparing to unpack .../libapparmor1_2.9.1-0ubuntu9_arm64.deb ... Unpacking libapparmor1:arm64 (2.9.1-0ubuntu9) ... Setting up libapparmor1:arm64 (2.9.1-0ubuntu9) ... Processing triggers for libc-bin (2.21-0ubuntu4) ... Selecting previously unselected package libdevmapper1.02.1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10643 files and directories currently installed.) Preparing to unpack .../libdevmapper1.02.1_2%3a1.02.90-2ubuntu1_arm64.deb ... Unpacking libdevmapper1.02.1:arm64 (2:1.02.90-2ubuntu1) ... Selecting previously unselected package dmsetup. Preparing to unpack .../dmsetup_2%3a1.02.90-2ubuntu1_arm64.deb ... Unpacking dmsetup (2:1.02.90-2ubuntu1) ... Setting up libdevmapper1.02.1:arm64 (2:1.02.90-2ubuntu1) ... Setting up dmsetup (2:1.02.90-2ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10657 files and directories currently installed.) Preparing to unpack .../libudev1_219-6ubuntu2_arm64.deb ... Unpacking libudev1:arm64 (219-6ubuntu2) over (219-6ubuntu1) ... Setting up libudev1:arm64 (219-6ubuntu2) ... Processing triggers for libc-bin (2.21-0ubuntu4) ... Selecting previously unselected package libcryptsetup4. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10657 files and directories currently installed.) Preparing to unpack .../libcryptsetup4_2%3a1.6.1-1ubuntu7_arm64.deb ... Unpacking libcryptsetup4 (2:1.6.1-1ubuntu7) ... Setting up libcryptsetup4 (2:1.6.1-1ubuntu7) ... Processing triggers for libc-bin (2.21-0ubuntu4) ... Selecting previously unselected package libkmod2:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10663 files and directories currently installed.) Preparing to unpack .../libkmod2_18-3ubuntu1_arm64.deb ... Unpacking libkmod2:arm64 (18-3ubuntu1) ... Setting up libkmod2:arm64 (18-3ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10668 files and directories currently installed.) Preparing to unpack .../libsystemd0_219-6ubuntu2_arm64.deb ... Unpacking libsystemd0:arm64 (219-6ubuntu2) over (219-6ubuntu1) ... Setting up libsystemd0:arm64 (219-6ubuntu2) ... Processing triggers for libc-bin (2.21-0ubuntu4) ... Selecting previously unselected package adduser. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10668 files and directories currently installed.) Preparing to unpack .../adduser_3.113+nmu3ubuntu3_all.deb ... Unpacking adduser (3.113+nmu3ubuntu3) ... Setting up adduser (3.113+nmu3ubuntu3) ... Selecting previously unselected package udev. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10757 files and directories currently installed.) Preparing to unpack .../udev_219-6ubuntu2_arm64.deb ... Unpacking udev (219-6ubuntu2) ... Setting up udev (219-6ubuntu2) ... A chroot environment has been detected, udev not started. Selecting previously unselected package libcap2-bin. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10875 files and directories currently installed.) Preparing to unpack .../libcap2-bin_1%3a2.24-6_arm64.deb ... Unpacking libcap2-bin (1:2.24-6) ... Setting up libcap2-bin (1:2.24-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10889 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_2.88dsf-53.2ubuntu12_arm64.deb ... Unpacking sysvinit-utils (2.88dsf-53.2ubuntu12) over (2.88dsf-53.2ubuntu11) ... Setting up sysvinit-utils (2.88dsf-53.2ubuntu12) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10889 files and directories currently installed.) Preparing to unpack .../sysv-rc_2.88dsf-53.2ubuntu12_all.deb ... Unpacking sysv-rc (2.88dsf-53.2ubuntu12) over (2.88dsf-53.2ubuntu11) ... Setting up sysv-rc (2.88dsf-53.2ubuntu12) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10889 files and directories currently installed.) Preparing to unpack .../initscripts_2.88dsf-53.2ubuntu12_arm64.deb ... Unpacking initscripts (2.88dsf-53.2ubuntu12) over (2.88dsf-53.2ubuntu11) ... Setting up initscripts (2.88dsf-53.2ubuntu12) ... Selecting previously unselected package systemd. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10889 files and directories currently installed.) Preparing to unpack .../systemd_219-6ubuntu2_arm64.deb ... Unpacking systemd (219-6ubuntu2) ... Setting up systemd (219-6ubuntu2) ... Created symlink from /etc/systemd/system/getty.target.wants/getty@tty1.service to /lib/systemd/system/getty@.service. Created symlink from /etc/systemd/system/multi-user.target.wants/remote-fs.target to /lib/systemd/system/remote-fs.target. Created symlink from /etc/systemd/system/sysinit.target.wants/systemd-timesyncd.service to /lib/systemd/system/systemd-timesyncd.service. Initializing machine ID from random generator. Selecting previously unselected package systemd-sysv. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11550 files and directories currently installed.) Preparing to unpack .../systemd-sysv_219-6ubuntu2_arm64.deb ... Unpacking systemd-sysv (219-6ubuntu2) ... Setting up systemd-sysv (219-6ubuntu2) ... Selecting previously unselected package init. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11567 files and directories currently installed.) Preparing to unpack .../init_1.22ubuntu8_arm64.deb ... Unpacking init (1.22ubuntu8) ... Setting up init (1.22ubuntu8) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11570 files and directories currently installed.) Preparing to unpack .../libapt-pkg4.12_1.0.9.7ubuntu4_arm64.deb ... Unpacking libapt-pkg4.12:arm64 (1.0.9.7ubuntu4) over (1.0.9.7ubuntu3) ... Setting up libapt-pkg4.12:arm64 (1.0.9.7ubuntu4) ... Processing triggers for libc-bin (2.21-0ubuntu4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11570 files and directories currently installed.) Preparing to unpack .../apt_1.0.9.7ubuntu4_arm64.deb ... Unpacking apt (1.0.9.7ubuntu4) over (1.0.9.7ubuntu3) ... Setting up apt (1.0.9.7ubuntu4) ... Processing triggers for libc-bin (2.21-0ubuntu4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11570 files and directories currently installed.) Preparing to unpack .../apt-transport-https_1.0.9.7ubuntu4_arm64.deb ... Unpacking apt-transport-https (1.0.9.7ubuntu4) over (1.0.9.7ubuntu3) ... Preparing to unpack .../linux-libc-dev_3.19.0-12.12_arm64.deb ... Unpacking linux-libc-dev:arm64 (3.19.0-12.12) over (3.19.0-11.11) ... Preparing to unpack .../patch_2.7.5-1_arm64.deb ... Unpacking patch (2.7.5-1) over (2.7.4-2) ... Setting up apt-transport-https (1.0.9.7ubuntu4) ... Setting up linux-libc-dev:arm64 (3.19.0-12.12) ... Setting up patch (2.7.5-1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-7130253', 'arm64', 'vivid', '--nolog', '--batch', '--archive=ubuntu', '--dist=vivid', '--purpose=COPY', '--architecture=arm64', '--comp=universe', 'apophenia_0.999b+ds3-2.dsc'] Initiating build PACKAGEBUILD-7130253 with 8 jobs across 8 processor cores. Kernel reported to sbuild: 3.8.0-2-mustang #12-Ubuntu SMP Thu Jan 9 09:48:54 UTC 2014 aarch64 Automatic build of apophenia_0.999b+ds3-2 on templar by sbuild/arm64 1.170.5 Build started at 20150408-2018 ****************************************************************************** apophenia_0.999b+ds3-2.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 9), autotools-dev, autoconf-archive, gnulib, dh-autoreconf, libtool, pkg-config, help2man, zlib1g-dev, libmysqlclient-dev, libsqlite3-dev, libgsl0-dev, bc, sqlite3 Build-Depends-Indep: doxygen, texlive-latex-recommended, texlive-fonts-recommended, ghostscript, rdfind, symlinks Checking for already installed source dependencies... debhelper: missing autotools-dev: missing autoconf-archive: missing gnulib: missing dh-autoreconf: missing libtool: missing pkg-config: missing help2man: missing zlib1g-dev: missing libmysqlclient-dev: missing libsqlite3-dev: missing libgsl0-dev: missing bc: missing sqlite3: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper autotools-dev autoconf-archive gnulib dh-autoreconf libtool pkg-config help2man zlib1g-dev libmysqlclient-dev libsqlite3-dev libgsl0-dev bc sqlite3 Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autoconf automake autopoint bison bsdmainutils dh-apparmor file gettext gettext-base gperf groff-base intltool-debian libasprintf0c2 libbison-dev libcroco3 libglib2.0-0 libgsl0ldbl libicu52 libintl-perl liblocale-gettext-perl libmagic1 libmysqlclient18 libpipeline1 libsigsegv2 libtext-unidecode-perl libunistring0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml2 m4 man-db mysql-common po-debconf texinfo ucf Suggested packages: gnu-standards autoconf-doc bison-doc wamerican wordlist whois vacation dh-make apparmor-easyprof gettext-doc clisp groff gsl-ref-psdoc gsl-doc-pdf gsl-doc-info gsl-ref-html libintl-xs-perl sqlite3-doc libtool-doc automaken gfortran fortran95-compiler gcj-jdk less www-browser libmail-box-perl texlive-base texlive-latex-base texlive-generic-recommended texinfo-doc-nonfree Recommended packages: curl wget lynx-cur libasprintf-dev libgettextpo-dev libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libxml-sax-expat-perl xml-core libmail-sendmail-perl The following NEW packages will be installed: autoconf autoconf-archive automake autopoint autotools-dev bc bison bsdmainutils debhelper dh-apparmor dh-autoreconf file gettext gettext-base gnulib gperf groff-base help2man intltool-debian libasprintf0c2 libbison-dev libcroco3 libglib2.0-0 libgsl0-dev libgsl0ldbl libicu52 libintl-perl liblocale-gettext-perl libmagic1 libmysqlclient-dev libmysqlclient18 libpipeline1 libsigsegv2 libsqlite3-dev libtext-unidecode-perl libtool libunistring0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml2 m4 man-db mysql-common pkg-config po-debconf sqlite3 texinfo ucf zlib1g-dev 0 upgraded, 51 newly installed, 0 to remove and 0 not upgraded. Need to get 25.2 MB of archives. After this operation, 126 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ vivid/main liblocale-gettext-perl arm64 1.05-8build1 [17.6 kB] Get:2 http://ftpmaster.internal/ubuntu/ vivid/main libmagic1 arm64 1:5.20-1ubuntu2 [200 kB] Get:3 http://ftpmaster.internal/ubuntu/ vivid/main libasprintf0c2 arm64 0.19.2-2ubuntu1 [6314 B] Get:4 http://ftpmaster.internal/ubuntu/ vivid/main libglib2.0-0 arm64 2.44.0-1 [908 kB] Get:5 http://ftpmaster.internal/ubuntu/ vivid/main libicu52 arm64 52.1-8 [6645 kB] Get:6 http://ftpmaster.internal/ubuntu/ vivid/main libpipeline1 arm64 1.4.0-1 [22.3 kB] Get:7 http://ftpmaster.internal/ubuntu/ vivid/main libxml2 arm64 2.9.2+dfsg1-3 [573 kB] Get:8 http://ftpmaster.internal/ubuntu/ vivid/main groff-base arm64 1.22.3-1 [1145 kB] Get:9 http://ftpmaster.internal/ubuntu/ vivid/main bsdmainutils arm64 9.0.6ubuntu1 [171 kB] Get:10 http://ftpmaster.internal/ubuntu/ vivid/main man-db arm64 2.7.0.2-5 [835 kB] Get:11 http://ftpmaster.internal/ubuntu/ vivid/universe autoconf-archive all 20140228-1.1 [731 kB] Get:12 http://ftpmaster.internal/ubuntu/ vivid/main libcroco3 arm64 0.6.8-3 [67.5 kB] Get:13 http://ftpmaster.internal/ubuntu/ vivid/main mysql-common all 5.6.23-1~exp1~ubuntu5 [17.0 kB] Get:14 http://ftpmaster.internal/ubuntu/ vivid/main libmysqlclient18 arm64 5.6.23-1~exp1~ubuntu5 [627 kB] Get:15 http://ftpmaster.internal/ubuntu/ vivid/main libsigsegv2 arm64 2.10-4 [13.3 kB] Get:16 http://ftpmaster.internal/ubuntu/ vivid/main libunistring0 arm64 0.9.3-5.2ubuntu1 [251 kB] Get:17 http://ftpmaster.internal/ubuntu/ vivid/main file arm64 1:5.20-1ubuntu2 [20.2 kB] Get:18 http://ftpmaster.internal/ubuntu/ vivid/main ucf all 3.0030 [55.5 kB] Get:19 http://ftpmaster.internal/ubuntu/ vivid/main gettext-base arm64 0.19.2-2ubuntu1 [45.8 kB] Get:20 http://ftpmaster.internal/ubuntu/ vivid/main m4 arm64 1.4.17-4 [182 kB] Get:21 http://ftpmaster.internal/ubuntu/ vivid/main autoconf all 2.69-8 [321 kB] Get:22 http://ftpmaster.internal/ubuntu/ vivid/main autotools-dev all 20140911.1 [39.6 kB] Get:23 http://ftpmaster.internal/ubuntu/ vivid/main automake all 1:1.14.1-3ubuntu1 [510 kB] Get:24 http://ftpmaster.internal/ubuntu/ vivid/main autopoint all 0.19.2-2ubuntu1 [383 kB] Get:25 http://ftpmaster.internal/ubuntu/ vivid/main bc arm64 1.06.95-9build1 [77.9 kB] Get:26 http://ftpmaster.internal/ubuntu/ vivid/main libbison-dev arm64 2:3.0.2.dfsg-2 [337 kB] Get:27 http://ftpmaster.internal/ubuntu/ vivid/main bison arm64 2:3.0.2.dfsg-2 [229 kB] Get:28 http://ftpmaster.internal/ubuntu/ vivid/main gettext arm64 0.19.2-2ubuntu1 [792 kB] Get:29 http://ftpmaster.internal/ubuntu/ vivid/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:30 http://ftpmaster.internal/ubuntu/ vivid/main po-debconf all 1.0.16+nmu3 [207 kB] Get:31 http://ftpmaster.internal/ubuntu/ vivid/main dh-apparmor all 2.9.1-0ubuntu9 [11.1 kB] Get:32 http://ftpmaster.internal/ubuntu/ vivid/main debhelper all 9.20150101ubuntu1 [727 kB] Get:33 http://ftpmaster.internal/ubuntu/ vivid/main libtool all 2.4.2-1.11 [180 kB] Get:34 http://ftpmaster.internal/ubuntu/ vivid/main dh-autoreconf all 10 [15.3 kB] Get:35 http://ftpmaster.internal/ubuntu/ vivid/main gperf arm64 3.0.4-1 [109 kB] Get:36 http://ftpmaster.internal/ubuntu/ vivid/main libtext-unidecode-perl all 1.22-1 [100 kB] Get:37 http://ftpmaster.internal/ubuntu/ vivid/main libintl-perl all 1.23-1build2 [817 kB] Get:38 http://ftpmaster.internal/ubuntu/ vivid/main libxml-namespacesupport-perl all 1.11-1 [13.2 kB] Get:39 http://ftpmaster.internal/ubuntu/ vivid/main libxml-sax-base-perl all 1.07-1 [21.5 kB] Get:40 http://ftpmaster.internal/ubuntu/ vivid/main libxml-sax-perl all 0.99+dfsg-2ubuntu1 [64.6 kB] Get:41 http://ftpmaster.internal/ubuntu/ vivid/main libxml-libxml-perl arm64 2.0116+dfsg-1build1 [322 kB] Get:42 http://ftpmaster.internal/ubuntu/ vivid/main texinfo arm64 5.2.0.dfsg.1-6 [564 kB] Get:43 http://ftpmaster.internal/ubuntu/ vivid/universe gnulib all 20140202+stable-2 [3612 kB] Get:44 http://ftpmaster.internal/ubuntu/ vivid/main help2man arm64 1.46.5 [98.8 kB] Get:45 http://ftpmaster.internal/ubuntu/ vivid/main libgsl0ldbl arm64 1.16+dfsg-2build1 [671 kB] Get:46 http://ftpmaster.internal/ubuntu/ vivid/main libgsl0-dev arm64 1.16+dfsg-2build1 [800 kB] Get:47 http://ftpmaster.internal/ubuntu/ vivid/main zlib1g-dev arm64 1:1.2.8.dfsg-2ubuntu1 [163 kB] Get:48 http://ftpmaster.internal/ubuntu/ vivid/main libmysqlclient-dev arm64 5.6.23-1~exp1~ubuntu5 [924 kB] Get:49 http://ftpmaster.internal/ubuntu/ vivid/main libsqlite3-dev arm64 3.8.7.4-1 [415 kB] Get:50 http://ftpmaster.internal/ubuntu/ vivid/main pkg-config arm64 0.28-1ubuntu1 [38.4 kB] Get:51 http://ftpmaster.internal/ubuntu/ vivid/main sqlite3 arm64 3.8.7.4-1 [29.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 25.2 MB in 22s (1126 kB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11570 files and directories currently installed.) Preparing to unpack .../liblocale-gettext-perl_1.05-8build1_arm64.deb ... Unpacking liblocale-gettext-perl (1.05-8build1) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../libmagic1_1%3a5.20-1ubuntu2_arm64.deb ... Unpacking libmagic1:arm64 (1:5.20-1ubuntu2) ... Selecting previously unselected package libasprintf0c2:arm64. 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Unpacking sqlite3 (3.8.7.4-1) ... Setting up liblocale-gettext-perl (1.05-8build1) ... Setting up libmagic1:arm64 (1:5.20-1ubuntu2) ... Setting up libasprintf0c2:arm64 (0.19.2-2ubuntu1) ... Setting up libglib2.0-0:arm64 (2.44.0-1) ... No schema files found: doing nothing. Setting up libicu52:arm64 (52.1-8) ... Setting up libpipeline1:arm64 (1.4.0-1) ... Setting up libxml2:arm64 (2.9.2+dfsg1-3) ... Setting up groff-base (1.22.3-1) ... Setting up bsdmainutils (9.0.6ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up man-db (2.7.0.2-5) ... Not building database; man-db/auto-update is not 'true'. Setting up autoconf-archive (20140228-1.1) ... Setting up libcroco3:arm64 (0.6.8-3) ... Setting up mysql-common (5.6.23-1~exp1~ubuntu5) ... update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libmysqlclient18:arm64 (5.6.23-1~exp1~ubuntu5) ... Setting up libsigsegv2:arm64 (2.10-4) ... Setting up libunistring0:arm64 (0.9.3-5.2ubuntu1) ... Setting up file (1:5.20-1ubuntu2) ... Setting up ucf (3.0030) ... Setting up gettext-base (0.19.2-2ubuntu1) ... Setting up m4 (1.4.17-4) ... Setting up autoconf (2.69-8) ... Setting up autotools-dev (20140911.1) ... Setting up automake (1:1.14.1-3ubuntu1) ... update-alternatives: using /usr/bin/automake-1.14 to provide /usr/bin/automake (automake) in auto mode Setting up autopoint (0.19.2-2ubuntu1) ... Setting up bc (1.06.95-9build1) ... Setting up libbison-dev:arm64 (2:3.0.2.dfsg-2) ... Setting up bison (2:3.0.2.dfsg-2) ... update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode Setting up gettext (0.19.2-2ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu3) ... Setting up dh-apparmor (2.9.1-0ubuntu9) ... Setting up debhelper (9.20150101ubuntu1) ... Setting up libtool (2.4.2-1.11) ... Setting up dh-autoreconf (10) ... Setting up gperf (3.0.4-1) ... Setting up libtext-unidecode-perl (1.22-1) ... Setting up libintl-perl (1.23-1build2) ... Setting up libxml-namespacesupport-perl (1.11-1) ... Setting up libxml-sax-base-perl (1.07-1) ... Setting up libxml-sax-perl (0.99+dfsg-2ubuntu1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0116+dfsg-1build1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up texinfo (5.2.0.dfsg.1-6) ... Setting up gnulib (20140202+stable-2) ... Setting up help2man (1.46.5) ... Setting up libgsl0ldbl (1.16+dfsg-2build1) ... Setting up libgsl0-dev (1.16+dfsg-2build1) ... Setting up zlib1g-dev:arm64 (1:1.2.8.dfsg-2ubuntu1) ... Setting up libmysqlclient-dev (5.6.23-1~exp1~ubuntu5) ... Setting up libsqlite3-dev:arm64 (3.8.7.4-1) ... Setting up pkg-config (0.28-1ubuntu1) ... Setting up sqlite3 (3.8.7.4-1) ... Processing triggers for libc-bin (2.21-0ubuntu4) ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.21-0ubuntu4 make_4.0-8.1 dpkg-dev_1.17.24ubuntu1 gcc-4.9_4.9.2-10ubuntu12 g++-4.9_4.9.2-10ubuntu12 binutils_2.25-5ubuntu6 libstdc++-4.9-dev_4.9.2-10ubuntu12 libstdc++6_4.9.2-10ubuntu12 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::Quilt gpgv: Signature made Wed Oct 15 14:12:38 2014 UTC using RSA key ID 326D8438 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./apophenia_0.999b+ds3-2.dsc dpkg-source: info: extracting apophenia in apophenia-0.999b+ds3 dpkg-source: info: unpacking apophenia_0.999b+ds3.orig.tar.gz dpkg-source: info: unpacking apophenia_0.999b+ds3-2.debian.tar.xz dpkg-source: info: applying upstream-wipeout-exit.patch dpkg-source: info: applying upstream-update-docs_doxygen_conf_in.patch dpkg-source: info: applying debianization.patch dpkg-source: info: applying debianization-help2man.patch dpkg-source: info: applying debianization-documentation.patch dpkg-source: info: applying debianization-bug-597187_757967-mysql_config.patch dpkg-source: info: applying debianization-adhoc.patch dpkg-buildpackage: source package apophenia dpkg-buildpackage: source version 0.999b+ds3-2 dpkg-buildpackage: source distribution unstable dpkg-source --before-build apophenia-0.999b+ds3 dpkg-buildpackage: host architecture arm64 dpkg-source: info: using options from apophenia-0.999b+ds3/debian/source/options: --compression=xz --compression-level=9 /usr/bin/fakeroot debian/rules clean dh clean --with autoreconf dh_testdir dh_auto_clean dh_autoreconf_clean dh_clean debian/rules build-arch dh build-arch --with autoreconf dh_testdir -a dh_autoreconf -a aclocal: warning: couldn't open directory 'm4': No such file or directory libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, `build-aux'. libtoolize: copying file `build-aux/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIR, `m4'. libtoolize: copying file `m4/libtool.m4' libtoolize: copying file `m4/ltoptions.m4' libtoolize: copying file `m4/ltsugar.m4' libtoolize: copying file `m4/ltversion.m4' libtoolize: copying file `m4/lt~obsolete.m4' configure.ac:19: installing 'build-aux/compile' configure.ac:19: installing 'build-aux/config.guess' configure.ac:19: installing 'build-aux/config.sub' configure.ac:12: installing 'build-aux/install-sh' configure.ac:12: installing 'build-aux/missing' Makefile.am: installing './INSTALL' Makefile.am: installing 'build-aux/depcomp' cmd/Makefile.am:27: warning: '%'-style pattern rules are a GNU make extension automake: warning: source file '$(top_builddir)/eg/apop_map_row.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/apop_map_row' automake: warning: possible forward-incompatibility. automake: At least a source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, automake: this behaviour will change in future Automake versions: they will automake: unconditionally cause object files to be placed in the same subdirectory automake: of the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. automake: warning: source file '$(top_builddir)/eg/binning.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/binning' automake: warning: source file '$(top_builddir)/eg/db_fns.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/db_fns' automake: warning: source file '$(top_builddir)/eg/dconstrain.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/dconstrain' automake: warning: source file '$(top_builddir)/eg/dot_products.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/dot_products' automake: warning: source file '$(top_builddir)/eg/draw_to_db.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/draw_to_db' automake: warning: source file '$(top_builddir)/eg/fake_logit.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/fake_logit' automake: warning: source file '$(top_builddir)/eg/fix_params.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/fix_params' automake: warning: source file '$(top_builddir)/eg/hills2.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/hills2' automake: warning: source file '$(top_builddir)/eg/iv.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/iv' automake: warning: source file '$(top_builddir)/eg/jacobian.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/jacobian' automake: warning: source file '$(top_builddir)/eg/ks_tests.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/ks_tests' automake: warning: source file '$(top_builddir)/eg/normalizations.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/normalizations' automake: warning: source file '$(top_builddir)/eg/parameterization.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/parameterization' automake: warning: source file '$(top_builddir)/eg/pmf_test.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/pmf_test' automake: warning: source file '$(top_builddir)/eg/simple_subsets.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/simple_subsets' automake: warning: source file '$(top_builddir)/eg/some_cdfs.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/some_cdfs' automake: warning: source file '$(top_builddir)/eg/stack_models.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/stack_models' automake: warning: source file '$(top_builddir)/eg/test_distances.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/test_distances' automake: warning: source file '$(top_builddir)/eg/test_fisher.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/test_fisher' automake: warning: source file '$(top_builddir)/eg/test_harmonic.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/test_harmonic' automake: warning: source file '$(top_builddir)/eg/test_kl_divergence.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/test_kl_divergence' automake: warning: source file '$(top_builddir)/eg/test_pruning.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/test_pruning' automake: warning: source file '$(top_builddir)/eg/test_ranks.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/test_ranks' automake: warning: source file '$(top_builddir)/eg/test_regex.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/test_regex' automake: warning: source file '$(top_builddir)/eg/test_updating.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:1: while processing program '$(top_builddir)/eg/test_updating' parallel-tests: installing 'build-aux/test-driver' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/buildd/apophenia-0.999b+ds3' dh_auto_configure -- --enable-maintainer-mode checking whether make supports nested variables... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether to enable maintainer-specific portions of Makefiles... yes checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert aarch64-unknown-linux-gnu file names to aarch64-unknown-linux-gnu format... func_convert_file_noop checking how to convert aarch64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking if LD -Wl,--version-script works... yes checking for help2man... /usr/bin/help2man checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) none checking for gcc option to accept ISO C99... -std=gnu99 checking if compiler needs -Werror to reject unknown flags... no checking for the pthreads library -lpthreads... no checking whether pthreads work without any flags... no checking whether pthreads work with -Kthread... no checking whether pthreads work with -kthread... no checking for the pthreads library -llthread... no checking whether pthreads work with -pthread... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking for gcc -std=gnu99 option to support OpenMP... -fopenmp checking for cos in -lm... yes checking for gsl-config... /usr/bin/gsl-config checking for GSL - version >= 1.12.0... yes checking for mysql_config... /usr/bin/mysql_config checking for SQLite3 library >= 3.0.0... yes checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking for ANSI C header files... (cached) yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdint.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for unistd.h... (cached) yes checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for size_t... (cached) yes checking whether struct tm is in sys/time.h or time.h... time.h checking for ptrdiff_t... yes checking for __attribute__... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking for working strtod... yes checking for floor... no checking for memset... yes checking for pow... no checking for regcomp... yes checking for sqrt... no checking for strcasecmp... yes checking for asprintf... yes checking for bc... /usr/bin/bc checking for sqlite3... /usr/bin/sqlite3 checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating apophenia.pc config.status: creating Makefile config.status: creating transform/Makefile config.status: creating model/Makefile config.status: creating cmd/Makefile config.status: creating tests/Makefile config.status: creating docs/doxygen.conf config.status: creating docs/Makefile config.status: creating eg/Makefile config.status: creating tests/utilities_test config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/buildd/apophenia-0.999b+ds3' dh_auto_build -a make[1]: Entering directory '/build/buildd/apophenia-0.999b+ds3' make all-recursive make[2]: Entering directory '/build/buildd/apophenia-0.999b+ds3' Making all in transform make[3]: Entering directory '/build/buildd/apophenia-0.999b+ds3/transform' /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapoptransform_la-apop_dcompose.lo `test -f 'apop_dcompose.c' || echo './'`apop_dcompose.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_dcompose.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_dcompose.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_dcompose.c -o libapoptransform_la-apop_dcompose.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapoptransform_la-apop_dconstrain.lo `test -f 'apop_dconstrain.c' || echo './'`apop_dconstrain.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_dconstrain.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_dconstrain.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_dconstrain.c -o libapoptransform_la-apop_dconstrain.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapoptransform_la-apop_fix_params.lo `test -f 'apop_fix_params.c' || echo './'`apop_fix_params.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_fix_params.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_fix_params.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_fix_params.c -o libapoptransform_la-apop_fix_params.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapoptransform_la-apop_coordinate_transform.lo `test -f 'apop_coordinate_transform.c' || echo './'`apop_coordinate_transform.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_coordinate_transform.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_coordinate_transform.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_coordinate_transform.c -o libapoptransform_la-apop_coordinate_transform.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapoptransform_la-apop_mixture.lo `test -f 'apop_mixture.c' || echo './'`apop_mixture.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_mixture.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_mixture.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_mixture.c -o libapoptransform_la-apop_mixture.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapoptransform_la-apop_stack.lo `test -f 'apop_stack.c' || echo './'`apop_stack.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_stack.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_stack.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_stack.c -o libapoptransform_la-apop_stack.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link gcc -std=gnu99 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-Bsymbolic-functions -Wl,-z,relro -o libapoptransform.la libapoptransform_la-apop_dcompose.lo libapoptransform_la-apop_dconstrain.lo libapoptransform_la-apop_fix_params.lo libapoptransform_la-apop_coordinate_transform.lo libapoptransform_la-apop_mixture.lo libapoptransform_la-apop_stack.lo libtool: link: ar cru .libs/libapoptransform.a .libs/libapoptransform_la-apop_dcompose.o .libs/libapoptransform_la-apop_dconstrain.o .libs/libapoptransform_la-apop_fix_params.o .libs/libapoptransform_la-apop_coordinate_transform.o .libs/libapoptransform_la-apop_mixture.o .libs/libapoptransform_la-apop_stack.o libtool: link: ranlib .libs/libapoptransform.a libtool: link: ( cd ".libs" && rm -f "libapoptransform.la" && ln -s "../libapoptransform.la" "libapoptransform.la" ) make[3]: Leaving directory '/build/buildd/apophenia-0.999b+ds3/transform' Making all in model make[3]: Entering directory '/build/buildd/apophenia-0.999b+ds3/model' /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_bernoulli.lo `test -f 'apop_bernoulli.c' || echo './'`apop_bernoulli.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_bernoulli.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_bernoulli.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_bernoulli.c -o libapopmodel_la-apop_bernoulli.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_beta.lo `test -f 'apop_beta.c' || 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-I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_dirichlet.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_dirichlet.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_dirichlet.c -o libapopmodel_la-apop_dirichlet.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_exponential.lo `test -f 'apop_exponential.c' || echo './'`apop_exponential.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_exponential.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_exponential.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_exponential.c -o libapopmodel_la-apop_exponential.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_gamma.lo `test -f 'apop_gamma.c' || echo './'`apop_gamma.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_gamma.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_gamma.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_gamma.c -o libapopmodel_la-apop_gamma.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_histogram.lo `test -f 'apop_histogram.c' || echo './'`apop_histogram.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_histogram.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_histogram.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_histogram.c -o libapopmodel_la-apop_histogram.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_loess.lo `test -f 'apop_loess.c' || echo './'`apop_loess.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_loess.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_loess.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_loess.c -o libapopmodel_la-apop_loess.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_multinomial.lo `test -f 'apop_multinomial.c' || echo './'`apop_multinomial.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_multinomial.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_multinomial.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_multinomial.c -o libapopmodel_la-apop_multinomial.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_multivariate_normal.lo `test -f 'apop_multivariate_normal.c' || echo './'`apop_multivariate_normal.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_multivariate_normal.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_multivariate_normal.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_multivariate_normal.c -o libapopmodel_la-apop_multivariate_normal.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_normal.lo `test -f 'apop_normal.c' || echo './'`apop_normal.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_normal.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_normal.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_normal.c -o libapopmodel_la-apop_normal.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_ols.lo `test -f 'apop_ols.c' || echo './'`apop_ols.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_ols.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_ols.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_ols.c -o libapopmodel_la-apop_ols.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_pmf.lo `test -f 'apop_pmf.c' || echo './'`apop_pmf.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_pmf.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_pmf.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_pmf.c -o libapopmodel_la-apop_pmf.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_poisson.lo `test -f 'apop_poisson.c' || echo './'`apop_poisson.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_poisson.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_poisson.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_poisson.c -o libapopmodel_la-apop_poisson.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_probit.lo `test -f 'apop_probit.c' || echo './'`apop_probit.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_probit.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_probit.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_probit.c -o libapopmodel_la-apop_probit.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_t.lo `test -f 'apop_t.c' || echo './'`apop_t.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_t.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_t.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_t.c -o libapopmodel_la-apop_t.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_uniform.lo `test -f 'apop_uniform.c' || echo './'`apop_uniform.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_uniform.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_uniform.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_uniform.c -o libapopmodel_la-apop_uniform.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_wishart.lo `test -f 'apop_wishart.c' || echo './'`apop_wishart.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_wishart.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_wishart.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_wishart.c -o libapopmodel_la-apop_wishart.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_yule.lo `test -f 'apop_yule.c' || echo './'`apop_yule.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_yule.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_yule.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_yule.c -o libapopmodel_la-apop_yule.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopmodel_la-apop_zipf.lo `test -f 'apop_zipf.c' || echo './'`apop_zipf.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_zipf.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_zipf.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_zipf.c -o libapopmodel_la-apop_zipf.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link gcc -std=gnu99 -I .. -pthread -fopenmp -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-Bsymbolic-functions -Wl,-z,relro -o libapopmodel.la libapopmodel_la-apop_bernoulli.lo libapopmodel_la-apop_beta.lo libapopmodel_la-apop_dirichlet.lo libapopmodel_la-apop_exponential.lo libapopmodel_la-apop_gamma.lo libapopmodel_la-apop_histogram.lo libapopmodel_la-apop_loess.lo libapopmodel_la-apop_multinomial.lo libapopmodel_la-apop_multivariate_normal.lo libapopmodel_la-apop_normal.lo libapopmodel_la-apop_ols.lo libapopmodel_la-apop_pmf.lo libapopmodel_la-apop_poisson.lo libapopmodel_la-apop_probit.lo libapopmodel_la-apop_t.lo libapopmodel_la-apop_uniform.lo libapopmodel_la-apop_wishart.lo libapopmodel_la-apop_yule.lo libapopmodel_la-apop_zipf.lo libtool: link: ar cru .libs/libapopmodel.a .libs/libapopmodel_la-apop_bernoulli.o .libs/libapopmodel_la-apop_beta.o .libs/libapopmodel_la-apop_dirichlet.o .libs/libapopmodel_la-apop_exponential.o .libs/libapopmodel_la-apop_gamma.o .libs/libapopmodel_la-apop_histogram.o .libs/libapopmodel_la-apop_loess.o .libs/libapopmodel_la-apop_multinomial.o .libs/libapopmodel_la-apop_multivariate_normal.o .libs/libapopmodel_la-apop_normal.o .libs/libapopmodel_la-apop_ols.o .libs/libapopmodel_la-apop_pmf.o .libs/libapopmodel_la-apop_poisson.o .libs/libapopmodel_la-apop_probit.o .libs/libapopmodel_la-apop_t.o .libs/libapopmodel_la-apop_uniform.o .libs/libapopmodel_la-apop_wishart.o .libs/libapopmodel_la-apop_yule.o .libs/libapopmodel_la-apop_zipf.o libtool: link: ranlib .libs/libapopmodel.a libtool: link: ( cd ".libs" && rm -f "libapopmodel.la" && ln -s "../libapopmodel.la" "libapopmodel.la" ) make[3]: Leaving directory '/build/buildd/apophenia-0.999b+ds3/model' Making all in . make[3]: Entering directory '/build/buildd/apophenia-0.999b+ds3' /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -Wno-unused-result -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o asprintf.lo asprintf.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -Wno-unused-result -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c asprintf.c -fPIC -DPIC -o .libs/asprintf.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -Wno-unused-result -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c asprintf.c -o asprintf.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_arms.lo `test -f 'apop_arms.c' || echo './'`apop_arms.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_arms.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_arms.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_arms.c -o libapopkernel_la-apop_arms.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_asst.lo `test -f 'apop_asst.c' || echo './'`apop_asst.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_asst.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_asst.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_asst.c -o libapopkernel_la-apop_asst.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_bootstrap.lo `test -f 'apop_bootstrap.c' || echo './'`apop_bootstrap.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_bootstrap.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_bootstrap.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_bootstrap.c -o libapopkernel_la-apop_bootstrap.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_conversions.lo `test -f 'apop_conversions.c' || echo './'`apop_conversions.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_conversions.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_conversions.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_conversions.c -o libapopkernel_la-apop_conversions.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_data.lo `test -f 'apop_data.c' || echo './'`apop_data.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_data.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_data.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_data.c -o libapopkernel_la-apop_data.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_db.lo `test -f 'apop_db.c' || echo './'`apop_db.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_db.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_db.o In file included from /usr/include/mysql/my_global.h:68:0, from apop_db_mysql.c:6, from apop_db.c:35: /usr/include/mysql/my_config.h:21:0: warning: "_GNU_SOURCE" redefined #define _GNU_SOURCE 1 ^ In file included from apop_internal.h:83:0, from apop_db.c:6: apop.h:21:0: note: this is the location of the previous definition #define _GNU_SOURCE //for asprintf ^ libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_db.c -o libapopkernel_la-apop_db.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_fexact.lo `test -f 'apop_fexact.c' || echo './'`apop_fexact.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_fexact.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_fexact.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_fexact.c -o libapopkernel_la-apop_fexact.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_hist.lo `test -f 'apop_hist.c' || echo './'`apop_hist.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_hist.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_hist.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_hist.c -o libapopkernel_la-apop_hist.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_linear_algebra.lo `test -f 'apop_linear_algebra.c' || echo './'`apop_linear_algebra.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_linear_algebra.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_linear_algebra.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_linear_algebra.c -o libapopkernel_la-apop_linear_algebra.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_linear_constraint.lo `test -f 'apop_linear_constraint.c' || echo './'`apop_linear_constraint.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_linear_constraint.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_linear_constraint.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_linear_constraint.c -o libapopkernel_la-apop_linear_constraint.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_mapply.lo `test -f 'apop_mapply.c' || echo './'`apop_mapply.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_mapply.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_mapply.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_mapply.c -o libapopkernel_la-apop_mapply.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_mcmc.lo `test -f 'apop_mcmc.c' || echo './'`apop_mcmc.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_mcmc.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_mcmc.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_mcmc.c -o libapopkernel_la-apop_mcmc.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_missing_data.lo `test -f 'apop_missing_data.c' || echo './'`apop_missing_data.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_missing_data.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_missing_data.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_missing_data.c -o libapopkernel_la-apop_missing_data.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_mle.lo `test -f 'apop_mle.c' || echo './'`apop_mle.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_mle.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_mle.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_mle.c -o libapopkernel_la-apop_mle.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_model.lo `test -f 'apop_model.c' || echo './'`apop_model.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_model.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_model.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_model.c -o libapopkernel_la-apop_model.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_name.lo `test -f 'apop_name.c' || echo './'`apop_name.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_name.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_name.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_name.c -o libapopkernel_la-apop_name.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_output.lo `test -f 'apop_output.c' || echo './'`apop_output.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_output.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_output.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_output.c -o libapopkernel_la-apop_output.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_rake.lo `test -f 'apop_rake.c' || echo './'`apop_rake.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_rake.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_rake.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_rake.c -o libapopkernel_la-apop_rake.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_regression.lo `test -f 'apop_regression.c' || echo './'`apop_regression.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_regression.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_regression.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_regression.c -o libapopkernel_la-apop_regression.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_settings.lo `test -f 'apop_settings.c' || echo './'`apop_settings.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_settings.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_settings.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_settings.c -o libapopkernel_la-apop_settings.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_smoothing.lo `test -f 'apop_smoothing.c' || echo './'`apop_smoothing.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_smoothing.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_smoothing.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_smoothing.c -o libapopkernel_la-apop_smoothing.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_sort.lo `test -f 'apop_sort.c' || echo './'`apop_sort.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_sort.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_sort.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_sort.c -o libapopkernel_la-apop_sort.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_stats.lo `test -f 'apop_stats.c' || echo './'`apop_stats.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_stats.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_stats.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_stats.c -o libapopkernel_la-apop_stats.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_tests.lo `test -f 'apop_tests.c' || echo './'`apop_tests.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_tests.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_tests.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_tests.c -o libapopkernel_la-apop_tests.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_update.lo `test -f 'apop_update.c' || echo './'`apop_update.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_update.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_update.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_update.c -o libapopkernel_la-apop_update.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o libapopkernel_la-apop_vtables.lo `test -f 'apop_vtables.c' || echo './'`apop_vtables.c libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_vtables.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_vtables.o libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c apop_vtables.c -o libapopkernel_la-apop_vtables.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=link gcc -std=gnu99 -pthread -fopenmp -I/usr/include/mysql -DBIG_JOINS=1 -fabi-version=2 -fno-omit-frame-pointer -fno-strict-aliasing -I/usr/include -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-Bsymbolic-functions -Wl,-z,relro -o libapopkernel.la libapopkernel_la-apop_arms.lo libapopkernel_la-apop_asst.lo libapopkernel_la-apop_bootstrap.lo libapopkernel_la-apop_conversions.lo libapopkernel_la-apop_data.lo libapopkernel_la-apop_db.lo libapopkernel_la-apop_fexact.lo libapopkernel_la-apop_hist.lo libapopkernel_la-apop_linear_algebra.lo libapopkernel_la-apop_linear_constraint.lo libapopkernel_la-apop_mapply.lo libapopkernel_la-apop_mcmc.lo libapopkernel_la-apop_missing_data.lo libapopkernel_la-apop_mle.lo libapopkernel_la-apop_model.lo libapopkernel_la-apop_name.lo libapopkernel_la-apop_output.lo libapopkernel_la-apop_rake.lo libapopkernel_la-apop_regression.lo libapopkernel_la-apop_settings.lo libapopkernel_la-apop_smoothing.lo libapopkernel_la-apop_sort.lo libapopkernel_la-apop_stats.lo libapopkernel_la-apop_tests.lo libapopkernel_la-apop_update.lo libapopkernel_la-apop_vtables.lo libtool: link: ar cru .libs/libapopkernel.a .libs/libapopkernel_la-apop_arms.o .libs/libapopkernel_la-apop_asst.o .libs/libapopkernel_la-apop_bootstrap.o .libs/libapopkernel_la-apop_conversions.o .libs/libapopkernel_la-apop_data.o .libs/libapopkernel_la-apop_db.o .libs/libapopkernel_la-apop_fexact.o .libs/libapopkernel_la-apop_hist.o .libs/libapopkernel_la-apop_linear_algebra.o .libs/libapopkernel_la-apop_linear_constraint.o .libs/libapopkernel_la-apop_mapply.o .libs/libapopkernel_la-apop_mcmc.o .libs/libapopkernel_la-apop_missing_data.o .libs/libapopkernel_la-apop_mle.o .libs/libapopkernel_la-apop_model.o .libs/libapopkernel_la-apop_name.o .libs/libapopkernel_la-apop_output.o .libs/libapopkernel_la-apop_rake.o .libs/libapopkernel_la-apop_regression.o .libs/libapopkernel_la-apop_settings.o .libs/libapopkernel_la-apop_smoothing.o .libs/libapopkernel_la-apop_sort.o .libs/libapopkernel_la-apop_stats.o .libs/libapopkernel_la-apop_tests.o .libs/libapopkernel_la-apop_update.o .libs/libapopkernel_la-apop_vtables.o libtool: link: ranlib .libs/libapopkernel.a libtool: link: ( cd ".libs" && rm -f "libapopkernel.la" && ln -s "../libapopkernel.la" "libapopkernel.la" ) /bin/bash ./libtool --tag=CC --mode=link gcc -std=gnu99 -Wno-unused-result -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -version-info 0:0:0 -Wl,--version-script=./apophenia.map -Wl,-Bsymbolic-functions -Wl,-z,relro -o libapophenia.la -rpath /usr/lib/aarch64-linux-gnu asprintf.lo libapopkernel.la transform/libapoptransform.la model/libapopmodel.la -L/usr/lib/aarch64-linux-gnu -lmysqlclient -lpthread -lm -L/usr/lib -lsqlite3 -L/usr/lib -lgsl -lgslcblas -lm -lm libtool: link: gcc -shared -fPIC -DPIC .libs/asprintf.o -Wl,--whole-archive ./.libs/libapopkernel.a transform/.libs/libapoptransform.a model/.libs/libapopmodel.a -Wl,--no-whole-archive -L/usr/lib/aarch64-linux-gnu -lmysqlclient -lpthread -L/usr/lib /usr/lib/aarch64-linux-gnu/libsqlite3.so -lgsl -lgslcblas -lm -O2 -O3 -Wl,--version-script=./apophenia.map -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libapophenia.so.0 -o .libs/libapophenia.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libapophenia.so.0" && ln -s "libapophenia.so.0.0.0" "libapophenia.so.0") libtool: link: (cd ".libs" && rm -f "libapophenia.so" && ln -s "libapophenia.so.0.0.0" "libapophenia.so") libtool: link: 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../.libs/libapophenia.so -L/usr/lib -lgsl -lgslcblas -lm -fopenmp -pthread gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -I .. -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o apop_plot_query.o apop_plot_query.c /bin/bash ../libtool --tag=CC --mode=link gcc -std=gnu99 -I .. -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-Bsymbolic-functions -Wl,-z,relro -o apop_plot_query apop_plot_query.o ../libapophenia.la -L/usr/lib -lgsl -lgslcblas -lm libtool: link: gcc -std=gnu99 -I .. -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/apop_plot_query apop_plot_query.o ../.libs/libapophenia.so -L/usr/lib -lgsl -lgslcblas -lm -fopenmp -pthread /usr/bin/help2man \ -s 1 \ --manual="Apophenia" --version-string="0.999b" --source="Apophenia (Debian 0.999b+ds3-2)" --libtool --no-info \ -I ../debian/man/apop_text_to_db.h2m \ -n "command line utility to convert a text file into a database table" \ -o apop_text_to_db.1 \ ../cmd/apop_text_to_db /usr/bin/help2man \ -s 1 \ --manual="Apophenia" --version-string="0.999b" --source="Apophenia (Debian 0.999b+ds3-2)" --libtool --no-info \ -I ../debian/man/apop_db_to_crosstab.h2m \ -n "command line utility to convert a three-column table to a crosstab" \ -o apop_db_to_crosstab.1 \ ../cmd/apop_db_to_crosstab /usr/bin/help2man \ -s 1 \ --manual="Apophenia" --version-string="0.999b" --source="Apophenia (Debian 0.999b+ds3-2)" --libtool --no-info \ -I ../debian/man/apop_plot_query.h2m \ -n "command line utility to take in a query and put out a Gnuplot table file" \ -o apop_plot_query.1 \ ../cmd/apop_plot_query make[3]: Leaving directory '/build/buildd/apophenia-0.999b+ds3/cmd' Making all in tests make[3]: Entering directory '/build/buildd/apophenia-0.999b+ds3/tests' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/buildd/apophenia-0.999b+ds3/tests' Making all in docs make[3]: Entering directory '/build/buildd/apophenia-0.999b+ds3/docs' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/buildd/apophenia-0.999b+ds3/docs' Making all in eg make[3]: Entering directory '/build/buildd/apophenia-0.999b+ds3/eg' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/buildd/apophenia-0.999b+ds3/eg' make[2]: Leaving directory '/build/buildd/apophenia-0.999b+ds3' make[1]: Leaving directory '/build/buildd/apophenia-0.999b+ds3' debian/rules override_dh_auto_test make[1]: Entering directory '/build/buildd/apophenia-0.999b+ds3' /usr/bin/make -C tests check || cat tests/test-suite.log make[2]: Entering directory '/build/buildd/apophenia-0.999b+ds3/tests' /usr/bin/make db_tests distribution_tests error_test nist_tests rake_test sort_example test_apop test_kernel_ll update_via_rng ../eg/apop_map_row ../eg/binning ../eg/dconstrain ../eg/draw_to_db ../eg/db_fns ../eg/dot_products ../eg/fake_logit ../eg/fix_params ../eg/hills2 ../eg/iv ../eg/jacobian ../eg/ks_tests ../eg/normalizations ../eg/parameterization ../eg/pmf_test ../eg/simple_subsets ../eg/some_cdfs ../eg/stack_models ../eg/test_distances ../eg/test_fisher ../eg/test_harmonic ../eg/test_kl_divergence ../eg/test_pruning ../eg/test_ranks ../eg/test_regex ../eg/test_updating make[3]: Entering directory '/build/buildd/apophenia-0.999b+ds3/tests' gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../tests/\" -I../tests -I.. -I/usr/include -Wno-unused-result -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o db_tests.o db_tests.c /bin/bash ../libtool --tag=CC --mode=link gcc -std=gnu99 -DTesting -DDatadir=\"../tests/\" -I../tests -I.. -I/usr/include -Wno-unused-result -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 ../libapophenia.la -L/usr/lib -lgsl -lgslcblas -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -o db_tests db_tests.o libtool: link: gcc 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-Wl,-z -Wl,relro -o ../eg/.libs/stack_models stack_models.o ../.libs/libapophenia.so -L/usr/lib -lgsl -lgslcblas -lm -fopenmp -pthread gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../tests/\" -I../tests -I.. -I/usr/include -Wno-unused-result -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o test_distances.o `test -f '../eg/test_distances.c' || echo './'`../eg/test_distances.c /bin/bash ../libtool --tag=CC --mode=link gcc -std=gnu99 -DTesting -DDatadir=\"../tests/\" -I../tests -I.. -I/usr/include -Wno-unused-result -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 ../libapophenia.la -L/usr/lib -lgsl -lgslcblas -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -o ../eg/test_distances test_distances.o libtool: link: gcc -std=gnu99 -DTesting -DDatadir=\"../tests/\" -I../tests -I.. -I/usr/include -Wno-unused-result -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-Bsymbolic-functions -Wl,-z 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****************************************************************************** Build finished at 20150408-2253 FAILED [dpkg-buildpackage died] ****************************************************************************** Finished at 20150408-2253 Build needed 02:33:34, 31288k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-7130253'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-7130253/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-7130253'] Unmounting chroot for build PACKAGEBUILD-7130253... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-7130253'] Removing build PACKAGEBUILD-7130253