RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux lcy01-27 4.4.0-53-generic #74-Ubuntu SMP Fri Dec 2 15:59:10 UTC 2016 x86_64 Buildd toolchain package versions: launchpad-buildd_141 python-lpbuildd_141 sbuild_0.67.0-2ubuntu7 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1 dpkg-dev_1.18.4ubuntu1.1 python-debian_0.1.27ubuntu2 qemu-user-static_1:2.5+dfsg-5ubuntu10.6. Syncing the system clock with the buildd NTP service... 13 Dec 04:19:54 ntpdate[1897]: adjust time server 10.211.37.1 offset 0.013113 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-11414475', '/home/buildd/filecache-default/94f0b0f826e99ad354ce9a7a99ba3c310ddcc327'] Unpacking chroot for build PACKAGEBUILD-11414475 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-11414475'] Mounting chroot for build PACKAGEBUILD-11414475 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-11414475', 'deb http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty main', 'deb http://ftpmaster.internal/ubuntu zesty main universe'] Overriding sources.list in build-PACKAGEBUILD-11414475 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-11414475', 'amd64'] Updating debian chroot for build PACKAGEBUILD-11414475 Get:1 http://ftpmaster.internal/ubuntu zesty InRelease [253 kB] Get:2 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty InRelease [17.5 kB] Ign:2 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty InRelease Get:3 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 Packages [35.7 kB] Get:4 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main Translation-en [12.1 kB] Get:5 http://ftpmaster.internal/ubuntu zesty/main amd64 Packages [1231 kB] Get:6 http://ftpmaster.internal/ubuntu zesty/main Translation-en [584 kB] Get:7 http://ftpmaster.internal/ubuntu zesty/universe amd64 Packages [7961 kB] Get:8 http://ftpmaster.internal/ubuntu zesty/universe Translation-en [4616 kB] Fetched 14.7 MB in 5s (2701 kB/s) Reading package lists... W: GPG error: http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty InRelease: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 1E9377A2BA9EF27F W: The repository 'http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty InRelease' is not signed. Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: g++-6 libperl5.22 libstdc++-6-dev perl-modules-5.22 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: cpp-7 g++-7 gcc-7 gcc-7-base libasan4 libgcc-7-dev libperl5.24 libstdc++-7-dev perl-modules-5.24 The following packages will be upgraded: adduser base-files base-passwd bash binutils bsdutils cpp cpp-6 debianutils diffutils dmsetup findutils g++ g++-6 gcc gcc-6 gcc-6-base grep init init-system-helpers libapparmor1 libasan3 libasn1-8-heimdal libassuan0 libatomic1 libblkid1 libcc1-0 libcilkrts5 libcurl3-gnutls libdevmapper1.02.1 libfdisk1 libgcc-6-dev libgcc1 libgcrypt20 libgnutls30 libgomp1 libgpg-error0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libitm1 libk5crypto3 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libksba8 libldap-2.4-2 liblsan0 liblzma5 libmount1 libmpx2 libnettle6 libnpth0 libpng16-16 libquadmath0 libroken18-heimdal libsasl2-2 libsasl2-modules-db libselinux1 libsemanage-common libsemanage1 libsepol1 libslang2 libsmartcols1 libsqlite3-0 libssl1.0.0 libstdc++-6-dev libstdc++6 libsystemd0 libtsan0 libubsan0 libudev1 libustr-1.0-1 libuuid1 libwind0-heimdal linux-libc-dev mount openssl perl perl-base pinentry-curses pkg-create-dbgsym systemd systemd-sysv tar tzdata ubuntu-keyring util-linux xz-utils 93 upgraded, 9 newly installed, 0 to remove and 0 not upgraded. Need to get 158 MB of archives. After this operation, 558 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! gcc-7-base libgcc1 libstdc++6 libquadmath0 libitm1 libgomp1 libatomic1 liblsan0 libtsan0 libubsan0 libcilkrts5 libmpx2 libcc1-0 cpp-7 cpp libasan4 libgcc-7-dev gcc-7 gcc libstdc++-7-dev g++-7 g++ Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu zesty/main amd64 base-files amd64 9.6ubuntu8 [56.9 kB] Get:2 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 gcc-7-base amd64 7-20161212-0ubuntu2 [14.2 kB] Get:3 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libgcc1 amd64 1:7-20161212-0ubuntu2 [39.4 kB] Get:4 http://ftpmaster.internal/ubuntu zesty/main amd64 debianutils amd64 4.8.1 [85.7 kB] Get:5 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libstdc++6 amd64 7-20161212-0ubuntu2 [402 kB] Get:6 http://ftpmaster.internal/ubuntu zesty/main amd64 bash amd64 4.4-2ubuntu1 [624 kB] Get:7 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libquadmath0 amd64 7-20161212-0ubuntu2 [133 kB] Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libitm1 amd64 7-20161212-0ubuntu2 [27.5 kB] Get:9 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libgomp1 amd64 7-20161212-0ubuntu2 [74.3 kB] Get:10 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libatomic1 amd64 7-20161212-0ubuntu2 [8790 B] Get:11 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 liblsan0 amd64 7-20161212-0ubuntu2 [126 kB] Get:12 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libtsan0 amd64 7-20161212-0ubuntu2 [275 kB] Get:13 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libubsan0 amd64 7-20161212-0ubuntu2 [118 kB] Get:14 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libcilkrts5 amd64 7-20161212-0ubuntu2 [42.5 kB] Get:15 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libmpx2 amd64 7-20161212-0ubuntu2 [11.5 kB] Get:16 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libcc1-0 amd64 7-20161212-0ubuntu2 [31.1 kB] Get:17 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 cpp-7 amd64 7-20161212-0ubuntu2 [33.8 MB] Get:18 http://ftpmaster.internal/ubuntu zesty/main amd64 bsdutils amd64 1:2.29-1ubuntu2 [55.3 kB] Get:19 http://ftpmaster.internal/ubuntu zesty/main amd64 diffutils amd64 1:3.5-1 [166 kB] Get:20 http://ftpmaster.internal/ubuntu zesty/main amd64 findutils amd64 4.6.0+git+20161106-1 [282 kB] Get:21 http://ftpmaster.internal/ubuntu zesty/main amd64 grep amd64 2.27-1 [154 kB] Get:22 http://ftpmaster.internal/ubuntu zesty/main amd64 libuuid1 amd64 2.29-1ubuntu2 [14.7 kB] Get:23 http://ftpmaster.internal/ubuntu zesty/main amd64 libblkid1 amd64 2.29-1ubuntu2 [110 kB] Get:24 http://ftpmaster.internal/ubuntu zesty/main amd64 libfdisk1 amd64 2.29-1ubuntu2 [144 kB] Get:25 http://ftpmaster.internal/ubuntu zesty/main amd64 libselinux1 amd64 2.6-3 [67.8 kB] Get:26 http://ftpmaster.internal/ubuntu zesty/main amd64 util-linux amd64 2.29-1ubuntu2 [911 kB] Get:27 http://ftpmaster.internal/ubuntu zesty/main amd64 mount amd64 2.29-1ubuntu2 [129 kB] Get:28 http://ftpmaster.internal/ubuntu zesty/main amd64 perl-modules-5.24 all 5.24.1~rc4-1 [2663 kB] Get:29 http://ftpmaster.internal/ubuntu zesty/main amd64 libperl5.24 amd64 5.24.1~rc4-1 [3471 kB] Get:30 http://ftpmaster.internal/ubuntu zesty/main amd64 perl amd64 5.24.1~rc4-1 [219 kB] Get:31 http://ftpmaster.internal/ubuntu zesty/main amd64 perl-base amd64 5.24.1~rc4-1 [1341 kB] Get:32 http://ftpmaster.internal/ubuntu zesty/main amd64 tar amd64 1.29b-1.1 [232 kB] Get:33 http://ftpmaster.internal/ubuntu zesty/main amd64 base-passwd amd64 3.5.42 [48.4 kB] Get:34 http://ftpmaster.internal/ubuntu zesty/main amd64 init-system-helpers all 1.46 [37.3 kB] Get:35 http://ftpmaster.internal/ubuntu zesty/main amd64 libapparmor1 amd64 2.10.95-4ubuntu5.2 [30.2 kB] Get:36 http://ftpmaster.internal/ubuntu zesty/main amd64 libgpg-error0 amd64 1.25-2 [34.3 kB] Get:37 http://ftpmaster.internal/ubuntu zesty/main amd64 libgcrypt20 amd64 1.7.3-2 [398 kB] Get:38 http://ftpmaster.internal/ubuntu zesty/main amd64 liblzma5 amd64 5.2.2-1.2 [91.0 kB] Get:39 http://ftpmaster.internal/ubuntu zesty/main amd64 libmount1 amd64 2.29-1ubuntu2 [119 kB] Get:40 http://ftpmaster.internal/ubuntu zesty/main amd64 adduser all 3.113+nmu3ubuntu5 [161 kB] Get:41 http://ftpmaster.internal/ubuntu zesty/main amd64 systemd amd64 232-7 [2357 kB] Get:42 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 cpp amd64 4:7-20161116-1ubuntu2 [27.4 kB] Get:43 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libasan4 amd64 7-20161212-0ubuntu2 [354 kB] Get:44 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libgcc-7-dev amd64 7-20161212-0ubuntu2 [2358 kB] Get:45 http://ftpmaster.internal/ubuntu zesty/main amd64 libsystemd0 amd64 232-7 [211 kB] Get:46 http://ftpmaster.internal/ubuntu zesty/main amd64 init amd64 1.46 [5320 B] Get:47 http://ftpmaster.internal/ubuntu zesty/main amd64 systemd-sysv amd64 232-7 [13.9 kB] Get:48 http://ftpmaster.internal/ubuntu zesty/main amd64 libsepol1 amd64 2.6-2 [220 kB] Get:49 http://ftpmaster.internal/ubuntu zesty/main amd64 libustr-1.0-1 amd64 1.0.4-6 [66.1 kB] Get:50 http://ftpmaster.internal/ubuntu zesty/main amd64 libsemanage-common all 2.6-1 [6832 B] Get:51 http://ftpmaster.internal/ubuntu zesty/main amd64 libsemanage1 amd64 2.6-1 [82.6 kB] Get:52 http://ftpmaster.internal/ubuntu zesty/main amd64 libsmartcols1 amd64 2.29-1ubuntu2 [69.4 kB] Get:53 http://ftpmaster.internal/ubuntu zesty/main amd64 libudev1 amd64 232-7 [57.3 kB] Get:54 http://ftpmaster.internal/ubuntu zesty/main amd64 ubuntu-keyring all 2016.10.27 [16.6 kB] Get:55 http://ftpmaster.internal/ubuntu zesty/main amd64 libasan3 amd64 6.2.1-5ubuntu1 [315 kB] Get:56 http://ftpmaster.internal/ubuntu zesty/main amd64 g++-6 amd64 6.2.1-5ubuntu1 [7384 kB] Get:57 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 gcc-7 amd64 7-20161212-0ubuntu2 [33.5 MB] Get:58 http://ftpmaster.internal/ubuntu zesty/main amd64 libstdc++-6-dev amd64 6.2.1-5ubuntu1 [1419 kB] Get:59 http://ftpmaster.internal/ubuntu zesty/main amd64 gcc-6 amd64 6.2.1-5ubuntu1 [7157 kB] Get:60 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 gcc amd64 4:7-20161116-1ubuntu2 [5176 B] Get:61 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libstdc++-7-dev amd64 7-20161212-0ubuntu2 [1480 kB] Get:62 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 g++-7 amd64 7-20161212-0ubuntu2 [36.4 MB] Get:63 http://ftpmaster.internal/ubuntu zesty/main amd64 libgcc-6-dev amd64 6.2.1-5ubuntu1 [2308 kB] Get:64 http://ftpmaster.internal/ubuntu zesty/main amd64 binutils amd64 2.27.51.20161201-1ubuntu1 [2423 kB] Get:65 http://ftpmaster.internal/ubuntu zesty/main amd64 cpp-6 amd64 6.2.1-5ubuntu1 [6607 kB] Get:66 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 g++ amd64 4:7-20161116-1ubuntu2 [1480 B] Get:67 http://ftpmaster.internal/ubuntu zesty/main amd64 gcc-6-base amd64 6.2.1-5ubuntu1 [16.8 kB] Get:68 http://ftpmaster.internal/ubuntu zesty/main amd64 tzdata all 2016j-2 [204 kB] Get:69 http://ftpmaster.internal/ubuntu zesty/main amd64 libdevmapper1.02.1 amd64 2:1.02.136-1ubuntu1 [135 kB] Get:70 http://ftpmaster.internal/ubuntu zesty/main amd64 dmsetup amd64 2:1.02.136-1ubuntu1 [71.7 kB] Get:71 http://ftpmaster.internal/ubuntu zesty/main amd64 libroken18-heimdal amd64 1.7~git20160703+dfsg-1ubuntu1 [40.9 kB] Get:72 http://ftpmaster.internal/ubuntu zesty/main amd64 libasn1-8-heimdal amd64 1.7~git20160703+dfsg-1ubuntu1 [176 kB] Get:73 http://ftpmaster.internal/ubuntu zesty/main amd64 libassuan0 amd64 2.4.3-2 [34.5 kB] Get:74 http://ftpmaster.internal/ubuntu zesty/main amd64 libhogweed4 amd64 3.3-1 [135 kB] Get:75 http://ftpmaster.internal/ubuntu zesty/main amd64 libnettle6 amd64 3.3-1 [92.4 kB] Get:76 http://ftpmaster.internal/ubuntu zesty/main amd64 libgnutls30 amd64 3.5.6-4ubuntu2 [626 kB] Get:77 http://ftpmaster.internal/ubuntu zesty/main amd64 libheimbase1-heimdal amd64 1.7~git20160703+dfsg-1ubuntu1 [29.2 kB] Get:78 http://ftpmaster.internal/ubuntu zesty/main amd64 libhcrypto4-heimdal amd64 1.7~git20160703+dfsg-1ubuntu1 [87.2 kB] Get:79 http://ftpmaster.internal/ubuntu zesty/main amd64 libwind0-heimdal amd64 1.7~git20160703+dfsg-1ubuntu1 [48.0 kB] Get:80 http://ftpmaster.internal/ubuntu zesty/main amd64 libhx509-5-heimdal amd64 1.7~git20160703+dfsg-1ubuntu1 [107 kB] Get:81 http://ftpmaster.internal/ubuntu zesty/main amd64 libsqlite3-0 amd64 3.15.1-1 [485 kB] Get:82 http://ftpmaster.internal/ubuntu zesty/main amd64 libkrb5-26-heimdal amd64 1.7~git20160703+dfsg-1ubuntu1 [202 kB] Get:83 http://ftpmaster.internal/ubuntu zesty/main amd64 libheimntlm0-heimdal amd64 1.7~git20160703+dfsg-1ubuntu1 [15.2 kB] Get:84 http://ftpmaster.internal/ubuntu zesty/main amd64 libgssapi3-heimdal amd64 1.7~git20160703+dfsg-1ubuntu1 [96.8 kB] Get:85 http://ftpmaster.internal/ubuntu zesty/main amd64 libksba8 amd64 1.3.5-2 [92.6 kB] Get:86 http://ftpmaster.internal/ubuntu zesty/main amd64 libsasl2-modules-db amd64 2.1.27~72-g88d82a3+dfsg-1 [15.1 kB] Get:87 http://ftpmaster.internal/ubuntu zesty/main amd64 libsasl2-2 amd64 2.1.27~72-g88d82a3+dfsg-1 [48.8 kB] Get:88 http://ftpmaster.internal/ubuntu zesty/main amd64 libldap-2.4-2 amd64 2.4.42+dfsg-2ubuntu5 [161 kB] Get:89 http://ftpmaster.internal/ubuntu zesty/main amd64 libnpth0 amd64 1.3-1 [8054 B] Get:90 http://ftpmaster.internal/ubuntu zesty/main amd64 libslang2 amd64 2.3.1-5ubuntu1 [422 kB] Get:91 http://ftpmaster.internal/ubuntu zesty/main amd64 libssl1.0.0 amd64 1.0.2g-1ubuntu10 [1082 kB] Get:92 http://ftpmaster.internal/ubuntu zesty/main amd64 pinentry-curses amd64 1.0.0-1 [32.6 kB] Get:93 http://ftpmaster.internal/ubuntu zesty/main amd64 xz-utils amd64 5.2.2-1.2 [83.2 kB] Get:94 http://ftpmaster.internal/ubuntu zesty/main amd64 libgssapi-krb5-2 amd64 1.15~beta1-1 [120 kB] Get:95 http://ftpmaster.internal/ubuntu zesty/main amd64 libkrb5-3 amd64 1.15~beta1-1 [274 kB] Get:96 http://ftpmaster.internal/ubuntu zesty/main amd64 libkrb5support0 amd64 1.15~beta1-1 [31.8 kB] Get:97 http://ftpmaster.internal/ubuntu zesty/main amd64 libk5crypto3 amd64 1.15~beta1-1 [83.9 kB] Get:98 http://ftpmaster.internal/ubuntu zesty/main amd64 libcurl3-gnutls amd64 7.51.0-1ubuntu1 [188 kB] Get:99 http://ftpmaster.internal/ubuntu zesty/main amd64 libpng16-16 amd64 1.6.26-2ubuntu1 [173 kB] Get:100 http://ftpmaster.internal/ubuntu zesty/main amd64 openssl amd64 1.0.2g-1ubuntu10 [491 kB] Get:101 http://ftpmaster.internal/ubuntu zesty/main amd64 linux-libc-dev amd64 4.8.0-30.32 [867 kB] Get:102 http://ftpmaster.internal/ubuntu zesty/main amd64 pkg-create-dbgsym all 0.73 [8952 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 158 MB in 7s (21.5 MB/s) (Reading database ... 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Current default time zone: 'Etc/UTC' Local time is now: Tue Dec 13 04:20:53 UTC 2016. Universal Time is now: Tue Dec 13 04:20:53 UTC 2016. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up systemd-sysv (232-7) ... Setting up libubsan0:amd64 (7-20161212-0ubuntu2) ... Setting up libtsan0:amd64 (7-20161212-0ubuntu2) ... Setting up gcc-6-base:amd64 (6.2.1-5ubuntu1) ... Setting up libsasl2-modules-db:amd64 (2.1.27~72-g88d82a3+dfsg-1) ... Setting up linux-libc-dev:amd64 (4.8.0-30.32) ... Setting up libsasl2-2:amd64 (2.1.27~72-g88d82a3+dfsg-1) ... Setting up libroken18-heimdal:amd64 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up libksba8:amd64 (1.3.5-2) ... Setting up libdevmapper1.02.1:amd64 (2:1.02.136-1ubuntu1) ... Setting up libkrb5support0:amd64 (1.15~beta1-1) ... Setting up cpp-7 (7-20161212-0ubuntu2) ... Setting up libhogweed4:amd64 (3.3-1) ... Setting up liblsan0:amd64 (7-20161212-0ubuntu2) ... Setting up perl (5.24.1~rc4-1) ... Installing new version of config file /etc/perl/sitecustomize.pl ... Setting up libmpx2:amd64 (7-20161212-0ubuntu2) ... Processing triggers for libc-bin (2.24-3ubuntu1) ... Setting up pkg-create-dbgsym (0.73) ... Setting up xz-utils (5.2.2-1.2) ... Setting up libheimbase1-heimdal:amd64 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up openssl (1.0.2g-1ubuntu10) ... Setting up libsqlite3-0:amd64 (3.15.1-1) ... Setting up dmsetup (2:1.02.136-1ubuntu1) ... Setting up binutils (2.27.51.20161201-1ubuntu1) ... Setting up cpp-6 (6.2.1-5ubuntu1) ... Setting up libslang2:amd64 (2.3.1-5ubuntu1) ... Setting up libassuan0:amd64 (2.4.3-2) ... Setting up libitm1:amd64 (7-20161212-0ubuntu2) ... Setting up cpp (4:7-20161116-1ubuntu2) ... Setting up libk5crypto3:amd64 (1.15~beta1-1) ... Setting up libasan3:amd64 (6.2.1-5ubuntu1) ... Setting up libgcc-6-dev:amd64 (6.2.1-5ubuntu1) ... Setting up libstdc++-6-dev:amd64 (6.2.1-5ubuntu1) ... Setting up libwind0-heimdal:amd64 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up init (1.46) ... Setting up libasn1-8-heimdal:amd64 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up libhcrypto4-heimdal:amd64 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up libgnutls30:amd64 (3.5.6-4ubuntu2) ... Setting up libhx509-5-heimdal:amd64 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up libgcc-7-dev:amd64 (7-20161212-0ubuntu2) ... Setting up gcc-6 (6.2.1-5ubuntu1) ... Setting up g++-6 (6.2.1-5ubuntu1) ... Setting up libstdc++-7-dev:amd64 (7-20161212-0ubuntu2) ... Setting up pinentry-curses (1.0.0-1) ... Setting up libkrb5-3:amd64 (1.15~beta1-1) ... Setting up libkrb5-26-heimdal:amd64 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up libheimntlm0-heimdal:amd64 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up gcc-7 (7-20161212-0ubuntu2) ... Setting up g++-7 (7-20161212-0ubuntu2) ... Setting up gcc (4:7-20161116-1ubuntu2) ... Setting up libgssapi-krb5-2:amd64 (1.15~beta1-1) ... Setting up g++ (4:7-20161116-1ubuntu2) ... Setting up libgssapi3-heimdal:amd64 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up libldap-2.4-2:amd64 (2.4.42+dfsg-2ubuntu5) ... Setting up libcurl3-gnutls:amd64 (7.51.0-1ubuntu1) ... Processing triggers for libc-bin (2.24-3ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-11414475', 'amd64', 'zesty', '-c', 'chroot:autobuild', '--arch=amd64', '--dist=zesty', '--purge=never', '--nolog', '-A', 'freecontact_1.0.21-4build3.dsc'] Initiating build PACKAGEBUILD-11414475 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-53-generic #74-Ubuntu SMP Fri Dec 2 15:59:10 UTC 2016 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lcy01-27.buildd +==============================================================================+ | freecontact 1.0.21-4build3 (amd64) 13 Dec 2016 04:20 | +==============================================================================+ Package: freecontact Version: 1.0.21-4build3 Source Version: 1.0.21-4build3 Distribution: zesty Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/freecontact-eyaG2l/freecontact-1.0.21' with '<>' I: NOTICE: Log filtering will replace 'build/freecontact-eyaG2l' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-11414475/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- freecontact_1.0.21-4build3.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-at6hgY/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-at6hgY/apt_archive ./ InRelease Get:2 copy:/<>/resolver-at6hgY/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-at6hgY/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-at6hgY/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-at6hgY/apt_archive ./ Packages [525 B] Fetched 2858 B in 0s (217 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-6 libperl5.22 libstdc++-6-dev perl-modules-5.22 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 772 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-at6hgY/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [772 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 772 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 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Merged Build-Depends: debhelper (>= 9.0.0), automake, autotools-dev, bash-completion, dh-autoreconf, d-shlibs, dpkg-dev (>= 1.16.2), gfortran, libblas-dev | libblas-3.so, libboost-dev, libboost-program-options-dev, liblapack-dev | liblapack-3.so, libtool, libxerces-c-dev, perl, xsdcxx (>= 3.3), doxygen Filtered Build-Depends: debhelper (>= 9.0.0), automake, autotools-dev, bash-completion, dh-autoreconf, d-shlibs, dpkg-dev (>= 1.16.2), gfortran, libblas-dev | libblas-3.so, libboost-dev, libboost-program-options-dev, liblapack-dev | liblapack-3.so, libtool, libxerces-c-dev, perl, xsdcxx (>= 3.3), doxygen dpkg-deb: building package 'sbuild-build-depends-freecontact-dummy' in '/<>/resolver-K48oAR/apt_archive/sbuild-build-depends-freecontact-dummy.deb'. Ign:1 copy:/<>/resolver-K48oAR/apt_archive ./ InRelease Get:2 copy:/<>/resolver-K48oAR/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-K48oAR/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-K48oAR/apt_archive ./ Sources [352 B] Get:5 copy:/<>/resolver-K48oAR/apt_archive ./ Packages [660 B] Fetched 3131 B in 0s (192 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install freecontact build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-6 libperl5.22 perl-modules-5.22 Use 'sudo apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bash-completion bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen file gettext gettext-base gfortran gfortran-7 groff-base icu-devtools intltool-debian libarchive-zip-perl libblas-common libblas-dev libblas3 libboost-dev libboost-program-options-dev libboost-program-options1.62-dev libboost-program-options1.62.0 libboost1.62-dev libbsd0 libclang1-3.9 libcroco3 libedit2 libfile-stripnondeterminism-perl libgfortran-7-dev libgfortran3 libgfortran4 libglib2.0-0 libicu-dev libicu57 liblapack-dev liblapack3 libllvm3.9 libmagic1 libpipeline1 libsigsegv2 libtimedate-perl libtool libunistring0 libxerces-c-dev libxerces-c3.1 libxml2 m4 man-db po-debconf xsdcxx Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make doxygen-latex doxygen-doc doxygen-gui graphviz gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-7-multilib gfortran-7-doc libgfortran4-dbg libcoarrays-dev groff liblapack-doc-man liblapack-doc libboost-doc libboost1.62-doc libboost-atomic1.62-dev libboost-chrono1.62-dev libboost-context1.62-dev libboost-coroutine1.62-dev libboost-date-time1.62-dev libboost-exception1.62-dev libboost-fiber1.62-dev libboost-filesystem1.62-dev libboost-graph1.62-dev libboost-graph-parallel1.62-dev libboost-iostreams1.62-dev libboost-locale1.62-dev libboost-log1.62-dev libboost-math1.62-dev libboost-mpi1.62-dev libboost-mpi-python1.62-dev libboost-python1.62-dev libboost-random1.62-dev libboost-regex1.62-dev libboost-serialization1.62-dev libboost-signals1.62-dev libboost-system1.62-dev libboost-test1.62-dev libboost-thread1.62-dev libboost-timer1.62-dev libboost-type-erasure1.62-dev libboost-wave1.62-dev libboost1.62-tools-dev libmpfrc++-dev libntl-dev icu-doc libtool-doc gcj-jdk libxerces-c-doc less www-browser libmail-box-perl Recommended packages: curl | wget | lynx-cur libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev xml-core libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bash-completion bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen file gettext gettext-base gfortran gfortran-7 groff-base icu-devtools intltool-debian libarchive-zip-perl libblas-common libblas-dev libblas3 libboost-dev libboost-program-options-dev libboost-program-options1.62-dev libboost-program-options1.62.0 libboost1.62-dev libbsd0 libclang1-3.9 libcroco3 libedit2 libfile-stripnondeterminism-perl libgfortran-7-dev libgfortran3 libgfortran4 libglib2.0-0 libicu-dev libicu57 liblapack-dev liblapack3 libllvm3.9 libmagic1 libpipeline1 libsigsegv2 libtimedate-perl libtool libunistring0 libxerces-c-dev libxerces-c3.1 libxml2 m4 man-db po-debconf sbuild-build-depends-freecontact-dummy xsdcxx 0 upgraded, 56 newly installed, 0 to remove and 0 not upgraded. Need to get 106 MB of archives. After this operation, 577 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libgfortran4 libgfortran-7-dev gfortran-7 gfortran Authentication warning overridden. Get:1 copy:/<>/resolver-K48oAR/apt_archive ./ sbuild-build-depends-freecontact-dummy 0.invalid.0 [910 B] Get:2 http://ftpmaster.internal/ubuntu zesty/main amd64 bash-completion all 1:2.1-4.3ubuntu1 [150 kB] Get:3 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libgfortran4 amd64 7-20161212-0ubuntu2 [469 kB] Get:4 http://ftpmaster.internal/ubuntu zesty/main amd64 groff-base amd64 1.22.3-8 [1142 kB] Get:5 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 libgfortran-7-dev amd64 7-20161212-0ubuntu2 [507 kB] Get:6 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu zesty/main amd64 gfortran-7 amd64 7-20161212-0ubuntu2 [34.7 MB] Get:7 http://ftpmaster.internal/ubuntu zesty/main amd64 libbsd0 amd64 0.8.3-1 [41.4 kB] Get:8 http://ftpmaster.internal/ubuntu zesty/main amd64 bsdmainutils amd64 9.0.12ubuntu1 [177 kB] Get:9 http://ftpmaster.internal/ubuntu zesty/main amd64 libpipeline1 amd64 1.4.1-2 [24.6 kB] Get:10 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libfile-stripnondeterminism-perl all 0.028-1 [12.5 kB] Get:31 http://ftpmaster.internal/ubuntu zesty/main amd64 libtimedate-perl all 2.3000-2 [37.5 kB] Get:32 http://ftpmaster.internal/ubuntu zesty/main amd64 dh-strip-nondeterminism all 0.028-1 [4820 B] Get:33 http://ftpmaster.internal/ubuntu zesty/main amd64 libcroco3 amd64 0.6.11-2 [81.1 kB] Get:34 http://ftpmaster.internal/ubuntu zesty/main amd64 gettext amd64 0.19.8.1-1ubuntu2 [1083 kB] Get:35 http://ftpmaster.internal/ubuntu zesty/main amd64 intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:36 http://ftpmaster.internal/ubuntu zesty/main amd64 po-debconf all 1.0.20 [232 kB] Get:37 http://ftpmaster.internal/ubuntu zesty/main amd64 debhelper all 10.2.2ubuntu1 [742 kB] Get:38 http://ftpmaster.internal/ubuntu zesty/main amd64 libllvm3.9 amd64 1:3.9-6ubuntu1 [11.2 MB] Get:39 http://ftpmaster.internal/ubuntu zesty/main amd64 libclang1-3.9 amd64 1:3.9-6ubuntu1 [5932 kB] Get:40 http://ftpmaster.internal/ubuntu zesty/main amd64 doxygen amd64 1.8.12-1ubuntu1 [3862 kB] Get:41 http://ftpmaster.internal/ubuntu zesty/main amd64 icu-devtools amd64 57.1-4 [169 kB] Get:42 http://ftpmaster.internal/ubuntu zesty/main amd64 libblas-common amd64 3.6.1-2ubuntu1 [5678 B] Get:43 http://ftpmaster.internal/ubuntu zesty/main amd64 libblas3 amd64 3.6.1-2ubuntu1 [144 kB] Get:44 http://ftpmaster.internal/ubuntu zesty/main amd64 libblas-dev amd64 3.6.1-2ubuntu1 [7702 B] Get:45 http://ftpmaster.internal/ubuntu zesty/main amd64 libboost1.62-dev amd64 1.62.0+dfsg-4 [6986 kB] Get:46 http://ftpmaster.internal/ubuntu zesty/main amd64 libboost-dev amd64 1.62.0.1 [3074 B] Get:47 http://ftpmaster.internal/ubuntu zesty/main amd64 libboost-program-options1.62.0 amd64 1.62.0+dfsg-4 [136 kB] Get:48 http://ftpmaster.internal/ubuntu zesty/main amd64 libboost-program-options1.62-dev amd64 1.62.0+dfsg-4 [159 kB] Get:49 http://ftpmaster.internal/ubuntu zesty/main amd64 libboost-program-options-dev amd64 1.62.0.1 [2886 B] Get:50 http://ftpmaster.internal/ubuntu zesty/main amd64 libgfortran3 amd64 6.2.1-5ubuntu1 [270 kB] Get:51 http://ftpmaster.internal/ubuntu zesty/main amd64 libicu-dev amd64 57.1-4 [16.4 MB] Get:52 http://ftpmaster.internal/ubuntu zesty/main amd64 liblapack3 amd64 3.6.1-2ubuntu1 [1950 kB] Get:53 http://ftpmaster.internal/ubuntu zesty/main amd64 liblapack-dev amd64 3.6.1-2ubuntu1 [1979 kB] Get:54 http://ftpmaster.internal/ubuntu zesty/universe amd64 libxerces-c3.1 amd64 3.1.4+debian-1 [838 kB] Get:55 http://ftpmaster.internal/ubuntu zesty/universe amd64 libxerces-c-dev amd64 3.1.4+debian-1 [1627 kB] Get:56 http://ftpmaster.internal/ubuntu zesty/universe amd64 xsdcxx amd64 4.0.0-6 [1866 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 106 MB in 8s (12.6 MB/s) Selecting previously unselected package bash-completion. 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Setting up gettext-base (0.19.8.1-1ubuntu2) ... Setting up libpipeline1:amd64 (1.4.1-2) ... Setting up m4 (1.4.17-5) ... Setting up libicu57:amd64 (57.1-4) ... Setting up libbsd0:amd64 (0.8.3-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-2) ... Setting up libmagic1:amd64 (1:5.28-2ubuntu1) ... Setting up libcroco3:amd64 (0.6.11-2) ... Setting up libblas3 (3.6.1-2ubuntu1) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Processing triggers for libc-bin (2.24-3ubuntu1) ... Setting up autotools-dev (20161112.1) ... Setting up libunistring0:amd64 (0.9.3-5.2ubuntu1) ... Setting up libgfortran-7-dev:amd64 (7-20161212-0ubuntu2) ... Setting up gfortran-7 (7-20161212-0ubuntu2) ... Setting up icu-devtools (57.1-4) ... Setting up libboost-dev:amd64 (1.62.0.1) ... Setting up bsdmainutils (9.0.12ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autopoint (0.19.8.1-1ubuntu2) ... Setting up libboost-program-options-dev:amd64 (1.62.0.1) ... Setting up libfile-stripnondeterminism-perl (0.028-1) ... Setting up libedit2:amd64 (3.1-20150325-1ubuntu2) ... Setting up gfortran (4:7-20161116-1ubuntu2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libxerces-c3.1:amd64 (3.1.4+debian-1) ... Setting up gettext (0.19.8.1-1ubuntu2) ... Setting up libblas-dev (3.6.1-2ubuntu1) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode Setting up liblapack3 (3.6.1-2ubuntu1) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libllvm3.9:amd64 (1:3.9-6ubuntu1) ... Setting up autoconf (2.69-10) ... Setting up libicu-dev (57.1-4) ... Setting up file (1:5.28-2ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libclang1-3.9:amd64 (1:3.9-6ubuntu1) ... Setting up automake (1:1.15-5ubuntu1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.7.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up xsdcxx (4.0.0-6) ... Setting up liblapack-dev (3.6.1-2ubuntu1) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode Setting up libtool (2.4.6-2) ... Setting up libxerces-c-dev (3.1.4+debian-1) ... Setting up po-debconf (1.0.20) ... Setting up doxygen (1.8.12-1ubuntu1) ... Setting up dh-autoreconf (12) ... Setting up dh-strip-nondeterminism (0.028-1) ... Setting up debhelper (10.2.2ubuntu1) ... Setting up sbuild-build-depends-freecontact-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.24-3ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-53-generic amd64 (x86_64) Toolchain package versions: binutils_2.27.51.20161201-1ubuntu1 dpkg-dev_1.18.10ubuntu1 g++-6_6.2.1-5ubuntu1 g++-7_7-20161212-0ubuntu2 gcc-6_6.2.1-5ubuntu1 gcc-7_7-20161212-0ubuntu2 libc6-dev_2.24-3ubuntu1 libstdc++-6-dev_6.2.1-5ubuntu1 libstdc++-7-dev_7-20161212-0ubuntu2 libstdc++6_7-20161212-0ubuntu2 linux-libc-dev_4.8.0-30.32 Package versions: adduser_3.113+nmu3ubuntu5 advancecomp_1.20-1 apt_1.3.1 apt-transport-https_1.3.1 autoconf_2.69-10 automake_1:1.15-5ubuntu1 autopoint_0.19.8.1-1ubuntu2 autotools-dev_20161112.1 base-files_9.6ubuntu8 base-passwd_3.5.42 bash_4.4-2ubuntu1 bash-completion_1:2.1-4.3ubuntu1 binutils_2.27.51.20161201-1ubuntu1 bsdmainutils_9.0.12ubuntu1 bsdutils_1:2.29-1ubuntu2 build-essential_12.1ubuntu2 bzip2_1.0.6-8build1 ca-certificates_20160104ubuntu1 coreutils_8.25-2ubuntu2 cpp_4:7-20161116-1ubuntu2 cpp-6_6.2.1-5ubuntu1 cpp-7_7-20161212-0ubuntu2 d-shlibs_0.77ubuntu1 dash_0.5.8-2.3ubuntu1 debconf_1.5.59ubuntu1 debhelper_10.2.2ubuntu1 debianutils_4.8.1 dh-autoreconf_12 dh-strip-nondeterminism_0.028-1 diffutils_1:3.5-1 dmsetup_2:1.02.136-1ubuntu1 doxygen_1.8.12-1ubuntu1 dpkg_1.18.10ubuntu1 dpkg-dev_1.18.10ubuntu1 e2fslibs_1.43.3-1 e2fsprogs_1.43.3-1 fakeroot_1.21-1ubuntu2 file_1:5.28-2ubuntu1 findutils_4.6.0+git+20161106-1 g++_4:7-20161116-1ubuntu2 g++-6_6.2.1-5ubuntu1 g++-7_7-20161212-0ubuntu2 gcc_4:7-20161116-1ubuntu2 gcc-6_6.2.1-5ubuntu1 gcc-6-base_6.2.1-5ubuntu1 gcc-7_7-20161212-0ubuntu2 gcc-7-base_7-20161212-0ubuntu2 gettext_0.19.8.1-1ubuntu2 gettext-base_0.19.8.1-1ubuntu2 gfortran_4:7-20161116-1ubuntu2 gfortran-7_7-20161212-0ubuntu2 gnupg_2.1.15-1ubuntu6 gnupg-agent_2.1.15-1ubuntu6 gpgv_2.1.15-1ubuntu6 grep_2.27-1 groff-base_1.22.3-8 gzip_1.6-4ubuntu1 hostname_3.18 icu-devtools_57.1-4 init_1.46 init-system-helpers_1.46 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3 libapparmor1_2.10.95-4ubuntu5.2 libapt-pkg5.0_1.3.1 libarchive-zip-perl_1.59-1 libasan3_6.2.1-5ubuntu1 libasan4_7-20161212-0ubuntu2 libasn1-8-heimdal_1.7~git20160703+dfsg-1ubuntu1 libassuan0_2.4.3-2 libatomic1_7-20161212-0ubuntu2 libattr1_1:2.4.47-2 libaudit-common_1:2.6.6-1ubuntu1 libaudit1_1:2.6.6-1ubuntu1 libblas-common_3.6.1-2ubuntu1 libblas-dev_3.6.1-2ubuntu1 libblas3_3.6.1-2ubuntu1 libblkid1_2.29-1ubuntu2 libboost-dev_1.62.0.1 libboost-program-options-dev_1.62.0.1 libboost-program-options1.62-dev_1.62.0+dfsg-4 libboost-program-options1.62.0_1.62.0+dfsg-4 libboost1.62-dev_1.62.0+dfsg-4 libbsd0_0.8.3-1 libbz2-1.0_1.0.6-8build1 libc-bin_2.24-3ubuntu1 libc-dev-bin_2.24-3ubuntu1 libc6_2.24-3ubuntu1 libc6-dev_2.24-3ubuntu1 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcc1-0_7-20161212-0ubuntu2 libcilkrts5_7-20161212-0ubuntu2 libclang1-3.9_1:3.9-6ubuntu1 libcomerr2_1.43.3-1 libcroco3_0.6.11-2 libcryptsetup4_2:1.7.2-0ubuntu1 libcurl3-gnutls_7.51.0-1ubuntu1 libdb5.3_5.3.28-12 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.136-1ubuntu1 libdpkg-perl_1.18.10ubuntu1 libedit2_3.1-20150325-1ubuntu2 libfakeroot_1.21-1ubuntu2 libfdisk1_2.29-1ubuntu2 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.028-1 libgcc-6-dev_6.2.1-5ubuntu1 libgcc-7-dev_7-20161212-0ubuntu2 libgcc1_1:7-20161212-0ubuntu2 libgcrypt20_1.7.3-2 libgdbm3_1.8.3-14 libgfortran-7-dev_7-20161212-0ubuntu2 libgfortran3_6.2.1-5ubuntu1 libgfortran4_7-20161212-0ubuntu2 libglib2.0-0_2.51.0-2 libgmp10_2:6.1.1+dfsg-1 libgnutls30_3.5.6-4ubuntu2 libgomp1_7-20161212-0ubuntu2 libgpg-error0_1.25-2 libgssapi-krb5-2_1.15~beta1-1 libgssapi3-heimdal_1.7~git20160703+dfsg-1ubuntu1 libhcrypto4-heimdal_1.7~git20160703+dfsg-1ubuntu1 libheimbase1-heimdal_1.7~git20160703+dfsg-1ubuntu1 libheimntlm0-heimdal_1.7~git20160703+dfsg-1ubuntu1 libhogweed4_3.3-1 libhx509-5-heimdal_1.7~git20160703+dfsg-1ubuntu1 libicu-dev_57.1-4 libicu57_57.1-4 libidn11_1.33-1 libip4tc0_1.6.0-3ubuntu2 libisl15_0.17.1-1 libitm1_7-20161212-0ubuntu2 libk5crypto3_1.15~beta1-1 libkeyutils1_1.5.9-9ubuntu1 libkmod2_22-1.1ubuntu1 libkrb5-26-heimdal_1.7~git20160703+dfsg-1ubuntu1 libkrb5-3_1.15~beta1-1 libkrb5support0_1.15~beta1-1 libksba8_1.3.5-2 liblapack-dev_3.6.1-2ubuntu1 liblapack3_3.6.1-2ubuntu1 libldap-2.4-2_2.4.42+dfsg-2ubuntu5 libllvm3.9_1:3.9-6ubuntu1 liblockfile-bin_1.09-6ubuntu1 liblockfile1_1.09-6ubuntu1 liblsan0_7-20161212-0ubuntu2 liblz4-1_0.0~r131-2ubuntu2 liblzma5_5.2.2-1.2 libmagic1_1:5.28-2ubuntu1 libmount1_2.29-1ubuntu2 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libmpx2_7-20161212-0ubuntu2 libncurses5_6.0+20160625-1ubuntu1 libncursesw5_6.0+20160625-1ubuntu1 libnettle6_3.3-1 libnpth0_1.3-1 libp11-kit0_0.23.2-5 libpam-modules_1.1.8-3.2ubuntu2 libpam-modules-bin_1.1.8-3.2ubuntu2 libpam-runtime_1.1.8-3.2ubuntu2 libpam0g_1.1.8-3.2ubuntu2 libpcre3_2:8.39-2 libperl5.22_5.22.2-3 libperl5.24_5.24.1~rc4-1 libpipeline1_1.4.1-2 libpng16-16_1.6.26-2ubuntu1 libprocps6_2:3.3.12-1ubuntu2 libquadmath0_7-20161212-0ubuntu2 libreadline7_7.0-0ubuntu2 libroken18-heimdal_1.7~git20160703+dfsg-1ubuntu1 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~72-g88d82a3+dfsg-1 libsasl2-modules-db_2.1.27~72-g88d82a3+dfsg-1 libseccomp2_2.3.1-2ubuntu2 libselinux1_2.6-3 libsemanage-common_2.6-1 libsemanage1_2.6-1 libsepol1_2.6-2 libsigsegv2_2.10-5 libslang2_2.3.1-5ubuntu1 libsmartcols1_2.29-1ubuntu2 libsqlite3-0_3.15.1-1 libss2_1.43.3-1 libssl1.0.0_1.0.2g-1ubuntu10 libstdc++-6-dev_6.2.1-5ubuntu1 libstdc++-7-dev_7-20161212-0ubuntu2 libstdc++6_7-20161212-0ubuntu2 libsystemd0_232-7 libtasn1-6_4.9-4 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160625-1ubuntu1 libtool_2.4.6-2 libtsan0_7-20161212-0ubuntu2 libubsan0_7-20161212-0ubuntu2 libudev1_232-7 libunistring0_0.9.3-5.2ubuntu1 libusb-0.1-4_2:0.1.12-30 libustr-1.0-1_1.0.4-6 libuuid1_2.29-1ubuntu2 libwind0-heimdal_1.7~git20160703+dfsg-1ubuntu1 libxerces-c-dev_3.1.4+debian-1 libxerces-c3.1_3.1.4+debian-1 libxml2_2.9.4+dfsg1-2 linux-libc-dev_4.8.0-30.32 lockfile-progs_0.1.17 login_1:4.2-3.2ubuntu1 lsb-base_9.20160110ubuntu5 m4_1.4.17-5 make_4.1-9 man-db_2.7.5-2 mawk_1.3.3-17ubuntu2 mount_2.29-1ubuntu2 multiarch-support_2.24-3ubuntu1 ncurses-base_6.0+20160625-1ubuntu1 ncurses-bin_6.0+20160625-1ubuntu1 openssl_1.0.2g-1ubuntu10 optipng_0.7.6-1build1 passwd_1:4.2-3.2ubuntu1 patch_2.7.5-1 perl_5.24.1~rc4-1 perl-base_5.24.1~rc4-1 perl-modules-5.22_5.22.2-3 perl-modules-5.24_5.24.1~rc4-1 pinentry-curses_1.0.0-1 pkg-create-dbgsym_0.73 pkgbinarymangler_131 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.12-1ubuntu2 readline-common_7.0-0ubuntu2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-freecontact-dummy_0.invalid.0 sed_4.2.2-8 sensible-utils_0.0.9 systemd_232-7 systemd-sysv_232-7 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.8git1 tar_1.29b-1.1 tzdata_2016j-2 ubuntu-keyring_2016.10.27 util-linux_2.29-1ubuntu2 xsdcxx_4.0.0-6 xz-utils_5.2.2-1.2 zlib1g_1:1.2.8.dfsg-2ubuntu5 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Nov 1 17:02:02 2016 UTC gpgv: using RSA key gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./freecontact_1.0.21-4build3.dsc dpkg-source: info: extracting freecontact in freecontact-1.0.21 dpkg-source: info: unpacking freecontact_1.0.21.orig.tar.xz dpkg-source: info: unpacking freecontact_1.0.21-4build3.debian.tar.xz Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/home/buildd LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd MAIL=/var/mail/buildd OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games PWD=/<> SHELL=/bin/sh SUDO_COMMAND=/usr/sbin/chroot /<> su buildd -s /bin/sh -c cd '/<>' && 'env' SUDO_GID=2501 SUDO_UID=2001 SUDO_USER=buildd TERM=unknown USER=buildd USERNAME=root dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package freecontact dpkg-buildpackage: info: source version 1.0.21-4build3 dpkg-buildpackage: info: source distribution zesty dpkg-source --before-build freecontact-1.0.21 dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from freecontact-1.0.21/debian/source/options: --single-debian-patch --extend-diff-ignore=(^|/)(config.guess|config.sub|INSTALL)$ fakeroot debian/rules clean dh clean --parallel --with bash-completion --with autoreconf dh_testdir -O--parallel debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -f build-indep-stamp dh_auto_clean make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--parallel dh_clean -O--parallel debian/rules build dh build --parallel --with bash-completion --with autoreconf dh_testdir -O--parallel dh_update_autotools_config -O--parallel dh_autoreconf -O--parallel libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:29: installing './compile' configure.ac:22: installing './missing' lib/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/<>' dh_auto_configure -- --with-boost-libdir=/usr/lib/x86_64-linux-gnu ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --with-boost-libdir=/usr/lib/x86_64-linux-gnu configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for style of include used by make... GNU checking dependency style of g++... none checking for g77... no checking for xlf... no checking for f77... f77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/x86_64-linux-gnu/7 -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/7/../../.. -lgfortran -lm -lquadmath checking how to print strings... printf checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... yes checking if f77 supports -c -o file.o... yes checking if f77 supports -c -o file.o... (cached) yes checking whether the f77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: -O3 enables: -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops checking for boostlib >= 1.20.0... yes checking whether the Boost::Program_Options library is available... yes checking for exit in -lboost_program_options... yes checking whether HAVE_BOOST_PROGRAM_OPTIONS is declared... yes checking for OpenMP flag of C++ compiler... -fopenmp checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/x86_64-linux-gnu/7 -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/7/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... no checking for ATL_xerbla in -latlas... no checking for sgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for sgemm_ in -lmkl_gf_lp64... no checking for sgemm_ in -lmkl... no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... no checking for sgemm_ in -ldxml... no checking for sgemm_ in -lscs... no checking for sgemm_ in -lcomplib.sgimath... no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for the pthreads library -lpthreads... no checking whether pthreads work without any flags... no checking whether pthreads work with -Kthread... no checking whether pthreads work with -kthread... no checking for the pthreads library -llthread... no checking whether pthreads work with -pthread... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking for Xerces C++ Parser headers in /usr/include and /usr/include/xercesc... found checking for Xerces C++ Parser libraries... found checking for Xerces C++ Parser... yes checking for xsdcxx... xsdcxx checking for x86 cpuid output... unknown checking for x86 cpuid 0x00000001 output... 206c1:2000800:82ba2223:f8bfbff checking whether mmx is supported... yes checking whether sse is supported... yes checking whether sse2 is supported... yes checking whether sse3 is supported... yes checking whether ssse3 is supported... yes checking whether sse4.1 is supported... yes checking whether sse4.2 is supported... yes checking whether avx is supported... no checking whether C++ compiler accepts -mmmx... yes checking whether C++ compiler accepts -msse... yes checking whether C++ compiler accepts -msse2... yes checking whether C++ compiler accepts -msse3... yes checking whether C++ compiler accepts -mssse3... yes checking whether C++ compiler accepts -msse4.1... yes checking whether C++ compiler accepts -msse4.2... yes checking for doxygen... /usr/bin/doxygen checking for perl... /usr/bin/perl checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Doxyfile config.status: creating lib/Makefile config.status: creating src/Makefile config.status: creating lib/config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode make[1]: Leaving directory '/<>' debian/rules override_dh_auto_configure-indep make[1]: Entering directory '/<>' dh_auto_configure -- --with-blas=blas --with-boost-libdir=/usr/lib/x86_64-linux-gnu && /usr/bin/make -C lib doxygen-doc && touch override_dh_auto_configure-indep ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --with-blas=blas --with-boost-libdir=/usr/lib/x86_64-linux-gnu configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for style of include used by make... GNU checking dependency style of g++... none checking for g77... no checking for xlf... no checking for f77... f77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/x86_64-linux-gnu/7 -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/7/../../.. -lgfortran -lm -lquadmath checking how to print strings... printf checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... yes checking if f77 supports -c -o file.o... yes checking if f77 supports -c -o file.o... (cached) yes checking whether the f77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: -O3 enables: -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops checking for boostlib >= 1.20.0... yes checking whether the Boost::Program_Options library is available... yes checking for exit in -lboost_program_options... yes checking whether HAVE_BOOST_PROGRAM_OPTIONS is declared... yes checking for OpenMP flag of C++ compiler... -fopenmp checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/x86_64-linux-gnu/7 -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/7/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking for sgemm_ in -lblas... yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for the pthreads library -lpthreads... no checking whether pthreads work without any flags... no checking whether pthreads work with -Kthread... no checking whether pthreads work with -kthread... no checking for the pthreads library -llthread... no checking whether pthreads work with -pthread... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking for Xerces C++ Parser headers in /usr/include and /usr/include/xercesc... found checking for Xerces C++ Parser libraries... found checking for Xerces C++ Parser... yes checking for xsdcxx... xsdcxx checking for x86 cpuid output... unknown checking for x86 cpuid 0x00000001 output... 206c1:2000800:82ba2223:f8bfbff checking whether mmx is supported... yes checking whether sse is supported... yes checking whether sse2 is supported... yes checking whether sse3 is supported... yes checking whether ssse3 is supported... yes checking whether sse4.1 is supported... yes checking whether sse4.2 is supported... yes checking whether avx is supported... no checking whether C++ compiler accepts -mmmx... yes checking whether C++ compiler accepts -msse... yes checking whether C++ compiler accepts -msse2... yes checking whether C++ compiler accepts -msse3... yes checking whether C++ compiler accepts -mssse3... yes checking whether C++ compiler accepts -msse4.1... yes checking whether C++ compiler accepts -msse4.2... yes checking for doxygen... /usr/bin/doxygen checking for perl... /usr/bin/perl checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Doxyfile config.status: creating lib/Makefile config.status: creating src/Makefile config.status: creating lib/config.h config.status: lib/config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode make[2]: Entering directory '/<>/lib' rm -rf ../doxygen-doc SRCDIR='.' PROJECT='libfreecontact' DOCDIR='../doxygen-doc' VERSION='1.0.21' PERL_PATH='/usr/bin/perl' HAVE_DOT='NO' GENERATE_MAN='NO' GENERATE_RTF='NO' GENERATE_XML='NO' GENERATE_HTMLHELP='NO' GENERATE_CHI='NO' GENERATE_HTML='YES' GENERATE_LATEX='NO' /usr/bin/doxygen ./Doxyfile warning: Tag `XML_SCHEMA' at line 1478 of file `./Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `XML_DTD' at line 1484 of file `./Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: source ../examples is not a readable file or directory... skipping. Notice: Output directory `../doxygen-doc' does not exist. I have created it for you. Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /<>/lib Reading and parsing tag files Parsing files Preprocessing /<>/lib/config.h... Parsing file /<>/lib/config.h... Preprocessing /<>/lib/freecontact.cpp... Parsing file /<>/lib/freecontact.cpp... Preprocessing /<>/lib/freecontact.h... Parsing file /<>/lib/freecontact.h... Reading /<>/lib/glassofast-real.f90... Prepassing fixed form of /<>/lib/glassofast-real.f90 Parsing file /<>/lib/glassofast-real.f90... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Associating documentation with classes... Computing nesting relations for classes... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Sorting lists... Freeing entry tree Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Computing dependencies between directories... Generating citations page... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file config.h... Generating code for file freecontact.cpp... Generating code for file freecontact.h... Generating code for file glassofast-real.f90... Generating file documentation... Generating docs for file config.h... Generating docs for file freecontact.cpp... Generating docs for file freecontact.h... Generating docs for file glassofast-real.f90... Generating page documentation... Generating group documentation... Generating class documentation... Generating namespace index... Generating docs for namespace freecontact Generating docs for compound freecontact::_glasso_timer... Generating docs for compound freecontact::_rawscore_calc_t... Generating docs for compound freecontact::af_vector... Generating docs for compound freecontact::ali_t... Generating docs for compound freecontact::alilen_error... Generating docs for compound freecontact::contact_t... Generating docs for compound freecontact::cov_vector... Generating docs for compound freecontact::ct_vector... Generating docs for compound freecontact::d2matrix... Generating docs for compound freecontact::icme_timeout_error... Generating docs for compound freecontact::parset_t... Generating docs for compound freecontact::pf_vector... Generating docs for compound freecontact::predictor... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating module index... Generating namespace index... Generating namespace member index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... lookup cache used 373/65536 hits=5341 misses=375 finished... make[2]: Leaving directory '/<>/lib' make[1]: Leaving directory '/<>' dh_auto_build -O--parallel make -j4 make[1]: Entering directory '/<>' Making all in lib make[2]: Entering directory '/<>/lib' make all-am make[3]: Entering directory '/<>/lib' /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libfreecontact_la-freecontact.lo `test -f 'freecontact.cpp' || echo './'`freecontact.cpp /bin/bash ../libtool --tag=FC --mode=compile gfortran -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c -o libfreecontact_la-glassofast-real.lo `test -f 'glassofast-real.f90' || echo './'`glassofast-real.f90 libtool: compile: gfortran -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c glassofast-real.f90 -fPIC -o .libs/libfreecontact_la-glassofast-real.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c freecontact.cpp -fPIC -DPIC -o .libs/libfreecontact_la-freecontact.o libtool: compile: gfortran -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c glassofast-real.f90 -o libfreecontact_la-glassofast-real.o >/dev/null 2>&1 In file included from freecontact.cpp:32:0: freecontact.h:69:54: warning: ignoring attributes on template argument ‘__m128i {aka __vector(2) long long int}’ [-Wignored-attributes] class LIBFREEC_API ali_t : public std::vector<__m128i> ^ In file included from freecontact.cpp:32:0: freecontact.h:113:56: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ali_t& push(const std::vector& __al) throw (alilen_error); ^~~~~ freecontact.h:116:50: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] inline ali_t& push(const std::string& __l) throw (alilen_error) ^~~~~ In file included from freecontact.cpp:32:0: freecontact.h: In constructor ‘freecontact::ali_t::ali_t(uint16_t)’: freecontact.h:80:79: warning: ignoring attributes on template argument ‘__m128i {aka __vector(2) long long int}’ [-Wignored-attributes] ali_t( const uint16_t __alilen = 0 ) : std::vector<__m128i>(), seqcnt(0), alilen(__alilen), alilen16(( alilen-1 )/16 + 1), alilenpad( 16 * alilen16 ) ^ In file included from freecontact.cpp:32:0: freecontact.h: At global scope: freecontact.h:185:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ freecontact.h:219:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ freecontact.h:227:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ freecontact.h:234:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) ^~~~~ freecontact.cpp: In destructor ‘virtual freecontact::_glasso_timer::~_glasso_timer()’: freecontact.cpp:232:83: warning: throw will always call terminate() [-Wterminate] if (timer_delete(_timerid) == -1) throw std::runtime_error(strerror(errno)); ^ freecontact.cpp:232:83: note: in C++11 destructors default to noexcept freecontact.cpp: At global scope: freecontact.cpp:240:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) ^~~~~ freecontact.cpp:439:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) ^~~~~ freecontact.cpp: In member function ‘freecontact::predictor::cont_res_t freecontact::predictor::run(const freecontact::ali_t&, const freq_vec_t&, double, double, double, uint16_t, double, double, bool, double, bool, bool, double, int, time_t, freecontact::predictor::time_res_t*)’: freecontact.cpp:545:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] if(__timing) (*__timing)["pairfreq"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "calculated pair frequency table in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } ^~ freecontact.cpp:545:82: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the ‘if’ if(__timing) (*__timing)["pairfreq"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "calculated pair frequency table in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } ^~ freecontact.cpp:690:13: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] if(__timing) (*__timing)["shrink"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "\nshrank covariance matrix in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } ^~ freecontact.cpp:690:84: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the ‘if’ if(__timing) (*__timing)["shrink"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "\nshrank covariance matrix in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } ^~ freecontact.cpp: At global scope: freecontact.cpp:976:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) ^~~~~ freecontact.cpp: In member function ‘freecontact::predictor::cont_res_t freecontact::predictor::run(const freecontact::ali_t&, double, double, double, uint16_t, double, double, bool, double, bool, bool, double, bool, int, time_t, freecontact::predictor::time_res_t*)’: freecontact.cpp:995:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] if(__timing) (*__timing)["all"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "all done in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6); } ^~ freecontact.cpp:995:77: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the ‘if’ if(__timing) (*__timing)["all"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "all done in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6); } ^~ freecontact.cpp: At global scope: freecontact.cpp:1001:63: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ali_t& ali_t::push(const std::vector& __al) throw (alilen_error) ^~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c freecontact.cpp -o libfreecontact_la-freecontact.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link g++ -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -pthread -version-info 0:0:0 -Wl,-Bsymbolic-functions -Wl,-z,relro -o libfreecontact.la -rpath /usr/lib/x86_64-linux-gnu libfreecontact_la-freecontact.lo libfreecontact_la-glassofast-real.lo -lrt -L/usr/lib/gcc/x86_64-linux-gnu/7 -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/7/../../.. -lgfortran -lm -lquadmath -lblas -llapack libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/7/crtbeginS.o .libs/libfreecontact_la-freecontact.o .libs/libfreecontact_la-glassofast-real.o -lrt -L/usr/lib/gcc/x86_64-linux-gnu/7 -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/7/../../.. -lgfortran -lquadmath -lblas -llapack -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/7/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu/crtn.o -fopenmp -pthread -g -O2 -fstack-protector-strong -pthread -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -fopenmp -pthread -Wl,-soname -Wl,libfreecontact.so.0 -o .libs/libfreecontact.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libfreecontact.so.0" && ln -s "libfreecontact.so.0.0.0" "libfreecontact.so.0") libtool: link: (cd ".libs" && rm -f "libfreecontact.so" && ln -s "libfreecontact.so.0.0.0" "libfreecontact.so") libtool: link: ar cru .libs/libfreecontact.a libfreecontact_la-freecontact.o libfreecontact_la-glassofast-real.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libfreecontact.a libtool: link: ( cd ".libs" && rm -f "libfreecontact.la" && ln -s "../libfreecontact.la" "libfreecontact.la" ) make[3]: Leaving directory '/<>/lib' make[2]: Leaving directory '/<>/lib' Making all in src make[2]: Entering directory '/<>/src' g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-freecontact.o `test -f 'freecontact.cpp' || echo './'`freecontact.cpp xsdcxx cxx-tree --location-map http://bioxsd.org/BioXSD-1.1.xsd=BioXSD-1.1.xsd \ --namespace-map http://rostlab.org/freecontact/input=freecontact_input_xsd \ --namespace-map http://rostlab.org/freecontact/output=freecontact_output_xsd \ --namespace-map http://bioxsd.org/BioXSD-1.1=BioXSD \ --generate-serialization --generate-doxygen \ --generate-polymorphic --polymorphic-type-all \ --omit-default-attributes \ --root-element-all \ --hxx-suffix _xsd.hxx --cxx-suffix _xsd.cxx \ BioXSD-1.1.xsd sed -e 's|__pkgdatadir__|/usr/share/freecontact|g;s|__examplesdir__|/usr/share/doc/freecontact/examples|g;s|__sysconfdir__|/etc|g;s|__bindir__|/usr/bin|g;s|__PACKAGE_VERSION__|1.0.21|g' "freecontact.cpp" | \ pod2man --utf8 -c 'User Commands' -r "1.0.21" -name FREECONTACT > "freecontact.1" xsdcxx cxx-tree --location-map http://bioxsd.org/BioXSD-1.1.xsd=BioXSD-1.1.xsd \ --namespace-map http://rostlab.org/freecontact/input=freecontact_input_xsd \ --namespace-map http://rostlab.org/freecontact/output=freecontact_output_xsd \ --namespace-map http://bioxsd.org/BioXSD-1.1=BioXSD \ --generate-serialization --generate-doxygen \ --generate-polymorphic --polymorphic-type-all \ --omit-default-attributes \ --root-element-all \ --hxx-suffix _xsd.hxx --cxx-suffix _xsd.cxx \ freecontact_input.xsd xsdcxx cxx-tree --location-map http://bioxsd.org/BioXSD-1.1.xsd=BioXSD-1.1.xsd \ --namespace-map http://rostlab.org/freecontact/input=freecontact_input_xsd \ --namespace-map http://rostlab.org/freecontact/output=freecontact_output_xsd \ --namespace-map http://bioxsd.org/BioXSD-1.1=BioXSD \ --generate-serialization --generate-doxygen \ --generate-polymorphic --polymorphic-type-all \ --omit-default-attributes \ --root-element-all \ --hxx-suffix _xsd.hxx --cxx-suffix _xsd.cxx \ freecontact_output.xsd g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-BioXSD-1.1_xsd.o `test -f 'BioXSD-1.1_xsd.cxx' || echo './'`BioXSD-1.1_xsd.cxx g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-freecontact_input_xsd.o `test -f 'freecontact_input_xsd.cxx' || echo './'`freecontact_input_xsd.cxx g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-_write_bioxsd.o `test -f '_write_bioxsd.cpp' || echo './'`_write_bioxsd.cpp In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1507:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequence (::std::auto_ptr< sequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1585:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1665:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1741:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1817:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1893:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] translationData (::std::auto_ptr< translationData_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1969:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1992:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] BiosequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2105:45: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2186:44: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2267:38: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2348:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2611:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3051:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3109:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] len (::std::auto_ptr< len_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3287:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3366:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3442:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3500:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3567:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3877:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3935:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] bases (::std::auto_ptr< bases_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4110:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4186:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4338:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4414:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4490:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4566:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4644:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4720:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4796:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5064:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedDirection (::std::auto_ptr< reversedDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5589:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5798:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] className (::std::auto_ptr< className_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5938:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] properties (::std::auto_ptr< properties_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6115:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6385:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6627:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6703:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6843:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceName (::std::auto_ptr< occurrenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6919:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6995:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7203:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] frame (::std::auto_ptr< frame_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7279:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignment_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7588:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] referenceSequence (::std::auto_ptr< referenceSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7742:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FeatureRecord (::std::auto_ptr< referenceSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7901:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] predicted (::std::auto_ptr< predicted_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7977:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] experimental (::std::auto_ptr< experimental_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8130:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8217:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] MethodResult (::std::auto_ptr< method_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8357:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8444:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] Result (::std::auto_ptr< methodIdRef_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8602:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8678:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8818:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8973:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dataReference (::std::auto_ptr< dataReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9113:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9189:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reliability (::std::auto_ptr< reliability_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9212:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ExperimentalEvidence (::std::auto_ptr< dataReference_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9566:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9642:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] index (::std::auto_ptr< index_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9718:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] unit (::std::auto_ptr< unit_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9794:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9974:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10032:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] value (::std::auto_ptr< value_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10108:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10285:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10361:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10679:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10755:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10813:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11072:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11148:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11206:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11465:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11544:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11678:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11745:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12003:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12061:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12377:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12517:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPoint (::std::auto_ptr< nextPoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPartition (::std::auto_ptr< nextPartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12669:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePoint (::std::auto_ptr< samePoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12745:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePartition (::std::auto_ptr< samePartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12821:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] outside (::std::auto_ptr< outside_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13071:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] correspondance (::std::auto_ptr< correspondance_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13211:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13351:39: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13597:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13832:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] geneticCode (::std::auto_ptr< geneticCode_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13908:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13984:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14226:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbName (::std::auto_ptr< dbName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14304:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbUri (::std::auto_ptr< dbUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14380:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbVersion (::std::auto_ptr< dbVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14511:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14587:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14663:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14739:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14815:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14894:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15075:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15151:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryUri (::std::auto_ptr< entryUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15227:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryVersion (::std::auto_ptr< entryVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15481:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyName (::std::auto_ptr< ontologyName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15559:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyUri (::std::auto_ptr< ontologyUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15635:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15870:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15946:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] conceptUri (::std::auto_ptr< conceptUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16028:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] term (::std::auto_ptr< term_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16207:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesName (::std::auto_ptr< speciesName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16283:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesNote (::std::auto_ptr< speciesNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16459:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16538:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequence (::std::auto_ptr< supersequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16617:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequenceName (::std::auto_ptr< supersequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16693:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16769:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16845:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17130:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17206:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] uri (::std::auto_ptr< uri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17282:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] version (::std::auto_ptr< version_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17358:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17434:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17510:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17586:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17662:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17738:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17817:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:22916:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23505:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23645:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] missing (::std::auto_ptr< missing_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23787:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23961:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24019:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignedSequence (::std::auto_ptr< alignedSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24042:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignedSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24200:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24276:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24352:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24428:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24504:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24580:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24658:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24734:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24810:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24970:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25046:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25133:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25932:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] code (::std::auto_ptr< code_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26122:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] aminoacid (::std::auto_ptr< aminoacid_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26253:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26857:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26933:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27009:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27164:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27316:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27468:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27620:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27773:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27925:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28001:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28088:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation1 (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28547:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28623:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28699:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28775:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28851:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28927:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29003:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1507:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequence (::std::auto_ptr< sequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1585:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29244:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1665:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29415:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1741:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1817:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localIdRef (::std::auto_ptr< localIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1893:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] translationData (::std::auto_ptr< translationData_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1969:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1992:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] BiosequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:2105:45: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:2186:44: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:2267:38: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:2348:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:723:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] flat (::std::auto_ptr< flat_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:746:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FcAlignment (::std::auto_ptr< flat_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:847:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:863:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:881:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:897:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:2611:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:913:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:931:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:951:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:973:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:996:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:1013:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:1029:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:1047:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:1061:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:1078:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3051:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ freecontact_input_xsd.cxx:67:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] flat (::std::auto_ptr< flat_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3109:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] len (::std::auto_ptr< len_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3287:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3366:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3442:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3500:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3567:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3877:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3935:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] bases (::std::auto_ptr< bases_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4110:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4186:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4338:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4414:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4490:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4566:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4644:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4720:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4796:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:5064:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedDirection (::std::auto_ptr< reversedDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:5589:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:5798:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] className (::std::auto_ptr< className_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:5938:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] properties (::std::auto_ptr< properties_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:6115:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:6385:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:6627:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:6703:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:6843:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceName (::std::auto_ptr< occurrenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:6919:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:6995:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:7203:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] frame (::std::auto_ptr< frame_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:7279:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:7419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignment_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:7588:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] referenceSequence (::std::auto_ptr< referenceSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:7742:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FeatureRecord (::std::auto_ptr< referenceSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:7901:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] predicted (::std::auto_ptr< predicted_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:7977:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] experimental (::std::auto_ptr< experimental_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:97:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FcAlignment (::std::auto_ptr< flat_type > flat) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8130:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8217:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] MethodResult (::std::auto_ptr< method_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In member function ‘void freecontact_input_xsd::FcAlignment::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: freecontact_input_xsd.cxx:139:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8357:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8444:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] Result (::std::auto_ptr< methodIdRef_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8602:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8678:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8818:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8973:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dataReference (::std::auto_ptr< dataReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9113:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9189:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reliability (::std::auto_ptr< reliability_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9212:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ExperimentalEvidence (::std::auto_ptr< dataReference_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9566:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9642:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] index (::std::auto_ptr< index_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9718:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] unit (::std::auto_ptr< unit_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9794:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:150:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< flat_type > r ( ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9974:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10032:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] value (::std::auto_ptr< value_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10108:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10285:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10361:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:212:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10679:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10755:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10813:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(const string&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:229:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:234:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11072:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11148:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(const string&, xml_schema::error_handler&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:251:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11206:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:256:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11465:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11544:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11678:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11745:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12003:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(const string&, xercesc_3_1::DOMErrorHandler&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:269:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:274:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12061:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ freecontact_input_xsd.cxx:287:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:301:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:311:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:325:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:340:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:351:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(xercesc_3_1::InputSource&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:364:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:369:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(xercesc_3_1::InputSource&, xml_schema::error_handler&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:382:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:387:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(xercesc_3_1::InputSource&, xercesc_3_1::DOMErrorHandler&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:400:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:405:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(const xercesc_3_1::DOMDocument&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:415:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12377:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:424:12: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:433:14: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:451:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12517:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPoint (::std::auto_ptr< nextPoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(xsd::cxx::xml::dom::auto_ptr, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:473:12: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPartition (::std::auto_ptr< nextPartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:483:14: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12669:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePoint (::std::auto_ptr< samePoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12745:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePartition (::std::auto_ptr< samePartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12821:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] outside (::std::auto_ptr< outside_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:13071:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] correspondance (::std::auto_ptr< correspondance_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:13211:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:13351:39: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:13597:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:13832:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] geneticCode (::std::auto_ptr< geneticCode_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:13908:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:13984:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14226:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbName (::std::auto_ptr< dbName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14304:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbUri (::std::auto_ptr< dbUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14380:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbVersion (::std::auto_ptr< dbVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14511:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14587:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14663:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14739:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1507:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequence (::std::auto_ptr< sequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14815:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14894:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1585:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1665:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1741:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1817:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1893:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] translationData (::std::auto_ptr< translationData_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1969:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1992:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] BiosequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15075:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15151:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryUri (::std::auto_ptr< entryUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2105:45: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15227:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryVersion (::std::auto_ptr< entryVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15481:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyName (::std::auto_ptr< ontologyName_type > p); ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2186:44: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2267:38: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15559:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyUri (::std::auto_ptr< ontologyUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2348:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15635:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15870:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2611:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15946:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] conceptUri (::std::auto_ptr< conceptUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16028:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] term (::std::auto_ptr< term_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16207:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesName (::std::auto_ptr< speciesName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16283:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesNote (::std::auto_ptr< speciesNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16459:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3051:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3109:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] len (::std::auto_ptr< len_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16538:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequence (::std::auto_ptr< supersequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16617:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequenceName (::std::auto_ptr< supersequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16693:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16769:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3287:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3366:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3442:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16845:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3500:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3567:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17130:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17206:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] uri (::std::auto_ptr< uri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3877:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3935:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] bases (::std::auto_ptr< bases_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17282:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] version (::std::auto_ptr< version_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17358:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17434:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4110:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4186:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17510:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4338:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4414:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17586:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17662:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17738:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4490:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17817:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4566:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4644:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4720:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4796:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:5064:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedDirection (::std::auto_ptr< reversedDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:5589:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:5798:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] className (::std::auto_ptr< className_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:5938:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] properties (::std::auto_ptr< properties_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6115:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6385:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6627:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6703:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6843:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceName (::std::auto_ptr< occurrenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6919:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6995:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7203:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] frame (::std::auto_ptr< frame_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7279:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignment_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7588:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] referenceSequence (::std::auto_ptr< referenceSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7742:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FeatureRecord (::std::auto_ptr< referenceSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:22916:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7901:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] predicted (::std::auto_ptr< predicted_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7977:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] experimental (::std::auto_ptr< experimental_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8130:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8217:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] MethodResult (::std::auto_ptr< method_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8357:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:23505:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8444:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] Result (::std::auto_ptr< methodIdRef_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8602:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8678:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:23645:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] missing (::std::auto_ptr< missing_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:23787:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8818:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8973:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dataReference (::std::auto_ptr< dataReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:23961:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9113:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9189:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reliability (::std::auto_ptr< reliability_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9212:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ExperimentalEvidence (::std::auto_ptr< dataReference_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24019:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignedSequence (::std::auto_ptr< alignedSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24042:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignedSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24200:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24276:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24352:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24428:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24504:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24580:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9566:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9642:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] index (::std::auto_ptr< index_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24658:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9718:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] unit (::std::auto_ptr< unit_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9794:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24734:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24810:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24970:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:25046:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:25133:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9974:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10032:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] value (::std::auto_ptr< value_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10108:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10285:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10361:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10679:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10755:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10813:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11072:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11148:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11206:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11465:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11544:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11678:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11745:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12003:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12061:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:25778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:25932:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] code (::std::auto_ptr< code_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12377:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:26122:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] aminoacid (::std::auto_ptr< aminoacid_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:26253:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12517:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPoint (::std::auto_ptr< nextPoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPartition (::std::auto_ptr< nextPartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12669:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePoint (::std::auto_ptr< samePoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12745:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePartition (::std::auto_ptr< samePartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12821:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] outside (::std::auto_ptr< outside_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:26781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:26857:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:26933:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:27009:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:27164:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:27316:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:27468:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:27620:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:27773:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:27925:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28001:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13071:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] correspondance (::std::auto_ptr< correspondance_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28088:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation1 (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13211:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13351:39: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13597:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28547:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28623:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28699:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13832:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] geneticCode (::std::auto_ptr< geneticCode_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28775:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13908:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13984:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28851:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28927:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:29003:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:29244:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:29415:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:29826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localIdRef (::std::auto_ptr< localIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14226:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbName (::std::auto_ptr< dbName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14304:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbUri (::std::auto_ptr< dbUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14380:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbVersion (::std::auto_ptr< dbVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14511:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14587:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14663:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14739:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14815:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14894:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15075:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15151:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryUri (::std::auto_ptr< entryUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15227:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryVersion (::std::auto_ptr< entryVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15481:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyName (::std::auto_ptr< ontologyName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15559:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyUri (::std::auto_ptr< ontologyUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15635:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15870:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15946:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] conceptUri (::std::auto_ptr< conceptUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16028:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] term (::std::auto_ptr< term_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16207:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesName (::std::auto_ptr< speciesName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16283:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesNote (::std::auto_ptr< speciesNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:110:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequence (::std::auto_ptr< sequence_type > x) ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16459:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16538:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequence (::std::auto_ptr< supersequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16617:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequenceName (::std::auto_ptr< supersequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16693:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16769:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16845:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:140:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:170:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17130:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17206:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] uri (::std::auto_ptr< uri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:200:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17282:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] version (::std::auto_ptr< version_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17358:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17434:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17510:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:230:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17586:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17662:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17738:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17817:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:260:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] translationData (::std::auto_ptr< translationData_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:290:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:376:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:420:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:444:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] len (::std::auto_ptr< len_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:478:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:508:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:538:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:562:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:592:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:634:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:658:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] bases (::std::auto_ptr< bases_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:692:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:722:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:752:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:782:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:812:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:842:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:22916:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:872:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:902:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:932:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:962:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:23505:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1046:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedDirection (::std::auto_ptr< reversedDirection_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:23645:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] missing (::std::auto_ptr< missing_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1114:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:23787:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ BioXSD-1.1_xsd.cxx:1180:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] className (::std::auto_ptr< className_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1228:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] properties (::std::auto_ptr< properties_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:23961:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24019:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignedSequence (::std::auto_ptr< alignedSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24042:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignedSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] specificFeatureName (::std::auto_ptr< specificFeatureName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1346:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24200:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24276:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24352:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24428:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1398:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24504:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24580:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24658:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24734:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24810:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1428:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24970:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:25046:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1476:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceName (::std::auto_ptr< occurrenceName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1506:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceNote (::std::auto_ptr< occurrenceNote_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1536:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1602:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] frame (::std::auto_ptr< frame_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1632:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1680:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignment_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1708:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] referenceSequence (::std::auto_ptr< referenceSequence_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] predicted (::std::auto_ptr< predicted_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1808:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] experimental (::std::auto_ptr< experimental_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1836:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1882:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:25133:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1934:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1964:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2012:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2040:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dataReference (::std::auto_ptr< dataReference_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2088:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2118:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reliability (::std::auto_ptr< reliability_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2206:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2236:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] index (::std::auto_ptr< index_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2266:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] unit (::std::auto_ptr< unit_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2296:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2330:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2354:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] value (::std::auto_ptr< value_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2384:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2418:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2448:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2472:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2516:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2546:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2570:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2614:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2644:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2668:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2712:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2742:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2772:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2796:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2870:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2894:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2956:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3004:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPoint (::std::auto_ptr< nextPoint_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3034:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPartition (::std::auto_ptr< nextPartition_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3064:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePoint (::std::auto_ptr< samePoint_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3094:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePartition (::std::auto_ptr< samePartition_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3124:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] outside (::std::auto_ptr< outside_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3162:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] correspondance (::std::auto_ptr< correspondance_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3210:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3258:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3296:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:25778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3348:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] geneticCode (::std::auto_ptr< geneticCode_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:25932:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] code (::std::auto_ptr< code_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3378:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26122:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] aminoacid (::std::auto_ptr< aminoacid_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26253:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3408:40: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3446:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbName (::std::auto_ptr< dbName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3476:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbUri (::std::auto_ptr< dbUri_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3506:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbVersion (::std::auto_ptr< dbVersion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26857:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26933:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3560:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3590:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3650:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3680:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3710:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3744:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3774:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryUri (::std::auto_ptr< entryUri_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3804:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryVersion (::std::auto_ptr< entryVersion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3834:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3868:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyName (::std::auto_ptr< ontologyName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27009:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3898:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyUri (::std::auto_ptr< ontologyUri_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3928:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyVersion (::std::auto_ptr< ontologyVersion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3986:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4016:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] conceptUri (::std::auto_ptr< conceptUri_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27164:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4046:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] term (::std::auto_ptr< term_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27316:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4080:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesName (::std::auto_ptr< speciesName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27468:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4110:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesNote (::std::auto_ptr< speciesNote_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27620:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ BioXSD-1.1_xsd.cxx:4144:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4174:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequence (::std::auto_ptr< supersequence_type > x) ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27773:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4204:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequenceName (::std::auto_ptr< supersequenceName_type > x) ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27925:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28001:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4234:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceVersion (::std::auto_ptr< sequenceVersion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4264:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4294:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4358:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4388:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] uri (::std::auto_ptr< uri_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4418:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] version (::std::auto_ptr< version_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4448:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4478:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4508:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4538:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4568:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4598:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4628:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28088:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation1 (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28547:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28623:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28699:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28775:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28851:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28927:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:29003:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5311:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:29244:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5439:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] canonicalVariant (::std::auto_ptr< canonicalVariant_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:29415:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5487:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] missing (::std::auto_ptr< missing_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5535:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5569:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:29826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localIdRef (::std::auto_ptr< localIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignedSequence (::std::auto_ptr< alignedSequence_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5627:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5657:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5687:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5717:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5747:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5777:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5807:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5837:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5867:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5895:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5925:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6089:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6117:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] code (::std::auto_ptr< code_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6195:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] aminoacid (::std::auto_ptr< aminoacid_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6249:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:723:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] flat (::std::auto_ptr< flat_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:746:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FcAlignment (::std::auto_ptr< flat_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6359:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6389:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:847:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6419:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6449:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > x) ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:863:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:881:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:897:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6477:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:913:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6505:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > x) ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:931:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:951:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ BioXSD-1.1_xsd.cxx:6533:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:973:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6561:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:996:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:1013:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:1029:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6589:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > x) ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:1047:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:1061:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:1078:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6617:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6647:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6707:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6737:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6767:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6797:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6827:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6857:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] databaseIdRef (::std::auto_ptr< databaseIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6887:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6917:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6969:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7003:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7103:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localIdRef (::std::auto_ptr< localIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:681:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:697:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:715:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:731:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:747:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:765:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:785:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:807:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:830:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:847:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:863:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:881:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:895:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:912:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7570:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] BiosequenceRecord (::std::auto_ptr< sequence_type > sequence) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::BiosequenceRecord::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:7630:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7641:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7658:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7669:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< species_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7686:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7697:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< reference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7714:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7725:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< name_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7742:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7753:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< note_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7770:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< translationData_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7798:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7809:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< inlineBaseQuality_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:7880:43: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type > sequence) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7929:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type > sequence) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7978:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] NucleotideSequenceRecord (::std::auto_ptr< sequence_type > sequence) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8027:35: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] AminoacidSequenceRecord (::std::auto_ptr< sequence_type > sequence) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::BiosequenceAlignment::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:8118:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8127:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< alignedBy_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8143:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8152:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< alignedSequence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8168:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8179:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< note_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::AlignedBiosequence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:8924:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8935:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< localAlignmentPosition_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8952:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8963:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceRecord_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8980:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8991:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceReference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9008:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9019:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceName_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9036:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9047:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< species_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9064:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9075:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< genomeBuild_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9092:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9103:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< chromosome_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9120:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9131:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< subsequencePosition_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9148:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9159:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< variantAccession_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9176:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9187:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< variantNote_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9204:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9213:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< gap_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9229:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9238:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< insert_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9254:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9263:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< frameshift_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9279:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9290:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< reversedDirection_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9307:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9316:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceScore_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::FeatureType::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:9610:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9621:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< name_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9638:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9647:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< equalConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9663:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9672:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< equalAlias_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9688:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9699:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< className_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9716:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9725:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< classConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9741:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9752:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< properties_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::FeatureTypeDetails::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:9866:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9877:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< specificFeatureName_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9894:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9903:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< specificFeatureConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9919:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9928:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< specificFeatureAlias_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9944:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9953:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< databaseEntry_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9969:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9980:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< note_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9998:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< association_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::FeatureOccurrenceData::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10123:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10134:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< appliesToWholeSequence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10151:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10162:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< position_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10179:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10188:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< occurrenceEntryReference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10204:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10215:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< occurrenceName_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10232:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10243:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< occurrenceNote_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10260:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10271:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< featureTypeDetails_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10288:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10297:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< score_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10313:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10322:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< evidence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10339:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< frame_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10352:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10363:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< phase_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10381:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< variation_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10392:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< alignment_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:10460:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FeatureRecord (::std::auto_ptr< referenceSequence_type > referenceSequence) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::FeatureRecord::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10509:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< referenceSequence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10523:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< annotation_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10534:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< blockWithOccurrenceReferences_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::Evidence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10633:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10644:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< predicted_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10661:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10672:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< experimental_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:10733:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] MethodResult (::std::auto_ptr< method_type > method) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::MethodResult::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10779:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< method_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10792:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10801:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< score_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:10868:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] Result (::std::auto_ptr< methodIdRef_type > methodIdRef) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::Result::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10913:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10924:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< methodIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10941:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10950:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< score_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::PredictionResult::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:11060:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11071:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< method_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11088:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11099:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< methodIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11116:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11125:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< score_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11141:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11152:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< verdict_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:11217:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ExperimentalEvidence (::std::auto_ptr< dataReference_type > dataReference) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::ExperimentalEvidence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:11268:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11279:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< dataReference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11296:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< citation_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11321:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11332:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< verdict_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11349:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11360:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< reliability_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::ScoreType::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:11482:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11491:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< concept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11507:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11516:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< method_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11532:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11541:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< methodIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::Score::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:11679:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11690:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< position_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::GeneralSequencePosition::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:12613:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12622:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< point_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12638:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12649:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< insertion_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12666:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12675:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< segment_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12691:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12702:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< nextPoint_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12719:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12730:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< nextPartition_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12747:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12758:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< samePoint_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12775:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12786:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< samePartition_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12803:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12814:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< outside_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::GeneralOutsideSequencePosition::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:12970:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12981:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< correspondance_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12998:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13007:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< point_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13023:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13034:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< insertion_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13051:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13060:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< segment_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13076:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13087:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< explicitSequenceReference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::GeneticCode::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:13231:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13242:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< reference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13260:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< codon_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::TranslationData::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:13354:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13365:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< geneticCode_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13382:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13393:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< phase_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13410:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13421:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< reversedTranslationDirection_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::SequenceReference::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:14184:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14195:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< subsequencePosition_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14212:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14223:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< supersequence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14240:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14251:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< supersequenceName_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::Method::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:14410:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14419:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< categoryConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14435:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14444:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< citation_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::association::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:17632:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17643:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< relationName_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17660:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17669:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< relationConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17685:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17694:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< associatedConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17710:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17719:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< associatedDatabaseEntry_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17735:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17744:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< associatedDatabase_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17760:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17769:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< associatedFeature_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::variation::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:17927:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17938:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< canonicalVariant_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17955:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17964:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< variant_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17980:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17991:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< missing_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18008:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18017:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< score_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18033:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18044:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< position_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:18102:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignedSequence_type > alignedSequence) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::alignment::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:18148:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< alignmentOfReference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18161:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18172:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< alignedSequence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::referenceSequence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:18292:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18303:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceRecord_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18320:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18331:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceReference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18348:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18359:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceName_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18376:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18387:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< species_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18404:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18415:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< genomeBuild_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18432:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18443:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< chromosome_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18460:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< subsequencePosition_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18488:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18499:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< variantAccession_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18516:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18527:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< variantNote_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:18590:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation (::std::auto_ptr< feature_type > feature) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::annotation::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:18638:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18649:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< feature_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18667:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< condensedReferences_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18680:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18689:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< occurrence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::blockWithOccurrenceReferences::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:18801:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< database_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18812:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ontology_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18823:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< semanticConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18834:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< method_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18845:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< scoreType_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18856:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< annotation_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::alignmentOfReference::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:19177:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19186:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< gap_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19202:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19211:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< insert_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19227:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19236:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< frameshift_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19252:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19261:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceScore_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::condensedReferences::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:19360:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19371:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< method_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19388:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19399:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ontology_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19416:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19427:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< database_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19444:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19455:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< scoreType_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:19944:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation1 (::std::auto_ptr< feature_type > feature) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:22:0: ../lib/freecontact.h:69:54: warning: ignoring attributes on template argument ‘__m128i {aka __vector(2) long long int}’ [-Wignored-attributes] class LIBFREEC_API ali_t : public std::vector<__m128i> ^ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::annotation1::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:19992:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20003:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< feature_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20021:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< condensedReferences_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20035:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< occurrence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:22:0: ../lib/freecontact.h:113:56: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ali_t& push(const std::vector& __al) throw (alilen_error); ^~~~~ ../lib/freecontact.h:116:50: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] inline ali_t& push(const std::string& __l) throw (alilen_error) ^~~~~ In file included from _write_bioxsd.cpp:22:0: ../lib/freecontact.h: In constructor ‘freecontact::ali_t::ali_t(uint16_t)’: ../lib/freecontact.h:80:79: warning: ignoring attributes on template argument ‘__m128i {aka __vector(2) long long int}’ [-Wignored-attributes] ali_t( const uint16_t __alilen = 0 ) : std::vector<__m128i>(), seqcnt(0), alilen(__alilen), alilen16(( alilen-1 )/16 + 1), alilenpad( 16 * alilen16 ) ^ In file included from _write_bioxsd.cpp:22:0: ../lib/freecontact.h: At global scope: ../lib/freecontact.h:185:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ ../lib/freecontact.h:219:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ ../lib/freecontact.h:227:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ ../lib/freecontact.h:234:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) ^~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::condensedReferences1::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:20290:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20301:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< method_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20318:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20329:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< methodIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20346:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20357:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ontology_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20374:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20385:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ontologyIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20402:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20413:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< database_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20430:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20441:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< databaseIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20458:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20469:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< scoreType_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20486:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20497:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< scoreTypeIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::occurrence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:20598:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< association_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:30:1: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr _get_bxScore(const fc::contact_t& __ct, const std::string& __scid); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp: In function ‘std::__cxx11::string _xml_flatali(std::istream&, bool)’: _write_bioxsd.cpp:38:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr xml( fix::alignment(__is) ); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp: In function ‘void _write_bioxsd(const freecontact::ali_t&, const resn_mapper_t&, const std::map, std::vector >&, bool)’: _write_bioxsd.cpp:53:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr seqSeg_p(new BioXSD::SequenceSegment()); ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::association1::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:20702:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20713:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< relationName_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20730:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20739:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< relationConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:56:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr seqPos_p(new BioXSD::SequencePosition()); ^~~~~~~~ BioXSD-1.1_xsd.cxx:20755:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20764:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< relationConceptIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20781:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< associatedFeatureOccurrence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:59:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr seqRef_p(new BioXSD::SequenceReference()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:63:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr seqRec_p( new BioXSD::GeneralAminoacidSequenceRecord( BioXSD::GeneralAminoacidSequence( ucq ))); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::associatedFeatureOccurrence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:20868:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:67:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr refSeq_p(new BioXSD::referenceSequence()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20877:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< score_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:73:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr metCatCon_p(new BioXSD::SemanticConcept()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:79:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr metCit_p(new BioXSD::EntryReference()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:82:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr method_p(new BioXSD::method1("freecontact", "M#fc")); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:86:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr sc_l1_p(new BioXSD::scoreType("S#l1")); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:88:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr metCit_p(new BioXSD::EntryReference()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:94:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr method_p(new BioXSD::Method("l1-norm")); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:100:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr sc_MI_p(new BioXSD::scoreType("S#MI")); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:102:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr metCit_p(new BioXSD::EntryReference()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:108:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr method_p(new BioXSD::Method("Mutual information")); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:114:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr sc_fr_p(new BioXSD::scoreType("S#fr")); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:116:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr metCit_p(new BioXSD::EntryReference()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:122:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr method_p(new BioXSD::Method("Frobenius norm")); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:128:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr featCon_p(new BioXSD::SemanticConcept()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:135:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr feat_p(new BioXSD::FeatureType()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:139:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr cref_p(new BioXSD::condensedReferences1()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:142:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr ann_p(new BioXSD::annotation1(feat_p)); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:156:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr pt1_p(new BioXSD::SequencePoint()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:158:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr pt2_p(new BioXSD::SequencePoint()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:161:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr pos_p(new BioXSD::SequencePosition()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:165:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr occ_p(new BioXSD::occurrence()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:177:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr occRef_p(new BioXSD::blockWithOccurrenceReferences()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp: At global scope: _write_bioxsd.cpp:199:1: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr _get_bxScore( const fc::contact_t& __ct, const std::string& __scid ) ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp: In function ‘std::auto_ptr _get_bxScore(const freecontact::contact_t&, const string&)’: _write_bioxsd.cpp:201:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr MI_score_p(new BioXSD::Score( bo::str(bo::format("%g") % __ct.score) )); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact.cpp:25:0: ../lib/freecontact.h:69:54: warning: ignoring attributes on template argument ‘__m128i {aka __vector(2) long long int}’ [-Wignored-attributes] class LIBFREEC_API ali_t : public std::vector<__m128i> ^ In file included from freecontact.cpp:25:0: ../lib/freecontact.h:113:56: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ali_t& push(const std::vector& __al) throw (alilen_error); ^~~~~ ../lib/freecontact.h:116:50: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] inline ali_t& push(const std::string& __l) throw (alilen_error) ^~~~~ In file included from freecontact.cpp:25:0: ../lib/freecontact.h: In constructor ‘freecontact::ali_t::ali_t(uint16_t)’: ../lib/freecontact.h:80:79: warning: ignoring attributes on template argument ‘__m128i {aka __vector(2) long long int}’ [-Wignored-attributes] ali_t( const uint16_t __alilen = 0 ) : std::vector<__m128i>(), seqcnt(0), alilen(__alilen), alilen16(( alilen-1 )/16 + 1), alilenpad( 16 * alilen16 ) ^ In file included from freecontact.cpp:25:0: ../lib/freecontact.h: At global scope: ../lib/freecontact.h:185:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ ../lib/freecontact.h:219:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ ../lib/freecontact.h:227:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ ../lib/freecontact.h:234:23: warning: dynamic exception specifications are deprecated in C++11; use ‘noexcept’ instead [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) ^~~~~ freecontact.cpp: In function ‘int main(int, char**)’: freecontact.cpp:165:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr ali_ifs_p; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/boost/function/function_base.hpp:16, from /usr/include/boost/function/detail/prologue.hpp:17, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:18, from /usr/include/boost/function/function1.hpp:11, from /usr/include/boost/program_options/value_semantic.hpp:13, from /usr/include/boost/program_options/options_description.hpp:13, from /usr/include/boost/program_options.hpp:15, from freecontact.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact.cpp:169:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ali_ifs_p = auto_ptr(new std::ifstream(vm["ali"].as().c_str())); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/boost/function/function_base.hpp:16, from /usr/include/boost/function/detail/prologue.hpp:17, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:18, from /usr/include/boost/function/function1.hpp:11, from /usr/include/boost/program_options/value_semantic.hpp:13, from /usr/include/boost/program_options/options_description.hpp:13, from /usr/include/boost/program_options.hpp:15, from freecontact.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-freecontact_output_xsd.o `test -f 'freecontact_output_xsd.cxx' || echo './'`freecontact_output_xsd.cxx In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1507:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequence (::std::auto_ptr< sequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1585:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1665:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1741:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1817:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1893:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] translationData (::std::auto_ptr< translationData_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1969:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1992:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] BiosequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2105:45: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2186:44: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2267:38: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2348:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2611:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3051:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3109:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] len (::std::auto_ptr< len_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3287:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3366:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3442:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3500:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3567:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3877:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3935:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] bases (::std::auto_ptr< bases_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4110:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4186:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4338:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4414:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4490:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4566:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4644:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4720:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4796:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5064:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedDirection (::std::auto_ptr< reversedDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5589:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5798:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] className (::std::auto_ptr< className_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5938:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] properties (::std::auto_ptr< properties_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6115:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6385:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6627:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6703:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6843:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceName (::std::auto_ptr< occurrenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6919:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6995:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7203:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] frame (::std::auto_ptr< frame_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7279:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignment_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7588:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] referenceSequence (::std::auto_ptr< referenceSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7742:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FeatureRecord (::std::auto_ptr< referenceSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7901:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] predicted (::std::auto_ptr< predicted_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7977:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] experimental (::std::auto_ptr< experimental_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8130:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8217:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] MethodResult (::std::auto_ptr< method_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8357:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8444:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] Result (::std::auto_ptr< methodIdRef_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8602:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8678:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8818:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8973:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dataReference (::std::auto_ptr< dataReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9113:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9189:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reliability (::std::auto_ptr< reliability_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9212:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ExperimentalEvidence (::std::auto_ptr< dataReference_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9566:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9642:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] index (::std::auto_ptr< index_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9718:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] unit (::std::auto_ptr< unit_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9794:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9974:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10032:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] value (::std::auto_ptr< value_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10108:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10285:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10361:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10679:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10755:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10813:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11072:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11148:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11206:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11465:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11544:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11678:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11745:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12003:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12061:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12377:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12517:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPoint (::std::auto_ptr< nextPoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPartition (::std::auto_ptr< nextPartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12669:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePoint (::std::auto_ptr< samePoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12745:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePartition (::std::auto_ptr< samePartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12821:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] outside (::std::auto_ptr< outside_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13071:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] correspondance (::std::auto_ptr< correspondance_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13211:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13351:39: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13597:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13832:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] geneticCode (::std::auto_ptr< geneticCode_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13908:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13984:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14226:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbName (::std::auto_ptr< dbName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14304:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbUri (::std::auto_ptr< dbUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14380:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbVersion (::std::auto_ptr< dbVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14511:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14587:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14663:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14739:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14815:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14894:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15075:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15151:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryUri (::std::auto_ptr< entryUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15227:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryVersion (::std::auto_ptr< entryVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15481:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyName (::std::auto_ptr< ontologyName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15559:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyUri (::std::auto_ptr< ontologyUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15635:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15870:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15946:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] conceptUri (::std::auto_ptr< conceptUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16028:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] term (::std::auto_ptr< term_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16207:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesName (::std::auto_ptr< speciesName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16283:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesNote (::std::auto_ptr< speciesNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16459:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16538:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequence (::std::auto_ptr< supersequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16617:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequenceName (::std::auto_ptr< supersequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16693:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16769:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16845:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17130:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17206:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] uri (::std::auto_ptr< uri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17282:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] version (::std::auto_ptr< version_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17358:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17434:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17510:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17586:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17662:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17738:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17817:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:22916:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23505:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23645:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] missing (::std::auto_ptr< missing_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23787:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23961:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24019:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignedSequence (::std::auto_ptr< alignedSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24042:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignedSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24200:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24276:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24352:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24428:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24504:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24580:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24658:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24734:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24810:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24970:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25046:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25133:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25932:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] code (::std::auto_ptr< code_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26122:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] aminoacid (::std::auto_ptr< aminoacid_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26253:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26857:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26933:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27009:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27164:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27316:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27468:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27620:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27773:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27925:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28001:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28088:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation1 (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28547:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28623:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28699:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28775:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28851:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28927:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29003:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29244:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29415:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localIdRef (::std::auto_ptr< localIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:681:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:697:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:715:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:731:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:747:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:765:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:785:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:807:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:830:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:847:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:863:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:881:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:895:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:912:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:68:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(const string&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:85:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:90:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(const string&, xml_schema::error_handler&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:107:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:112:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(const string&, xercesc_3_1::DOMErrorHandler&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:125:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:130:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:143:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:157:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:167:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:181:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:196:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:207:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(xercesc_3_1::InputSource&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:220:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:225:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(xercesc_3_1::InputSource&, xml_schema::error_handler&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:238:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:243:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(xercesc_3_1::InputSource&, xercesc_3_1::DOMErrorHandler&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:256:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:261:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(const xercesc_3_1::DOMDocument&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:271:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:280:12: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:289:14: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:307:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(xsd::cxx::xml::dom::auto_ptr, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:329:12: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:339:14: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ /bin/bash ../libtool --tag=CXX --mode=link g++ -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -L/usr/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o freecontact freecontact-freecontact.o freecontact-_write_bioxsd.o freecontact-freecontact_input_xsd.o freecontact-freecontact_output_xsd.o freecontact-BioXSD-1.1_xsd.o -lboost_program_options -lxerces-c ../lib/libfreecontact.la libtool: link: g++ -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/freecontact freecontact-freecontact.o freecontact-_write_bioxsd.o freecontact-freecontact_input_xsd.o freecontact-freecontact_output_xsd.o freecontact-BioXSD-1.1_xsd.o -L/usr/lib -lboost_program_options -lxerces-c ../lib/.libs/libfreecontact.so -pthread -fopenmp make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -O--parallel make -j4 check VERBOSE=1 make[1]: Entering directory '/<>' Making check in lib make[2]: Entering directory '/<>/lib' make[2]: Leaving directory '/<>/lib' Making check in src make[2]: Entering directory '/<>/src' make test_freecontact make[3]: Entering directory '/<>/src' make[3]: Nothing to be done for 'test_freecontact'. make[3]: Leaving directory '/<>/src' make check-TESTS make[3]: Entering directory '/<>/src' make[4]: Entering directory '/<>/src' PASS: test_freecontact ============================================================================ Testsuite summary for freecontact 1.0.21 ============================================================================ # TOTAL: 1 # PASS: 1 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' fakeroot debian/rules binary dh binary --parallel --with bash-completion --with autoreconf dh_testroot -O--parallel dh_prep -O--parallel dh_auto_install -O--parallel make -j4 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in lib make[2]: Entering directory '/<>/lib' make[3]: Entering directory '/<>/lib' /bin/mkdir -p '/<>/debian/tmp/usr/include' /bin/mkdir -p '/<>/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libfreecontact.la '/<>/debian/tmp/usr/lib/x86_64-linux-gnu' /usr/bin/install -c -m 644 freecontact.h '/<>/debian/tmp/usr/include' libtool: install: /usr/bin/install -c .libs/libfreecontact.so.0.0.0 /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libfreecontact.so.0.0.0 libtool: install: (cd /<>/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libfreecontact.so.0.0.0 libfreecontact.so.0 || { rm -f libfreecontact.so.0 && ln -s libfreecontact.so.0.0.0 libfreecontact.so.0; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libfreecontact.so.0.0.0 libfreecontact.so || { rm -f libfreecontact.so && ln -s libfreecontact.so.0.0.0 libfreecontact.so; }; }) libtool: install: /usr/bin/install -c .libs/libfreecontact.lai /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libfreecontact.la libtool: install: /usr/bin/install -c .libs/libfreecontact.a /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libfreecontact.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libfreecontact.a libtool: install: ranlib /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libfreecontact.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[3]: Leaving directory '/<>/lib' make[2]: Leaving directory '/<>/lib' Making install in src make[2]: Entering directory '/<>/src' make[3]: Entering directory '/<>/src' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/mkdir -p '/<>/debian/tmp/usr/share/doc/freecontact/examples' /bin/mkdir -p '/<>/debian/tmp/usr/share/freecontact' /bin/mkdir -p '/<>/debian/tmp/usr/share/freecontact' /bin/bash ../libtool --mode=install /usr/bin/install -c freecontact '/<>/debian/tmp/usr/bin' /usr/bin/install -c -m 644 BioXSD-1.1.xsd freecontact_input.xsd freecontact_output.xsd '/<>/debian/tmp/usr/share/freecontact' /usr/bin/install -c -m 644 demo_1000.aln demo_1000.psicov.50 PF00071_v25_999.fa PF00071_v25_999.xml PF00071_v25_999.evfold.50 PF00071_v25_999.evfold.50.xml '/<>/debian/tmp/usr/share/doc/freecontact/examples' /usr/bin/install -c a2m2aln '/<>/debian/tmp/usr/share/freecontact' /bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 freecontact.1 '/<>/debian/tmp/usr/share/man/man1' libtool: warning: '../lib/libfreecontact.la' has not been installed in '/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/freecontact /<>/debian/tmp/usr/bin/freecontact make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install d-shlibmove --commit \ --multiarch \ --exclude-la \ --devunversioned \ --override s/libblas3-dev/libblas-dev/ \ --v5 \ --override s/libgfortran3-dev/libgfortran-5-dev/ \ --override s/libquadmath0-dev/libgcc-5-dev/ \ --override s/liblapack3-dev/liblapack-dev/ \ --movedev debian/tmp/usr/include/* usr/include \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility --> libblas-dev package exists. devlibs error: There is no package matching [libgfortran4-dev] and noone provides it, please report bug to d-shlibs maintainer --> liblapack-dev package exists. debian/rules:29: recipe for target 'override_dh_install' failed make[1]: *** [override_dh_install] Error 1 make[1]: Leaving directory '/<>' debian/rules:11: recipe for target 'binary' failed make: *** [binary] Error 2 dpkg-buildpackage: error: fakeroot debian/rules binary gave error exit status 2 -------------------------------------------------------------------------------- Build finished at 20161213-0424 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Not removing build depends: as requested Keeping session: +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 96820 Build-Time: 172 Distribution: zesty Fail-Stage: build Host Architecture: amd64 Install-Time: 41 Job: freecontact_1.0.21-4build3.dsc Machine Architecture: amd64 Package: freecontact Package-Time: 214 Source-Version: 1.0.21-4build3 Space: 96820 Status: attempted Version: 1.0.21-4build3 -------------------------------------------------------------------------------- Finished at 20161213-0424 Build needed 00:03:34, 96820k disc space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-11414475'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-11414475/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-11414475'] Unmounting chroot for build PACKAGEBUILD-11414475... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-11414475'] Removing build PACKAGEBUILD-11414475