RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lgw01-amd64-058 4.4.0-96-generic #119-Ubuntu SMP Tue Sep 12 14:59:54 UTC 2017 x86_64 Buildd toolchain package versions: launchpad-buildd_152 python-lpbuildd_152 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.2 dpkg-dev_1.18.4ubuntu1.2 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 23 Sep 23:03:09 ntpdate[1792]: adjust time server 10.211.37.1 offset 0.025911 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=artful --arch=i386 PACKAGEBUILD-13434926 /home/buildd/filecache-default/b6762bcd0bec7d108ffb0fb3fb0b7d1ce32df8bb Creating target for build PACKAGEBUILD-13434926 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=artful --arch=i386 PACKAGEBUILD-13434926 Starting target for build PACKAGEBUILD-13434926 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=artful --arch=i386 PACKAGEBUILD-13434926 'deb http://ftpmaster.internal/ubuntu artful main universe' Overriding sources.list in build-PACKAGEBUILD-13434926 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=artful --arch=i386 PACKAGEBUILD-13434926 Updating target for build PACKAGEBUILD-13434926 Get:1 http://ftpmaster.internal/ubuntu artful InRelease [237 kB] Get:2 http://ftpmaster.internal/ubuntu artful/main i386 Packages [1076 kB] Get:3 http://ftpmaster.internal/ubuntu artful/main Translation-en [544 kB] Get:4 http://ftpmaster.internal/ubuntu artful/universe i386 Packages [8056 kB] Get:5 http://ftpmaster.internal/ubuntu artful/universe Translation-en [4785 kB] Fetched 14.7 MB in 3s (3782 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: build-essential 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 4752 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu artful/main i386 build-essential i386 12.4ubuntu1 [4752 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 4752 B in 0s (0 B/s) (Reading database ... 12671 files and directories currently installed.) Preparing to unpack .../build-essential_12.4ubuntu1_i386.deb ... Unpacking build-essential (12.4ubuntu1) over (12.1ubuntu2) ... Setting up build-essential (12.4ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-13434926 i386 artful -c chroot:build-PACKAGEBUILD-13434926 --arch=i386 --dist=artful --nolog hypre_2.11.1-4.dsc Initiating build PACKAGEBUILD-13434926 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-96-generic #119-Ubuntu SMP Tue Sep 12 14:59:54 UTC 2017 i686 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-058.buildd +==============================================================================+ | hypre 2.11.1-4 (i386) 23 Sep 2017 23:03 | +==============================================================================+ Package: hypre Version: 2.11.1-4 Source Version: 2.11.1-4 Distribution: artful Machine Architecture: amd64 Host Architecture: i386 Build Architecture: i386 I: NOTICE: Log filtering will replace 'build/hypre-9CsU4E/hypre-2.11.1' with '<>' I: NOTICE: Log filtering will replace 'build/hypre-9CsU4E' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-13434926/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- hypre_2.11.1-4.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-JXdMfY/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-JXdMfY/apt_archive ./ InRelease Get:2 copy:/<>/resolver-JXdMfY/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-JXdMfY/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-JXdMfY/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-JXdMfY/apt_archive ./ Packages [527 B] Fetched 2860 B in 0s (0 B/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 780 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-JXdMfY/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [780 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 780 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12671 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_i386.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: autoconf, automake, debhelper (>= 10), gfortran, libblas-dev | libblas.so, liblapack-dev | liblapack.so, libltdl-dev, libtool, mpi-default-dev Filtered Build-Depends: autoconf, automake, debhelper (>= 10), gfortran, libblas-dev | libblas.so, liblapack-dev | liblapack.so, libltdl-dev, libtool, mpi-default-dev dpkg-deb: building package 'sbuild-build-depends-hypre-dummy' in '/<>/resolver-0fcZxW/apt_archive/sbuild-build-depends-hypre-dummy.deb'. Ign:1 copy:/<>/resolver-0fcZxW/apt_archive ./ InRelease Get:2 copy:/<>/resolver-0fcZxW/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-0fcZxW/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-0fcZxW/apt_archive ./ Sources [270 B] Get:5 copy:/<>/resolver-0fcZxW/apt_archive ./ Packages [583 B] Fetched 2972 B in 0s (256 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install hypre build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base gfortran gfortran-7 groff-base intltool-debian libarchive-zip-perl libblas-dev libblas3 libbsd0 libcroco3 libfabric1 libfile-stripnondeterminism-perl libgfortran-7-dev libgfortran4 libglib2.0-0 libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu57 liblapack-dev liblapack3 libltdl-dev libltdl7 libmagic-mgc libmagic1 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenmpi-dev libopenmpi2 libpciaccess0 libpipeline1 libpsm-infinipath1 librdmacm1 libsigsegv2 libtimedate-perl libtool libxml2 m4 man-db mpi-default-dev ocl-icd-libopencl1 openmpi-common po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-7-multilib gfortran-7-doc libgfortran4-dbg libcoarrays-dev groff liblapack-doc libhwloc-contrib-plugins libtool-doc openmpi-doc pciutils gcj-jdk m4-doc less www-browser opencl-icd libmail-box-perl Recommended packages: curl | wget | lynx-cur libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs openmpi-bin xml-core libmail-sendmail-perl The following packages will be REMOVED: pkg-create-dbgsym* The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base gfortran gfortran-7 groff-base intltool-debian libarchive-zip-perl libblas-dev libblas3 libbsd0 libcroco3 libfabric1 libfile-stripnondeterminism-perl libgfortran-7-dev libgfortran4 libglib2.0-0 libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu57 liblapack-dev liblapack3 libltdl-dev libltdl7 libmagic-mgc libmagic1 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenmpi-dev libopenmpi2 libpciaccess0 libpipeline1 libpsm-infinipath1 librdmacm1 libsigsegv2 libtimedate-perl libtool libxml2 m4 man-db mpi-default-dev ocl-icd-libopencl1 openmpi-common po-debconf sbuild-build-depends-hypre-dummy 0 upgraded, 58 newly installed, 1 to remove and 0 not upgraded. Need to get 33.7 MB of archives. After this operation, 129 MB of additional disk space will be used. Get:1 copy:/<>/resolver-0fcZxW/apt_archive ./ sbuild-build-depends-hypre-dummy 0.invalid.0 [842 B] Get:2 http://ftpmaster.internal/ubuntu artful/main i386 groff-base i386 1.22.3-9 [1163 kB] Get:3 http://ftpmaster.internal/ubuntu artful/main i386 libbsd0 i386 0.8.6-1 [45.1 kB] Get:4 http://ftpmaster.internal/ubuntu artful/main i386 bsdmainutils i386 9.0.12+nmu1ubuntu1 [181 kB] Get:5 http://ftpmaster.internal/ubuntu artful/main i386 libpipeline1 i386 1.4.2-1 [26.8 kB] Get:6 http://ftpmaster.internal/ubuntu artful/main i386 man-db i386 2.7.6.1-2 [906 kB] Get:7 http://ftpmaster.internal/ubuntu artful/main i386 libmagic-mgc i386 1:5.32-1 [184 kB] Get:8 http://ftpmaster.internal/ubuntu artful/main i386 libmagic1 i386 1:5.32-1 [75.0 kB] Get:9 http://ftpmaster.internal/ubuntu artful/main i386 file i386 1:5.32-1 [21.9 kB] Get:10 http://ftpmaster.internal/ubuntu artful/main i386 gettext-base i386 0.19.8.1-4ubuntu1 [50.7 kB] Get:11 http://ftpmaster.internal/ubuntu artful/main i386 libglib2.0-0 i386 2.54.0-1ubuntu1 [1231 kB] Get:12 http://ftpmaster.internal/ubuntu artful/main i386 libicu57 i386 57.1-6 [7837 kB] Get:13 http://ftpmaster.internal/ubuntu artful/main i386 libnuma1 i386 2.0.11-2.1 [23.2 kB] Get:14 http://ftpmaster.internal/ubuntu artful/main i386 libxml2 i386 2.9.4+dfsg1-3.1 [705 kB] Get:15 http://ftpmaster.internal/ubuntu artful/main i386 libsigsegv2 i386 2.11-1 [13.5 kB] Get:16 http://ftpmaster.internal/ubuntu artful/main i386 m4 i386 1.4.18-1 [196 kB] Get:17 http://ftpmaster.internal/ubuntu artful/main i386 autoconf all 2.69-11 [322 kB] Get:18 http://ftpmaster.internal/ubuntu artful/main i386 autotools-dev all 20161112.1 [39.5 kB] Get:19 http://ftpmaster.internal/ubuntu artful/main i386 automake all 1:1.15-6ubuntu1 [509 kB] Get:20 http://ftpmaster.internal/ubuntu artful/main i386 autopoint all 0.19.8.1-4ubuntu1 [412 kB] Get:21 http://ftpmaster.internal/ubuntu artful/main i386 libtool all 2.4.6-2 [194 kB] Get:22 http://ftpmaster.internal/ubuntu artful/main i386 dh-autoreconf all 14 [15.5 kB] Get:23 http://ftpmaster.internal/ubuntu artful/main i386 libarchive-zip-perl all 1.59-1 [84.0 kB] Get:24 http://ftpmaster.internal/ubuntu artful/main i386 libfile-stripnondeterminism-perl all 0.038-1 [13.3 kB] Get:25 http://ftpmaster.internal/ubuntu artful/main i386 libtimedate-perl all 2.3000-2 [37.5 kB] Get:26 http://ftpmaster.internal/ubuntu artful/main i386 dh-strip-nondeterminism all 0.038-1 [5026 B] Get:27 http://ftpmaster.internal/ubuntu artful/main i386 libcroco3 i386 0.6.12-1 [87.5 kB] Get:28 http://ftpmaster.internal/ubuntu artful/main i386 gettext i386 0.19.8.1-4ubuntu1 [1097 kB] Get:29 http://ftpmaster.internal/ubuntu artful/main i386 intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:30 http://ftpmaster.internal/ubuntu artful/main i386 po-debconf all 1.0.20 [232 kB] Get:31 http://ftpmaster.internal/ubuntu artful/main i386 debhelper all 10.7.2ubuntu2 [877 kB] Get:32 http://ftpmaster.internal/ubuntu artful/main i386 libgfortran4 i386 7.2.0-6ubuntu1 [468 kB] Get:33 http://ftpmaster.internal/ubuntu artful/main i386 libgfortran-7-dev i386 7.2.0-6ubuntu1 [522 kB] Get:34 http://ftpmaster.internal/ubuntu artful/main i386 gfortran-7 i386 7.2.0-6ubuntu1 [7345 kB] Get:35 http://ftpmaster.internal/ubuntu artful/main i386 gfortran i386 4:7.2.0-1ubuntu1 [1280 B] Get:36 http://ftpmaster.internal/ubuntu artful/main i386 libblas3 i386 3.7.1-3ubuntu2 [124 kB] Get:37 http://ftpmaster.internal/ubuntu artful/main i386 libblas-dev i386 3.7.1-3ubuntu2 [129 kB] Get:38 http://ftpmaster.internal/ubuntu artful/main i386 libnl-3-200 i386 3.2.29-0ubuntu3 [55.9 kB] Get:39 http://ftpmaster.internal/ubuntu artful/main i386 libnl-route-3-200 i386 3.2.29-0ubuntu3 [154 kB] Get:40 http://ftpmaster.internal/ubuntu artful/main i386 libibverbs1 i386 1.2.1-2ubuntu1 [33.5 kB] Get:41 http://ftpmaster.internal/ubuntu artful/universe i386 libpsm-infinipath1 i386 3.3+19.g67c0807.open-3 [180 kB] Get:42 http://ftpmaster.internal/ubuntu artful/main i386 librdmacm1 i386 1.1.0-2 [53.1 kB] Get:43 http://ftpmaster.internal/ubuntu artful/universe i386 libfabric1 i386 1.4.0-1 [289 kB] Get:44 http://ftpmaster.internal/ubuntu artful/main i386 liblapack3 i386 3.7.1-3ubuntu2 [1917 kB] Get:45 http://ftpmaster.internal/ubuntu artful/main i386 liblapack-dev i386 3.7.1-3ubuntu2 [1975 kB] Get:46 http://ftpmaster.internal/ubuntu artful/main i386 libltdl7 i386 2.4.6-2 [40.5 kB] Get:47 http://ftpmaster.internal/ubuntu artful/main i386 libltdl-dev i386 2.4.6-2 [163 kB] Get:48 http://ftpmaster.internal/ubuntu artful/main i386 libpciaccess0 i386 0.13.4-1ubuntu1 [20.2 kB] Get:49 http://ftpmaster.internal/ubuntu artful/universe i386 openmpi-common all 2.1.1-6 [140 kB] Get:50 http://ftpmaster.internal/ubuntu artful/universe i386 libhwloc5 i386 1.11.5-1 [111 kB] Get:51 http://ftpmaster.internal/ubuntu artful/main i386 libnuma-dev i386 2.0.11-2.1 [34.3 kB] Get:52 http://ftpmaster.internal/ubuntu artful/universe i386 libhwloc-dev i386 1.11.5-1 [162 kB] Get:53 http://ftpmaster.internal/ubuntu artful/main i386 ocl-icd-libopencl1 i386 2.2.11-1ubuntu1 [31.3 kB] Get:54 http://ftpmaster.internal/ubuntu artful/universe i386 libhwloc-plugins i386 1.11.5-1 [12.9 kB] Get:55 http://ftpmaster.internal/ubuntu artful/main i386 libibverbs-dev i386 1.2.1-2ubuntu1 [101 kB] Get:56 http://ftpmaster.internal/ubuntu artful/universe i386 libopenmpi2 i386 2.1.1-6 [2119 kB] Get:57 http://ftpmaster.internal/ubuntu artful/universe i386 libopenmpi-dev i386 2.1.1-6 [915 kB] Get:58 http://ftpmaster.internal/ubuntu artful/universe i386 mpi-default-dev i386 1.8 [3716 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 33.7 MB in 1s (33.2 MB/s) (Reading database ... 12671 files and directories currently installed.) Removing pkg-create-dbgsym (0.73) ... Selecting previously unselected package groff-base. (Reading database ... 12662 files and directories currently installed.) Preparing to unpack .../00-groff-base_1.22.3-9_i386.deb ... Unpacking groff-base (1.22.3-9) ... Selecting previously unselected package libbsd0:i386. Preparing to unpack .../01-libbsd0_0.8.6-1_i386.deb ... Unpacking libbsd0:i386 (0.8.6-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../02-bsdmainutils_9.0.12+nmu1ubuntu1_i386.deb ... Unpacking bsdmainutils (9.0.12+nmu1ubuntu1) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../03-libpipeline1_1.4.2-1_i386.deb ... Unpacking libpipeline1:i386 (1.4.2-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.7.6.1-2_i386.deb ... Unpacking man-db (2.7.6.1-2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../05-libmagic-mgc_1%3a5.32-1_i386.deb ... Unpacking libmagic-mgc (1:5.32-1) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../06-libmagic1_1%3a5.32-1_i386.deb ... Unpacking libmagic1:i386 (1:5.32-1) ... Selecting previously unselected package file. Preparing to unpack .../07-file_1%3a5.32-1_i386.deb ... Unpacking file (1:5.32-1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../08-gettext-base_0.19.8.1-4ubuntu1_i386.deb ... Unpacking gettext-base (0.19.8.1-4ubuntu1) ... Selecting previously unselected package libglib2.0-0:i386. Preparing to unpack .../09-libglib2.0-0_2.54.0-1ubuntu1_i386.deb ... Unpacking libglib2.0-0:i386 (2.54.0-1ubuntu1) ... Selecting previously unselected package libicu57:i386. Preparing to unpack .../10-libicu57_57.1-6_i386.deb ... Unpacking libicu57:i386 (57.1-6) ... Selecting previously unselected package libnuma1:i386. Preparing to unpack .../11-libnuma1_2.0.11-2.1_i386.deb ... Unpacking libnuma1:i386 (2.0.11-2.1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../12-libxml2_2.9.4+dfsg1-3.1_i386.deb ... Unpacking libxml2:i386 (2.9.4+dfsg1-3.1) ... Selecting previously unselected package libsigsegv2:i386. Preparing to unpack .../13-libsigsegv2_2.11-1_i386.deb ... Unpacking libsigsegv2:i386 (2.11-1) ... Selecting previously unselected package m4. Preparing to unpack .../14-m4_1.4.18-1_i386.deb ... Unpacking m4 (1.4.18-1) ... Selecting previously unselected package autoconf. Preparing to unpack .../15-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../16-autotools-dev_20161112.1_all.deb ... Unpacking autotools-dev (20161112.1) ... Selecting previously unselected package automake. Preparing to unpack .../17-automake_1%3a1.15-6ubuntu1_all.deb ... Unpacking automake (1:1.15-6ubuntu1) ... Selecting previously unselected package autopoint. Preparing to unpack .../18-autopoint_0.19.8.1-4ubuntu1_all.deb ... Unpacking autopoint (0.19.8.1-4ubuntu1) ... Selecting previously unselected package libtool. Preparing to unpack .../19-libtool_2.4.6-2_all.deb ... Unpacking libtool (2.4.6-2) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../20-dh-autoreconf_14_all.deb ... Unpacking dh-autoreconf (14) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../21-libarchive-zip-perl_1.59-1_all.deb ... Unpacking libarchive-zip-perl (1.59-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../22-libfile-stripnondeterminism-perl_0.038-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (0.038-1) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../23-libtimedate-perl_2.3000-2_all.deb ... Unpacking libtimedate-perl (2.3000-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../24-dh-strip-nondeterminism_0.038-1_all.deb ... Unpacking dh-strip-nondeterminism (0.038-1) ... Selecting previously unselected package libcroco3:i386. Preparing to unpack .../25-libcroco3_0.6.12-1_i386.deb ... Unpacking libcroco3:i386 (0.6.12-1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.19.8.1-4ubuntu1_i386.deb ... Unpacking gettext (0.19.8.1-4ubuntu1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.4_all.deb ... Unpacking intltool-debian (0.35.0+20060710.4) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.20_all.deb ... Unpacking po-debconf (1.0.20) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_10.7.2ubuntu2_all.deb ... Unpacking debhelper (10.7.2ubuntu2) ... Selecting previously unselected package libgfortran4:i386. Preparing to unpack .../30-libgfortran4_7.2.0-6ubuntu1_i386.deb ... Unpacking libgfortran4:i386 (7.2.0-6ubuntu1) ... Selecting previously unselected package libgfortran-7-dev:i386. Preparing to unpack .../31-libgfortran-7-dev_7.2.0-6ubuntu1_i386.deb ... Unpacking libgfortran-7-dev:i386 (7.2.0-6ubuntu1) ... Selecting previously unselected package gfortran-7. Preparing to unpack .../32-gfortran-7_7.2.0-6ubuntu1_i386.deb ... Unpacking gfortran-7 (7.2.0-6ubuntu1) ... Selecting previously unselected package gfortran. Preparing to unpack .../33-gfortran_4%3a7.2.0-1ubuntu1_i386.deb ... Unpacking gfortran (4:7.2.0-1ubuntu1) ... Selecting previously unselected package libblas3:i386. Preparing to unpack .../34-libblas3_3.7.1-3ubuntu2_i386.deb ... Unpacking libblas3:i386 (3.7.1-3ubuntu2) ... Selecting previously unselected package libblas-dev:i386. Preparing to unpack .../35-libblas-dev_3.7.1-3ubuntu2_i386.deb ... Unpacking libblas-dev:i386 (3.7.1-3ubuntu2) ... Selecting previously unselected package libnl-3-200:i386. Preparing to unpack .../36-libnl-3-200_3.2.29-0ubuntu3_i386.deb ... Unpacking libnl-3-200:i386 (3.2.29-0ubuntu3) ... Selecting previously unselected package libnl-route-3-200:i386. Preparing to unpack .../37-libnl-route-3-200_3.2.29-0ubuntu3_i386.deb ... Unpacking libnl-route-3-200:i386 (3.2.29-0ubuntu3) ... Selecting previously unselected package libibverbs1. Preparing to unpack .../38-libibverbs1_1.2.1-2ubuntu1_i386.deb ... Unpacking libibverbs1 (1.2.1-2ubuntu1) ... Selecting previously unselected package libpsm-infinipath1. Preparing to unpack .../39-libpsm-infinipath1_3.3+19.g67c0807.open-3_i386.deb ... Unpacking libpsm-infinipath1 (3.3+19.g67c0807.open-3) ... Selecting previously unselected package librdmacm1. Preparing to unpack .../40-librdmacm1_1.1.0-2_i386.deb ... Unpacking librdmacm1 (1.1.0-2) ... Selecting previously unselected package libfabric1. Preparing to unpack .../41-libfabric1_1.4.0-1_i386.deb ... Unpacking libfabric1 (1.4.0-1) ... Selecting previously unselected package liblapack3:i386. Preparing to unpack .../42-liblapack3_3.7.1-3ubuntu2_i386.deb ... Unpacking liblapack3:i386 (3.7.1-3ubuntu2) ... Selecting previously unselected package liblapack-dev:i386. Preparing to unpack .../43-liblapack-dev_3.7.1-3ubuntu2_i386.deb ... Unpacking liblapack-dev:i386 (3.7.1-3ubuntu2) ... Selecting previously unselected package libltdl7:i386. Preparing to unpack .../44-libltdl7_2.4.6-2_i386.deb ... Unpacking libltdl7:i386 (2.4.6-2) ... Selecting previously unselected package libltdl-dev:i386. Preparing to unpack .../45-libltdl-dev_2.4.6-2_i386.deb ... Unpacking libltdl-dev:i386 (2.4.6-2) ... Selecting previously unselected package libpciaccess0:i386. Preparing to unpack .../46-libpciaccess0_0.13.4-1ubuntu1_i386.deb ... Unpacking libpciaccess0:i386 (0.13.4-1ubuntu1) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../47-openmpi-common_2.1.1-6_all.deb ... Unpacking openmpi-common (2.1.1-6) ... Selecting previously unselected package libhwloc5:i386. Preparing to unpack .../48-libhwloc5_1.11.5-1_i386.deb ... Unpacking libhwloc5:i386 (1.11.5-1) ... Selecting previously unselected package libnuma-dev:i386. Preparing to unpack .../49-libnuma-dev_2.0.11-2.1_i386.deb ... Unpacking libnuma-dev:i386 (2.0.11-2.1) ... Selecting previously unselected package libhwloc-dev:i386. Preparing to unpack .../50-libhwloc-dev_1.11.5-1_i386.deb ... Unpacking libhwloc-dev:i386 (1.11.5-1) ... Selecting previously unselected package ocl-icd-libopencl1:i386. Preparing to unpack .../51-ocl-icd-libopencl1_2.2.11-1ubuntu1_i386.deb ... Unpacking ocl-icd-libopencl1:i386 (2.2.11-1ubuntu1) ... Selecting previously unselected package libhwloc-plugins. Preparing to unpack .../52-libhwloc-plugins_1.11.5-1_i386.deb ... Unpacking libhwloc-plugins (1.11.5-1) ... Selecting previously unselected package libibverbs-dev. Preparing to unpack .../53-libibverbs-dev_1.2.1-2ubuntu1_i386.deb ... Unpacking libibverbs-dev (1.2.1-2ubuntu1) ... Selecting previously unselected package libopenmpi2:i386. Preparing to unpack .../54-libopenmpi2_2.1.1-6_i386.deb ... Unpacking libopenmpi2:i386 (2.1.1-6) ... Selecting previously unselected package libopenmpi-dev. Preparing to unpack .../55-libopenmpi-dev_2.1.1-6_i386.deb ... Unpacking libopenmpi-dev (2.1.1-6) ... Selecting previously unselected package mpi-default-dev. Preparing to unpack .../56-mpi-default-dev_1.8_i386.deb ... Unpacking mpi-default-dev (1.8) ... Selecting previously unselected package sbuild-build-depends-hypre-dummy. Preparing to unpack .../57-sbuild-build-depends-hypre-dummy_0.invalid.0_i386.deb ... Unpacking sbuild-build-depends-hypre-dummy (0.invalid.0) ... Setting up libarchive-zip-perl (1.59-1) ... Setting up libgfortran4:i386 (7.2.0-6ubuntu1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsigsegv2:i386 (2.11-1) ... Setting up libnuma1:i386 (2.0.11-2.1) ... Setting up groff-base (1.22.3-9) ... Setting up libglib2.0-0:i386 (2.54.0-1ubuntu1) ... No schema files found: doing nothing. Setting up gettext-base (0.19.8.1-4ubuntu1) ... Setting up libpipeline1:i386 (1.4.2-1) ... Setting up m4 (1.4.18-1) ... Setting up libicu57:i386 (57.1-6) ... Setting up libbsd0:i386 (0.8.6-1) ... Setting up libxml2:i386 (2.9.4+dfsg1-3.1) ... Setting up libmagic-mgc (1:5.32-1) ... Setting up libmagic1:i386 (1:5.32-1) ... Setting up libcroco3:i386 (0.6.12-1) ... Setting up libpsm-infinipath1 (3.3+19.g67c0807.open-3) ... Setting up libblas3:i386 (3.7.1-3ubuntu2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up openmpi-common (2.1.1-6) ... Processing triggers for libc-bin (2.26-0ubuntu1) ... Setting up autotools-dev (20161112.1) ... Setting up libltdl7:i386 (2.4.6-2) ... Setting up libgfortran-7-dev:i386 (7.2.0-6ubuntu1) ... Setting up libpciaccess0:i386 (0.13.4-1ubuntu1) ... Setting up gfortran-7 (7.2.0-6ubuntu1) ... Setting up libnuma-dev:i386 (2.0.11-2.1) ... Setting up ocl-icd-libopencl1:i386 (2.2.11-1ubuntu1) ... Setting up bsdmainutils (9.0.12+nmu1ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libnl-3-200:i386 (3.2.29-0ubuntu3) ... Setting up autopoint (0.19.8.1-4ubuntu1) ... Setting up libfile-stripnondeterminism-perl (0.038-1) ... Setting up gfortran (4:7.2.0-1ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libltdl-dev:i386 (2.4.6-2) ... Setting up gettext (0.19.8.1-4ubuntu1) ... Setting up libblas-dev:i386 (3.7.1-3ubuntu2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so to provide /usr/lib/i386-linux-gnu/libblas.so (libblas.so-i386-linux-gnu) in auto mode Setting up liblapack3:i386 (3.7.1-3ubuntu2) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up libnl-route-3-200:i386 (3.2.29-0ubuntu3) ... Setting up autoconf (2.69-11) ... Setting up file (1:5.32-1) ... Setting up libhwloc5:i386 (1.11.5-1) ... Setting up libhwloc-plugins (1.11.5-1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up automake (1:1.15-6ubuntu1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.7.6.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up liblapack-dev:i386 (3.7.1-3ubuntu2) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode Setting up libtool (2.4.6-2) ... Setting up libibverbs1 (1.2.1-2ubuntu1) ... Setting up po-debconf (1.0.20) ... Setting up libhwloc-dev:i386 (1.11.5-1) ... Setting up librdmacm1 (1.1.0-2) ... Setting up libibverbs-dev (1.2.1-2ubuntu1) ... Setting up libfabric1 (1.4.0-1) ... Setting up libopenmpi2:i386 (2.1.1-6) ... Setting up libopenmpi-dev (2.1.1-6) ... update-alternatives: using /usr/lib/i386-linux-gnu/openmpi/include to provide /usr/include/mpi (mpi) in auto mode Setting up mpi-default-dev (1.8) ... Setting up dh-autoreconf (14) ... Setting up dh-strip-nondeterminism (0.038-1) ... Setting up debhelper (10.7.2ubuntu2) ... Setting up sbuild-build-depends-hypre-dummy (0.invalid.0) ... (Reading database ... 16005 files and directories currently installed.) Purging configuration files for pkg-create-dbgsym (0.73) ... Processing triggers for libc-bin (2.26-0ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-96-generic amd64 (i686) Toolchain package versions: binutils_2.29.1-1ubuntu1 dpkg-dev_1.18.24ubuntu1 g++-7_7.2.0-6ubuntu1 gcc-7_7.2.0-6ubuntu1 libc6-dev_2.26-0ubuntu1 libstdc++-7-dev_7.2.0-6ubuntu1 libstdc++6_7.2.0-6ubuntu1 linux-libc-dev_4.13.0-11.12 Package versions: adduser_3.113+nmu3ubuntu5 advancecomp_2.0-1 apt_1.5~rc4 apt-transport-https_1.5~rc4 autoconf_2.69-11 automake_1:1.15-6ubuntu1 autopoint_0.19.8.1-4ubuntu1 autotools-dev_20161112.1 base-files_9.6ubuntu101 base-passwd_3.5.43 bash_4.4-5ubuntu1 binutils_2.29.1-1ubuntu1 binutils-common_2.29.1-1ubuntu1 binutils-i686-linux-gnu_2.29.1-1ubuntu1 bsdmainutils_9.0.12+nmu1ubuntu1 bsdutils_1:2.30.1-0ubuntu4 build-essential_12.4ubuntu1 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.26-3ubuntu3 cpp_4:7.2.0-1ubuntu1 cpp-7_7.2.0-6ubuntu1 dash_0.5.8-2.3ubuntu1 debconf_1.5.63 debhelper_10.7.2ubuntu2 debianutils_4.8.2 dh-autoreconf_14 dh-strip-nondeterminism_0.038-1 diffutils_1:3.6-1 dmsetup_2:1.02.137-2ubuntu3 dpkg_1.18.24ubuntu1 dpkg-dev_1.18.24ubuntu1 e2fslibs_1.43.5-1 e2fsprogs_1.43.5-1 fakeroot_1.21-1ubuntu2 fdisk_2.30.1-0ubuntu4 file_1:5.32-1 findutils_4.6.0+git+20170729-2 g++_4:7.2.0-1ubuntu1 g++-7_7.2.0-6ubuntu1 gcc_4:7.2.0-1ubuntu1 gcc-7_7.2.0-6ubuntu1 gcc-7-base_7.2.0-6ubuntu1 gettext_0.19.8.1-4ubuntu1 gettext-base_0.19.8.1-4ubuntu1 gfortran_4:7.2.0-1ubuntu1 gfortran-7_7.2.0-6ubuntu1 gnupg_2.1.15-1ubuntu7 gnupg-agent_2.1.15-1ubuntu7 gpgv_2.1.15-1ubuntu7 grep_3.1-2 groff-base_1.22.3-9 gzip_1.6-5ubuntu1 hostname_3.18 init_1.49ubuntu1 init-system-helpers_1.49ubuntu1 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libapparmor1_2.11.0-2ubuntu17 libapt-pkg5.0_1.5~rc4 libarchive-zip-perl_1.59-1 libasan4_7.2.0-6ubuntu1 libasn1-8-heimdal_7.4.0.dfsg.1-2 libassuan0_2.4.3-3 libatomic1_7.2.0-6ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.7.7-1ubuntu2 libaudit1_1:2.7.7-1ubuntu2 libbinutils_2.29.1-1ubuntu1 libblas-dev_3.7.1-3ubuntu2 libblas3_3.7.1-3ubuntu2 libblkid1_2.30.1-0ubuntu4 libbsd0_0.8.6-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.26-0ubuntu1 libc-dev-bin_2.26-0ubuntu1 libc6_2.26-0ubuntu1 libc6-dev_2.26-0ubuntu1 libcap-ng0_0.7.7-3build1 libcap2_1:2.25-1 libcc1-0_7.2.0-6ubuntu1 libcilkrts5_7.2.0-6ubuntu1 libcomerr2_1.43.5-1 libcroco3_0.6.12-1 libcryptsetup4_2:1.7.3-4ubuntu1 libcurl3-gnutls_7.55.1-1ubuntu1 libdb5.3_5.3.28-13.1 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.137-2ubuntu3 libdpkg-perl_1.18.24ubuntu1 libfabric1_1.4.0-1 libfakeroot_1.21-1ubuntu2 libfdisk1_2.30.1-0ubuntu4 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.038-1 libgcc-7-dev_7.2.0-6ubuntu1 libgcc1_1:7.2.0-6ubuntu1 libgcrypt20_1.7.8-2ubuntu1 libgdbm3_1.8.3-14 libgfortran-7-dev_7.2.0-6ubuntu1 libgfortran4_7.2.0-6ubuntu1 libglib2.0-0_2.54.0-1ubuntu1 libgmp10_2:6.1.2+dfsg-1 libgnutls30_3.5.8-6ubuntu3 libgomp1_7.2.0-6ubuntu1 libgpg-error0_1.27-3 libgssapi-krb5-2_1.15.1-2 libgssapi3-heimdal_7.4.0.dfsg.1-2 libhcrypto4-heimdal_7.4.0.dfsg.1-2 libheimbase1-heimdal_7.4.0.dfsg.1-2 libheimntlm0-heimdal_7.4.0.dfsg.1-2 libhogweed4_3.3-1 libhwloc-dev_1.11.5-1 libhwloc-plugins_1.11.5-1 libhwloc5_1.11.5-1 libhx509-5-heimdal_7.4.0.dfsg.1-2 libibverbs-dev_1.2.1-2ubuntu1 libibverbs1_1.2.1-2ubuntu1 libicu57_57.1-6 libidn11_1.33-2 libidn2-0_2.0.2-5 libip4tc0_1.6.1-2ubuntu1 libisl15_0.18-1 libitm1_7.2.0-6ubuntu1 libk5crypto3_1.15.1-2 libkeyutils1_1.5.9-9ubuntu1 libkmod2_24-1ubuntu2 libkrb5-26-heimdal_7.4.0.dfsg.1-2 libkrb5-3_1.15.1-2 libkrb5support0_1.15.1-2 libksba8_1.3.5-2 liblapack-dev_3.7.1-3ubuntu2 liblapack3_3.7.1-3ubuntu2 libldap-2.4-2_2.4.45+dfsg-1ubuntu1 libldap-common_2.4.45+dfsg-1ubuntu1 liblockfile-bin_1.14-1 liblockfile1_1.14-1 libltdl-dev_2.4.6-2 libltdl7_2.4.6-2 liblz4-1_0.0~r131-2ubuntu2 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.32-1 libmagic1_1:5.32-1 libmount1_2.30.1-0ubuntu4 libmpc3_1.0.3-2 libmpfr4_3.1.6-1 libmpx2_7.2.0-6ubuntu1 libncurses5_6.0+20160625-1ubuntu1 libncursesw5_6.0+20160625-1ubuntu1 libnettle6_3.3-1 libnl-3-200_3.2.29-0ubuntu3 libnl-route-3-200_3.2.29-0ubuntu3 libnpth0_1.5-2 libnuma-dev_2.0.11-2.1 libnuma1_2.0.11-2.1 libopenmpi-dev_2.1.1-6 libopenmpi2_2.1.1-6 libp11-kit0_0.23.7-3 libpam-modules_1.1.8-3.2ubuntu3 libpam-modules-bin_1.1.8-3.2ubuntu3 libpam-runtime_1.1.8-3.2ubuntu3 libpam0g_1.1.8-3.2ubuntu3 libpciaccess0_0.13.4-1ubuntu1 libpcre3_2:8.39-4 libperl5.26_5.26.0-8ubuntu1 libpipeline1_1.4.2-1 libpng16-16_1.6.32-2 libprocps6_2:3.3.12-1ubuntu2 libpsl5_0.18.0-2 libpsm-infinipath1_3.3+19.g67c0807.open-3 libquadmath0_7.2.0-6ubuntu1 librdmacm1_1.1.0-2 libreadline7_7.0-0ubuntu2 libroken18-heimdal_7.4.0.dfsg.1-2 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-3ubuntu1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3ubuntu1 libseccomp2_2.3.1-2.1ubuntu2 libselinux1_2.7-1 libsemanage-common_2.7-1 libsemanage1_2.7-1 libsepol1_2.7-1 libsigsegv2_2.11-1 libslang2_2.3.1-5ubuntu1 libsmartcols1_2.30.1-0ubuntu4 libsqlite3-0_3.19.3-3 libss2_1.43.5-1 libssl1.0.0_1.0.2g-1ubuntu13 libstdc++-7-dev_7.2.0-6ubuntu1 libstdc++6_7.2.0-6ubuntu1 libsystemd0_234-2ubuntu10 libtasn1-6_4.12-2.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160625-1ubuntu1 libtool_2.4.6-2 libubsan0_7.2.0-6ubuntu1 libudev1_234-2ubuntu10 libunistring0_0.9.3-5.2ubuntu1 libusb-0.1-4_2:0.1.12-31 libustr-1.0-1_1.0.4-6 libuuid1_2.30.1-0ubuntu4 libwind0-heimdal_7.4.0.dfsg.1-2 libxml2_2.9.4+dfsg1-3.1 linux-libc-dev_4.13.0-11.12 lockfile-progs_0.1.17build1 login_1:4.2-3.2ubuntu4 lsb-base_9.20160110ubuntu5 m4_1.4.18-1 make_4.1-9.1 man-db_2.7.6.1-2 mawk_1.3.3-17ubuntu2 mount_2.30.1-0ubuntu4 mpi-default-dev_1.8 multiarch-support_2.26-0ubuntu1 ncurses-base_6.0+20160625-1ubuntu1 ncurses-bin_6.0+20160625-1ubuntu1 ocl-icd-libopencl1_2.2.11-1ubuntu1 openmpi-common_2.1.1-6 openssl_1.0.2g-1ubuntu13 optipng_0.7.6-1build1 passwd_1:4.2-3.2ubuntu4 patch_2.7.5-1build1 perl_5.26.0-8ubuntu1 perl-base_5.26.0-8ubuntu1 perl-modules-5.26_5.26.0-8ubuntu1 pinentry-curses_1.0.0-2 pkgbinarymangler_131 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.12-1ubuntu2 readline-common_7.0-0ubuntu2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-hypre-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.10 systemd_234-2ubuntu10 systemd-sysv_234-2ubuntu10 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.8git1 tar_1.29b-2 tzdata_2017b-2 ubuntu-keyring_2016.10.27 util-linux_2.30.1-0ubuntu4 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Aug 1 06:32:13 2017 UTC gpgv: using RSA key gpgv: issuer "dparsons@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./hypre_2.11.1-4.dsc dpkg-source: info: extracting hypre in hypre-2.11.1 dpkg-source: info: unpacking hypre_2.11.1.orig.tar.gz dpkg-source: info: unpacking hypre_2.11.1-4.debian.tar.xz dpkg-source: info: applying configure.patch dpkg-source: info: applying install.patch dpkg-source: info: applying blas.patch dpkg-source: info: applying complex.patch dpkg-source: info: applying shlibs-interlink-libHYPRE.so.patch dpkg-source: info: applying test.patch dpkg-source: info: applying lapack.patch dpkg-source: info: applying superlu_internal.patch dpkg-source: info: applying shlibs-interlink-sublibs.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-13434926 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-13434926 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-13434926 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package hypre dpkg-buildpackage: info: source version 2.11.1-4 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build hypre-2.11.1 dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --sourcedirectory=src --with autoreconf debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' echo "Running clean" Running clean rm -rf /<>/debian/tmp rm -f src/configure.in rm -f src/config.log rm -f src/config/config.guess rm -f src/config/config.sub dh_auto_clean make -j4 distclean make[2]: Entering directory '/<>/src' Makefile:15: config/Makefile.config: No such file or directory make[2]: *** No rule to make target 'config/Makefile.config'. Stop. make[2]: Leaving directory '/<>/src' dh_auto_clean: make -j4 distclean returned exit code 2 debian/rules:65: recipe for target 'override_dh_auto_clean' failed make[1]: [override_dh_auto_clean] Error 2 (ignored) make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--sourcedirectory=src dh_clean -O--sourcedirectory=src debian/rules build-arch dh build-arch --sourcedirectory=src --with autoreconf dh_update_autotools_config -a -O--sourcedirectory=src debian/rules override_dh_autoreconf make[1]: Entering directory '/<>' cp /usr/share/misc/config.* src/config/ cd src && ./config/bootstrap make[1]: Leaving directory '/<>' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- --with-fei --with-mli --with-superlu --with-blas --with-lapack-libs="lapack" --with-lapack-lib-dirs="/usr/lib/lapack" --with-fmangle-lapack="one-underscore" --prefix=/<>/debian/tmp/usr --enable-shared ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --libexecdir=\${prefix}/lib/i386-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --with-fei --with-mli --with-superlu --with-blas --with-lapack-libs=lapack --with-lapack-lib-dirs=/usr/lib/lapack --with-fmangle-lapack=one-underscore --prefix=/<>/debian/tmp/usr --enable-shared configure: WARNING: unrecognized options: --disable-silent-rules, --disable-maintainer-mode, --disable-dependency-tracking checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking target system type... i686-pc-linux-gnu checking for mpxlc... no checking for mpixlc... no checking for mpiicc... no checking for mpicc... mpicc checking for mpxlC... no checking for mpixlcxx... no checking for mpiicpc... no checking for mpiCC... mpiCC checking for mpxlf... no checking for mpixlf77... no checking for mpiifort... no checking for mpif77... mpif77 checking whether make sets $(MAKE)... yes checking for ranlib... ranlib checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking whether we are using the GNU C++ compiler... yes checking whether mpiCC accepts -g... yes checking whether we are using the GNU Fortran compiler... yes checking whether mpif77 accepts -g... yes checking how to get verbose linking output from mpif77... -v checking for Fortran libraries of mpif77... -L/usr//lib -L/usr/lib/i386-linux-gnu/openmpi/lib -L/usr/lib/gcc/i686-linux-gnu/7 -L/usr/lib/gcc/i686-linux-gnu/7/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/7/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/7/../../.. -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking for MPI_Init... yes checking for mpi.h... yes checking for MPI_Comm_f2c... yes checking how to run the C preprocessor... mpicc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking whether MPI_Comm_f2c is a macro... no checking for dgemm_ in -lblas... yes checking for dgemm_ in -lessl... no checking for dgemm_ in -ldxml... no checking for dgemm_ in -lcxml... no checking for dgemm_ in -lmkl... no checking for dgemm_ in -lscs... no checking for dgemm_ in -latlas... no checking for dgemm_ in -lcomplib.sgimath... no checking for dgemm_ in -lsunmath... no checking for __gxx_personality_v0 in -lstdc++... yes checking for cabs in -lm... yes configure: creating ./config.status config.status: creating config/Makefile.config config.status: creating HYPRE_config.h configure: WARNING: unrecognized options: --disable-silent-rules, --disable-maintainer-mode, --disable-dependency-tracking #dh_auto_configure -p libhypre-complex -- --with-fei --with-mli --with-superlu --with-blas --with-lapack-libs="lapack" --with-lapack-lib-dirs="/usr/lib/lapack" --with-fmangle-lapack="one-underscore" --prefix=/<>/debian/tmp/usr --enable-shared --enable-complex make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build make[1]: Entering directory '/<>' echo "Building shared libs" Building shared libs dh_auto_build make -j4 make[2]: Entering directory '/<>/src' Making utilities ... make[3]: Entering directory '/<>/src/utilities' mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c amg_linklist.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c binsearch.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c exchange_data.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c fortran_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_ap.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_complex.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_memory.c In file included from exchange_data.c:20:0: exchange_data.c: In function ‘hypre_DataExchangeList’: _hypre_utilities.h:458:3: warning: ‘term_requests’ may be used uninitialized in this function [-Wmaybe-uninitialized] ( hypre_Free((char *)ptr), ptr = NULL ) ^~~~~~~~~~ exchange_data.c:183:23: note: ‘term_requests’ was declared here hypre_MPI_Request *term_requests, term_request1, request_parent; ^~~~~~~~~~~~~ In file included from exchange_data.c:20:0: _hypre_utilities.h:458:3: warning: ‘term_statuses’ may be used uninitialized in this function [-Wmaybe-uninitialized] ( hypre_Free((char *)ptr), ptr = NULL ) ^~~~~~~~~~ exchange_data.c:184:23: note: ‘term_statuses’ was declared here hypre_MPI_Status *term_statuses, term_status1, status_parent; ^~~~~~~~~~~~~ In file included from exchange_data.c:20:0: _hypre_utilities.h:458:3: warning: ‘contact_statuses’ may be used uninitialized in this function [-Wmaybe-uninitialized] ( hypre_Free((char *)ptr), ptr = NULL ) ^~~~~~~~~~ exchange_data.c:178:43: note: ‘contact_statuses’ was declared here hypre_MPI_Status *response_statuses, *contact_statuses; ^~~~~~~~~~~~~~~~ exchange_data.c:410:10: warning: ‘response_statuses’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_MPI_Testall(num_contacts, response_requests, &responses_complete, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ response_statuses); ~~~~~~~~~~~~~~~~~~ In file included from exchange_data.c:20:0: _hypre_utilities.h:458:3: warning: ‘contact_requests’ may be used uninitialized in this function [-Wmaybe-uninitialized] ( hypre_Free((char *)ptr), ptr = NULL ) ^~~~~~~~~~ exchange_data.c:177:43: note: ‘contact_requests’ was declared here hypre_MPI_Request *response_requests, *contact_requests; ^~~~~~~~~~~~~~~~ exchange_data.c:410:10: warning: ‘response_requests’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_MPI_Testall(num_contacts, response_requests, &responses_complete, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ response_statuses); ~~~~~~~~~~~~~~~~~~ mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_printf.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_qsort.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c memory_dmalloc.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c mpistubs.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c qsplit.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c random.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c threading.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c timer.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c timing.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c umalloc_local.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_mpi_comm_f2c.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_error.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c F90_HYPRE_error.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_prefix_sum.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_merge_sort.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_hopscotch_hash.c Building libHYPRE_utilities.so ... mpiCC -shared -o libHYPRE_utilities-2.11.1.so amg_linklist.o binsearch.o exchange_data.o fortran_matrix.o hypre_ap.o hypre_complex.o hypre_memory.o hypre_printf.o hypre_qsort.o memory_dmalloc.o mpistubs.o qsplit.o random.o threading.o timer.o timing.o umalloc_local.o hypre_mpi_comm_f2c.o hypre_error.o F90_HYPRE_error.o hypre_prefix_sum.o hypre_merge_sort.o hypre_hopscotch_hash.o -lmpi -lm -Wl,-soname,libHYPRE_utilities-2.11.1.so -Wl,-z,defs ln -s libHYPRE_utilities-2.11.1.so libHYPRE_utilities.so cp -fR ./HYPRE_*.h /<>/src/hypre/include cp -fR ./_hypre_utilities.h /<>/src/hypre/include cp -fR ./hypre_hopscotch_hash.h /<>/src/hypre/include cp -fR ./fortran*.h /<>/src/hypre/include make[3]: Leaving directory '/<>/src/utilities' Making multivector ... make[3]: Entering directory '/<>/src/multivector' mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I. -I./.. -I./../utilities -c multivector.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I. -I./.. -I./../utilities -c temp_multivector.c Building libHYPRE_multivector.so ... mpiCC -shared -o libHYPRE_multivector-2.11.1.so multivector.o temp_multivector.o ../utilities/libHYPRE_utilities.so -Wl,-soname,libHYPRE_multivector-2.11.1.so -Wl,-z,defs ln -s libHYPRE_multivector-2.11.1.so libHYPRE_multivector.so cp -fR *.h /<>/src/hypre/include make[3]: Leaving directory '/<>/src/multivector' Making krylov ... make[3]: Entering directory '/<>/src/krylov' mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -c bicgstab.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -c cgnr.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -c gmres.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -c flexgmres.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -c lgmres.c gmres.c: In function ‘hypre_GMRESSolve’: gmres.c:599:29: warning: ‘rs_2’ may be used uninitialized in this function [-Wmaybe-uninitialized] rs_2[k] = t/hh[k][k]; ~~~~~~~~^~~~~~~~~~~~ mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -c HYPRE_bicgstab.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -c HYPRE_cgnr.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -c HYPRE_gmres.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -c HYPRE_lgmres.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -c HYPRE_flexgmres.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -c HYPRE_pcg.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -c pcg.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -c HYPRE_lobpcg.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -c lobpcg.c lobpcg.c: In function ‘lobpcg_solve’: lobpcg.c:98:3: warning: ‘blockVectorBY’ may be used uninitialized in this function [-Wmaybe-uninitialized] mv_MultiVectorByMultiVector( x, y, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ utilities_FortranMatrixGlobalHeight( xy ), ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ utilities_FortranMatrixHeight( xy ), ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ utilities_FortranMatrixWidth( xy ), ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ utilities_FortranMatrixValues( xy ) ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lobpcg.c:286:22: note: ‘blockVectorBY’ was declared here mv_MultiVectorPtr blockVectorBY; /* B*Y */ ^~~~~~~~~~~~~ Building libHYPRE_krylov.so ... mpiCC -shared -o libHYPRE_krylov-2.11.1.so bicgstab.o cgnr.o gmres.o flexgmres.o lgmres.o HYPRE_bicgstab.o HYPRE_cgnr.o HYPRE_gmres.o HYPRE_lgmres.o HYPRE_flexgmres.o HYPRE_pcg.o pcg.o HYPRE_lobpcg.o lobpcg.o ../utilities/libHYPRE_utilities.so ../multivector/libHYPRE_multivector.so -L/usr/lib/lapack -llapack -lm -Wl,-soname,libHYPRE_krylov-2.11.1.so -Wl,-z,defs ln -s libHYPRE_krylov-2.11.1.so libHYPRE_krylov.so cp -fR ./HYPRE_*.h /<>/src/hypre/include cp -fR ./krylov.h /<>/src/hypre/include cp -fR ./lobpcg.h /<>/src/hypre/include make[3]: Leaving directory '/<>/src/krylov' Making seq_mv ... make[3]: Entering directory '/<>/src/seq_mv' mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_matop.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_matvec.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c genpart.c In file included from seq_mv.h:23:0, from csr_matrix.c:19: csr_matrix.c: In function ‘hypre_CSRMatrixRead’: ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf csr_matrix.c:196:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &num_rows); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf csr_matrix.c:201:7: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &matrix_i[j]); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf csr_matrix.c:214:7: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &matrix_j[j]); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf csr_matrix.c:226:7: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%le", &matrix_data[j]); ^~~~~~~~~~~~ mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_csr_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_mapped_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_multiblock_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_vector.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c mapped_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c multiblock_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c vector.c In file included from seq_mv.h:23:0, from vector.c:19: vector.c: In function ‘hypre_SeqVectorRead’: ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf vector.c:147:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &size); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf vector.c:155:7: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%le", &data[j]); ^~~~~~~~~~~~ Building libHYPRE_seq_mv.so ... mpiCC -shared -o libHYPRE_seq_mv-2.11.1.so csr_matop.o csr_matrix.o csr_matvec.o genpart.o HYPRE_csr_matrix.o HYPRE_mapped_matrix.o HYPRE_multiblock_matrix.o HYPRE_vector.o mapped_matrix.o multiblock_matrix.o vector.o ../utilities/libHYPRE_utilities.so -Wl,-soname,libHYPRE_seq_mv-2.11.1.so -Wl,-z,defs ln -s libHYPRE_seq_mv-2.11.1.so libHYPRE_seq_mv.so cp -fR ./HYPRE_*.h /<>/src/hypre/include cp -fR ./seq_mv.h /<>/src/hypre/include make[3]: Leaving directory '/<>/src/seq_mv' Making parcsr_mv ... make[3]: Entering directory '/<>/src/parcsr_mv' mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c communicationT.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c F90_HYPRE_parcsr_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c F90_HYPRE_parcsr_vector.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c F90_parcsr_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c F90_par_vector.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c HYPRE_parcsr_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c HYPRE_parcsr_vector.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c new_commpkg.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c numbers.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c par_csr_aat.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c par_csr_assumed_part.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c par_csr_bool_matop.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c par_csr_bool_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c par_csr_communication.c par_csr_aat.c: In function ‘hypre_ParCSRAAt’: par_csr_aat.c:418:4: warning: ‘A_ext_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_ParAat_RowSizes( ^~~~~~~~~~~~~~~~~~~~~~ &C_diag_i, &C_offd_i, B_marker, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A_diag_i, A_diag_j, ~~~~~~~~~~~~~~~~~~~ A_offd_i, A_offd_j, A_col_map_offd, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A_ext_i, A_ext_j, A_ext_row_map, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ &C_diag_size, &C_offd_size, ~~~~~~~~~~~~~~~~~~~~~~~~~~~ num_rows_diag_A, num_cols_offd_A, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ num_rows_A_ext, ~~~~~~~~~~~~~~~ first_col_diag_A, first_row_index_A ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ); ~ par_csr_aat.c:349:21: warning: ‘A_ext_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *A_ext_i; ^~~~~~~ par_csr_aat.c:579:56: warning: ‘A_ext_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] a_b_product = a_entry * A_ext_data[jj3]; ~~~~~~~~~~^~~~~ par_csr_aat.c:807:7: warning: ‘A_ext’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_CSRMatrixDestroy(A_ext); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from _hypre_parcsr_mv.h:9:0, from par_csr_bool_matrix.c:22: par_csr_bool_matrix.c: In function ‘hypre_CSRBooleanMatrixRead’: ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_bool_matrix.c:116:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &num_rows); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_bool_matrix.c:121:7: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &matrix_i[j]); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_bool_matrix.c:134:7: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &matrix_j[j]); ^~~~~~~~~~~~ par_csr_bool_matrix.c: In function ‘hypre_ParCSRBooleanMatrixRead’: ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_bool_matrix.c:399:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &global_num_rows); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_bool_matrix.c:400:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &global_num_cols); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_bool_matrix.c:401:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &num_cols_offd); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_bool_matrix.c:403:12: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d %d", &row_starts[i], &col_starts[i]); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_bool_matrix.c:408:9: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &col_map_offd[i]); ^~~~~~~~~~~~ mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c par_csr_matop.c par_csr_communication.c: In function ‘hypre_MatvecCommPkgCreate_core’: par_csr_communication.c:469:23: warning: ‘requests’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_MPI_Request *requests; ^~~~~~~~ par_csr_bool_matop.c: In function ‘hypre_ParBooleanAAt’: par_csr_bool_matop.c:677:4: warning: ‘A_ext_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_ParAat_RowSizes( ^~~~~~~~~~~~~~~~~~~~~~ &C_diag_i, &C_offd_i, B_marker, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A_diag_i, A_diag_j, ~~~~~~~~~~~~~~~~~~~ A_offd_i, A_offd_j, A_col_map_offd, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A_ext_i, A_ext_j, A_ext_row_map, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ &C_diag_size, &C_offd_size, ~~~~~~~~~~~~~~~~~~~~~~~~~~~ num_rows_diag_A, num_cols_offd_A, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ num_rows_A_ext, ~~~~~~~~~~~~~~~ first_col_diag_A, first_row_index_A ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ); ~ par_csr_bool_matop.c:614:27: warning: ‘A_ext_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *A_ext_i; ^~~~~~~ par_csr_bool_matop.c:1025:7: warning: ‘A_ext’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_CSRBooleanMatrixDestroy(A_ext); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_bool_matrix.c: In function ‘hypre_ParCSRBooleanMatrixPrintIJ’: par_csr_bool_matrix.c:575:36: warning: ‘offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] J = col_map_offd[offd_j[j]]; ~~~~~~^~~ par_csr_bool_matrix.c:526:19: warning: ‘offd_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *offd_i; ^~~~~~ mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c par_csr_matrix.c par_csr_bool_matop.c: In function ‘hypre_ParBooleanMatmul’: par_csr_bool_matop.c:163:25: warning: ‘B_ext_diag_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] B_ext_diag_j[cnt_diag++] = Bs_ext_j[j] - first_col_diag_B; ^ par_csr_bool_matop.c:209:25: warning: ‘col_map_offd_C’ may be used uninitialized in this function [-Wmaybe-uninitialized] B_ext_offd_j[i] = hypre_BinarySearch(col_map_offd_C, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B_ext_offd_j[i], ~~~~~~~~~~~~~~~~ num_cols_offd_C); ~~~~~~~~~~~~~~~~ par_csr_bool_matop.c:310:52: warning: ‘B_ext_offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] i3 = num_cols_diag_B+B_ext_offd_j[jj3]; ~~~~~~~~~~~~^~~~~ par_csr_bool_matop.c:67:27: warning: ‘Bs_ext_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *Bs_ext_j; ^~~~~~~~ par_csr_bool_matop.c:66:27: warning: ‘Bs_ext_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *Bs_ext_i; ^~~~~~~~ par_csr_bool_matop.c:169:7: warning: ‘Bs_ext’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_CSRBooleanMatrixDestroy(Bs_ext); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_bool_matrix.c: In function ‘hypre_CSRBooleanMatrixToParCSRBooleanMatrix’: par_csr_bool_matrix.c:841:17: warning: ‘a_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_BuildCSRBooleanMatrixMPIDataType(local_num_nonzeros[i], ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ local_num_rows[i], ~~~~~~~~~~~~~~~~~~ &a_i[row_starts[i]], ~~~~~~~~~~~~~~~~~~~~ &a_j[ind], ~~~~~~~~~~ &csr_matrix_datatypes[i]); ~~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_bool_matrix.c:840:26: warning: ‘a_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] ind = a_i[row_starts[i]]; ^ In file included from _hypre_parcsr_mv.h:9:0, from par_csr_matrix.c:19: par_csr_matrix.c: In function ‘hypre_ParCSRMatrixRead’: ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_matrix.c:376:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &global_num_rows); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_matrix.c:377:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &global_num_cols); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_matrix.c:378:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &num_cols_offd); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_matrix.c:381:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d %d %d %d", &row_s, &row_e, &col_s, &col_e); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_matrix.c:396:7: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d", &col_map_offd[i]); ^~~~~~~~~~~~ par_csr_matrix.c: In function ‘hypre_ParCSRMatrixReadIJ’: ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_matrix.c:725:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(file, "%d %d", &global_num_rows, &global_num_cols); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_matrix.c:726:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(file, "%d %d %d", &num_rows, &num_cols, &num_cols_offd); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_matrix.c:727:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(file, "%d %d", &num_nonzeros_diag, &num_nonzeros_offd); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_matrix.c:733:7: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(file, "%d %d", &row_starts[i], &col_starts[i]); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_csr_matrix.c:780:7: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(file, "%d %d %le", &I, &J, &data); ^~~~~~~~~~~~ mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c par_csr_matop_marked.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c par_csr_matvec.c par_csr_matop.c: In function ‘hypre_ParCSRMatrixExtractBExt_Arrays_Overlap’: par_csr_matop.c:1479:27: warning: ‘B_ext_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] *comm_handle_data = hypre_ParCSRCommHandleCreate(1,tmp_comm_pkg,B_int_data, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B_ext_data); ~~~~~~~~~~~ par_csr_matop.c:1320:31: warning: ‘B_int_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] B_int_data[count] = diag_data[k]; ^ par_csr_matrix.c:822:20: warning: ‘offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] offd_j[i] = hypre_BinarySearch(col_map_offd, offd_j[i], num_cols_offd); ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_matrix.c:792:19: warning: ‘offd_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] offd_data[offd_cnt++] = data; ^ par_csr_matop_marked.c: In function ‘hypre_ParMatmul_FC’: par_csr_matop_marked.c:418:25: warning: ‘P_ext_diag_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] P_ext_diag_j[cnt_diag] = Ps_ext_j[j] - first_col_diag_P; ^ par_csr_matop_marked.c:419:28: warning: ‘P_ext_diag_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] P_ext_diag_data[cnt_diag++] = Ps_ext_data[j]; ^ par_csr_matop_marked.c:499:4: warning: ‘map_P_to_C’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_ParMatmul_RowSizes_Marked( ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ &C_diag_i, &C_offd_i, &P_marker, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A_diag_i, A_diag_j, A_offd_i, A_offd_j, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ P_diag_i, P_diag_j, P_offd_i, P_offd_j, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ P_ext_diag_i, P_ext_diag_j, P_ext_offd_i, P_ext_offd_j, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ map_P_to_C, ~~~~~~~~~~~ &C_diag_size, &C_offd_size, ~~~~~~~~~~~~~~~~~~~~~~~~~~~ num_rows_diag_A, num_cols_offd_A, allsquare, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ num_cols_diag_P, num_cols_offd_P, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ num_cols_offd_C, CF_marker, dof_func, dof_func_offd ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ); ~ par_csr_matop_marked.c:465:25: warning: ‘col_map_offd_C’ may be used uninitialized in this function [-Wmaybe-uninitialized] P_ext_offd_j[i] = hypre_BinarySearch(col_map_offd_C, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ P_ext_offd_j[i], ~~~~~~~~~~~~~~~~ num_cols_offd_C); ~~~~~~~~~~~~~~~~ par_csr_matop_marked.c:587:55: warning: ‘P_ext_offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] i3 = num_cols_diag_P+P_ext_offd_j[jj3]; ~~~~~~~~~~~~^~~~~ par_csr_matop_marked.c:588:61: warning: ‘P_ext_offd_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] a_b_product = a_entry * P_ext_offd_data[jj3]; ~~~~~~~~~~~~~~~^~~~~ par_csr_matop_marked.c:315:24: warning: ‘Ps_ext_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *Ps_ext_j; ^~~~~~~~ par_csr_matop_marked.c:314:24: warning: ‘Ps_ext_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *Ps_ext_i; ^~~~~~~~ par_csr_matop_marked.c:313:24: warning: ‘Ps_ext_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Complex *Ps_ext_data; ^~~~~~~~~~~ par_csr_matop_marked.c:425:7: warning: ‘Ps_ext’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_CSRMatrixDestroy(Ps_ext); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_matvec.c: In function ‘hypre_ParCSRMatrixMatvec_FF’: par_csr_matvec.c:535:23: warning: ‘num_sends’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int num_sends, i, j, index, start, num_procs; ^~~~~~~~~ par_csr_matvec.c:625:26: warning: ‘x_tmp’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (num_cols_offd) hypre_CSRMatrixMatvec_FF( alpha, offd, x_tmp, 1.0, y_local, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CF_marker, CF_marker_offd, fpt); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_matvec.c:604:7: warning: ‘comm_handle’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_ParCSRCommHandleDestroy(comm_handle); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c par_vector.c par_csr_matop.c: In function ‘hypre_ParMatmul’: par_csr_matop.c:760:31: warning: ‘col_map_offd_C’ may be used uninitialized in this function [-Wmaybe-uninitialized] B_ext_offd_j[j] = hypre_BinarySearch(col_map_offd_C, B_ext_offd_j[j], ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ num_cols_offd_C); ~~~~~~~~~~~~~~~~ par_csr_matop.c:760:29: warning: ‘B_ext_offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] B_ext_offd_j[j] = hypre_BinarySearch(col_map_offd_C, B_ext_offd_j[j], ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ num_cols_offd_C); ~~~~~~~~~~~~~~~~ par_csr_matop.c:374:21: warning: ‘B_ext_offd_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Complex *B_ext_offd_data; ^~~~~~~~~~~~~~~ par_csr_matop.c:697:17: warning: ‘temp’ may be used uninitialized in this function [-Wmaybe-uninitialized] temp[cnt_offd] = Bs_ext_j[j]; ^ par_csr_matop.c:914:19: warning: ‘B_ext_diag_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] i3 = B_ext_diag_j[jj3]; ~~~^~~~~~~~~~~~~~~~~~~ par_csr_matop.c:369:21: warning: ‘B_ext_diag_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Complex *B_ext_diag_data; ^~~~~~~~~~~~~~~ par_csr_matop.c:698:46: warning: ‘Bs_ext_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] B_ext_offd_j[cnt_offd] = Bs_ext_j[j]; ~~~~~~~~^~~ par_csr_matop.c:631:40: warning: ‘Bs_ext_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] for (j=Bs_ext_i[i]; j < Bs_ext_i[i+1]; j++) ~~~~~~~~^~~~~ par_csr_matop.c:365:21: warning: ‘Bs_ext_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Complex *Bs_ext_data; ^~~~~~~~~~~ par_csr_matop.c:718:10: warning: ‘Bs_ext’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_CSRMatrixDestroy(Bs_ext); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from _hypre_parcsr_mv.h:9:0, from par_vector.c:19: par_vector.c: In function ‘hypre_ParVectorRead’: ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_vector.c:229:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d\n", &global_size); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_vector.c:232:7: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(fp, "%d\n", &partitioning[i]); ^~~~~~~~~~~~ par_vector.c: In function ‘hypre_ParVectorReadIJ’: ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_vector.c:949:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(file, "%d", &global_size); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_vector.c:954:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(file, "%d", partitioning); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_vector.c:957:7: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(file, "%d", partitioning+i); ^~~~~~~~~~~~ ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf par_vector.c:984:7: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(file, "%d %le", &J, local_data + j); ^~~~~~~~~~~~ par_csr_matrix.c: In function ‘hypre_CSRMatrixToParCSRMatrix’: par_csr_matrix.c:1226:10: warning: ‘a_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_BuildCSRMatrixMPIDataType(local_num_nonzeros[i], ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ local_num_rows[i], ~~~~~~~~~~~~~~~~~~ &a_data[ind], ~~~~~~~~~~~~~ &a_i[row_starts[i]], ~~~~~~~~~~~~~~~~~~~~ &a_j[ind], ~~~~~~~~~~ &csr_matrix_datatypes[i]); ~~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_matrix.c:1225:19: warning: ‘a_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] ind = a_i[row_starts[i]]; ^ par_csr_matrix.c:1226:10: warning: ‘a_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_BuildCSRMatrixMPIDataType(local_num_nonzeros[i], ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ local_num_rows[i], ~~~~~~~~~~~~~~~~~~ &a_data[ind], ~~~~~~~~~~~~~ &a_i[row_starts[i]], ~~~~~~~~~~~~~~~~~~~~ &a_j[ind], ~~~~~~~~~~ &csr_matrix_datatypes[i]); ~~~~~~~~~~~~~~~~~~~~~~~~~ mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -c par_make_system.c par_csr_matop.c: In function ‘hypre_ParCSRMatrixTranspose’: par_csr_matop.c:1848:19: warning: ‘send_map_elmts’ may be used uninitialized in this function [-Wmaybe-uninitialized] j_row = send_map_elmts[j]; ~~~~~~^~~~~~~~~~~~~~~~~~~ par_csr_matop.c:1715:15: warning: ‘send_map_starts’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *send_map_starts; ^~~~~~~~~~~~~~~ par_csr_matop.c:1714:15: warning: ‘recv_vec_starts’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *recv_vec_starts; ^~~~~~~~~~~~~~~ par_csr_matop.c:1808:50: warning: ‘send_procs’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_ParCSRCommPkgSendProcs(tmp_comm_pkg) = send_procs; par_csr_matop.c:1807:50: warning: ‘recv_procs’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_ParCSRCommPkgRecvProcs(tmp_comm_pkg) = recv_procs; par_csr_matop.c:1787:55: warning: ‘AT_buf_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] AT_offd_i[send_map_elmts[j]+1] += AT_buf_i[j]; ~~~~~~~~^~~ par_csr_matop.c:1821:22: warning: ‘AT_tmp_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] comm_handle = hypre_ParCSRCommHandleCreate(2,tmp_comm_pkg,AT_tmp_data, ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AT_buf_data); ~~~~~~~~~~~~ par_csr_matop.c:1813:19: warning: ‘AT_tmp_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] comm_handle = hypre_ParCSRCommHandleCreate(12, tmp_comm_pkg, AT_tmp_j, ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AT_buf_j); ~~~~~~~~~ par_csr_matop.c:1799:50: warning: ‘AT_tmp_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] tmp_recv_vec_starts[i+1] += AT_tmp_i[j]; ~~~~~~~~^~~ par_csr_matop.c:1683:32: warning: ‘num_recvs’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int num_sends, num_recvs, num_cols_offd_AT; ^~~~~~~~~ par_csr_matop.c:1683:21: warning: ‘num_sends’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int num_sends, num_recvs, num_cols_offd_AT; ^~~~~~~~~ par_csr_matop.c:1774:7: warning: ‘comm_handle’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_ParCSRCommHandleDestroy(comm_handle); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ par_vector.c: In function ‘hypre_VectorToParVector’: par_vector.c:509:35: warning: ‘v_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] local_data[i] = v_data[i]; ~~~~~~^~~ par_csr_matop.c: In function ‘hypre_ParCSRMatrixAminvDB’: par_csr_matop.c:3079:26: warning: ‘map_to_B’ may be used uninitialized in this function [-Wmaybe-uninitialized] A_col = map_to_B[A_offd_j[j]]; ^ In file included from _hypre_parcsr_mv.h:9:0, from par_csr_matop.c:13: par_csr_matop.c: In function ‘hypre_ParTMatmul’: ./../utilities/_hypre_utilities.h:458:3: warning: ‘map_B_to_C’ may be used uninitialized in this function [-Wmaybe-uninitialized] ( hypre_Free((char *)ptr), ptr = NULL ) ^~~~~~~~~~ par_csr_matop.c:3196:22: note: ‘map_B_to_C’ was declared here HYPRE_Int *map_B_to_C; ^~~~~~~~~~ par_csr_matop.c:3238:21: warning: ‘num_sends_A’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int num_sends_A; ^~~~~~~~~~~ par_csr_matop.c:3603:38: warning: ‘send_map_elmts_A’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (send_map_elmts_A[j1] == ik) ^ par_csr_matop.c:3236:21: warning: ‘send_map_starts_A’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *send_map_starts_A; ^~~~~~~~~~~~~~~~~ par_csr_matop.c:3597:51: warning: ‘C_tmp_offd_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] C_offd_data[nnz_o] = C_tmp_offd_data[jk]; ~~~~~~~~~~~~~~~^~~~ par_csr_matop.c:3430:26: warning: ‘C_tmp_offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] C_tmp_offd_j[i] = map_B_to_C[j_indx]; ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ par_csr_matop.c:3227:17: warning: ‘C_tmp_offd_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *C_tmp_offd_i; ^~~~~~~~~~~~ par_csr_matop.c:3589:51: warning: ‘C_tmp_diag_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] C_diag_data[nnz_d] = C_tmp_diag_data[jk]; ~~~~~~~~~~~~~~~^~~~ par_csr_matop.c:3587:20: warning: ‘C_tmp_diag_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] jcol = C_tmp_diag_j[jk]; ~~~~~^~~~~~~~~~~~~~~~~~ par_csr_matop.c:3219:21: warning: ‘C_ext_offd_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Complex *C_ext_offd_data; ^~~~~~~~~~~~~~~ par_csr_matop.c:3620:29: warning: ‘C_ext_offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] jcol = C_ext_offd_j[j2]; ~~~~~^~~~~~~~~~~~~~~~~~ par_csr_matop.c:3618:66: warning: ‘C_ext_offd_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] for (j2 = C_ext_offd_i[j1]; j2 < C_ext_offd_i[j1+1]; j2++) ^ par_csr_matop.c:3216:21: warning: ‘C_ext_diag_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Complex *C_ext_diag_data; ^~~~~~~~~~~~~~~ par_csr_matop.c:3607:29: warning: ‘C_ext_diag_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] jcol = C_ext_diag_j[j2]; ~~~~~^~~~~~~~~~~~~~~~~~ par_csr_matop.c:3605:66: warning: ‘C_ext_diag_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] for (j2 = C_ext_diag_i[j1]; j2 < C_ext_diag_i[j1+1]; j2++) ^ par_csr_matop.c:3399:56: warning: ‘C_ext_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] C_ext_offd_data[cnt_offd++] = C_ext_data[j]; ~~~~~~~~~~^~~ par_csr_matop.c:3394:24: warning: ‘C_ext_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (C_ext_j[j] < first_col_diag_C || C_ext_j[j] > last_col_diag_C) ~~~~~~~^~~ par_csr_matop.c:3211:17: warning: ‘C_ext_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *C_ext_i; ^~~~~~~ Building libHYPRE_parcsr_mv.so ... Not linking with SHARED_OPTIONS (-Wl,-z,defs) because of circular dependency with ../parcsr_ls/libHYPRE_parcsr_ls.so mpiCC -shared -o libHYPRE_parcsr_mv-2.11.1.so communicationT.o F90_HYPRE_parcsr_matrix.o F90_HYPRE_parcsr_vector.o F90_parcsr_matrix.o F90_par_vector.o HYPRE_parcsr_matrix.o HYPRE_parcsr_vector.o new_commpkg.o numbers.o par_csr_aat.o par_csr_assumed_part.o par_csr_bool_matop.o par_csr_bool_matrix.o par_csr_communication.o par_csr_matop.o par_csr_matrix.o par_csr_matop_marked.o par_csr_matvec.o par_vector.o par_make_system.o ../seq_mv/libHYPRE_seq_mv.so ../utilities/libHYPRE_utilities.so -lmpi -Wl,-soname,libHYPRE_parcsr_mv-2.11.1.so ln -s libHYPRE_parcsr_mv-2.11.1.so libHYPRE_parcsr_mv.so cp -fR ./HYPRE_*.h /<>/src/hypre/include cp -fR ./_hypre_parcsr_mv.h /<>/src/hypre/include make[3]: Leaving directory '/<>/src/parcsr_mv' Making parcsr_block_mv ... make[3]: Entering directory '/<>/src/parcsr_block_mv' mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c csr_block_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c csr_block_matvec.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_matvec.c In file included from ./../seq_mv/seq_mv.h:23:0, from csr_block_matrix.h:26, from _hypre_parcsr_block_mv.h:17, from par_csr_block_matvec.c:19: par_csr_block_matvec.c: In function ‘hypre_ParCSRBlockMatrixMatvec’: ./../utilities/_hypre_utilities.h:458:3: warning: ‘x_buf_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] ( hypre_Free((char *)ptr), ptr = NULL ) ^~~~~~~~~~ par_csr_block_matvec.c:45:41: note: ‘x_buf_data’ was declared here HYPRE_Complex *x_tmp_data, *x_buf_data, *x_local_data; ^~~~~~~~~~ par_csr_block_matvec.c:106:7: warning: ‘x_tmp’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_SeqVectorDestroy(x_tmp); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_block_matvec.c:102:7: warning: ‘comm_handle’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_ParCSRBlockCommHandleDestroy(comm_handle); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_comm.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_rap.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_rap_communication.c par_csr_block_matrix.c: In function ‘hypre_ParCSRBlockMatrixExtractBExt’: par_csr_block_matrix.c:858:19: warning: ‘B_int_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Complex *B_int_data; ^~~~~~~~~~ mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_interp.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_relax.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_block_nodal_systems.c par_csr_block_rap.c: In function ‘hypre_ParCSRBlockMatrixRAP’: par_csr_block_rap.c:1677:42: warning: ‘map_P_to_RAP’ may be used uninitialized in this function [-Wmaybe-uninitialized] i3 = map_P_to_RAP[P_offd_j[jj3]] + num_cols_diag_P; ^ par_csr_block_rap.c:420:25: warning: ‘P_ext_diag_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] P_ext_diag_j[cnt_diag] = Ps_ext_j[j] - first_col_diag_P; ^ par_csr_block_rap.c:281:27: warning: ‘P_ext_diag_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Complex *P_ext_diag_data; ^~~~~~~~~~~~~~~ par_csr_block_rap.c:1694:38: warning: ‘RAP_offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] RAP_offd_j[jj_count_offd] = i3 - num_cols_diag_P; ^ par_csr_block_rap.c:249:27: warning: ‘RAP_offd_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Complex *RAP_offd_data; ^~~~~~~~~~~~~ par_csr_block_rap.c:1436:20: warning: ‘RAP_diag_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] RAP_diag_j[jj_count_diag] = ic; ^ par_csr_block_rap.c:243:27: warning: ‘RAP_diag_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Complex *RAP_diag_data; ^~~~~~~~~~~~~ par_csr_block_rap.c:1101:15: warning: ‘col_map_offd_RAP’ may be used uninitialized in this function [-Wmaybe-uninitialized] + hypre_BinarySearch(col_map_offd_RAP, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RAP_ext_j[i],num_cols_offd_RAP); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_block_rap.c:1557:45: warning: ‘map_Pext_to_RAP’ may be used uninitialized in this function [-Wmaybe-uninitialized] i3 = map_Pext_to_RAP[P_ext_offd_j[jj3]]+num_cols_diag_P; ^ par_csr_block_rap.c:1445:27: warning: ‘RAP_ext_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] jcol = RAP_ext_j[k]; ~~~~~^~~~~~~~~~~~~~ par_csr_block_rap.c:1443:53: warning: ‘RAP_ext_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] for (k=RAP_ext_i[j]; k < RAP_ext_i[j+1]; k++) ^ par_csr_block_rap.c:237:27: warning: ‘RAP_ext_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Complex *RAP_ext_data; ^~~~~~~~~~~~ par_csr_block_rap.c:671:37: warning: ‘P_marker’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (P_marker[i3] < jj_row_begining) ^ par_csr_block_rap.c:932:43: warning: ‘map_P_to_Pext’ may be used uninitialized in this function [-Wmaybe-uninitialized] i3 = map_P_to_Pext[P_offd_j[jj3]] + num_cols_diag_P; ^ par_csr_block_rap.c:467:25: warning: ‘col_map_offd_Pext’ may be used uninitialized in this function [-Wmaybe-uninitialized] P_ext_offd_j[i] = hypre_BinarySearch(col_map_offd_Pext, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ P_ext_offd_j[i], ~~~~~~~~~~~~~~~~ num_cols_offd_Pext); ~~~~~~~~~~~~~~~~~~~ par_csr_block_rap.c:1557:58: warning: ‘P_ext_offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] i3 = map_Pext_to_RAP[P_ext_offd_j[jj3]]+num_cols_diag_P; ~~~~~~~~~~~~^~~~~ par_csr_block_rap.c:285:27: warning: ‘P_ext_offd_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Complex *P_ext_offd_data; ^~~~~~~~~~~~~~~ par_csr_block_rap.c:411:22: warning: ‘Ps_ext_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (Ps_ext_j[j] < first_col_diag_P || Ps_ext_j[j] > last_col_diag_P) ~~~~~~~~^~~ par_csr_block_rap.c:278:27: warning: ‘Ps_ext_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *Ps_ext_i; ^~~~~~~~ par_csr_block_rap.c:277:27: warning: ‘Ps_ext_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Complex *Ps_ext_data; ^~~~~~~~~~~ par_csr_block_rap.c:428:7: warning: ‘Ps_ext’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_CSRBlockMatrixDestroy(Ps_ext); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_block_rap.c:187:27: warning: ‘send_map_starts_RT’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *send_map_starts_RT; ^~~~~~~~~~~~~~~~~~ In file included from ./../seq_mv/seq_mv.h:23:0, from csr_block_matrix.h:26, from _hypre_parcsr_block_mv.h:17, from par_csr_block_relax.c:13: par_csr_block_relax.c: In function ‘hypre_BoomerAMGBlockRelax’: ./../utilities/_hypre_utilities.h:458:3: warning: ‘v_buf_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] ( hypre_Free((char *)ptr), ptr = NULL ) ^~~~~~~~~~ par_csr_block_relax.c:140:20: note: ‘v_buf_data’ was declared here HYPRE_Real *v_buf_data; ^~~~~~~~~~ par_csr_block_relax.c:1239:57: warning: ‘Vext_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] &Vext_data[ii*block_size], ^~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_block_relax.c:417:13: warning: ‘comm_handle’ may be used uninitialized in this function [-Wmaybe-uninitialized] hypre_ParCSRBlockCommHandleDestroy(comm_handle); /* now Vext_data ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_block_interp.c: In function ‘hypre_BoomerAMGBuildBlockInterp’: par_csr_block_interp.c:1172:23: warning: ‘A_ext’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (num_procs > 1) hypre_CSRBlockMatrixDestroy(A_ext); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_block_interp.c: In function ‘hypre_BoomerAMGBuildBlockInterpDiag’: par_csr_block_interp.c:2855:23: warning: ‘A_ext’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (num_procs > 1) hypre_CSRBlockMatrixDestroy(A_ext); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_block_interp.c: In function ‘hypre_BoomerAMGBuildBlockInterpRV’: par_csr_block_interp.c:3977:23: warning: ‘A_ext’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (num_procs > 1) hypre_CSRBlockMatrixDestroy(A_ext); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ par_csr_block_interp.c: In function ‘hypre_BoomerAMGBuildBlockInterpRV2’: par_csr_block_interp.c:5099:23: warning: ‘A_ext’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (num_procs > 1) hypre_CSRBlockMatrixDestroy(A_ext); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Building libHYPRE_parcsr_block_mv.so ... mpiCC -shared -o libHYPRE_parcsr_block_mv-2.11.1.so csr_block_matrix.o csr_block_matvec.o par_csr_block_matrix.o par_csr_block_matvec.o par_csr_block_comm.o par_csr_block_rap.o par_csr_block_rap_communication.o par_csr_block_interp.o par_csr_block_relax.o par_block_nodal_systems.o ../utilities/libHYPRE_utilities.so ../seq_mv/libHYPRE_seq_mv.so ../parcsr_mv/libHYPRE_parcsr_mv.so -lmpi -lm -Wl,-soname,libHYPRE_parcsr_block_mv-2.11.1.so -Wl,-z,defs ln -s libHYPRE_parcsr_block_mv-2.11.1.so libHYPRE_parcsr_block_mv.so cp -fR ./par_csr_block_matrix.h /<>/src/hypre/include cp -fR ./csr_block_matrix.h /<>/src/hypre/include make[3]: Leaving directory '/<>/src/parcsr_block_mv' Making distributed_matrix ... make[3]: Entering directory '/<>/src/distributed_matrix' mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c distributed_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c HYPRE_distributed_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c distributed_matrix_ISIS.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c distributed_matrix_PETSc.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c distributed_matrix_parcsr.c Building libHYPRE_DistributedMatrix.so ... mpiCC -shared -o libHYPRE_DistributedMatrix-2.11.1.so distributed_matrix.o HYPRE_distributed_matrix.o distributed_matrix_ISIS.o distributed_matrix_PETSc.o distributed_matrix_parcsr.o ../utilities/libHYPRE_utilities.so ../parcsr_mv/libHYPRE_parcsr_mv.so -Wl,-soname,libHYPRE_DistributedMatrix-2.11.1.so -Wl,-z,defs ln -s libHYPRE_DistributedMatrix-2.11.1.so libHYPRE_DistributedMatrix.so cp -fR ./distributed_matrix.h /<>/src/hypre/include make[3]: Leaving directory '/<>/src/distributed_matrix' Making IJ_mv ... make[3]: Entering directory '/<>/src/IJ_mv' mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c aux_parcsr_matrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c aux_par_vector.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c F90_HYPRE_IJMatrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c F90_HYPRE_IJVector.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c F90_IJMatrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c HYPRE_IJMatrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c HYPRE_IJVector.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJ_assumed_part.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJMatrix.c In file included from ./_hypre_IJ_mv.h:7:0, from HYPRE_IJMatrix.c:19: HYPRE_IJMatrix.c: In function ‘HYPRE_IJMatrixRead’: ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf HYPRE_IJMatrix.c:832:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(file, "%d %d %d %d", &ilower, &iupper, &jlower, &jupper); ^~~~~~~~~~~~ In file included from ./_hypre_IJ_mv.h:7:0, from HYPRE_IJVector.c:19: HYPRE_IJVector.c: In function ‘HYPRE_IJVectorRead’: ./../utilities/_hypre_utilities.h:844:23: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] #define hypre_fscanf fscanf HYPRE_IJVector.c:551:4: note: in expansion of macro ‘hypre_fscanf’ hypre_fscanf(file, "%d %d", &jlower, &jupper); ^~~~~~~~~~~~ mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJMatrix_parcsr.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJVector.c HYPRE_IJMatrix.c: In function ‘HYPRE_IJMatrixPrint’: HYPRE_IJMatrix.c:959:10: warning: ‘ii’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_ParCSRMatrixRestoreRow((HYPRE_ParCSRMatrix) object, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ii, &ncols, &cols, &values); ~~~~~~~~~~~~~~~~~~~~~~~~~~~ mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJVector_parcsr.c IJMatrix_parcsr.c: In function ‘hypre_IJMatrixGetValuesParCSR’: IJMatrix_parcsr.c:485:34: warning: ‘col_map_offd’ may be used uninitialized in this function [-Wmaybe-uninitialized] cols[indx] = col_map_offd[offd_j[j]]; ^ IJMatrix_parcsr.c:486:35: warning: ‘offd_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] values[indx++] = offd_data[j]; ~~~~~~~~~^~~ IJMatrix_parcsr.c:485:41: warning: ‘offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] cols[indx] = col_map_offd[offd_j[j]]; ~~~~~~^~~ IJMatrix_parcsr.c: In function ‘hypre_IJMatrixSetValuesParCSR’: IJMatrix_parcsr.c:938:30: warning: ‘offd_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] offd_data[cnt_offd++] = values[indx]; ^ IJMatrix_parcsr.c:926:21: warning: ‘offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (offd_j[j] == cols[indx]) ~~~~~~^~~ IJMatrix_parcsr.c:890:43: warning: ‘tmp_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] local_data[cnt++] = tmp_data[i]; ~~~~~~~~^~~ IJMatrix_parcsr.c:687:25: warning: ‘col_map_offd’ may be used uninitialized in this function [-Wmaybe-uninitialized] j_offd = hypre_BinarySearch(col_map_offd,cols[indx]-first, ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ num_cols_offd); ~~~~~~~~~~~~~~ IJMatrix_parcsr.c: In function ‘hypre_IJMatrixAddToValuesParCSR’: IJMatrix_parcsr.c:1439:30: warning: ‘offd_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] offd_data[cnt_offd++] = values[indx]; ^ IJMatrix_parcsr.c:1427:21: warning: ‘offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (offd_j[j] == cols[indx]) ~~~~~~^~~ IJMatrix_parcsr.c:1391:43: warning: ‘tmp_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] local_data[cnt++] = tmp_data[i]; ~~~~~~~~^~~ IJMatrix_parcsr.c:1171:25: warning: ‘col_map_offd’ may be used uninitialized in this function [-Wmaybe-uninitialized] j_offd = hypre_BinarySearch(col_map_offd,cols[indx]-first, ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ num_cols_offd); ~~~~~~~~~~~~~~ IJMatrix_parcsr.c: In function ‘hypre_IJMatrixAssembleParCSR’: IJMatrix_parcsr.c:2744:24: warning: ‘offd_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] offd_data[i_offd++] = local_data[j]; ^ IJMatrix_parcsr.c:2743:21: warning: ‘offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] offd_j[i_offd] = local_j[j]; ^ IJMatrix_parcsr.c: In function ‘hypre_IJMatrixSetValuesOMPParCSR’: IJMatrix_parcsr.c:3391:33: warning: ‘offd_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] offd_data[cnt_offd++] = values[indx]; ^ IJMatrix_parcsr.c:3379:24: warning: ‘offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (offd_j[j] == cols[indx]) ~~~~~~^~~ IJMatrix_parcsr.c:3425:33: warning: ‘diag_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] diag_data[cnt_diag++] = values[indx]; ^ IJMatrix_parcsr.c:3413:24: warning: ‘diag_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (diag_j[j] == cols[indx]) ~~~~~~^~~ IJMatrix_parcsr.c:2909:15: warning: ‘off_proc_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *off_proc_j; ^~~~~~~~~~ IJMatrix_parcsr.c:2908:15: warning: ‘off_proc_i’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int *off_proc_i; ^~~~~~~~~~ IJMatrix_parcsr.c:2907:14: warning: ‘off_proc_i_indx’ may be used uninitialized in this function [-Wmaybe-uninitialized] HYPRE_Int off_proc_i_indx; ^~~~~~~~~~~~~~~ IJMatrix_parcsr.c:3502:22: warning: ‘cancel_indx’ may be used uninitialized in this function [-Wmaybe-uninitialized] cancel_indx += offproc_cnt[i1]; ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ IJMatrix_parcsr.c:3061:28: warning: ‘col_map_offd’ may be used uninitialized in this function [-Wmaybe-uninitialized] j_offd = hypre_BinarySearch(col_map_offd,cols[indx]-first, ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ num_cols_offd); ~~~~~~~~~~~~~~ IJMatrix_parcsr.c: In function ‘hypre_IJMatrixAddToValuesOMPParCSR’: IJMatrix_parcsr.c:4005:33: warning: ‘offd_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] offd_data[cnt_offd++] = values[indx]; ^ IJMatrix_parcsr.c:3993:24: warning: ‘offd_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (offd_j[j] == cols[indx]) ~~~~~~^~~ IJMatrix_parcsr.c:4039:33: warning: ‘diag_data’ may be used uninitialized in this function [-Wmaybe-uninitialized] diag_data[cnt_diag++] = values[indx]; ^ IJMatrix_parcsr.c:4027:24: warning: ‘diag_j’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (diag_j[j] == cols[indx]) ~~~~~~^~~ IJMatrix_parcsr.c:3691:28: warning: ‘col_map_offd’ may be used uninitialized in this function [-Wmaybe-uninitialized] j_offd = hypre_BinarySearch(col_map_offd,cols[indx]-first, ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ num_cols_offd); ~~~~~~~~~~~~~~ Building libHYPRE_IJ_mv.so ... mpiCC -shared -o libHYPRE_IJ_mv-2.11.1.so aux_parcsr_matrix.o aux_par_vector.o F90_HYPRE_IJMatrix.o F90_HYPRE_IJVector.o F90_IJMatrix.o HYPRE_IJMatrix.o HYPRE_IJVector.o IJ_assumed_part.o IJMatrix.o IJMatrix_parcsr.o IJVector.o IJVector_parcsr.o ../utilities/libHYPRE_utilities.so ../seq_mv/libHYPRE_seq_mv.so ../parcsr_mv/libHYPRE_parcsr_mv.so -lmpi -Wl,-soname,libHYPRE_IJ_mv-2.11.1.so -Wl,-z,defs ln -s libHYPRE_IJ_mv-2.11.1.so libHYPRE_IJ_mv.so cp -fR ./HYPRE_*.h /<>/src/hypre/include cp -fR ./_hypre_IJ_mv.h /<>/src/hypre/include make[3]: Leaving directory '/<>/src/IJ_mv' Making matrix_matrix ... make[3]: Entering directory '/<>/src/matrix_matrix' mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../distributed_matrix -I./../seq_mv -I./../parcsr_mv -c HYPRE_ConvertParCSRMatrixToDistributedMatrix.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../distributed_matrix -I./../seq_mv -I./../parcsr_mv -c HYPRE_ConvertPETScMatrixToDistributedMatrix.c Building libHYPRE_MatrixMatrix.so ... mpiCC -shared -o libHYPRE_MatrixMatrix-2.11.1.so HYPRE_ConvertParCSRMatrixToDistributedMatrix.o HYPRE_ConvertPETScMatrixToDistributedMatrix.o ../parcsr_mv/libHYPRE_parcsr_mv.so ../distributed_matrix/libHYPRE_DistributedMatrix.so ../utilities/libHYPRE_utilities.so -Wl,-soname,libHYPRE_MatrixMatrix-2.11.1.so -Wl,-z,defs ln -s libHYPRE_MatrixMatrix-2.11.1.so libHYPRE_MatrixMatrix.so cp -fR ./HYPRE_*.h /<>/src/hypre/include make[3]: Leaving directory '/<>/src/matrix_matrix' Making distributed_ls ... make[3]: Entering directory '/<>/src/distributed_ls' Making pilut ... make[4]: Entering directory '/<>/src/distributed_ls/pilut' mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -c comm.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -c debug.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -c distributed_qsort.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -c distributed_qsort_si.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -c HYPRE_DistributedMatrixPilutSolver.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -c ilut.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -c parilut.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -c parutil.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -c pblas1.c ilut.c: In function ‘hypre_ILUT’: ilut.c:151:9: warning: ‘ierr’ may be used uninitialized in this function [-Wmaybe-uninitialized] return( ierr ); ^ mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -c serilut.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -c trifactor.c mpicc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -O3 -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -c util.c Building libHYPRE_DistributedMatrixPilutSolver.so ... mpiCC -shared -o libHYPRE_DistributedMatrixPilutSolver-2.11.1.so comm.o debug.o distributed_qsort.o distributed_qsort_si.o HYPRE_DistributedMatrixPilutSolver.o ilut.o parilut.o parutil.o pblas1.o serilut.o trifactor.o util.o ../../utilities/libHYPRE_utilities.so ../../distributed_matrix/libHYPRE_DistributedMatrix.so -lmpi -lm null -lblas -Wl,-soname,libHYPRE_DistributedMatrixPilutSolver-2.11.1.so -Wl,-z,defs g++: error: null: No such file or directory Makefile:88: recipe for target 'libHYPRE_DistributedMatrixPilutSolver.so' failed make[4]: *** [libHYPRE_DistributedMatrixPilutSolver.so] Error 1 make[4]: Leaving directory '/<>/src/distributed_ls/pilut' Makefile:22: recipe for target 'all' failed make[3]: *** [all] Error 1 make[3]: Leaving directory '/<>/src/distributed_ls' Makefile:89: recipe for target 'all' failed make[2]: *** [all] Error 1 make[2]: Leaving directory '/<>/src' dh_auto_build: make -j4 returned exit code 2 debian/rules:83: recipe for target 'override_dh_auto_build' failed make[1]: *** [override_dh_auto_build] Error 2 make[1]: Leaving directory '/<>' debian/rules:14: recipe for target 'build-arch' failed make: *** [build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2 -------------------------------------------------------------------------------- Build finished at 20170923-2303 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: i386 Build-Space: 52020 Build-Time: 21 Distribution: artful Fail-Stage: build Host Architecture: i386 Install-Time: 13 Job: hypre_2.11.1-4.dsc Machine Architecture: amd64 Package: hypre Package-Time: 35 Source-Version: 2.11.1-4 Space: 52020 Status: attempted Version: 2.11.1-4 -------------------------------------------------------------------------------- Finished at 20170923-2303 Build needed 00:00:35, 52020k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=artful --arch=i386 PACKAGEBUILD-13434926 Scanning for processes to kill in build PACKAGEBUILD-13434926 RUN: /usr/share/launchpad-buildd/slavebin/in-target umount-chroot --backend=chroot --series=artful --arch=i386 PACKAGEBUILD-13434926 Stopping target for build PACKAGEBUILD-13434926 RUN: /usr/share/launchpad-buildd/slavebin/in-target remove-build --backend=chroot --series=artful --arch=i386 PACKAGEBUILD-13434926 Removing build PACKAGEBUILD-13434926