https://launchpad.net/ubuntu/+archive/test-rebuild-20181220-gcc9/+build/15900740 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lgw01-amd64-022 4.4.0-141-generic #167-Ubuntu SMP Wed Dec 5 10:40:15 UTC 2018 x86_64 Buildd toolchain package versions: launchpad-buildd_165 python-lpbuildd_165 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 9 Jan 04:06:13 ntpdate[1822]: adjust time server 10.211.37.1 offset -0.017556 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15900740 /home/buildd/filecache-default/020b0022f770b890c357907d03d82568c584d50e Creating target for build PACKAGEBUILD-15900740 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15900740 Starting target for build PACKAGEBUILD-15900740 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15900740 'deb http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco main' 'deb http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco main' 'deb http://ftpmaster.internal/ubuntu disco main restricted universe multiverse' 'deb http://ftpmaster.internal/ubuntu disco-security main restricted universe multiverse' 'deb http://ftpmaster.internal/ubuntu disco-updates main restricted universe multiverse' Overriding sources.list in build-PACKAGEBUILD-15900740 RUN: /usr/share/launchpad-buildd/slavebin/in-target add-trusted-keys --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15900740 Adding trusted keys to build-PACKAGEBUILD-15900740 Warning: apt-key output should not be parsed (stdout is not a terminal) OK Warning: apt-key output should not be parsed (stdout is not a terminal) /etc/apt/trusted.gpg -------------------- pub rsa1024 2009-10-22 [SC] 60C3 1780 3A41 BA51 845E 371A 1E93 77A2 BA9E F27F uid [ unknown] Launchpad Toolchain builds /etc/apt/trusted.gpg.d/ubuntu-keyring-2012-archive.gpg ------------------------------------------------------ pub rsa4096 2012-05-11 [SC] 790B C727 7767 219C 42C8 6F93 3B4F E6AC C0B2 1F32 uid [ unknown] Ubuntu Archive Automatic Signing Key (2012) /etc/apt/trusted.gpg.d/ubuntu-keyring-2012-cdimage.gpg ------------------------------------------------------ pub rsa4096 2012-05-11 [SC] 8439 38DF 228D 22F7 B374 2BC0 D94A A3F0 EFE2 1092 uid [ unknown] Ubuntu CD Image Automatic Signing Key (2012) /etc/apt/trusted.gpg.d/ubuntu-keyring-2018-archive.gpg ------------------------------------------------------ pub rsa4096 2018-09-17 [SC] F6EC B376 2474 EDA9 D21B 7022 8719 20D1 991B C93C uid [ unknown] Ubuntu Archive Automatic Signing Key (2018) RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15900740 Updating target for build PACKAGEBUILD-15900740 Get:1 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco InRelease [15.4 kB] Get:2 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:3 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco InRelease [15.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:5 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:6 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main amd64 Packages [43.1 kB] Get:7 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main Translation-en [13.3 kB] Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 Packages [198 kB] Get:9 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main Translation-en [26.9 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main amd64 Packages [1007 kB] Get:11 http://ftpmaster.internal/ubuntu disco/main Translation-en [514 kB] Get:12 http://ftpmaster.internal/ubuntu disco/restricted amd64 Packages [9964 B] Get:13 http://ftpmaster.internal/ubuntu disco/universe amd64 Packages [8944 kB] Get:14 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5170 kB] Get:15 http://ftpmaster.internal/ubuntu disco/multiverse amd64 Packages [159 kB] Get:16 http://ftpmaster.internal/ubuntu disco/multiverse Translation-en [113 kB] Fetched 16.6 MB in 5s (3454 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: g++-8 libstdc++-8-dev Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: cpp-9 g++-9 gcc-9 gcc-9-base libgcc-9-dev libstdc++-9-dev The following packages will be upgraded: binutils binutils-common binutils-x86-64-linux-gnu cpp cpp-8 dash dpkg dpkg-dev e2fslibs e2fsprogs g++ g++-8 gcc gcc-8 gcc-8-base grep init init-system-helpers libasan5 libassuan0 libatomic1 libbinutils libcc1-0 libcom-err2 libcomerr2 libdpkg-perl libext2fs2 libgcc-8-dev libgcc1 libgnutls30 libgomp1 libitm1 liblsan0 libmpx2 libquadmath0 libsemanage-common libsemanage1 libsqlite3-0 libss2 libstdc++-8-dev libstdc++6 libtsan0 libubsan1 libzstd1 sed tar tzdata 47 upgraded, 6 newly installed, 0 to remove and 0 not upgraded. Need to get 64.4 MB of archives. After this operation, 116 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main amd64 tar amd64 1.30+dfsg-4 [242 kB] Get:2 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 gcc-9-base amd64 9-20190102-0ubuntu2 [187 kB] Get:3 http://ftpmaster.internal/ubuntu disco/main amd64 dpkg amd64 1.19.2ubuntu2 [1101 kB] Get:4 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 libgcc1 amd64 1:9-20190102-0ubuntu2 [40.1 kB] Get:5 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 libstdc++6 amd64 9-20190102-0ubuntu2 [413 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main amd64 dash amd64 0.5.10.2-3ubuntu1 [86.0 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main amd64 grep amd64 3.3-1 [149 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main amd64 sed amd64 4.7-1 [190 kB] Get:9 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 libgomp1 amd64 9-20190102-0ubuntu2 [90.0 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main amd64 init-system-helpers all 1.56+nmu1 [38.2 kB] Get:11 http://ftpmaster.internal/ubuntu disco/main amd64 libext2fs2 amd64 1.44.5-1 [159 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main amd64 e2fsprogs amd64 1.44.5-1 [514 kB] Get:13 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 libitm1 amd64 9-20190102-0ubuntu2 [27.9 kB] Get:14 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 libatomic1 amd64 9-20190102-0ubuntu2 [9244 B] Get:15 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 libasan5 amd64 9-20190102-0ubuntu2 [394 kB] Get:16 http://ftpmaster.internal/ubuntu disco/main amd64 init amd64 1.56+nmu1 [6080 B] Get:17 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage-common all 2.8-2 [7016 B] Get:18 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage1 amd64 2.8-2 [85.2 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main amd64 libzstd1 amd64 1.3.8+dfsg-3 [226 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main amd64 libgnutls30 amd64 3.6.5-2ubuntu1 [759 kB] Get:21 http://ftpmaster.internal/ubuntu disco/main amd64 libcom-err2 amd64 1.44.5-1 [9372 B] Get:22 http://ftpmaster.internal/ubuntu disco/main amd64 libss2 amd64 1.44.5-1 [11.1 kB] Get:23 http://ftpmaster.internal/ubuntu disco/main amd64 libsqlite3-0 amd64 3.26.0-3 [530 kB] Get:24 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 liblsan0 amd64 9-20190102-0ubuntu2 [140 kB] Get:25 http://ftpmaster.internal/ubuntu disco/main amd64 tzdata all 2018i-1 [189 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main amd64 dpkg-dev all 1.19.2ubuntu2 [549 kB] Get:27 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 libtsan0 amd64 9-20190102-0ubuntu2 [300 kB] Get:28 http://ftpmaster.internal/ubuntu disco/main amd64 libdpkg-perl all 1.19.2ubuntu2 [227 kB] Get:29 http://ftpmaster.internal/ubuntu disco/main amd64 e2fslibs amd64 1.44.5-1 [2704 B] Get:30 http://ftpmaster.internal/ubuntu disco/main amd64 libassuan0 amd64 2.5.2-1 [35.1 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main amd64 libcomerr2 amd64 1.44.5-1 [2700 B] Get:32 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 libubsan1 amd64 9-20190102-0ubuntu2 [129 kB] Get:33 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main amd64 libmpx2 amd64 8.2.0-13ubuntu1 [11.7 kB] Get:34 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 libquadmath0 amd64 9-20190102-0ubuntu2 [145 kB] Get:35 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main amd64 g++-8 amd64 8.2.0-13ubuntu1 [8113 kB] Get:36 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main amd64 gcc-8 amd64 8.2.0-13ubuntu1 [8004 kB] Get:37 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main amd64 libstdc++-8-dev amd64 8.2.0-13ubuntu1 [1538 kB] Get:38 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main amd64 libgcc-8-dev amd64 8.2.0-13ubuntu1 [2304 kB] Get:39 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 libcc1-0 amd64 9-20190102-0ubuntu2 [40.3 kB] Get:40 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main amd64 binutils-x86-64-linux-gnu amd64 2.31.1-11ubuntu1 [1829 kB] Get:41 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main amd64 libbinutils amd64 2.31.1-11ubuntu1 [484 kB] Get:42 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main amd64 binutils amd64 2.31.1-11ubuntu1 [3396 B] Get:43 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main amd64 binutils-common amd64 2.31.1-11ubuntu1 [194 kB] Get:44 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main amd64 cpp-8 amd64 8.2.0-13ubuntu1 [7221 kB] Get:45 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main amd64 gcc-8-base amd64 8.2.0-13ubuntu1 [18.6 kB] Get:46 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 cpp-9 amd64 9-20190102-0ubuntu2 [7372 kB] Get:47 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 libgcc-9-dev amd64 9-20190102-0ubuntu2 [2362 kB] Get:48 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 gcc-9 amd64 9-20190102-0ubuntu2 [8002 kB] Get:49 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 libstdc++-9-dev amd64 9-20190102-0ubuntu2 [1603 kB] Get:50 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 g++-9 amd64 9-20190102-0ubuntu2 [8244 kB] Get:51 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 g++ amd64 4:9-20181126-1ubuntu3 [1576 B] Get:52 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 gcc amd64 4:9-20181126-1ubuntu3 [5188 B] Get:53 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main amd64 cpp amd64 4:9-20181126-1ubuntu3 [42.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 64.4 MB in 7s (9468 kB/s) (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../tar_1.30+dfsg-4_amd64.deb ... Unpacking tar (1.30+dfsg-4) over (1.30+dfsg-3) ... Setting up tar (1.30+dfsg-4) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../dpkg_1.19.2ubuntu2_amd64.deb ... Unpacking dpkg (1.19.2ubuntu2) over (1.19.2ubuntu1) ... Setting up dpkg (1.19.2ubuntu2) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../dash_0.5.10.2-3ubuntu1_amd64.deb ... Unpacking dash (0.5.10.2-3ubuntu1) over (0.5.10.2-2) ... Setting up dash (0.5.10.2-3ubuntu1) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../archives/grep_3.3-1_amd64.deb ... Unpacking grep (3.3-1) over (3.1-3) ... Setting up grep (3.3-1) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../archives/sed_4.7-1_amd64.deb ... Unpacking sed (4.7-1) over (4.5-2) ... Setting up sed (4.7-1) ... 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Setting up libquadmath0:amd64 (9-20190102-0ubuntu2) ... Setting up libcom-err2:amd64 (1.44.5-1) ... Setting up libgomp1:amd64 (9-20190102-0ubuntu2) ... Setting up libatomic1:amd64 (9-20190102-0ubuntu2) ... Setting up libss2:amd64 (1.44.5-1) ... Setting up libcc1-0:amd64 (9-20190102-0ubuntu2) ... Setting up e2fslibs:amd64 (1.44.5-1) ... Setting up tzdata (2018i-1) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Jan 9 04:06:55 UTC 2019. Universal Time is now: Wed Jan 9 04:06:55 UTC 2019. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up init (1.56+nmu1) ... Setting up libtsan0:amd64 (9-20190102-0ubuntu2) ... Setting up libdpkg-perl (1.19.2ubuntu2) ... Setting up e2fsprogs (1.44.5-1) ... Setting up liblsan0:amd64 (9-20190102-0ubuntu2) ... Setting up binutils-common:amd64 (2.31.1-11ubuntu1) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Setting up cpp-9 (9-20190102-0ubuntu2) ... Setting up gcc-8-base:amd64 (8.2.0-13ubuntu1) ... Setting up libsqlite3-0:amd64 (3.26.0-3) ... Setting up libcomerr2:amd64 (1.44.5-1) ... Setting up libasan5:amd64 (9-20190102-0ubuntu2) ... Setting up libassuan0:amd64 (2.5.2-1) ... Setting up libitm1:amd64 (9-20190102-0ubuntu2) ... Setting up libubsan1:amd64 (9-20190102-0ubuntu2) ... Setting up cpp-8 (8.2.0-13ubuntu1) ... Setting up cpp (4:9-20181126-1ubuntu3) ... Setting up libgcc-9-dev:amd64 (9-20190102-0ubuntu2) ... Setting up libbinutils:amd64 (2.31.1-11ubuntu1) ... Setting up libstdc++-9-dev:amd64 (9-20190102-0ubuntu2) ... Setting up libmpx2:amd64 (8.2.0-13ubuntu1) ... Setting up libgcc-8-dev:amd64 (8.2.0-13ubuntu1) ... Setting up binutils-x86-64-linux-gnu (2.31.1-11ubuntu1) ... Setting up libstdc++-8-dev:amd64 (8.2.0-13ubuntu1) ... Setting up binutils (2.31.1-11ubuntu1) ... Setting up gcc-9 (9-20190102-0ubuntu2) ... Setting up g++-9 (9-20190102-0ubuntu2) ... Setting up gcc (4:9-20181126-1ubuntu3) ... Setting up gcc-8 (8.2.0-13ubuntu1) ... Setting up g++-8 (8.2.0-13ubuntu1) ... Setting up dpkg-dev (1.19.2ubuntu2) ... Setting up g++ (4:9-20181126-1ubuntu3) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-15900740 amd64 disco -c chroot:build-PACKAGEBUILD-15900740 --arch=amd64 --dist=disco --nolog -A apophenia_1.0+ds-7build1.dsc Initiating build PACKAGEBUILD-15900740 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-141-generic #167-Ubuntu SMP Wed Dec 5 10:40:15 UTC 2018 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-022.buildd +==============================================================================+ | apophenia 1.0+ds-7build1 (amd64) 09 Jan 2019 04:06 | +==============================================================================+ Package: apophenia Version: 1.0+ds-7build1 Source Version: 1.0+ds-7build1 Distribution: disco Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/apophenia-OoqTkU/apophenia-1.0+ds' with '<>' I: NOTICE: Log filtering will replace 'build/apophenia-OoqTkU' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-15900740/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- apophenia_1.0+ds-7build1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-u6oBX7/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-u6oBX7/apt_archive ./ InRelease Get:2 copy:/<>/resolver-u6oBX7/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-u6oBX7/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-u6oBX7/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-u6oBX7/apt_archive ./ Packages [525 B] Fetched 2858 B in 0s (180 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-8 libstdc++-8-dev Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-u6oBX7/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 13710 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 9), autotools-dev, autoconf-archive, gnulib, dh-autoreconf, libtool, pkg-config, help2man, zlib1g-dev, default-libmysqlclient-dev, libsqlite3-dev, libgsl-dev, bc, sqlite3, graphviz, doxygen, texlive-latex-recommended, texlive-fonts-recommended, ghostscript, rdfind, symlinks Filtered Build-Depends: debhelper (>= 9), autotools-dev, autoconf-archive, gnulib, dh-autoreconf, libtool, pkg-config, help2man, zlib1g-dev, default-libmysqlclient-dev, libsqlite3-dev, libgsl-dev, bc, sqlite3, graphviz, doxygen, texlive-latex-recommended, texlive-fonts-recommended, ghostscript, rdfind, symlinks dpkg-deb: building package 'sbuild-build-depends-apophenia-dummy' in '/<>/resolver-YRWiAo/apt_archive/sbuild-build-depends-apophenia-dummy.deb'. Ign:1 copy:/<>/resolver-YRWiAo/apt_archive ./ InRelease Get:2 copy:/<>/resolver-YRWiAo/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-YRWiAo/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-YRWiAo/apt_archive ./ Sources [358 B] Get:5 copy:/<>/resolver-YRWiAo/apt_archive ./ Packages [676 B] Fetched 3153 B in 0s (223 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install apophenia build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-8 libstdc++-8-dev Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf autoconf-archive automake autopoint autotools-dev bc bison bsdmainutils debhelper default-libmysqlclient-dev dh-autoreconf dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gettext gettext-base ghostscript gnulib gperf graphviz groff-base help2man intltool-debian libarchive-zip-perl libavahi-client3 libavahi-common-data libavahi-common3 libbison-dev libbrotli1 libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-7 libcroco3 libcups2 libcupsimage2 libdatrie1 libdbus-1-3 libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgsl-dev libgsl23 libgslcblas0 libgssapi-krb5-2 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz-icu0 libharfbuzz0b libice6 libicu63 libijs-0.35 libjbig0 libjbig2dec0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblab-gamut1 libllvm7 liblocale-gettext-perl libltdl7 libmagic-mgc libmagic1 libmysqlclient-dev libmysqlclient20 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpathplan4 libpipeline1 libpixman-1-0 libpotrace0 libptexenc1 libsigsegv2 libsm6 libsqlite3-dev libsynctex2 libteckit0 libtexlua52 libtexlua53 libtexluajit2 libtext-unidecode-perl libthai-data libthai0 libtiff5 libtool libwebp6 libwoff1 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml2 libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzzip-0-13 m4 man-db mysql-common pkg-config po-debconf poppler-data rdfind sqlite3 symlinks t1utils tex-common texinfo texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-recommended ucf x11-common xdg-utils zlib1g-dev Suggested packages: gnu-standards autoconf-doc bison-doc wamerican | wordlist whois vacation dh-make doxygen-latex doxygen-doc doxygen-gui gettext-doc libasprintf-dev libgettextpo-dev ghostscript-x clisp gsfonts graphviz-doc groff cups-common libgd-tools gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html krb5-doc krb5-user sqlite3-doc libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools m4-doc apparmor less www-browser libmail-box-perl poppler-utils fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum texlive-generic-recommended texinfo-doc-nonfree perl-tk xpdf-reader | pdf-viewer texlive-fonts-recommended-doc texlive-latex-base-doc texlive-latex-recommended-doc texlive-pstricks Recommended packages: curl | wget | lynx gsfonts fonts-liberation libcupsfilters1 dbus libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs fonts-droid-fallback libgts-bin krb5-locales libltdl-dev libwww-perl libxml-sax-expat-perl libmail-sendmail-perl lmodern tex-gyre tipa libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf autoconf-archive automake autopoint autotools-dev bc bison bsdmainutils debhelper default-libmysqlclient-dev dh-autoreconf dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gettext gettext-base ghostscript gnulib gperf graphviz groff-base help2man intltool-debian libarchive-zip-perl libavahi-client3 libavahi-common-data libavahi-common3 libbison-dev libbrotli1 libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-7 libcroco3 libcups2 libcupsimage2 libdatrie1 libdbus-1-3 libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgsl-dev libgsl23 libgslcblas0 libgssapi-krb5-2 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz-icu0 libharfbuzz0b libice6 libicu63 libijs-0.35 libjbig0 libjbig2dec0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblab-gamut1 libllvm7 liblocale-gettext-perl libltdl7 libmagic-mgc libmagic1 libmysqlclient-dev libmysqlclient20 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpathplan4 libpipeline1 libpixman-1-0 libpotrace0 libptexenc1 libsigsegv2 libsm6 libsqlite3-dev libsynctex2 libteckit0 libtexlua52 libtexlua53 libtexluajit2 libtext-unidecode-perl libthai-data libthai0 libtiff5 libtool libwebp6 libwoff1 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml2 libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzzip-0-13 m4 man-db mysql-common pkg-config po-debconf poppler-data rdfind sbuild-build-depends-apophenia-dummy sqlite3 symlinks t1utils tex-common texinfo texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-recommended ucf x11-common xdg-utils zlib1g-dev 0 upgraded, 154 newly installed, 0 to remove and 0 not upgraded. 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amd64 autopoint all 0.19.8.1-9 [412 kB] Get:44 http://ftpmaster.internal/ubuntu disco/main amd64 bc amd64 1.07.1-2 [86.2 kB] Get:45 http://ftpmaster.internal/ubuntu disco/main amd64 libbison-dev amd64 2:3.2.2.dfsg-1 [343 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main amd64 bison amd64 2:3.2.2.dfsg-1 [268 kB] Get:47 http://ftpmaster.internal/ubuntu disco/main amd64 libtool all 2.4.6-6 [195 kB] Get:48 http://ftpmaster.internal/ubuntu disco/main amd64 dh-autoreconf all 19 [16.1 kB] Get:49 http://ftpmaster.internal/ubuntu disco/main amd64 libarchive-zip-perl all 1.64-1 [84.9 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main amd64 libfile-stripnondeterminism-perl all 1.0.0-1 [13.9 kB] Get:51 http://ftpmaster.internal/ubuntu disco/main amd64 dh-strip-nondeterminism all 1.0.0-1 [5064 B] Get:52 http://ftpmaster.internal/ubuntu disco/main amd64 dwz amd64 0.12-3 [78.1 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main amd64 libcroco3 amd64 0.6.12-3 [81.4 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main amd64 gettext amd64 0.19.8.1-9 [896 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main amd64 intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:56 http://ftpmaster.internal/ubuntu disco/main amd64 po-debconf all 1.0.21 [233 kB] Get:57 http://ftpmaster.internal/ubuntu disco/main amd64 debhelper all 11.5.3ubuntu1 [888 kB] Get:58 http://ftpmaster.internal/ubuntu disco/main amd64 mysql-common all 5.8+1.0.5 [7352 B] Get:59 http://ftpmaster.internal/ubuntu disco/main amd64 libmysqlclient20 amd64 5.7.24-2 [808 kB] Get:60 http://ftpmaster.internal/ubuntu disco/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-0ubuntu2 [176 kB] Get:61 http://ftpmaster.internal/ubuntu disco/main amd64 libmysqlclient-dev amd64 5.7.24-2 [1155 kB] Get:62 http://ftpmaster.internal/ubuntu disco/main amd64 default-libmysqlclient-dev amd64 1.0.5 [3792 B] Get:63 http://ftpmaster.internal/ubuntu disco/main amd64 libllvm7 amd64 1:7.0.1-4 [13.0 MB] Get:64 http://ftpmaster.internal/ubuntu disco/universe amd64 libclang1-7 amd64 1:7.0.1-4 [5966 kB] Get:65 http://ftpmaster.internal/ubuntu disco/main amd64 libxapian30 amd64 1.4.9-1 [672 kB] Get:66 http://ftpmaster.internal/ubuntu disco/universe amd64 doxygen amd64 1.8.13-10ubuntu1 [3944 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main amd64 libfreetype6 amd64 2.8.1-2ubuntu2 [335 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main amd64 fonts-dejavu-core all 2.37-1 [1041 kB] Get:69 http://ftpmaster.internal/ubuntu disco/main amd64 fontconfig-config all 2.13.0-5ubuntu3 [28.4 kB] Get:70 http://ftpmaster.internal/ubuntu disco/main amd64 libfontconfig1 amd64 2.13.0-5ubuntu3 [112 kB] Get:71 http://ftpmaster.internal/ubuntu disco/main amd64 fontconfig amd64 2.13.0-5ubuntu3 [170 kB] Get:72 http://ftpmaster.internal/ubuntu disco/main amd64 fonts-lmodern all 2.004.5-5 [4532 kB] Get:73 http://ftpmaster.internal/ubuntu disco/main amd64 libavahi-common-data amd64 0.7-4ubuntu4 [21.4 kB] Get:74 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disco/main amd64 libxml-libxml-perl amd64 2.0132+dfsg-2build1 [319 kB] Get:95 http://ftpmaster.internal/ubuntu disco/universe amd64 texinfo amd64 6.5.0.dfsg.1-4build1 [848 kB] Get:96 http://ftpmaster.internal/ubuntu disco/universe amd64 gnulib all 20140202+stable-3 [3510 kB] Get:97 http://ftpmaster.internal/ubuntu disco/universe amd64 libcdt5 amd64 2.40.1-5build2 [19.1 kB] Get:98 http://ftpmaster.internal/ubuntu disco/universe amd64 libcgraph6 amd64 2.40.1-5build2 [40.7 kB] Get:99 http://ftpmaster.internal/ubuntu disco/main amd64 libxpm4 amd64 1:3.5.12-1 [34.0 kB] Get:100 http://ftpmaster.internal/ubuntu disco/main amd64 libgd3 amd64 2.2.5-5 [118 kB] Get:101 http://ftpmaster.internal/ubuntu disco/universe amd64 libgts-0.7-5 amd64 0.7.6+darcs121130-4 [150 kB] Get:102 http://ftpmaster.internal/ubuntu disco/main amd64 libpixman-1-0 amd64 0.36.0-1 [229 kB] Get:103 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-render0 amd64 1.13.1-2 [14.8 kB] Get:104 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libpangoft2-1.0-0 amd64 1.42.4-6 [35.6 kB] Get:115 http://ftpmaster.internal/ubuntu disco/main amd64 libpangocairo-1.0-0 amd64 1.42.4-6 [23.2 kB] Get:116 http://ftpmaster.internal/ubuntu disco/universe amd64 libpathplan4 amd64 2.40.1-5build2 [21.9 kB] Get:117 http://ftpmaster.internal/ubuntu disco/universe amd64 libgvc6 amd64 2.40.1-5build2 [600 kB] Get:118 http://ftpmaster.internal/ubuntu disco/universe amd64 libgvpr2 amd64 2.40.1-5build2 [169 kB] Get:119 http://ftpmaster.internal/ubuntu disco/universe amd64 liblab-gamut1 amd64 2.40.1-5build2 [178 kB] Get:120 http://ftpmaster.internal/ubuntu disco/main amd64 libxt6 amd64 1:1.1.5-1 [160 kB] Get:121 http://ftpmaster.internal/ubuntu disco/main amd64 libxmu6 amd64 2:1.1.2-2 [46.0 kB] Get:122 http://ftpmaster.internal/ubuntu disco/main amd64 libxaw7 amd64 2:1.0.13-1 [173 kB] Get:123 http://ftpmaster.internal/ubuntu disco/universe amd64 graphviz amd64 2.40.1-5build2 [559 kB] Get:124 http://ftpmaster.internal/ubuntu disco/universe amd64 help2man amd64 1.47.8 [169 kB] Get:125 http://ftpmaster.internal/ubuntu disco/main amd64 libbrotli1 amd64 1.0.7-2 [268 kB] Get:126 http://ftpmaster.internal/ubuntu disco/universe amd64 libgslcblas0 amd64 2.5+dfsg-6 [84.1 kB] Get:127 http://ftpmaster.internal/ubuntu disco/universe amd64 libgsl23 amd64 2.5+dfsg-6 [854 kB] Get:128 http://ftpmaster.internal/ubuntu disco/universe amd64 libgsl-dev amd64 2.5+dfsg-6 [1064 kB] Get:129 http://ftpmaster.internal/ubuntu disco/main amd64 libharfbuzz-icu0 amd64 2.3.0-1 [5460 B] Get:130 http://ftpmaster.internal/ubuntu disco/main amd64 libkpathsea6 amd64 2018.20181218.49446-1 [56.1 kB] Get:131 http://ftpmaster.internal/ubuntu disco/main amd64 libpaper-utils amd64 1.1.26 [8320 B] Get:132 http://ftpmaster.internal/ubuntu disco/main amd64 libpotrace0 amd64 1.15-1 [17.5 kB] Get:133 http://ftpmaster.internal/ubuntu disco/main amd64 libptexenc1 amd64 2018.20181218.49446-1 [35.2 kB] Get:134 http://ftpmaster.internal/ubuntu disco/main amd64 libsqlite3-dev amd64 3.26.0-3 [673 kB] Get:135 http://ftpmaster.internal/ubuntu disco/main amd64 libsynctex2 amd64 2018.20181218.49446-1 [54.0 kB] Get:136 http://ftpmaster.internal/ubuntu disco/main amd64 libteckit0 amd64 2.5.8+ds2-5ubuntu1 [317 kB] Get:137 http://ftpmaster.internal/ubuntu disco/main amd64 libtexlua52 amd64 2018.20181218.49446-1 [90.2 kB] Get:138 http://ftpmaster.internal/ubuntu disco/main amd64 libtexlua53 amd64 2018.20181218.49446-1 [103 kB] Get:139 http://ftpmaster.internal/ubuntu disco/main amd64 libtexluajit2 amd64 2018.20181218.49446-1 [234 kB] Get:140 http://ftpmaster.internal/ubuntu disco/main amd64 libwoff1 amd64 1.0.2-1build1 [42.1 kB] Get:141 http://ftpmaster.internal/ubuntu disco/main amd64 libxi6 amd64 2:1.7.9-1 [29.2 kB] Get:142 http://ftpmaster.internal/ubuntu disco/main amd64 libxxhash0 amd64 0.6.5-2 [7180 B] Get:143 http://ftpmaster.internal/ubuntu disco/main amd64 libzzip-0-13 amd64 0.13.62-3.1ubuntu1 [26.0 kB] Get:144 http://ftpmaster.internal/ubuntu disco/main amd64 pkg-config amd64 0.29.1-0ubuntu2 [45.0 kB] Get:145 http://ftpmaster.internal/ubuntu disco/main amd64 sqlite3 amd64 3.26.0-3 [806 kB] Get:146 http://ftpmaster.internal/ubuntu disco/universe amd64 symlinks amd64 1.4-3build1 [10.8 kB] Get:147 http://ftpmaster.internal/ubuntu disco/main amd64 t1utils amd64 1.41-3 [56.1 kB] Get:148 http://ftpmaster.internal/ubuntu disco/main amd64 texlive-binaries amd64 2018.20181218.49446-1 [11.5 MB] Get:149 http://ftpmaster.internal/ubuntu disco/main amd64 xdg-utils all 1.1.3-1ubuntu2 [60.5 kB] Get:150 http://ftpmaster.internal/ubuntu disco/main amd64 texlive-base all 2018.20181214-1 [19.4 MB] Get:151 http://ftpmaster.internal/ubuntu disco/universe amd64 texlive-fonts-recommended all 2018.20181214-1 [5265 kB] Get:152 http://ftpmaster.internal/ubuntu disco/main amd64 texlive-latex-base all 2018.20181214-1 [956 kB] Get:153 http://ftpmaster.internal/ubuntu disco/main amd64 texlive-latex-recommended all 2018.20181214-1 [15.3 MB] Get:154 http://ftpmaster.internal/ubuntu disco/universe amd64 rdfind amd64 1.4.1-1 [37.7 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 129 MB in 4s (33.0 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 13710 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-3build3_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3build3) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../001-libxau6_1%3a1.0.8-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.8-1) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../002-libbsd0_0.9.1-1_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../003-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../004-libxcb1_1.13.1-2_amd64.deb ... Unpacking libxcb1:amd64 (1.13.1-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../005-libx11-data_2%3a1.6.7-1_all.deb ... Unpacking libx11-data (2:1.6.7-1) ... 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Setting up libjbig0:amd64 (2.1-3.1build1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up poppler-data (0.4.9-2) ... Setting up rdfind (1.4.1-1) ... Setting up libelf1:amd64 (0.175-1) ... Setting up groff-base (1.22.3-10) ... Setting up libglib2.0-0:amd64 (2.58.1-2) ... No schema files found: doing nothing. Setting up mysql-common (5.8+1.0.5) ... update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libtexlua53:amd64 (2018.20181218.49446-1) ... Setting up libtext-unidecode-perl (1.30-1) ... Setting up libdatrie1:amd64 (0.2.12-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libsynctex2:amd64 (2018.20181218.49446-1) ... Setting up libjpeg-turbo8:amd64 (2.0.0-0ubuntu2) ... Setting up libpipeline1:amd64 (1.5.0-2) ... Setting up gperf (3.1-1) ... Setting up m4 (1.4.18-2) ... Setting up libxxhash0:amd64 (0.6.5-2) ... Setting up libbsd0:amd64 (0.9.1-1) ... 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Setting up libfribidi0:amd64 (1.0.5-3) ... Setting up liblocale-gettext-perl (1.07-3build3) ... Setting up libpotrace0:amd64 (1.15-1) ... Setting up libmysqlclient20:amd64 (5.7.24-2) ... Setting up libteckit0:amd64 (2.5.8+ds2-5ubuntu1) ... Setting up libthai-data (0.1.28-1) ... Setting up bison (2:3.2.2.dfsg-1) ... update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libkeyutils1:amd64 (1.5.9-9.3) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up bc (1.07.1-2) ... Setting up x11-common (1:7.7+19ubuntu8) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libzzip-0-13:amd64 (0.13.62-3.1ubuntu1) ... Setting up libgslcblas0:amd64 (2.5+dfsg-6) ... Setting up xdg-utils (1.1.3-1ubuntu2) ... Setting up libtexluajit2:amd64 (2018.20181218.49446-1) ... Setting up libcdt5 (2.40.1-5build2) ... Setting up libx11-data (2:1.6.7-1) ... Setting up libxau6:amd64 (1:1.0.8-1) ... Setting up autopoint (0.19.8.1-9) ... Setting up libdbus-1-3:amd64 (1.12.10-1ubuntu2) ... Setting up fonts-lmodern (2.004.5-5) ... Setting up libavahi-common-data:amd64 (0.7-4ubuntu4) ... Setting up libcgraph6 (2.40.1-5build2) ... Setting up libwebp6:amd64 (0.6.1-2) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-0ubuntu2) ... Setting up libfile-stripnondeterminism-perl (1.0.0-1) ... Setting up libxml-sax-perl (1.00+dfsg-1.1~build1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libjpeg8:amd64 (8c-2ubuntu8) ... Setting up libedit2:amd64 (3.1-20181209-1) ... Setting up libpaper1:amd64 (1.1.26) ... Creating config file /etc/papersize with new version Setting up libgts-0.7-5:amd64 (0.7.6+darcs121130-4) ... Setting up libk5crypto3:amd64 (1.16.1-1ubuntu1) ... Setting up libpaper-utils (1.1.26) ... Setting up fontconfig-config (2.13.0-5ubuntu3) ... Setting up tex-common (6.10) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libmysqlclient-dev (5.7.24-2) ... Setting up libgsl23:amd64 (2.5+dfsg-6) ... Setting up gettext (0.19.8.1-9) ... Setting up libgsl-dev (2.5+dfsg-6) ... Setting up libgvpr2 (2.40.1-5build2) ... Setting up libllvm7:amd64 (1:7.0.1-4) ... Setting up libclang1-7:amd64 (1:7.0.1-4) ... Setting up doxygen (1.8.13-10ubuntu1) ... Setting up libharfbuzz0b:amd64 (2.3.0-1) ... Setting up libtiff5:amd64 (4.0.10-3) ... Setting up autoconf (2.69-11) ... Setting up libthai0:amd64 (0.1.28-1) ... Setting up file (1:5.34-2) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up help2man (1.47.8) ... Setting up libice6:amd64 (2:1.0.9-2) ... Setting up man-db (2.8.5-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libkrb5-3:amd64 (1.16.1-1ubuntu1) ... Setting up libavahi-common3:amd64 (0.7-4ubuntu4) ... Setting up default-libmysqlclient-dev:amd64 (1.0.5) ... Setting up libxml-libxml-perl (2.0132+dfsg-2build1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxcb1:amd64 (1.13.1-2) ... Setting up libtool (2.4.6-6) ... Setting up libfontconfig1:amd64 (2.13.0-5ubuntu3) ... Setting up libsm6:amd64 (2:1.2.2-1) ... Setting up libxcb-render0:amd64 (1.13.1-2) ... Setting up libharfbuzz-icu0:amd64 (2.3.0-1) ... Setting up po-debconf (1.0.21) ... Setting up libx11-6:amd64 (2:1.6.7-1) ... Setting up libgssapi-krb5-2:amd64 (1.16.1-1ubuntu1) ... Setting up libxcb-shm0:amd64 (1.13.1-2) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libxt6:amd64 (1:1.1.5-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libavahi-client3:amd64 (0.7-4ubuntu4) ... Setting up texinfo (6.5.0.dfsg.1-4build1) ... Running mktexlsr. This may take some time. ... done. Setting up fontconfig (2.13.0-5ubuntu3) ... Regenerating fonts cache... done. Setting up libcups2:amd64 (2.2.10-3) ... Setting up libxext6:amd64 (2:1.3.3-1) ... Setting up libgd3:amd64 (2.2.5-5) ... Setting up libxmu6:amd64 (2:1.1.2-2) ... Setting up gnulib (20140202+stable-3) ... Setting up libcupsimage2:amd64 (2.2.10-3) ... Setting up libpango-1.0-0:amd64 (1.42.4-6) ... Setting up libgs9:amd64 (9.26~dfsg+0-0ubuntu3) ... Setting up libxi6:amd64 (2:1.7.9-1) ... Setting up libxaw7:amd64 (2:1.0.13-1) ... Setting up libcairo2:amd64 (1.16.0-1) ... Setting up ghostscript (9.26~dfsg+0-0ubuntu3) ... Setting up texlive-binaries (2018.20181218.49446-1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up libpangoft2-1.0-0:amd64 (1.42.4-6) ... Setting up texlive-base (2018.20181214-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex tl-paper: setting paper size for dvipdfmx to letter: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for dvips to letter: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for pdftex to letter: /var/lib/texmf/tex/generic/config/pdftexconfig.tex tl-paper: setting paper size for xdvi to letter: /var/lib/texmf/xdvi/XDvi-paper Setting up texlive-fonts-recommended (2018.20181214-1) ... Setting up texlive-latex-base (2018.20181214-1) ... Setting up texlive-latex-recommended (2018.20181214-1) ... Setting up libpangocairo-1.0-0:amd64 (1.42.4-6) ... Setting up libgvc6 (2.40.1-5build2) ... Setting up graphviz (2.40.1-5build2) ... Setting up debhelper (11.5.3ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.0.0-1) ... Setting up sbuild-build-depends-apophenia-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Processing triggers for systemd (239-7ubuntu15) ... Processing triggers for tex-common (6.10) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-141-generic amd64 (x86_64) Toolchain package versions: binutils_2.31.1-11ubuntu1 dpkg-dev_1.19.2ubuntu2 g++-8_8.2.0-13ubuntu1 g++-9_9-20190102-0ubuntu2 gcc-8_8.2.0-13ubuntu1 gcc-9_9-20190102-0ubuntu2 libc6-dev_2.28-0ubuntu1 libstdc++-8-dev_8.2.0-13ubuntu1 libstdc++-9-dev_9-20190102-0ubuntu2 libstdc++6_9-20190102-0ubuntu2 linux-libc-dev_4.18.0-11.12 Package versions: adduser_3.117ubuntu1 advancecomp_2.1-1 apt_1.8.0~alpha2ubuntu1 autoconf_2.69-11 autoconf-archive_20180313-1 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1ubuntu8 base-passwd_3.5.45 bash_4.4.18-2ubuntu3 bc_1.07.1-2 binutils_2.31.1-11ubuntu1 binutils-common_2.31.1-11ubuntu1 binutils-x86-64-linux-gnu_2.31.1-11ubuntu1 bison_2:3.2.2.dfsg-1 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libgnutls30_3.6.5-2ubuntu1 libgomp1_9-20190102-0ubuntu2 libgpg-error0_1.32-3 libgraphite2-3_1.3.12-1 libgs9_9.26~dfsg+0-0ubuntu3 libgs9-common_9.26~dfsg+0-0ubuntu3 libgsl-dev_2.5+dfsg-6 libgsl23_2.5+dfsg-6 libgslcblas0_2.5+dfsg-6 libgssapi-krb5-2_1.16.1-1ubuntu1 libgts-0.7-5_0.7.6+darcs121130-4 libgvc6_2.40.1-5build2 libgvpr2_2.40.1-5build2 libharfbuzz-icu0_2.3.0-1 libharfbuzz0b_2.3.0-1 libhogweed4_3.4.1~rc1-1 libice6_2:1.0.9-2 libicu63_63.1-5 libidn11_1.33-2.2ubuntu1 libidn2-0_2.0.5-1 libijs-0.35_0.35-13 libip4tc0_1.6.1-2ubuntu3 libisl19_0.20-2 libitm1_9-20190102-0ubuntu2 libjbig0_2.1-3.1build1 libjbig2dec0_0.15-2 libjpeg-turbo8_2.0.0-0ubuntu2 libjpeg8_8c-2ubuntu8 libjson-c3_0.12.1-1.3 libk5crypto3_1.16.1-1ubuntu1 libkeyutils1_1.5.9-9.3 libkmod2_25-1ubuntu2 libkpathsea6_2018.20181218.49446-1 libkrb5-3_1.16.1-1ubuntu1 libkrb5support0_1.16.1-1ubuntu1 liblab-gamut1_2.40.1-5build2 libllvm7_1:7.0.1-4 liblocale-gettext-perl_1.07-3build3 liblockfile-bin_1.14-1.1 liblockfile1_1.14-1.1 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libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libslang2_2.3.2-1ubuntu1 libsm6_2:1.2.2-1 libsmartcols1_2.32-0.1ubuntu2 libsqlite3-0_3.26.0-3 libsqlite3-dev_3.26.0-3 libss2_1.44.5-1 libssl1.1_1.1.1a-1ubuntu2 libstdc++-8-dev_8.2.0-13ubuntu1 libstdc++-9-dev_9-20190102-0ubuntu2 libstdc++6_9-20190102-0ubuntu2 libsynctex2_2018.20181218.49446-1 libsystemd0_239-7ubuntu15 libtasn1-6_4.13-3 libteckit0_2.5.8+ds2-5ubuntu1 libtexlua52_2018.20181218.49446-1 libtexlua53_2018.20181218.49446-1 libtexluajit2_2018.20181218.49446-1 libtext-unidecode-perl_1.30-1 libthai-data_0.1.28-1 libthai0_0.1.28-1 libtiff5_4.0.10-3 libtinfo6_6.1+20180210-4ubuntu1 libtool_2.4.6-6 libtsan0_9-20190102-0ubuntu2 libubsan1_9-20190102-0ubuntu2 libudev1_239-7ubuntu15 libunistring2_0.9.10-1ubuntu1 libusb-0.1-4_2:0.1.12-32 libuuid1_2.32-0.1ubuntu2 libwebp6_0.6.1-2 libwoff1_1.0.2-1build1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxapian30_1.4.9-1 libxau6_1:1.0.8-1 libxaw7_2:1.0.13-1 libxcb-render0_1.13.1-2 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poppler-data_0.4.9-2 procps_2:3.3.15-2ubuntu1 rdfind_1.4.1-1 readline-common_7.0-5 sbuild-build-depends-apophenia-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sqlite3_3.26.0-3 symlinks_1.4-3build1 systemd_239-7ubuntu15 systemd-sysv_239-7ubuntu15 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 t1utils_1.41-3 tar_1.30+dfsg-4 tex-common_6.10 texinfo_6.5.0.dfsg.1-4build1 texlive-base_2018.20181214-1 texlive-binaries_2018.20181218.49446-1 texlive-fonts-recommended_2018.20181214-1 texlive-latex-base_2018.20181214-1 texlive-latex-recommended_2018.20181214-1 tzdata_2018i-1 ubuntu-keyring_2018.09.18.1 ucf_3.0038 util-linux_2.32-0.1ubuntu2 x11-common_1:7.7+19ubuntu8 xdg-utils_1.1.3-1ubuntu2 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 zlib1g-dev_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Sun Aug 6 00:25:22 2017 UTC gpgv: using RSA key BD7EAA60778FA6F5 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./apophenia_1.0+ds-7build1.dsc dpkg-source: info: extracting apophenia in apophenia-1.0+ds dpkg-source: info: unpacking apophenia_1.0+ds.orig.tar.gz dpkg-source: info: unpacking apophenia_1.0+ds-7build1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying upstream-bug-793998-tests_distribution_tests-2.patch dpkg-source: info: applying upstream-fix-typo.patch dpkg-source: info: applying upstream-enhancement-eg_test_updating.patch dpkg-source: info: applying upstream-correction-spelling-error-in-source.patch dpkg-source: info: applying debianization.patch dpkg-source: info: applying debianization-help2man.patch dpkg-source: info: applying debianization-documentation.patch dpkg-source: info: applying debianization-bug-597187_757967_841636-mysql_config.patch dpkg-source: info: applying debianization-adhoc.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-15900740 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-15900740 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-15900740 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package apophenia dpkg-buildpackage: info: source version 1.0+ds-7build1 dpkg-buildpackage: info: source distribution artful dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from apophenia-1.0+ds/debian/source/options: --compression=xz --compression-level=9 fakeroot debian/rules clean dh clean --with autoreconf --builddirectory=_build --parallel dh_auto_clean -O--builddirectory=_build -O--parallel dh_autoreconf_clean -O--builddirectory=_build -O--parallel dh_clean -O--builddirectory=_build -O--parallel debian/rules build dh build --with autoreconf --builddirectory=_build --parallel dh_update_autotools_config -O--builddirectory=_build -O--parallel dh_autoreconf -O--builddirectory=_build -O--parallel aclocal: warning: couldn't open directory 'm4': No such file or directory libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-aux'. libtoolize: copying file 'build-aux/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:19: installing 'build-aux/compile' configure.ac:19: installing 'build-aux/config.guess' configure.ac:19: installing 'build-aux/config.sub' configure.ac:12: installing 'build-aux/install-sh' configure.ac:12: installing 'build-aux/missing' Makefile.am: installing 'build-aux/depcomp' cmd/Makefile.am:27: warning: '%'-style pattern rules are a GNU make extension docs/Makefile.am:84: warning: '%'-style pattern rules are a GNU make extension automake: warning: source file '$(top_builddir)/eg/apop_map_row.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/apop_map_row' automake: warning: possible forward-incompatibility. automake: At least a source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, automake: this behaviour will change in future Automake versions: they will automake: unconditionally cause object files to be placed in the same subdirectory automake: of the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. automake: warning: source file '$(top_builddir)/eg/binning.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/binning' automake: warning: source file '$(top_builddir)/eg/boot_clt.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/boot_clt' automake: warning: source file '$(top_builddir)/eg/cross_models.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/cross_models' automake: warning: source file '$(top_builddir)/eg/data_fill.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/data_fill' automake: warning: source file '$(top_builddir)/eg/db_fns.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/db_fns' automake: warning: source file '$(top_builddir)/eg/dconstrain.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/dconstrain' automake: warning: source file '$(top_builddir)/eg/dot_products.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/dot_products' automake: warning: source file '$(top_builddir)/eg/draw_to_db.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/draw_to_db' automake: warning: source file '$(top_builddir)/eg/entropy_model.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/entropy_model' automake: warning: source file '$(top_builddir)/eg/entropy_vector.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/entropy_vector' automake: warning: source file '$(top_builddir)/eg/f_test.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/f_test' automake: warning: source file '$(top_builddir)/eg/fake_logit.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/fake_logit' automake: warning: source file '$(top_builddir)/eg/fix_params.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/fix_params' automake: warning: source file '$(top_builddir)/eg/hills2.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/hills2' automake: warning: source file '$(top_builddir)/eg/iv.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/iv' automake: warning: source file '$(top_builddir)/eg/jack.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/jack' automake: warning: source file '$(top_builddir)/eg/jacobian.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/jacobian' automake: warning: source file '$(top_builddir)/eg/ks_tests.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/ks_tests' automake: warning: source file '$(top_builddir)/eg/logit.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/logit' automake: warning: source file '$(top_builddir)/eg/ml_imputation.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/ml_imputation' automake: warning: source file '$(top_builddir)/eg/normalization_demo.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/normalization_demo' automake: warning: source file '$(top_builddir)/eg/ols.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/ols' automake: warning: source file '$(top_builddir)/eg/ols_oneliner.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/ols_oneliner' automake: warning: source file '$(top_builddir)/eg/parameterization.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/parameterization' automake: warning: source file '$(top_builddir)/eg/pmf_test.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/pmf_test' automake: warning: source file '$(top_builddir)/eg/simple_subsets.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/simple_subsets' automake: warning: source file '$(top_builddir)/eg/some_cdfs.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/some_cdfs' automake: warning: source file '$(top_builddir)/eg/t_test_by_rows.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/t_test_by_rows' automake: warning: source file '$(top_builddir)/eg/test_distances.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_distances' automake: warning: source file '$(top_builddir)/eg/test_fisher.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_fisher' automake: warning: source file '$(top_builddir)/eg/test_harmonic.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_harmonic' automake: warning: source file '$(top_builddir)/eg/test_kl_divergence.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/test_kl_divergence' automake: warning: source file '$(top_builddir)/eg/test_pruning.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_pruning' automake: warning: source file '$(top_builddir)/eg/test_ranks.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/test_ranks' automake: warning: source file '$(top_builddir)/eg/test_regex.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_regex' automake: warning: source file '$(top_builddir)/eg/test_updating.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/test_updating' automake: warning: source file '$(top_builddir)/eg/transform.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/transform' parallel-tests: installing 'build-aux/test-driver' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/apophenia-1.0+ds' dh_auto_configure -- --enable-maintainer-mode cd _build && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --enable-maintainer-mode checking whether make supports nested variables... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether to enable maintainer-specific portions of Makefiles... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking if LD -Wl,--version-script works... yes checking for help2man... /usr/bin/help2man checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) none checking for gcc option to accept ISO C99... none needed checking whether gcc is Clang... no checking whether pthreads work with -pthread... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking whether more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking for gcc option to support OpenMP... -fopenmp checking for cos in -lm... yes checking for gsl-config... /usr/bin/gsl-config checking for GSL - version >= 1.12.0... yes checking for mysql_config... /usr/bin/mysql_config checking for SQLite3 library >= 3.0.0... yes checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking for ANSI C header files... (cached) yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdint.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for unistd.h... (cached) yes checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for size_t... (cached) yes checking whether struct tm is in sys/time.h or time.h... time.h checking for ptrdiff_t... yes checking for __attribute__... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking for working strtod... yes checking for floor... no checking for memset... yes checking for pow... no checking for regcomp... yes checking for sqrt... no checking for strcasecmp... yes checking for asprintf... yes checking for bc... /usr/bin/bc checking for sqlite3... /usr/bin/sqlite3 checking whether to run extended tests... no dpkg-parsechangelog: error: cannot open file debian/changelog: No such file or directory checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating apophenia.pc config.status: creating apop.h config.status: creating Makefile config.status: creating transform/Makefile config.status: creating model/Makefile config.status: creating cmd/Makefile config.status: creating tests/Makefile config.status: creating docs/doxygen.conf config.status: creating docs/Makefile config.status: creating eg/Makefile config.status: creating tests/utilities_test config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/<>/apophenia-1.0+ds' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/<>/apophenia-1.0+ds' /usr/bin/make -C _build/docs doc make[2]: Entering directory '/<>/apophenia-1.0+ds/_build/docs' cat ../../model/apop_uniform.c ../../model/apop_kerneld.c ../../model/apop_exponential.c ../../model/apop_poisson.c ../../model/apop_wishart.c ../../model/apop_multinomial.c ../../model/apop_bernoulli.c ../../model/apop_dirichlet.c ../../model/apop_gamma.c ../../model/apop_yule.c ../../model/apop_pmf.c ../../model/apop_normal.c ../../model/apop_loess.c ../../model/apop_multivariate_normal.c ../../model/apop_beta.c ../../model/apop_t.c ../../model/apop_probit.c ../../model/apop_zipf.c ../../model/apop_ols.c ../../transform/apop_coordinate_transform.c ../../transform/apop_fix_params.c ../../transform/apop_mixture.c ../../transform/apop_cross.c ../../transform/apop_dconstrain.c | awk -f ../../docs/make_model_doc.awk > model_doc.h /usr/bin/dot -Tpng < ../../docs/structs.dot > structs.png /bin/mkdir -p include sed -e 's/__attribute.*;/;/;s/extern //' ../apop.h > include/apop.h doxygen doxygen.conf This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=latex) restricted \write18 enabled. entering extended mode (./_formulas.tex LaTeX2e <2018-12-01> for f in flake.gif search.gif right.png down.png tree.js ; do \ test -f ../../docs/$f && cp ../../docs/$f html/ ;\ done cp structs.png html/ sed -i -f ../../docs/edit_outline.sed html/index.html html/outline.html sed -i -f ../../docs/edit_group.sed html/group__models.html sed -i -f ../../docs/edit_width.sed html/*.html /<>/apophenia-1.0+ds/_build/../docs/adjust sed: can't read latex/Makefile: No such file or directory sed: can't read latex/refman.tex: No such file or directory sed: can't read latex/refman.tex: No such file or directory sed: can't read latex/refman.tex: No such file or directory sed: can't read latex/refman.tex: No such file or directory sed: can't read latex/Makefile: No such file or directory sed: couldn't open file edit_group.sed: No such file or directory sed: can't read latex/group__models.tex: No such file or directory grep: latex/group__all__public.tex: No such file or directory sed: -e expression #1, char 37: unexpected `,' sed: can't read latex/*tex: No such file or directory sed: can't read latex/*tex: No such file or directory sed: can't read latex/*tex: No such file or directory sed: can't read latex/doxygen.sty: No such file or directory sed: can't read latex/doxygen.sty: No such file or directory sed: can't read latex/doxygen.sty: No such file or directory rdfind -outputname /dev/null -makesymlinks true html Now scanning "html", found 470 files. Now have 470 files in total. Removed 0 files due to nonunique device and inode. Total size is 3519406 bytes or 3 MiB Removed 281 files due to unique sizes from list.189 files left. Now eliminating candidates based on first bytes:removed 98 files from list.91 files left. Now eliminating candidates based on last bytes:removed 8 files from list.83 files left. Now eliminating candidates based on sha1 checksum:removed 67 files from list.16 files left. It seems like you have 16 files that are not unique Totally, 3 KiB can be reduced. Now making results file /dev/null Now making symbolic links. creating Making 8 links. symlinks -r -c -s -v html absolute: /<>/apophenia-1.0+ds/_build/docs/html/search/variables_9.js -> /<>/apophenia-1.0+ds/_build/docs/html/search/all_a.js changed: /<>/apophenia-1.0+ds/_build/docs/html/search/variables_9.js -> all_a.js absolute: /<>/apophenia-1.0+ds/_build/docs/html/search/variables_8.js -> /<>/apophenia-1.0+ds/_build/docs/html/search/all_9.js changed: /<>/apophenia-1.0+ds/_build/docs/html/search/variables_8.js -> all_9.js absolute: /<>/apophenia-1.0+ds/_build/docs/html/search/variables_5.js -> /<>/apophenia-1.0+ds/_build/docs/html/search/all_6.js changed: /<>/apophenia-1.0+ds/_build/docs/html/search/variables_5.js -> all_6.js absolute: /<>/apophenia-1.0+ds/_build/docs/html/search/variables_7.js -> /<>/apophenia-1.0+ds/_build/docs/html/search/all_8.js changed: /<>/apophenia-1.0+ds/_build/docs/html/search/variables_7.js -> all_8.js absolute: /<>/apophenia-1.0+ds/_build/docs/html/search/variables_1.js -> /<>/apophenia-1.0+ds/_build/docs/html/search/all_1.js changed: /<>/apophenia-1.0+ds/_build/docs/html/search/variables_1.js -> all_1.js absolute: /<>/apophenia-1.0+ds/_build/docs/html/search/variables_11.js -> /<>/apophenia-1.0+ds/_build/docs/html/search/all_12.js changed: /<>/apophenia-1.0+ds/_build/docs/html/search/variables_11.js -> all_12.js absolute: /<>/apophenia-1.0+ds/_build/docs/html/search/variables_13.js -> /<>/apophenia-1.0+ds/_build/docs/html/search/all_14.js changed: /<>/apophenia-1.0+ds/_build/docs/html/search/variables_13.js -> all_14.js absolute: /<>/apophenia-1.0+ds/_build/docs/html/form_97.png -> /<>/apophenia-1.0+ds/_build/docs/html/form_149.png changed: /<>/apophenia-1.0+ds/_build/docs/html/form_97.png -> form_149.png rm -f html/jquery.js rm -f html/formula.repository rm -f html/_formulas.tex html/_formulas.log make[2]: Leaving directory '/<>/apophenia-1.0+ds/_build/docs' make[1]: Leaving directory '/<>/apophenia-1.0+ds' dh_auto_build -O--builddirectory=_build -O--parallel -Napophenia-doc cd _build && make V=1 -j4 make[1]: Entering directory '/<>/apophenia-1.0+ds/_build' make all-recursive make[2]: Entering directory '/<>/apophenia-1.0+ds/_build' Making all in transform make[3]: Entering directory '/<>/apophenia-1.0+ds/_build/transform' /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_dconstrain.lo `test -f 'apop_dconstrain.c' || echo '../../transform/'`apop_dconstrain.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_fix_params.lo `test -f 'apop_fix_params.c' || echo '../../transform/'`apop_fix_params.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_coordinate_transform.lo `test -f 'apop_coordinate_transform.c' || echo '../../transform/'`apop_coordinate_transform.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_mixture.lo `test -f 'apop_mixture.c' || echo '../../transform/'`apop_mixture.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_mixture.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_mixture.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_fix_params.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_fix_params.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_coordinate_transform.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_coordinate_transform.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_dconstrain.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_dconstrain.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_coordinate_transform.c -o libapoptransform_la-apop_coordinate_transform.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_dconstrain.c -o libapoptransform_la-apop_dconstrain.o >/dev/null 2>&1 ../../transform/apop_fix_params.c: In function ‘apop_model_fix_params’: ../../transform/apop_fix_params.c:266:39: warning: ‘, with some params fixed’ directive output may be truncated writing 24 bytes into a region of size between 0 and 100 [-Wformat-truncation=] 266 | snprintf(model_out->name, 100, "%s, with some params fixed", model_in->name); | ^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/gsl/gsl_errno.h:23, from /usr/include/gsl/gsl_rng.h:24, from ../apop.h:32, from ../../apop_internal.h:83, from ../../transform/apop_fix_params.c:8: /usr/include/x86_64-linux-gnu/bits/stdio2.h:67:10: note: ‘__builtin___snprintf_chk’ output between 25 and 125 bytes into a destination of size 100 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_mixture.c -o libapoptransform_la-apop_mixture.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_fix_params.c -o libapoptransform_la-apop_fix_params.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_cross.lo `test -f 'apop_cross.c' || echo '../../transform/'`apop_cross.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_cross.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_cross.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_cross.c -o libapoptransform_la-apop_cross.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link gcc -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libapoptransform.la libapoptransform_la-apop_dconstrain.lo libapoptransform_la-apop_fix_params.lo libapoptransform_la-apop_coordinate_transform.lo libapoptransform_la-apop_mixture.lo libapoptransform_la-apop_cross.lo libtool: link: ar cru .libs/libapoptransform.a .libs/libapoptransform_la-apop_dconstrain.o .libs/libapoptransform_la-apop_fix_params.o .libs/libapoptransform_la-apop_coordinate_transform.o .libs/libapoptransform_la-apop_mixture.o .libs/libapoptransform_la-apop_cross.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libapoptransform.a libtool: link: ( cd ".libs" && rm -f "libapoptransform.la" && ln -s "../libapoptransform.la" "libapoptransform.la" ) make[3]: Leaving directory '/<>/apophenia-1.0+ds/_build/transform' Making all in model make[3]: Entering directory '/<>/apophenia-1.0+ds/_build/model' /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_bernoulli.lo `test -f 'apop_bernoulli.c' || echo '../../model/'`apop_bernoulli.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_beta.lo `test -f 'apop_beta.c' || echo '../../model/'`apop_beta.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_dirichlet.lo `test -f 'apop_dirichlet.c' || echo '../../model/'`apop_dirichlet.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_exponential.lo `test -f 'apop_exponential.c' || echo '../../model/'`apop_exponential.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_bernoulli.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_bernoulli.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_exponential.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_exponential.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_dirichlet.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_dirichlet.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_beta.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_beta.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_dirichlet.c -o libapopmodel_la-apop_dirichlet.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_bernoulli.c -o libapopmodel_la-apop_bernoulli.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_exponential.c -o libapopmodel_la-apop_exponential.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_beta.c -o libapopmodel_la-apop_beta.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_gamma.lo `test -f 'apop_gamma.c' || echo '../../model/'`apop_gamma.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_gamma.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_gamma.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_kerneld.lo `test -f 'apop_kerneld.c' || echo '../../model/'`apop_kerneld.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_loess.lo `test -f 'apop_loess.c' || echo '../../model/'`apop_loess.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_kerneld.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_kerneld.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_loess.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_loess.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_multinomial.lo `test -f 'apop_multinomial.c' || echo '../../model/'`apop_multinomial.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_multinomial.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_multinomial.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_gamma.c -o libapopmodel_la-apop_gamma.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_kerneld.c -o libapopmodel_la-apop_kerneld.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_multinomial.c -o libapopmodel_la-apop_multinomial.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_multivariate_normal.lo `test -f 'apop_multivariate_normal.c' || echo '../../model/'`apop_multivariate_normal.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_multivariate_normal.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_multivariate_normal.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_normal.lo `test -f 'apop_normal.c' || echo '../../model/'`apop_normal.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_normal.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_normal.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_multivariate_normal.c -o libapopmodel_la-apop_multivariate_normal.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_ols.lo `test -f 'apop_ols.c' || echo '../../model/'`apop_ols.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_ols.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_ols.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_pmf.lo `test -f 'apop_pmf.c' || echo '../../model/'`apop_pmf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c 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|| echo '../../model/'`apop_uniform.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_uniform.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_uniform.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_t.c -o libapopmodel_la-apop_t.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c 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-D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_yule.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_yule.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_zipf.lo `test -f 'apop_zipf.c' || echo '../../model/'`apop_zipf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_zipf.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_zipf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_yule.c -o libapopmodel_la-apop_yule.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_zipf.c -o libapopmodel_la-apop_zipf.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_loess.c -o libapopmodel_la-apop_loess.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link gcc -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libapopmodel.la libapopmodel_la-apop_bernoulli.lo libapopmodel_la-apop_beta.lo libapopmodel_la-apop_dirichlet.lo libapopmodel_la-apop_exponential.lo libapopmodel_la-apop_gamma.lo libapopmodel_la-apop_kerneld.lo libapopmodel_la-apop_loess.lo libapopmodel_la-apop_multinomial.lo libapopmodel_la-apop_multivariate_normal.lo libapopmodel_la-apop_normal.lo libapopmodel_la-apop_ols.lo libapopmodel_la-apop_pmf.lo libapopmodel_la-apop_poisson.lo libapopmodel_la-apop_probit.lo libapopmodel_la-apop_t.lo libapopmodel_la-apop_uniform.lo libapopmodel_la-apop_wishart.lo libapopmodel_la-apop_yule.lo libapopmodel_la-apop_zipf.lo libtool: link: ar cru .libs/libapopmodel.a .libs/libapopmodel_la-apop_bernoulli.o .libs/libapopmodel_la-apop_beta.o .libs/libapopmodel_la-apop_dirichlet.o .libs/libapopmodel_la-apop_exponential.o .libs/libapopmodel_la-apop_gamma.o .libs/libapopmodel_la-apop_kerneld.o .libs/libapopmodel_la-apop_loess.o .libs/libapopmodel_la-apop_multinomial.o .libs/libapopmodel_la-apop_multivariate_normal.o .libs/libapopmodel_la-apop_normal.o .libs/libapopmodel_la-apop_ols.o .libs/libapopmodel_la-apop_pmf.o .libs/libapopmodel_la-apop_poisson.o .libs/libapopmodel_la-apop_probit.o .libs/libapopmodel_la-apop_t.o .libs/libapopmodel_la-apop_uniform.o .libs/libapopmodel_la-apop_wishart.o .libs/libapopmodel_la-apop_yule.o .libs/libapopmodel_la-apop_zipf.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libapopmodel.a libtool: link: ( cd ".libs" && rm -f "libapopmodel.la" && ln -s "../libapopmodel.la" "libapopmodel.la" ) make[3]: Leaving directory '/<>/apophenia-1.0+ds/_build/model' Making all in . make[3]: 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libapopkernel_la-apop_asst.lo `test -f 'apop_asst.c' || echo '../'`apop_asst.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_bootstrap.lo `test -f 'apop_bootstrap.c' || echo '../'`apop_bootstrap.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../asprintf.c -fPIC -DPIC -o .libs/asprintf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c 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/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_conversions.lo `test -f 'apop_conversions.c' || echo '../'`apop_conversions.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_conversions.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_conversions.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_bootstrap.c -o libapopkernel_la-apop_bootstrap.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_arms.c -o libapopkernel_la-apop_arms.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_asst.c -o libapopkernel_la-apop_asst.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_data.lo `test -f 'apop_data.c' || echo '../'`apop_data.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_data.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_data.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_db.lo `test -f 'apop_db.c' || echo '../'`apop_db.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_db.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_db.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_fexact.lo `test -f 'apop_fexact.c' || echo '../'`apop_fexact.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_fexact.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_fexact.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_conversions.c -o libapopkernel_la-apop_conversions.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_hist.lo `test -f 'apop_hist.c' || echo '../'`apop_hist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_data.c -o libapopkernel_la-apop_data.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_hist.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_hist.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_db.c -o libapopkernel_la-apop_db.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_hist.c -o libapopkernel_la-apop_hist.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_linear_algebra.lo `test -f 'apop_linear_algebra.c' || echo '../'`apop_linear_algebra.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_linear_algebra.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_linear_algebra.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_linear_constraint.lo `test -f 'apop_linear_constraint.c' || echo '../'`apop_linear_constraint.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_linear_constraint.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_linear_constraint.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_fexact.c -o libapopkernel_la-apop_fexact.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_mapply.lo `test -f 'apop_mapply.c' || echo '../'`apop_mapply.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mapply.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_mapply.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_linear_algebra.c -o libapopkernel_la-apop_linear_algebra.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_linear_constraint.c -o libapopkernel_la-apop_linear_constraint.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_mcmc.lo `test -f 'apop_mcmc.c' || echo '../'`apop_mcmc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mcmc.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_mcmc.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_missing_data.lo `test -f 'apop_missing_data.c' || echo '../'`apop_missing_data.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_missing_data.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_missing_data.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mapply.c -o libapopkernel_la-apop_mapply.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_missing_data.c -o libapopkernel_la-apop_missing_data.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mcmc.c -o libapopkernel_la-apop_mcmc.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_mle.lo `test -f 'apop_mle.c' || echo '../'`apop_mle.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mle.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_mle.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_model.lo `test -f 'apop_model.c' || echo '../'`apop_model.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_name.lo `test -f 'apop_name.c' || echo '../'`apop_name.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_model.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_model.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_name.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_name.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_name.c -o libapopkernel_la-apop_name.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_model.c -o libapopkernel_la-apop_model.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_output.lo `test -f 'apop_output.c' || echo '../'`apop_output.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mle.c -o libapopkernel_la-apop_mle.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_output.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_output.o ../apop_output.c: In function ‘apop_data_print_core’: ../apop_output.c:260:18: warning: argument 1 null where non-null expected [-Wnonnull] 260 | !strcmp(apop_opts.db_name_column, "row_names")) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ./apop.h:31, from ../apop_internal.h:83, from ../apop_output.c:7: /usr/include/string.h:136:12: note: in a call to function ‘strcmp’ declared here 136 | extern int strcmp (const char *__s1, const char *__s2) | ^~~~~~ /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_rake.lo `test -f 'apop_rake.c' || echo '../'`apop_rake.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_output.c -o libapopkernel_la-apop_output.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_rake.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_rake.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_regression.lo `test -f 'apop_regression.c' || echo '../'`apop_regression.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_regression.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_regression.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_settings.lo `test -f 'apop_settings.c' || echo '../'`apop_settings.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_settings.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_settings.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_sort.lo `test -f 'apop_sort.c' || echo '../'`apop_sort.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_sort.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_sort.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_settings.c -o libapopkernel_la-apop_settings.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_rake.c -o libapopkernel_la-apop_rake.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_regression.c -o libapopkernel_la-apop_regression.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_stats.lo `test -f 'apop_stats.c' || echo '../'`apop_stats.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_stats.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_stats.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_sort.c -o libapopkernel_la-apop_sort.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_tests.lo `test -f 'apop_tests.c' || echo '../'`apop_tests.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_tests.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_tests.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_update.lo `test -f 'apop_update.c' || echo '../'`apop_update.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_vtables.lo `test -f 'apop_vtables.c' || echo '../'`apop_vtables.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_vtables.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_vtables.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_update.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_update.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_vtables.c -o libapopkernel_la-apop_vtables.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_update.c -o libapopkernel_la-apop_update.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_stats.c -o libapopkernel_la-apop_stats.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_tests.c -o libapopkernel_la-apop_tests.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=link gcc -pthread -fopenmp -I/usr/include/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libapopkernel.la libapopkernel_la-apop_arms.lo libapopkernel_la-apop_asst.lo libapopkernel_la-apop_bootstrap.lo libapopkernel_la-apop_conversions.lo libapopkernel_la-apop_data.lo libapopkernel_la-apop_db.lo libapopkernel_la-apop_fexact.lo libapopkernel_la-apop_hist.lo libapopkernel_la-apop_linear_algebra.lo libapopkernel_la-apop_linear_constraint.lo libapopkernel_la-apop_mapply.lo libapopkernel_la-apop_mcmc.lo libapopkernel_la-apop_missing_data.lo libapopkernel_la-apop_mle.lo libapopkernel_la-apop_model.lo libapopkernel_la-apop_name.lo libapopkernel_la-apop_output.lo libapopkernel_la-apop_rake.lo libapopkernel_la-apop_regression.lo libapopkernel_la-apop_settings.lo libapopkernel_la-apop_sort.lo libapopkernel_la-apop_stats.lo libapopkernel_la-apop_tests.lo libapopkernel_la-apop_update.lo libapopkernel_la-apop_vtables.lo libtool: link: ar cru .libs/libapopkernel.a .libs/libapopkernel_la-apop_arms.o .libs/libapopkernel_la-apop_asst.o .libs/libapopkernel_la-apop_bootstrap.o .libs/libapopkernel_la-apop_conversions.o .libs/libapopkernel_la-apop_data.o .libs/libapopkernel_la-apop_db.o .libs/libapopkernel_la-apop_fexact.o .libs/libapopkernel_la-apop_hist.o .libs/libapopkernel_la-apop_linear_algebra.o .libs/libapopkernel_la-apop_linear_constraint.o .libs/libapopkernel_la-apop_mapply.o .libs/libapopkernel_la-apop_mcmc.o .libs/libapopkernel_la-apop_missing_data.o .libs/libapopkernel_la-apop_mle.o .libs/libapopkernel_la-apop_model.o .libs/libapopkernel_la-apop_name.o .libs/libapopkernel_la-apop_output.o .libs/libapopkernel_la-apop_rake.o .libs/libapopkernel_la-apop_regression.o .libs/libapopkernel_la-apop_settings.o .libs/libapopkernel_la-apop_sort.o .libs/libapopkernel_la-apop_stats.o .libs/libapopkernel_la-apop_tests.o .libs/libapopkernel_la-apop_update.o .libs/libapopkernel_la-apop_vtables.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libapopkernel.a libtool: link: ( cd ".libs" && rm -f "libapopkernel.la" && ln -s "../libapopkernel.la" "libapopkernel.la" ) /bin/bash ./libtool --tag=CC --mode=link gcc -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -version-info 2:0:0 -Wl,--version-script=../apophenia.map -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libapophenia.la -rpath /usr/lib/x86_64-linux-gnu asprintf.lo libapopkernel.la transform/libapoptransform.la model/libapopmodel.la -L/usr/lib/x86_64-linux-gnu -lmysqlclient -lpthread -lm -latomic -L/usr/lib -lsqlite3 -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -lm libtool: link: gcc -shared -fPIC -DPIC .libs/asprintf.o -Wl,--whole-archive ./.libs/libapopkernel.a transform/.libs/libapoptransform.a model/.libs/libapopmodel.a -Wl,--no-whole-archive -L/usr/lib/x86_64-linux-gnu -lmysqlclient -lpthread -latomic -L/usr/lib /usr/lib/x86_64-linux-gnu/libsqlite3.so -lgsl -lgslcblas -lm -g -O3 -fstack-protector-strong -fopenmp -Wl,--version-script=../apophenia.map -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -fopenmp -pthread -Wl,-soname -Wl,libapophenia.so.2 -o .libs/libapophenia.so.2.0.0 libtool: link: (cd ".libs" && rm -f "libapophenia.so.2" && ln -s "libapophenia.so.2.0.0" "libapophenia.so.2") libtool: link: (cd ".libs" && rm -f "libapophenia.so" && ln -s "libapophenia.so.2.0.0" "libapophenia.so") libtool: link: (cd .libs/libapophenia.lax/libapopkernel.a && ar x "/<>/apophenia-1.0+ds/_build/./.libs/libapopkernel.a") libtool: link: (cd .libs/libapophenia.lax/libapoptransform.a && ar x "/<>/apophenia-1.0+ds/_build/transform/.libs/libapoptransform.a") libtool: link: (cd .libs/libapophenia.lax/libapopmodel.a && ar x "/<>/apophenia-1.0+ds/_build/model/.libs/libapopmodel.a") libtool: link: ar cru .libs/libapophenia.a asprintf.o 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.libs/libapophenia.lax/libapoptransform.a/libapoptransform_la-apop_dconstrain.o .libs/libapophenia.lax/libapoptransform.a/libapoptransform_la-apop_fix_params.o .libs/libapophenia.lax/libapoptransform.a/libapoptransform_la-apop_mixture.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_bernoulli.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_beta.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_dirichlet.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_exponential.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_gamma.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_kerneld.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_loess.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_multinomial.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_multivariate_normal.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_normal.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_ols.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_pmf.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_poisson.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_probit.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_t.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_uniform.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_wishart.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_yule.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_zipf.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libapophenia.a libtool: link: rm -fr .libs/libapophenia.lax libtool: link: ( cd ".libs" && rm -f "libapophenia.la" && ln -s "../libapophenia.la" "libapophenia.la" ) make[3]: Leaving directory '/<>/apophenia-1.0+ds/_build' Making all in cmd make[3]: Entering directory '/<>/apophenia-1.0+ds/_build/cmd' gcc -DHAVE_CONFIG_H -I. -I../../cmd -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o apop_text_to_db.o ../../cmd/apop_text_to_db.c gcc -DHAVE_CONFIG_H -I. -I../../cmd -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o apop_db_to_crosstab.o ../../cmd/apop_db_to_crosstab.c gcc -DHAVE_CONFIG_H -I. -I../../cmd -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o apop_plot_query.o ../../cmd/apop_plot_query.c /bin/bash ../libtool --tag=CC --mode=link gcc -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o apop_db_to_crosstab apop_db_to_crosstab.o ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm /bin/bash ../libtool --tag=CC --mode=link gcc -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o apop_text_to_db apop_text_to_db.o ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm /bin/bash ../libtool --tag=CC --mode=link gcc -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o apop_plot_query apop_plot_query.o ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm libtool: link: gcc -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/apop_db_to_crosstab apop_db_to_crosstab.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/apop_text_to_db apop_text_to_db.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/apop_plot_query apop_plot_query.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /usr/bin/help2man \ -s 1 \ --manual="Apophenia" --version-string="1.0" --source="Apophenia (Debian )" --libtool --no-info \ -I ../../debian/man/apop_db_to_crosstab.h2m \ -n "command line utility to convert a three-column table to a crosstab" \ -o apop_db_to_crosstab.1 \ ../cmd/apop_db_to_crosstab /usr/bin/help2man \ -s 1 \ --manual="Apophenia" --version-string="1.0" --source="Apophenia (Debian )" --libtool --no-info \ -I ../../debian/man/apop_text_to_db.h2m \ -n "command line utility to convert a text file into a database table" \ -o apop_text_to_db.1 \ ../cmd/apop_text_to_db /usr/bin/help2man \ -s 1 \ --manual="Apophenia" --version-string="1.0" --source="Apophenia (Debian )" --libtool --no-info \ -I ../../debian/man/apop_plot_query.h2m \ -n "command line utility to take in a query and put out a Gnuplot table file" \ -o apop_plot_query.1 \ ../cmd/apop_plot_query make[3]: Leaving directory '/<>/apophenia-1.0+ds/_build/cmd' Making all in eg make[3]: Entering directory '/<>/apophenia-1.0+ds/_build/eg' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/apophenia-1.0+ds/_build/eg' Making all in tests make[3]: Entering directory '/<>/apophenia-1.0+ds/_build/tests' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/apophenia-1.0+ds/_build/tests' Making all in docs make[3]: Entering directory '/<>/apophenia-1.0+ds/_build/docs' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/apophenia-1.0+ds/_build/docs' make[2]: Leaving directory '/<>/apophenia-1.0+ds/_build' make[1]: Leaving directory '/<>/apophenia-1.0+ds/_build' dh_auto_test -O--builddirectory=_build -O--parallel -Napophenia-doc cd _build && make V=1 -j4 check VERBOSE=1 make[1]: Entering directory '/<>/apophenia-1.0+ds/_build' Making check in transform make[2]: Entering directory '/<>/apophenia-1.0+ds/_build/transform' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/apophenia-1.0+ds/_build/transform' Making check in model make[2]: Entering directory '/<>/apophenia-1.0+ds/_build/model' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/apophenia-1.0+ds/_build/model' Making check in . make[2]: Entering directory '/<>/apophenia-1.0+ds/_build' make[2]: Leaving directory '/<>/apophenia-1.0+ds/_build' Making check in cmd make[2]: Entering directory '/<>/apophenia-1.0+ds/_build/cmd' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/apophenia-1.0+ds/_build/cmd' Making check in eg make[2]: Entering directory '/<>/apophenia-1.0+ds/_build/eg' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/apophenia-1.0+ds/_build/eg' Making check in tests make[2]: Entering directory '/<>/apophenia-1.0+ds/_build/tests' make db_tests error_test factors nist_tests sort_example test_apop ../eg/apop_map_row ../eg/binning ../eg/boot_clt ../eg/data_fill ../eg/draw_to_db ../eg/db_fns ../eg/dot_products ../eg/entropy_vector ../eg/iv ../eg/ks_tests ../eg/logit ../eg/fake_logit ../eg/normalization_demo ../eg/ols ../eg/ols_oneliner ../eg/parameterization ../eg/simple_subsets ../eg/t_test_by_rows ../eg/test_distances ../eg/test_fisher ../eg/test_harmonic ../eg/test_pruning ../eg/test_regex make[3]: Entering directory '/<>/apophenia-1.0+ds/_build/tests' gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o db_tests.o ../../tests/db_tests.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o error_test.o ../../tests/error_test.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o factors.o ../../tests/factors.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o nist_tests.o ../../tests/nist_tests.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o sort_example.o ../../tests/sort_example.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_apop.o ../../tests/test_apop.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o apop_map_row.o `test -f '../eg/apop_map_row.c' || echo '../../tests/'`../eg/apop_map_row.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o binning.o `test -f '../eg/binning.c' || echo '../../tests/'`../eg/binning.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o boot_clt.o `test -f '../eg/boot_clt.c' || echo '../../tests/'`../eg/boot_clt.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o data_fill.o `test -f '../eg/data_fill.c' || echo '../../tests/'`../eg/data_fill.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o draw_to_db.o `test -f '../eg/draw_to_db.c' || echo '../../tests/'`../eg/draw_to_db.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o db_fns.o `test -f '../eg/db_fns.c' || echo '../../tests/'`../eg/db_fns.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o dot_products.o `test -f '../eg/dot_products.c' || echo '../../tests/'`../eg/dot_products.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o entropy_vector.o `test -f '../eg/entropy_vector.c' || echo '../../tests/'`../eg/entropy_vector.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o iv.o `test -f '../eg/iv.c' || echo '../../tests/'`../eg/iv.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o ks_tests.o `test -f '../eg/ks_tests.c' || echo '../../tests/'`../eg/ks_tests.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o logit.o `test -f '../eg/logit.c' || echo '../../tests/'`../eg/logit.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fake_logit.o `test -f '../eg/fake_logit.c' || echo '../../tests/'`../eg/fake_logit.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o normalization_demo.o `test -f '../eg/normalization_demo.c' || echo '../../tests/'`../eg/normalization_demo.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o ols.o `test -f '../eg/ols.c' || echo '../../tests/'`../eg/ols.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o ols_oneliner.o `test -f '../eg/ols_oneliner.c' || echo '../../tests/'`../eg/ols_oneliner.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o parameterization.o `test -f '../eg/parameterization.c' || echo '../../tests/'`../eg/parameterization.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o simple_subsets.o `test -f '../eg/simple_subsets.c' || echo '../../tests/'`../eg/simple_subsets.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o t_test_by_rows.o `test -f '../eg/t_test_by_rows.c' || echo '../../tests/'`../eg/t_test_by_rows.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_distances.o `test -f '../eg/test_distances.c' || echo '../../tests/'`../eg/test_distances.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_fisher.o `test -f '../eg/test_fisher.c' || echo '../../tests/'`../eg/test_fisher.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_harmonic.o `test -f '../eg/test_harmonic.c' || echo '../../tests/'`../eg/test_harmonic.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_pruning.o `test -f '../eg/test_pruning.c' || echo '../../tests/'`../eg/test_pruning.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_regex.o `test -f '../eg/test_regex.c' || echo '../../tests/'`../eg/test_regex.c /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o db_tests db_tests.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o error_test error_test.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o factors factors.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/db_tests db_tests.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/error_test error_test.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting 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../eg/.libs/normalization_demo normalization_demo.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ../eg/ols_oneliner ols_oneliner.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/ols ols.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc 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-Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/t_test_by_rows t_test_by_rows.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ../eg/test_fisher test_fisher.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ../eg/test_harmonic test_harmonic.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_distances test_distances.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ../eg/test_pruning test_pruning.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_fisher test_fisher.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ../eg/test_regex test_regex.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_harmonic test_harmonic.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o test_apop test_apop.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_pruning test_pruning.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_regex test_regex.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/<>/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/test_apop test_apop.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp make[3]: Leaving directory '/<>/apophenia-1.0+ds/_build/tests' make check-TESTS make[3]: Entering directory '/<>/apophenia-1.0+ds/_build/tests' make[4]: Entering directory '/<>/apophenia-1.0+ds/_build/tests' PASS: db_tests PASS: error_test PASS: factors PASS: sort_example PASS: ../eg/apop_map_row PASS: ../eg/binning PASS: utilities_test ../../build-aux/test-driver: line 107: 13586 Aborted (core dumped) "$@" > $log_file 2>&1 FAIL: test_apop ../../build-aux/test-driver: line 107: 13580 Aborted (core dumped) "$@" > $log_file 2>&1 FAIL: nist_tests PASS: ../eg/boot_clt PASS: ../eg/data_fill PASS: ../eg/draw_to_db PASS: ../eg/entropy_vector PASS: ../eg/dot_products ../../build-aux/test-driver: line 107: 13891 Aborted (core dumped) "$@" > $log_file 2>&1 FAIL: ../eg/iv PASS: ../eg/ks_tests PASS: ../eg/normalization_demo ../../build-aux/test-driver: line 107: 14011 Aborted (core dumped) "$@" > $log_file 2>&1 FAIL: ../eg/ols PASS: ../eg/fake_logit PASS: ../eg/parameterization ../../build-aux/test-driver: line 107: 14042 Aborted (core dumped) "$@" > $log_file 2>&1 FAIL: ../eg/ols_oneliner PASS: ../eg/simple_subsets PASS: ../eg/test_distances PASS: ../eg/t_test_by_rows PASS: ../eg/test_fisher PASS: ../eg/test_harmonic PASS: ../eg/test_pruning PASS: ../eg/test_regex PASS: ../eg/db_fns PASS: ../eg/logit ========================================= apophenia 1.0: tests/test-suite.log ========================================= # TOTAL: 30 # PASS: 25 # SKIP: 0 # XFAIL: 0 # FAIL: 5 # XPASS: 0 # ERROR: 0 .. contents:: :depth: 2 FAIL: nist_tests ================ gsl: ../gsl/gsl_vector_double.h:180: ERROR: index out of range Default GSL error handler invoked. FAIL nist_tests (exit status: 134) FAIL: test_apop =============== gsl: ../gsl/gsl_vector_double.h:180: ERROR: index out of range Sundry tests for Apophenia. Running relatively faster tests. To run slower tests (primarily simulated annealing), use -s. For quieter output, use -q. To change thread count (default=2), use -t1, -t2, -t3, ... Default GSL error handler invoked. FAIL test_apop (exit status: 134) FAIL: ../eg/iv ============== gsl: ../gsl/gsl_vector_double.h:180: ERROR: index out of range Default GSL error handler invoked. FAIL ../eg/iv (exit status: 134) FAIL: ../eg/ols =============== gsl: ../gsl/gsl_vector_double.h:180: ERROR: index out of range Default GSL error handler invoked. FAIL ../eg/ols (exit status: 134) FAIL: ../eg/ols_oneliner ======================== gsl: ../gsl/gsl_vector_double.h:180: ERROR: index out of range Default GSL error handler invoked. FAIL ../eg/ols_oneliner (exit status: 134) ============================================================================ Testsuite summary for apophenia 1.0 ============================================================================ # TOTAL: 30 # PASS: 25 # SKIP: 0 # XFAIL: 0 # FAIL: 5 # XPASS: 0 # ERROR: 0 ============================================================================ See tests/test-suite.log Please report to fluffmail@f-m.fm ============================================================================ make[4]: *** [Makefile:1822: test-suite.log] Error 1 make[4]: Leaving directory '/<>/apophenia-1.0+ds/_build/tests' make[3]: *** [Makefile:1930: check-TESTS] Error 2 make[3]: Leaving directory '/<>/apophenia-1.0+ds/_build/tests' make[2]: *** [Makefile:2347: check-am] Error 2 make[2]: Leaving directory '/<>/apophenia-1.0+ds/_build/tests' make[1]: *** [Makefile:959: check-recursive] Error 1 make[1]: Leaving directory '/<>/apophenia-1.0+ds/_build' dh_auto_test: cd _build && make V=1 -j4 check VERBOSE=1 returned exit code 2 make: *** [debian/rules:22: build] Error 2 dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 20190109-0409 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 42212 Build-Time: 95 Distribution: disco Fail-Stage: build Host Architecture: amd64 Install-Time: 60 Job: apophenia_1.0+ds-7build1.dsc Machine Architecture: amd64 Package: apophenia Package-Time: 155 Source-Version: 1.0+ds-7build1 Space: 42212 Status: attempted Version: 1.0+ds-7build1 -------------------------------------------------------------------------------- Finished at 20190109-0409 Build needed 00:02:35, 42212k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15900740 Scanning for processes to kill in build PACKAGEBUILD-15900740