https://launchpad.net/ubuntu/+archive/test-rebuild-20181220-gcc9/+build/15917389 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux bos02-arm64-026 4.4.0-141-generic #167-Ubuntu SMP Wed Dec 5 10:50:27 UTC 2018 aarch64 Buildd toolchain package versions: launchpad-buildd_165 python-lpbuildd_165 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 10 Jan 04:30:40 ntpdate[1810]: adjust time server 10.211.37.1 offset -0.274323 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=armhf PACKAGEBUILD-15917389 /home/buildd/filecache-default/a8e076447bc9c859868a26138221e631724b6c90 Creating target for build PACKAGEBUILD-15917389 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=armhf PACKAGEBUILD-15917389 Starting target for build PACKAGEBUILD-15917389 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=armhf PACKAGEBUILD-15917389 'deb http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco main' 'deb http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco main' 'deb http://ftpmaster.internal/ubuntu disco main restricted universe multiverse' 'deb http://ftpmaster.internal/ubuntu disco-security main restricted universe multiverse' 'deb http://ftpmaster.internal/ubuntu disco-updates main restricted universe multiverse' Overriding sources.list in build-PACKAGEBUILD-15917389 RUN: /usr/share/launchpad-buildd/slavebin/in-target add-trusted-keys --backend=chroot --series=disco --arch=armhf PACKAGEBUILD-15917389 Adding trusted keys to build-PACKAGEBUILD-15917389 Warning: apt-key output should not be parsed (stdout is not a terminal) OK Warning: apt-key output should not be parsed (stdout is not a terminal) /etc/apt/trusted.gpg -------------------- pub rsa1024 2009-10-22 [SC] 60C3 1780 3A41 BA51 845E 371A 1E93 77A2 BA9E F27F uid [ unknown] Launchpad Toolchain builds /etc/apt/trusted.gpg.d/ubuntu-keyring-2012-archive.gpg ------------------------------------------------------ pub rsa4096 2012-05-11 [SC] 790B C727 7767 219C 42C8 6F93 3B4F E6AC C0B2 1F32 uid [ unknown] Ubuntu Archive Automatic Signing Key (2012) /etc/apt/trusted.gpg.d/ubuntu-keyring-2012-cdimage.gpg ------------------------------------------------------ pub rsa4096 2012-05-11 [SC] 8439 38DF 228D 22F7 B374 2BC0 D94A A3F0 EFE2 1092 uid [ unknown] Ubuntu CD Image Automatic Signing Key (2012) /etc/apt/trusted.gpg.d/ubuntu-keyring-2018-archive.gpg ------------------------------------------------------ pub rsa4096 2018-09-17 [SC] F6EC B376 2474 EDA9 D21B 7022 8719 20D1 991B C93C uid [ unknown] Ubuntu Archive Automatic Signing Key (2018) RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=armhf PACKAGEBUILD-15917389 Updating target for build PACKAGEBUILD-15917389 Get:1 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:2 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco InRelease [15.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:4 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco InRelease [15.4 kB] Get:5 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main armhf Packages [959 kB] Get:7 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main armhf Packages [13.5 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main Translation-en [514 kB] Get:9 http://ftpmaster.internal/ubuntu disco/universe armhf Packages [8650 kB] Get:10 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main Translation-en [9512 B] Get:11 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf Packages [142 kB] Get:12 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5170 kB] Get:13 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main Translation-en [26.9 kB] Get:14 http://ftpmaster.internal/ubuntu disco/multiverse armhf Packages [127 kB] Get:15 http://ftpmaster.internal/ubuntu disco/multiverse Translation-en [113 kB] Fetched 16.1 MB in 6s (2743 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: g++-8 libstdc++-8-dev Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: cpp-9 g++-9 gcc-9 gcc-9-base libgcc-9-dev libstdc++-9-dev The following packages will be upgraded: binutils binutils-arm-linux-gnueabihf binutils-common cpp dash dpkg dpkg-dev e2fslibs e2fsprogs g++ gcc grep init init-system-helpers libasan5 libassuan0 libatomic1 libbinutils libcc1-0 libcom-err2 libcomerr2 libdpkg-perl libext2fs2 libgcc1 libgnutls30 libgomp1 libmpfr6 libsemanage-common libsemanage1 libsqlite3-0 libss2 libstdc++6 libubsan1 libzstd1 sed tar tzdata 37 upgraded, 6 newly installed, 0 to remove and 0 not upgraded. Need to get 30.1 MB of archives. After this operation, 69.1 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main armhf tar armhf 1.30+dfsg-4 [218 kB] Get:2 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf gcc-9-base armhf 9-20190109-0ubuntu1 [187 kB] Get:3 http://ftpmaster.internal/ubuntu disco/main armhf dpkg armhf 1.19.2ubuntu2 [1056 kB] Get:4 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf libgcc1 armhf 1:9-20190109-0ubuntu1 [37.5 kB] Get:5 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf libstdc++6 armhf 9-20190109-0ubuntu1 [454 kB] Get:6 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main armhf binutils-arm-linux-gnueabihf armhf 2.31.1-11ubuntu1 [2150 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main armhf dash armhf 0.5.10.2-3ubuntu1 [78.4 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main armhf grep armhf 3.3-1 [138 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main armhf sed armhf 4.7-1 [181 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main armhf init-system-helpers all 1.56+nmu1 [38.2 kB] Get:11 http://ftpmaster.internal/ubuntu disco/main armhf libext2fs2 armhf 1.44.5-1 [145 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main armhf e2fsprogs armhf 1.44.5-1 [492 kB] Get:13 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main armhf libbinutils armhf 2.31.1-11ubuntu1 [309 kB] Get:14 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main armhf binutils armhf 2.31.1-11ubuntu1 [3348 B] Get:15 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu disco/main armhf binutils-common armhf 2.31.1-11ubuntu1 [194 kB] Get:16 http://ftpmaster.internal/ubuntu disco/main armhf init armhf 1.56+nmu1 [6080 B] Get:17 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf cpp-9 armhf 9-20190109-0ubuntu1 [5806 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main armhf libsemanage-common all 2.8-2 [7016 B] Get:19 http://ftpmaster.internal/ubuntu disco/main armhf libsemanage1 armhf 2.8-2 [72.7 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main armhf libzstd1 armhf 1.3.8+dfsg-3 [195 kB] Get:21 http://ftpmaster.internal/ubuntu disco/main armhf libgnutls30 armhf 3.6.5-2ubuntu1 [700 kB] Get:22 http://ftpmaster.internal/ubuntu disco/main armhf libcom-err2 armhf 1.44.5-1 [8468 B] Get:23 http://ftpmaster.internal/ubuntu disco/main armhf libss2 armhf 1.44.5-1 [9324 B] Get:24 http://ftpmaster.internal/ubuntu disco/main armhf libsqlite3-0 armhf 3.26.0-3 [449 kB] Get:25 http://ftpmaster.internal/ubuntu disco/main armhf tzdata all 2018i-1 [189 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main armhf libmpfr6 armhf 4.0.2~rc1-1 [196 kB] Get:27 http://ftpmaster.internal/ubuntu disco/main armhf dpkg-dev all 1.19.2ubuntu2 [549 kB] Get:28 http://ftpmaster.internal/ubuntu disco/main armhf libdpkg-perl all 1.19.2ubuntu2 [227 kB] Get:29 http://ftpmaster.internal/ubuntu disco/main armhf e2fslibs armhf 1.44.5-1 [2704 B] Get:30 http://ftpmaster.internal/ubuntu disco/main armhf libassuan0 armhf 2.5.2-1 [28.7 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main armhf libcomerr2 armhf 1.44.5-1 [2700 B] Get:32 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf libcc1-0 armhf 9-20190109-0ubuntu1 [34.2 kB] Get:33 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf libgomp1 armhf 9-20190109-0ubuntu1 [78.3 kB] Get:34 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf libatomic1 armhf 9-20190109-0ubuntu1 [7068 B] Get:35 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf libasan5 armhf 9-20190109-0ubuntu1 [385 kB] Get:36 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf libubsan1 armhf 9-20190109-0ubuntu1 [120 kB] Get:37 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf libgcc-9-dev armhf 9-20190109-0ubuntu1 [685 kB] Get:38 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf gcc-9 armhf 9-20190109-0ubuntu1 [6382 kB] Get:39 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf libstdc++-9-dev armhf 9-20190109-0ubuntu1 [1667 kB] Get:40 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf g++-9 armhf 9-20190109-0ubuntu1 [6586 kB] Get:41 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf g++ armhf 4:9-20181126-1ubuntu3 [1584 B] Get:42 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf gcc armhf 4:9-20181126-1ubuntu3 [5196 B] Get:43 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf cpp armhf 4:9-20181126-1ubuntu3 [42.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 30.1 MB in 1s (39.8 MB/s) (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../tar_1.30+dfsg-4_armhf.deb ... Unpacking tar (1.30+dfsg-4) over (1.30+dfsg-3) ... Setting up tar (1.30+dfsg-4) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../dpkg_1.19.2ubuntu2_armhf.deb ... Unpacking dpkg (1.19.2ubuntu2) over (1.19.2ubuntu1) ... Setting up dpkg (1.19.2ubuntu2) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../dash_0.5.10.2-3ubuntu1_armhf.deb ... Unpacking dash (0.5.10.2-3ubuntu1) over (0.5.10.2-2) ... Setting up dash (0.5.10.2-3ubuntu1) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../archives/grep_3.3-1_armhf.deb ... Unpacking grep (3.3-1) over (3.1-3) ... Setting up grep (3.3-1) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../archives/sed_4.7-1_armhf.deb ... Unpacking sed (4.7-1) over (4.5-2) ... Setting up sed (4.7-1) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../init-system-helpers_1.56+nmu1_all.deb ... Unpacking init-system-helpers (1.56+nmu1) over (1.56) ... Setting up init-system-helpers (1.56+nmu1) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../libext2fs2_1.44.5-1_armhf.deb ... Unpacking libext2fs2:armhf (1.44.5-1) over (1.44.4-2ubuntu1) ... Setting up libext2fs2:armhf (1.44.5-1) ... (Reading database ... 12401 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.44.5-1_armhf.deb ... Unpacking e2fsprogs (1.44.5-1) over (1.44.4-2ubuntu1) ... Preparing to unpack .../init_1.56+nmu1_armhf.deb ... Unpacking init (1.56+nmu1) over (1.56) ... Selecting previously unselected package gcc-9-base:armhf. Preparing to unpack .../gcc-9-base_9-20190109-0ubuntu1_armhf.deb ... Unpacking gcc-9-base:armhf (9-20190109-0ubuntu1) ... Setting up gcc-9-base:armhf (9-20190109-0ubuntu1) ... (Reading database ... 12407 files and directories currently installed.) Preparing to unpack .../libsemanage-common_2.8-2_all.deb ... Unpacking libsemanage-common (2.8-2) over (2.8-1build2) ... Setting up libsemanage-common (2.8-2) ... (Reading database ... 12407 files and directories currently installed.) Preparing to unpack .../libsemanage1_2.8-2_armhf.deb ... Unpacking libsemanage1:armhf (2.8-2) over (2.8-1build2) ... Setting up libsemanage1:armhf (2.8-2) ... (Reading database ... 12407 files and directories currently installed.) Preparing to unpack .../libzstd1_1.3.8+dfsg-3_armhf.deb ... Unpacking libzstd1:armhf (1.3.8+dfsg-3) over (1.3.5+dfsg-1ubuntu1) ... Setting up libzstd1:armhf (1.3.8+dfsg-3) ... (Reading database ... 12407 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.6.5-2ubuntu1_armhf.deb ... Unpacking libgnutls30:armhf (3.6.5-2ubuntu1) over (3.6.4-2ubuntu2) ... Setting up libgnutls30:armhf (3.6.5-2ubuntu1) ... (Reading database ... 12407 files and directories currently installed.) Preparing to unpack .../libgcc1_1%3a9-20190109-0ubuntu1_armhf.deb ... Unpacking libgcc1:armhf (1:9-20190109-0ubuntu1) over (1:8.2.0-12ubuntu1) ... Setting up libgcc1:armhf (1:9-20190109-0ubuntu1) ... (Reading database ... 12407 files and directories currently installed.) Preparing to unpack .../libstdc++6_9-20190109-0ubuntu1_armhf.deb ... Unpacking libstdc++6:armhf (9-20190109-0ubuntu1) over (8.2.0-12ubuntu1) ... Setting up libstdc++6:armhf (9-20190109-0ubuntu1) ... (Reading database ... 12407 files and directories currently installed.) Preparing to unpack .../00-libcom-err2_1.44.5-1_armhf.deb ... Unpacking libcom-err2:armhf (1.44.5-1) over (1.44.4-2ubuntu1) ... Preparing to unpack .../01-libss2_1.44.5-1_armhf.deb ... Unpacking libss2:armhf (1.44.5-1) over (1.44.4-2ubuntu1) ... Preparing to unpack .../02-libsqlite3-0_3.26.0-3_armhf.deb ... Unpacking libsqlite3-0:armhf (3.26.0-3) over (3.26.0-2) ... 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Preparing to unpack .../16-gcc-9_9-20190109-0ubuntu1_armhf.deb ... Unpacking gcc-9 (9-20190109-0ubuntu1) ... Selecting previously unselected package libstdc++-9-dev:armhf. Preparing to unpack .../17-libstdc++-9-dev_9-20190109-0ubuntu1_armhf.deb ... Unpacking libstdc++-9-dev:armhf (9-20190109-0ubuntu1) ... Selecting previously unselected package g++-9. Preparing to unpack .../18-g++-9_9-20190109-0ubuntu1_armhf.deb ... Unpacking g++-9 (9-20190109-0ubuntu1) ... Preparing to unpack .../19-g++_4%3a9-20181126-1ubuntu3_armhf.deb ... Unpacking g++ (4:9-20181126-1ubuntu3) over (4:8.2.0-2ubuntu2) ... Preparing to unpack .../20-gcc_4%3a9-20181126-1ubuntu3_armhf.deb ... Unpacking gcc (4:9-20181126-1ubuntu3) over (4:8.2.0-2ubuntu2) ... Preparing to unpack .../21-cpp_4%3a9-20181126-1ubuntu3_armhf.deb ... Unpacking cpp (4:9-20181126-1ubuntu3) over (4:8.2.0-2ubuntu2) ... Preparing to unpack .../22-dpkg-dev_1.19.2ubuntu2_all.deb ... Unpacking dpkg-dev (1.19.2ubuntu2) over (1.19.2ubuntu1) ... Preparing to unpack .../23-libdpkg-perl_1.19.2ubuntu2_all.deb ... Unpacking libdpkg-perl (1.19.2ubuntu2) over (1.19.2ubuntu1) ... Preparing to unpack .../24-e2fslibs_1.44.5-1_armhf.deb ... Unpacking e2fslibs:armhf (1.44.5-1) over (1.44.4-2ubuntu1) ... Preparing to unpack .../25-libassuan0_2.5.2-1_armhf.deb ... Unpacking libassuan0:armhf (2.5.2-1) over (2.5.1-2) ... Preparing to unpack .../26-libcomerr2_1.44.5-1_armhf.deb ... Unpacking libcomerr2:armhf (1.44.5-1) over (1.44.4-2ubuntu1) ... Setting up libcom-err2:armhf (1.44.5-1) ... Setting up libgomp1:armhf (9-20190109-0ubuntu1) ... Setting up libatomic1:armhf (9-20190109-0ubuntu1) ... Setting up libss2:armhf (1.44.5-1) ... Setting up libcc1-0:armhf (9-20190109-0ubuntu1) ... Setting up e2fslibs:armhf (1.44.5-1) ... Setting up tzdata (2018i-1) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Jan 10 04:31:09 UTC 2019. Universal Time is now: Thu Jan 10 04:31:09 UTC 2019. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up init (1.56+nmu1) ... Setting up libmpfr6:armhf (4.0.2~rc1-1) ... Setting up libdpkg-perl (1.19.2ubuntu2) ... Setting up e2fsprogs (1.44.5-1) ... Setting up binutils-common:armhf (2.31.1-11ubuntu1) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Setting up cpp-9 (9-20190109-0ubuntu1) ... Setting up libsqlite3-0:armhf (3.26.0-3) ... Setting up libcomerr2:armhf (1.44.5-1) ... Setting up libasan5:armhf (9-20190109-0ubuntu1) ... Setting up libassuan0:armhf (2.5.2-1) ... Setting up libubsan1:armhf (9-20190109-0ubuntu1) ... Setting up cpp (4:9-20181126-1ubuntu3) ... Setting up libgcc-9-dev:armhf (9-20190109-0ubuntu1) ... Setting up libbinutils:armhf (2.31.1-11ubuntu1) ... Setting up binutils-arm-linux-gnueabihf (2.31.1-11ubuntu1) ... Setting up libstdc++-9-dev:armhf (9-20190109-0ubuntu1) ... Setting up binutils (2.31.1-11ubuntu1) ... Setting up gcc-9 (9-20190109-0ubuntu1) ... Setting up g++-9 (9-20190109-0ubuntu1) ... Setting up gcc (4:9-20181126-1ubuntu3) ... Setting up dpkg-dev (1.19.2ubuntu2) ... Setting up g++ (4:9-20181126-1ubuntu3) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-15917389 armhf disco -c chroot:build-PACKAGEBUILD-15917389 --arch=armhf --dist=disco --nolog gatb-core_1.4.1+dfsg-2.dsc Initiating build PACKAGEBUILD-15917389 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-141-generic #167-Ubuntu SMP Wed Dec 5 10:50:27 UTC 2018 armv7l sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-026.buildd +==============================================================================+ | gatb-core 1.4.1+dfsg-2 (armhf) 10 Jan 2019 04:31 | +==============================================================================+ Package: gatb-core Version: 1.4.1+dfsg-2 Source Version: 1.4.1+dfsg-2 Distribution: disco Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf I: NOTICE: Log filtering will replace 'build/gatb-core-MzjNEj/gatb-core-1.4.1+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/gatb-core-MzjNEj' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-15917389/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- gatb-core_1.4.1+dfsg-2.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-UyWXeD/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-UyWXeD/apt_archive ./ InRelease Get:2 copy:/<>/resolver-UyWXeD/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-UyWXeD/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-UyWXeD/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-UyWXeD/apt_archive ./ Packages [525 B] Fetched 2858 B in 0s (126 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-8 libstdc++-8-dev Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-UyWXeD/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 13353 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 11~), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz Filtered Build-Depends: debhelper (>= 11~), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz dpkg-deb: building package 'sbuild-build-depends-gatb-core-dummy' in '/<>/resolver-3vBNr6/apt_archive/sbuild-build-depends-gatb-core-dummy.deb'. Ign:1 copy:/<>/resolver-3vBNr6/apt_archive ./ InRelease Get:2 copy:/<>/resolver-3vBNr6/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-3vBNr6/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-3vBNr6/apt_archive ./ Sources [265 B] Get:5 copy:/<>/resolver-3vBNr6/apt_archive ./ Packages [586 B] Fetched 2970 B in 0s (137 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install gatb-core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: g++-8 Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base hdf5-helpers intltool-debian libaec-dev libaec0 libarchive-zip-perl libarchive13 libasn1-8-heimdal libboost-dev libboost1.67-dev libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-7 libcppunit-1.14-0 libcppunit-dev libcroco3 libcurl4 libdatrie1 libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libhcrypto4-heimdal libhdf5-100 libhdf5-cpp-100 libhdf5-dev libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu63 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjsoncpp-dev libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblab-gamut1 libldap-2.4-2 libldap-common libllvm7 libltdl7 libmagic-mgc libmagic1 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpsl5 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libsz2 libthai-data libthai0 libtiff5 libtool libuv1 libwebp6 libwind0-heimdal libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 m4 man-db po-debconf ucf x11-common zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make doxygen-latex doxygen-doc doxygen-gui gettext-doc libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff lrzip libboost-doc libboost1.67-doc libboost-atomic1.67-dev libboost-chrono1.67-dev libboost-container1.67-dev libboost-context1.67-dev libboost-coroutine1.67-dev libboost-date-time1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev libboost-filesystem1.67-dev libboost-graph1.67-dev libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev libboost-program-options1.67-dev libboost-python1.67-dev libboost-random1.67-dev libboost-regex1.67-dev libboost-serialization1.67-dev libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-test1.67-dev libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev libcppunit-doc libgd-tools krb5-doc krb5-user libhdf5-doc libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx fonts-liberation libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgts-bin krb5-locales publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base hdf5-helpers intltool-debian libaec-dev libaec0 libarchive-zip-perl libarchive13 libasn1-8-heimdal libboost-dev libboost1.67-dev libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-7 libcppunit-1.14-0 libcppunit-dev libcroco3 libcurl4 libdatrie1 libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libhcrypto4-heimdal libhdf5-100 libhdf5-cpp-100 libhdf5-dev libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu63 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjsoncpp-dev libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblab-gamut1 libldap-2.4-2 libldap-common libllvm7 libltdl7 libmagic-mgc libmagic1 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpsl5 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libsz2 libthai-data libthai0 libtiff5 libtool libuv1 libwebp6 libwind0-heimdal libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 m4 man-db po-debconf sbuild-build-depends-gatb-core-dummy ucf x11-common zlib1g-dev 0 upgraded, 131 newly installed, 0 to remove and 0 not upgraded. Need to get 63.4 MB of archives. After this operation, 343 MB of additional disk space will be used. Get:1 copy:/<>/resolver-3vBNr6/apt_archive ./ sbuild-build-depends-gatb-core-dummy 0.invalid.0 [912 B] Get:2 http://ftpmaster.internal/ubuntu disco/main armhf libxau6 armhf 1:1.0.8-1 [7324 B] Get:3 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu disco/main armhf libgfortran5 armhf 9-20190109-0ubuntu1 [247 kB] Get:4 http://ftpmaster.internal/ubuntu disco/main armhf libbsd0 armhf 0.9.1-1 [43.1 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main armhf libxdmcp6 armhf 1:1.1.2-3 [9316 B] Get:6 http://ftpmaster.internal/ubuntu disco/main armhf libxcb1 armhf 1.13.1-2 [40.8 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main armhf libx11-data all 2:1.6.7-1 [113 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main armhf libx11-6 armhf 2:1.6.7-1 [515 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main armhf libxext6 armhf 2:1.3.3-1 [25.1 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main armhf bsdmainutils armhf 11.1.2ubuntu2 [176 kB] Get:11 http://ftpmaster.internal/ubuntu disco/main armhf groff-base armhf 1.22.3-10 [1013 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main armhf libpipeline1 armhf 1.5.0-2 [21.5 kB] Get:13 http://ftpmaster.internal/ubuntu disco/main armhf man-db armhf 2.8.5-1 [1068 kB] Get:14 http://ftpmaster.internal/ubuntu disco/main armhf x11-common all 1:7.7+19ubuntu8 [22.5 kB] Get:15 http://ftpmaster.internal/ubuntu disco/main armhf libice6 armhf 2:1.0.9-2 [33.5 kB] Get:16 http://ftpmaster.internal/ubuntu disco/main armhf libsm6 armhf 2:1.2.2-1 [13.9 kB] Get:17 http://ftpmaster.internal/ubuntu disco/main armhf libmagic-mgc armhf 1:5.34-2 [197 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main armhf libmagic1 armhf 1:5.34-2 [65.3 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main armhf file armhf 1:5.34-2 [21.9 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main armhf libelf1 armhf 0.175-1 [41.1 kB] Get:21 http://ftpmaster.internal/ubuntu disco/main armhf libexpat1 armhf 2.2.6-1 [60.1 kB] Get:22 http://ftpmaster.internal/ubuntu disco/main armhf libfribidi0 armhf 1.0.5-3 [24.2 kB] Get:23 http://ftpmaster.internal/ubuntu disco/main armhf libglib2.0-0 armhf 2.58.1-2 [1024 kB] Get:24 http://ftpmaster.internal/ubuntu disco/main armhf libicu63 armhf 63.1-5 [7991 kB] Get:25 http://ftpmaster.internal/ubuntu disco/main armhf libxml2 armhf 2.9.4+dfsg1-7ubuntu3 [533 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main armhf ucf all 3.0038 [50.5 kB] Get:27 http://ftpmaster.internal/ubuntu disco/main armhf gettext-base armhf 0.19.8.1-9 [46.0 kB] Get:28 http://ftpmaster.internal/ubuntu disco/main armhf libedit2 armhf 3.1-20181209-1 [71.3 kB] Get:29 http://ftpmaster.internal/ubuntu disco/main armhf libkrb5support0 armhf 1.16.2-1 [27.4 kB] Get:30 http://ftpmaster.internal/ubuntu disco/main armhf libk5crypto3 armhf 1.16.2-1 [83.1 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main armhf libkeyutils1 armhf 1.5.9-9.3 [8660 B] Get:32 http://ftpmaster.internal/ubuntu disco/main armhf libkrb5-3 armhf 1.16.2-1 [235 kB] Get:33 http://ftpmaster.internal/ubuntu disco/main armhf libgssapi-krb5-2 armhf 1.16.2-1 [101 kB] Get:34 http://ftpmaster.internal/ubuntu disco/main armhf libpsl5 armhf 0.20.2-2 [48.7 kB] Get:35 http://ftpmaster.internal/ubuntu disco/main armhf libsigsegv2 armhf 2.12-2 [13.1 kB] Get:36 http://ftpmaster.internal/ubuntu disco/main armhf m4 armhf 1.4.18-2 [186 kB] Get:37 http://ftpmaster.internal/ubuntu disco/main armhf autoconf all 2.69-11 [322 kB] Get:38 http://ftpmaster.internal/ubuntu disco/main armhf autotools-dev all 20180224.1 [39.6 kB] Get:39 http://ftpmaster.internal/ubuntu disco/main armhf automake all 1:1.16.1-4 [522 kB] Get:40 http://ftpmaster.internal/ubuntu disco/main armhf autopoint all 0.19.8.1-9 [412 kB] Get:41 http://ftpmaster.internal/ubuntu disco/main armhf cmake-data all 3.13.2-1 [1457 kB] Get:42 http://ftpmaster.internal/ubuntu disco/main armhf libarchive13 armhf 3.3.3-3 [268 kB] Get:43 http://ftpmaster.internal/ubuntu disco/main armhf libroken18-heimdal armhf 7.5.0+dfsg-2.1 [34.0 kB] Get:44 http://ftpmaster.internal/ubuntu disco/main armhf libasn1-8-heimdal armhf 7.5.0+dfsg-2.1 [138 kB] Get:45 http://ftpmaster.internal/ubuntu disco/main armhf libheimbase1-heimdal armhf 7.5.0+dfsg-2.1 [24.0 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main armhf libhcrypto4-heimdal armhf 7.5.0+dfsg-2.1 [76.7 kB] Get:47 http://ftpmaster.internal/ubuntu disco/main armhf libwind0-heimdal armhf 7.5.0+dfsg-2.1 [47.1 kB] Get:48 http://ftpmaster.internal/ubuntu disco/main armhf libhx509-5-heimdal armhf 7.5.0+dfsg-2.1 [87.8 kB] Get:49 http://ftpmaster.internal/ubuntu disco/main armhf libkrb5-26-heimdal armhf 7.5.0+dfsg-2.1 [167 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main armhf libheimntlm0-heimdal armhf 7.5.0+dfsg-2.1 [13.1 kB] Get:51 http://ftpmaster.internal/ubuntu disco/main armhf libgssapi3-heimdal armhf 7.5.0+dfsg-2.1 [78.7 kB] Get:52 http://ftpmaster.internal/ubuntu disco/main armhf libsasl2-modules-db armhf 2.1.27~101-g0780600+dfsg-3ubuntu2 [13.0 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main armhf libsasl2-2 armhf 2.1.27~101-g0780600+dfsg-3ubuntu2 [42.0 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main armhf libldap-common all 2.4.46+dfsg-5ubuntu3 [16.0 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main armhf libldap-2.4-2 armhf 2.4.46+dfsg-5ubuntu3 [131 kB] Get:56 http://ftpmaster.internal/ubuntu disco/main armhf libnghttp2-14 armhf 1.35.1-1 [68.3 kB] Get:57 http://ftpmaster.internal/ubuntu disco/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [49.2 kB] Get:58 http://ftpmaster.internal/ubuntu disco/main armhf libcurl4 armhf 7.61.0-1ubuntu2.2 [185 kB] Get:59 http://ftpmaster.internal/ubuntu disco/main armhf libjsoncpp1 armhf 1.7.4-3 [65.9 kB] Get:60 http://ftpmaster.internal/ubuntu disco/main armhf librhash0 armhf 1.3.7-1 [106 kB] Get:61 http://ftpmaster.internal/ubuntu disco/main armhf libuv1 armhf 1.24.0-1 [58.1 kB] Get:62 http://ftpmaster.internal/ubuntu disco/main armhf cmake armhf 3.13.2-1 [2832 kB] Get:63 http://ftpmaster.internal/ubuntu disco/universe armhf d-shlibs all 0.83 [10.6 kB] Get:64 http://ftpmaster.internal/ubuntu disco/main armhf libtool all 2.4.6-6 [195 kB] Get:65 http://ftpmaster.internal/ubuntu disco/main armhf dh-autoreconf all 19 [16.1 kB] Get:66 http://ftpmaster.internal/ubuntu disco/main armhf libarchive-zip-perl all 1.64-1 [84.9 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main armhf libfile-stripnondeterminism-perl all 1.0.0-1 [13.9 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main armhf dh-strip-nondeterminism all 1.0.0-1 [5064 B] Get:69 http://ftpmaster.internal/ubuntu disco/main armhf dwz armhf 0.12-3 [72.1 kB] Get:70 http://ftpmaster.internal/ubuntu disco/main armhf libcroco3 armhf 0.6.12-3 [69.6 kB] Get:71 http://ftpmaster.internal/ubuntu disco/main armhf gettext armhf 0.19.8.1-9 [833 kB] Get:72 http://ftpmaster.internal/ubuntu disco/main armhf intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:73 http://ftpmaster.internal/ubuntu disco/main armhf po-debconf all 1.0.21 [233 kB] Get:74 http://ftpmaster.internal/ubuntu disco/main armhf debhelper all 11.5.3ubuntu1 [888 kB] Get:75 http://ftpmaster.internal/ubuntu disco/main armhf libllvm7 armhf 1:7.0.1-4 [11.2 MB] Get:76 http://ftpmaster.internal/ubuntu disco/universe armhf libclang1-7 armhf 1:7.0.1-4 [4956 kB] Get:77 http://ftpmaster.internal/ubuntu disco/main armhf libxapian30 armhf 1.4.9-1 [554 kB] Get:78 http://ftpmaster.internal/ubuntu disco/universe armhf doxygen armhf 1.8.13-10ubuntu1 [3463 kB] Get:79 http://ftpmaster.internal/ubuntu disco/main armhf libfreetype6 armhf 2.8.1-2ubuntu2 [280 kB] Get:80 http://ftpmaster.internal/ubuntu disco/main armhf fonts-dejavu-core all 2.37-1 [1041 kB] Get:81 http://ftpmaster.internal/ubuntu disco/main armhf fontconfig-config all 2.13.0-5ubuntu3 [28.4 kB] Get:82 http://ftpmaster.internal/ubuntu disco/main armhf libfontconfig1 armhf 2.13.0-5ubuntu3 [93.9 kB] Get:83 http://ftpmaster.internal/ubuntu disco/main armhf fontconfig armhf 2.13.0-5ubuntu3 [168 kB] Get:84 http://ftpmaster.internal/ubuntu disco/universe armhf libcdt5 armhf 2.40.1-5build2 [16.7 kB] Get:85 http://ftpmaster.internal/ubuntu disco/universe armhf libcgraph6 armhf 2.40.1-5build2 [34.0 kB] Get:86 http://ftpmaster.internal/ubuntu disco/main armhf libjpeg-turbo8 armhf 2.0.0-0ubuntu2 [90.0 kB] Get:87 http://ftpmaster.internal/ubuntu disco/main armhf libjpeg8 armhf 8c-2ubuntu8 [2202 B] Get:88 http://ftpmaster.internal/ubuntu disco/main armhf libjbig0 armhf 2.1-3.1build1 [23.9 kB] Get:89 http://ftpmaster.internal/ubuntu disco/main armhf libwebp6 armhf 0.6.1-2 [152 kB] Get:90 http://ftpmaster.internal/ubuntu disco/main armhf libtiff5 armhf 4.0.10-3 [139 kB] Get:91 http://ftpmaster.internal/ubuntu disco/main armhf libxpm4 armhf 1:3.5.12-1 [29.0 kB] Get:92 http://ftpmaster.internal/ubuntu disco/main armhf libgd3 armhf 2.2.5-5 [98.5 kB] Get:93 http://ftpmaster.internal/ubuntu disco/universe armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [132 kB] Get:94 http://ftpmaster.internal/ubuntu disco/main armhf libpixman-1-0 armhf 0.36.0-1 [157 kB] Get:95 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-render0 armhf 1.13.1-2 [13.9 kB] Get:96 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-shm0 armhf 1.13.1-2 [5380 B] Get:97 http://ftpmaster.internal/ubuntu disco/main armhf libxrender1 armhf 1:0.9.10-1 [15.6 kB] Get:98 http://ftpmaster.internal/ubuntu disco/main armhf libcairo2 armhf 1.16.0-1 [511 kB] Get:99 http://ftpmaster.internal/ubuntu disco/main armhf libltdl7 armhf 2.4.6-6 [35.7 kB] Get:100 http://ftpmaster.internal/ubuntu disco/main armhf libthai-data all 0.1.28-1 [134 kB] Get:101 http://ftpmaster.internal/ubuntu disco/main armhf libdatrie1 armhf 0.2.12-1 [15.0 kB] Get:102 http://ftpmaster.internal/ubuntu disco/main armhf libthai0 armhf 0.1.28-1 [14.7 kB] Get:103 http://ftpmaster.internal/ubuntu disco/main armhf libpango-1.0-0 armhf 1.42.4-6 [138 kB] Get:104 http://ftpmaster.internal/ubuntu disco/main armhf libgraphite2-3 armhf 1.3.12-1 [63.1 kB] Get:105 http://ftpmaster.internal/ubuntu disco/main armhf libharfbuzz0b armhf 2.3.0-1 [327 kB] Get:106 http://ftpmaster.internal/ubuntu disco/main armhf libpangoft2-1.0-0 armhf 1.42.4-6 [30.0 kB] Get:107 http://ftpmaster.internal/ubuntu disco/main armhf libpangocairo-1.0-0 armhf 1.42.4-6 [19.5 kB] Get:108 http://ftpmaster.internal/ubuntu disco/universe armhf libpathplan4 armhf 2.40.1-5build2 [19.8 kB] Get:109 http://ftpmaster.internal/ubuntu disco/universe armhf libgvc6 armhf 2.40.1-5build2 [509 kB] Get:110 http://ftpmaster.internal/ubuntu disco/universe armhf libgvpr2 armhf 2.40.1-5build2 [146 kB] Get:111 http://ftpmaster.internal/ubuntu disco/universe armhf liblab-gamut1 armhf 2.40.1-5build2 [177 kB] Get:112 http://ftpmaster.internal/ubuntu disco/main armhf libxt6 armhf 1:1.1.5-1 [129 kB] Get:113 http://ftpmaster.internal/ubuntu disco/main armhf libxmu6 armhf 2:1.1.2-2 [38.3 kB] Get:114 http://ftpmaster.internal/ubuntu disco/main armhf libxaw7 armhf 2:1.0.13-1 [141 kB] Get:115 http://ftpmaster.internal/ubuntu disco/universe armhf graphviz armhf 2.40.1-5build2 [481 kB] Get:116 http://ftpmaster.internal/ubuntu disco/universe armhf hdf5-helpers armhf 1.10.0-patch1+docs-4build2 [12.3 kB] Get:117 http://ftpmaster.internal/ubuntu disco/universe armhf libaec0 armhf 1.0.2-1 [19.1 kB] Get:118 http://ftpmaster.internal/ubuntu disco/main armhf libboost1.67-dev armhf 1.67.0-11 [8362 kB] Get:119 http://ftpmaster.internal/ubuntu disco/main armhf libboost-dev armhf 1.67.0.1 [3228 B] Get:120 http://ftpmaster.internal/ubuntu disco/universe armhf libcppunit-1.14-0 armhf 1.14.0-3 [67.5 kB] Get:121 http://ftpmaster.internal/ubuntu disco/universe armhf libcppunit-dev armhf 1.14.0-3 [129 kB] Get:122 http://ftpmaster.internal/ubuntu disco/universe armhf libsz2 armhf 1.0.2-1 [5072 B] Get:123 http://ftpmaster.internal/ubuntu disco/universe armhf libhdf5-100 armhf 1.10.0-patch1+docs-4build2 [1210 kB] Get:124 http://ftpmaster.internal/ubuntu disco/universe armhf libhdf5-cpp-100 armhf 1.10.0-patch1+docs-4build2 [91.2 kB] Get:125 http://ftpmaster.internal/ubuntu disco/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-0ubuntu2 [168 kB] Get:126 http://ftpmaster.internal/ubuntu disco/main armhf libjpeg-turbo8-dev armhf 2.0.0-0ubuntu2 [203 kB] Get:127 http://ftpmaster.internal/ubuntu disco/main armhf libjpeg8-dev armhf 8c-2ubuntu8 [1554 B] Get:128 http://ftpmaster.internal/ubuntu disco/main armhf libjpeg-dev armhf 8c-2ubuntu8 [1554 B] Get:129 http://ftpmaster.internal/ubuntu disco/universe armhf libaec-dev armhf 1.0.2-1 [16.3 kB] Get:130 http://ftpmaster.internal/ubuntu disco/universe armhf libhdf5-dev armhf 1.10.0-patch1+docs-4build2 [3463 kB] Get:131 http://ftpmaster.internal/ubuntu disco/main armhf libjsoncpp-dev armhf 1.7.4-3 [77.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 63.4 MB in 2s (28.3 MB/s) Selecting previously unselected package libxau6:armhf. 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Setting up fontconfig (2.13.0-5ubuntu3) ... Regenerating fonts cache... done. Setting up libxext6:armhf (2:1.3.3-1) ... Setting up libgd3:armhf (2.2.5-5) ... Setting up libxmu6:armhf (2:1.1.2-2) ... Setting up libldap-2.4-2:armhf (2.4.46+dfsg-5ubuntu3) ... Setting up libpango-1.0-0:armhf (1.42.4-6) ... Setting up libxaw7:armhf (2:1.0.13-1) ... Setting up libcairo2:armhf (1.16.0-1) ... Setting up libcurl4:armhf (7.61.0-1ubuntu2.2) ... Setting up libpangoft2-1.0-0:armhf (1.42.4-6) ... Setting up cmake (3.13.2-1) ... Setting up libpangocairo-1.0-0:armhf (1.42.4-6) ... Setting up libgvc6 (2.40.1-5build2) ... Setting up graphviz (2.40.1-5build2) ... Setting up dh-strip-nondeterminism (1.0.0-1) ... Setting up debhelper (11.5.3ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up sbuild-build-depends-gatb-core-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Processing triggers for systemd (239-7ubuntu15) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-141-generic arm64 (armv7l) Toolchain package versions: binutils_2.31.1-11ubuntu1 dpkg-dev_1.19.2ubuntu2 g++-8_8.2.0-12ubuntu1 g++-9_9-20190109-0ubuntu1 gcc-8_8.2.0-12ubuntu1 gcc-9_9-20190109-0ubuntu1 libc6-dev_2.28-0ubuntu1 libstdc++-8-dev_8.2.0-12ubuntu1 libstdc++-9-dev_9-20190109-0ubuntu1 libstdc++6_9-20190109-0ubuntu1 linux-libc-dev_4.18.0-11.12 Package versions: adduser_3.117ubuntu1 advancecomp_2.1-1 apt_1.8.0~alpha2ubuntu1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1ubuntu8 base-passwd_3.5.45 bash_4.4.18-2ubuntu3 binutils_2.31.1-11ubuntu1 binutils-arm-linux-gnueabihf_2.31.1-11ubuntu1 binutils-common_2.31.1-11ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.32-0.1ubuntu2 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libcdt5_2.40.1-5build2 libcgraph6_2.40.1-5build2 libclang1-7_1:7.0.1-4 libcom-err2_1.44.5-1 libcomerr2_1.44.5-1 libcppunit-1.14-0_1.14.0-3 libcppunit-dev_1.14.0-3 libcroco3_0.6.12-3 libcryptsetup12_2:2.0.4-2ubuntu2 libcurl4_7.61.0-1ubuntu2.2 libdatrie1_0.2.12-1 libdb5.3_5.3.28+dfsg1-0.2 libdebconfclient0_0.244ubuntu1 libdevmapper1.02.1_2:1.02.145-4.1ubuntu4 libdpkg-perl_1.19.2ubuntu2 libedit2_3.1-20181209-1 libelf1_0.175-1 libexpat1_2.2.6-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.32-0.1ubuntu2 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.0.0-1 libfontconfig1_2.13.0-5ubuntu3 libfreetype6_2.8.1-2ubuntu2 libfribidi0_1.0.5-3 libgcc-8-dev_8.2.0-12ubuntu1 libgcc-9-dev_9-20190109-0ubuntu1 libgcc1_1:9-20190109-0ubuntu1 libgcrypt20_1.8.4-3ubuntu1 libgd3_2.2.5-5 libgdbm-compat4_1.18.1-2 libgdbm6_1.18.1-2 libgfortran5_9-20190109-0ubuntu1 libglib2.0-0_2.58.1-2 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.5-2ubuntu1 libgomp1_9-20190109-0ubuntu1 libgpg-error0_1.32-3 libgraphite2-3_1.3.12-1 libgssapi-krb5-2_1.16.2-1 libgssapi3-heimdal_7.5.0+dfsg-2.1 libgts-0.7-5_0.7.6+darcs121130-4 libgvc6_2.40.1-5build2 libgvpr2_2.40.1-5build2 libharfbuzz0b_2.3.0-1 libhcrypto4-heimdal_7.5.0+dfsg-2.1 libhdf5-100_1.10.0-patch1+docs-4build2 libhdf5-cpp-100_1.10.0-patch1+docs-4build2 libhdf5-dev_1.10.0-patch1+docs-4build2 libheimbase1-heimdal_7.5.0+dfsg-2.1 libheimntlm0-heimdal_7.5.0+dfsg-2.1 libhogweed4_3.4.1~rc1-1 libhx509-5-heimdal_7.5.0+dfsg-2.1 libice6_2:1.0.9-2 libicu63_63.1-5 libidn11_1.33-2.2ubuntu1 libidn2-0_2.0.5-1 libip4tc0_1.6.1-2ubuntu3 libisl19_0.20-2 libjbig0_2.1-3.1build1 libjpeg-dev_8c-2ubuntu8 libjpeg-turbo8_2.0.0-0ubuntu2 libjpeg-turbo8-dev_2.0.0-0ubuntu2 libjpeg8_8c-2ubuntu8 libjpeg8-dev_8c-2ubuntu8 libjson-c3_0.12.1-1.3 libjsoncpp-dev_1.7.4-3 libjsoncpp1_1.7.4-3 libk5crypto3_1.16.2-1 libkeyutils1_1.5.9-9.3 libkmod2_25-1ubuntu2 libkrb5-26-heimdal_7.5.0+dfsg-2.1 libkrb5-3_1.16.2-1 libkrb5support0_1.16.2-1 liblab-gamut1_2.40.1-5build2 libldap-2.4-2_2.4.46+dfsg-5ubuntu3 libldap-common_2.4.46+dfsg-5ubuntu3 libllvm7_1:7.0.1-4 liblockfile-bin_1.14-1.1 liblockfile1_1.14-1.1 libltdl7_2.4.6-6 liblz4-1_1.8.2-1ubuntu1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmount1_2.32-0.1ubuntu2 libmpc3_1.1.0-1 libmpfr6_4.0.2~rc1-1 libncurses6_6.1+20180210-4ubuntu1 libncursesw6_6.1+20180210-4ubuntu1 libnettle6_3.4.1~rc1-1 libnghttp2-14_1.35.1-1 libnpth0_1.6-1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-3.6ubuntu2 libpam-modules-bin_1.1.8-3.6ubuntu2 libpam-runtime_1.1.8-3.6ubuntu2 libpam0g_1.1.8-3.6ubuntu2 libpango-1.0-0_1.42.4-6 libpangocairo-1.0-0_1.42.4-6 libpangoft2-1.0-0_1.42.4-6 libpathplan4_2.40.1-5build2 libpcre3_2:8.39-11 libperl5.28_5.28.1-3 libpipeline1_1.5.0-2 libpixman-1-0_0.36.0-1 libpng16-16_1.6.34-2 libprocps7_2:3.3.15-2ubuntu1 libpsl5_0.20.2-2 libreadline7_7.0-5 librhash0_1.3.7-1 libroken18-heimdal_7.5.0+dfsg-2.1 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27~101-g0780600+dfsg-3ubuntu2 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3ubuntu2 libseccomp2_2.3.3-3ubuntu2 libselinux1_2.8-1build2 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libslang2_2.3.2-1ubuntu1 libsm6_2:1.2.2-1 libsmartcols1_2.32-0.1ubuntu2 libsqlite3-0_3.26.0-3 libss2_1.44.5-1 libssl1.1_1.1.1a-1ubuntu2 libstdc++-8-dev_8.2.0-12ubuntu1 libstdc++-9-dev_9-20190109-0ubuntu1 libstdc++6_9-20190109-0ubuntu1 libsystemd0_239-7ubuntu15 libsz2_1.0.2-1 libtasn1-6_4.13-3 libthai-data_0.1.28-1 libthai0_0.1.28-1 libtiff5_4.0.10-3 libtinfo6_6.1+20180210-4ubuntu1 libtool_2.4.6-6 libubsan1_9-20190109-0ubuntu1 libudev1_239-7ubuntu15 libunistring2_0.9.10-1ubuntu1 libusb-0.1-4_2:0.1.12-32 libuuid1_2.32-0.1ubuntu2 libuv1_1.24.0-1 libwebp6_0.6.1-2 libwind0-heimdal_7.5.0+dfsg-2.1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxapian30_1.4.9-1 libxau6_1:1.0.8-1 libxaw7_2:1.0.13-1 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1 libxml2_2.9.4+dfsg1-7ubuntu3 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.18.0-11.12 lockfile-progs_0.1.18 login_1:4.5-1ubuntu1 lsb-base_9.20170808ubuntu1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-1 mawk_1.3.3-17ubuntu3 mount_2.32-0.1ubuntu2 multiarch-support_2.28-0ubuntu1 ncurses-base_6.1+20180210-4ubuntu1 ncurses-bin_6.1+20180210-4ubuntu1 openssl_1.1.1a-1ubuntu2 optipng_0.7.6-1.1 passwd_1:4.5-1ubuntu1 patch_2.7.6-3 perl_5.28.1-3 perl-base_5.28.1-3 perl-modules-5.28_5.28.1-3 pinentry-curses_1.1.0-1build2 pkgbinarymangler_143 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu1 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-gatb-core-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_239-7ubuntu15 systemd-sysv_239-7ubuntu15 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 tar_1.30+dfsg-4 tzdata_2018i-1 ubuntu-keyring_2018.09.18.1 ucf_3.0038 util-linux_2.32-0.1ubuntu2 x11-common_1:7.7+19ubuntu8 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 zlib1g-dev_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Fri Jul 6 10:42:50 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./gatb-core_1.4.1+dfsg-2.dsc dpkg-source: info: extracting gatb-core in gatb-core-1.4.1+dfsg dpkg-source: info: unpacking gatb-core_1.4.1+dfsg.orig.tar.xz dpkg-source: info: unpacking gatb-core_1.4.1+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_hdf5.patch dpkg-source: info: applying fix_hdf5_includes.patch dpkg-source: info: applying dynamic_lib.patch dpkg-source: info: applying fix_install_location.patch dpkg-source: info: applying set_soversion.patch dpkg-source: info: applying dynamic_linking_of_tools.patch dpkg-source: info: applying multiarch.patch dpkg-source: info: applying spelling.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-15917389 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-15917389 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-15917389 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package gatb-core dpkg-buildpackage: info: source version 1.4.1+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --sourcedirectory=gatb-core dh_auto_clean -O--sourcedirectory=gatb-core dh_autoreconf_clean -O--sourcedirectory=gatb-core dh_clean -O--sourcedirectory=gatb-core debian/rules build-arch dh build-arch --sourcedirectory=gatb-core dh_update_autotools_config -a -O--sourcedirectory=gatb-core dh_autoreconf -a -O--sourcedirectory=gatb-core dh_auto_configure -a -O--sourcedirectory=gatb-core cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf ../gatb-core -- The C compiler identification is GNU 9.0.0 -- The CXX compiler identification is GNU 9.0.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- CppUnit: found headers (in /usr/include) but not the static library (/usr/include/../lib/libcppunit.a) -- CppUnit FOUND (/usr/include) -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of __uint128 -- Check size of __uint128 - failed -- Check size of __uint128_t -- Check size of __uint128_t - failed -- Options: -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.0.1") -- HDF5_LIBRARIES="/usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so/usr/lib/arm-linux-gnueabihf/libpthread.so/usr/lib/arm-linux-gnueabihf/libsz.so/usr/lib/arm-linux-gnueabihf/libz.so/usr/lib/arm-linux-gnueabihf/libdl.so/usr/lib/arm-linux-gnueabihf/libm.so" -- OPTIMIZED KMER SIZES INTERVALS ARE 32 64 96 128 <-- max supported kmer size without recompilation CMake Warning (dev) at CMakeLists.txt:238 (set): Cannot set "gatb-core-klist": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. -- ---------- GATB TESTS ---------- -- ---------- GATB TOOLS ---------- DYNAMIC BINARIES for dbgh5 DYNAMIC BINARIES for dbginfo DYNAMIC BINARIES for leon -- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.0.1") found components: C CMake Warning (dev) at CMakeLists.txt:265 (set): Cannot set "gatb-core-flags": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:266 (set): Cannot set "gatb-core-includes": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:267 (set): Cannot set "gatb-core-libraries": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:268 (set): Cannot set "gatb-core-cmake": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Doxygen: /usr/bin/doxygen (found version "1.8.13") found components: doxygen dot -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY -- Build files have been written to: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf dh_auto_build -a -O--sourcedirectory=gatb-core cd obj-arm-linux-gnueabihf && make V=1 -j4 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/<>/gatb-core-1.4.1+dfsg/gatb-core -B/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/depend make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/depend make -f thirdparty/CMakeFiles/thirdparty_copy.dir/build.make thirdparty/CMakeFiles/thirdparty_copy.dir/depend make[3]: Entering directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core-1.4.1+dfsg/gatb-core /<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/thirdparty /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/thirdparty/CMakeFiles/thirdparty_copy.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core-1.4.1+dfsg/gatb-core /<>/gatb-core-1.4.1+dfsg/gatb-core/src /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/CMakeFiles/gatbcore-dynamic.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core-1.4.1+dfsg/gatb-core /<>/gatb-core-1.4.1+dfsg/gatb-core/src /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/CMakeFiles/gatbcore-static.dir/DependInfo.cmake --color= Scanning dependencies of target thirdparty_copy make[3]: Leaving directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' make -f thirdparty/CMakeFiles/thirdparty_copy.dir/build.make thirdparty/CMakeFiles/thirdparty_copy.dir/build make[3]: Entering directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E make_directory /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E make_directory /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E copy_if_different /<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty/BooPHF/BooPHF.h /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/ cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E copy_if_different /<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty/json/json.hpp /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/ make[3]: Leaving directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' [ 0%] Built target thirdparty_copy Scanning dependencies of target gatbcore-static make[3]: Leaving directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/build Scanning dependencies of target gatbcore-dynamic make[3]: Leaving directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/build make[3]: Entering directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' make[3]: Entering directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' [ 1%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o [ 1%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o [ 1%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankAlbum.cpp cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp [ 1%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In function ‘bool gatb::core::bank::impl::checkMagic(FILE*)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:54:11: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 54 | fread (&value, sizeof(value), 1, file); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In member function ‘virtual void gatb::core::bank::impl::BankBinary::Iterator::next()’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:453:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 453 | fread (_bufferData->getBuffer(), sizeof( char),block_size, binary_read_file); // read a block of reads into the buffer | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp:23: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp:23: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankFasta.cpp [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankHelpers.cpp [ 3%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankAlbum.cpp [ 4%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankRandom.cpp [ 4%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankSplitter.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp: In function ‘long unsigned int gatb::core::debruijn::impl::logging(std::string)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:67: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 31 | snprintf (tmp, sizeof(tmp), " memory [current, maxRSS]: [%4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 32 | mem, memMaxProcess); | ~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:73: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 31 | snprintf (tmp, sizeof(tmp), " memory [current, maxRSS]: [%4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 32 | mem, memMaxProcess); | ~~~~~~~~~~~~~ | | | u_int64_t {aka long long unsigned int} [ 6%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In function ‘bool gatb::core::bank::impl::checkMagic(FILE*)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:54:11: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 54 | fread (&value, sizeof(value), 1, file); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In member function ‘virtual void gatb::core::bank::impl::BankBinary::Iterator::next()’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:453:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 453 | fread (_bufferData->getBuffer(), sizeof( char),block_size, binary_read_file); // read a block of reads into the buffer | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 6%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp [ 7%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function ‘void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 372 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 374 | if(minimizer==get<2>(tuple)){ | ^~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 389 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 391 | ++indiceUnitigs; | ^~ [ 8%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp [ 8%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 8%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 8%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankFasta.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 994 | copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, | ^~~~ /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::move(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/deque.tcc:1057:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 1057 | move(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, | ^~~~ /usr/include/c++/9/bits/deque.tcc:1057:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::move_backward(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/deque.tcc:1080:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 1080 | move_backward(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:1080:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/9/bits/stl_deque.h:443:23: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 443 | { return std::move(_Deque_iterator<_Tp, const _Tp&, const _Tp*>(__first), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 | _Deque_iterator<_Tp, const _Tp&, const _Tp*>(__last), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 | __result); } | ~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:443:23: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:443:23: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/9/bits/stl_deque.h:458:32: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 458 | { return std::move_backward(_Deque_iterator<_Tp, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ 459 | const _Tp&, const _Tp*>(__first), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 | _Deque_iterator<_Tp, | ~~~~~~~~~~~~~~~~~~~~ 461 | const _Tp&, const _Tp*>(__last), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 | __result); } | ~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:458:32: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:458:32: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 [ 9%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp [ 9%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 10%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankHelpers.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 11%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp [ 11%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp [ 11%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankRandom.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 11%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/impl/BankSplitter.cpp In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2247:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2247 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2248 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 11%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp In file included from /usr/include/c++/9/bits/stl_algobase.h:71, from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/predefined_ops.h: In function ‘bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]’: /usr/include/c++/9/bits/predefined_ops.h:42:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 42 | operator()(_Iterator1 __it1, _Iterator2 __it2) const | ^~~~~~~~ /usr/include/c++/9/bits/predefined_ops.h:42:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 [ 12%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h:83:14: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 83 | if (__comp(__b, __c)) | ~~~~~~^~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:90:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 90 | else if (__comp(__a, __c)) | ~~~~~~^~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:85:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 85 | else if (__comp(__a, __c)) | ~~~~~~^~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:92:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 92 | else if (__comp(__b, __c)) | ~~~~~~^~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 13%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u [ 13%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp [ 13%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 14%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 14%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Configuration.cpp In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 [ 15%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp [ 16%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/ConfigurationAlgorithm.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp: In function ‘long unsigned int gatb::core::debruijn::impl::logging(std::string)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:67: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 31 | snprintf (tmp, sizeof(tmp), " memory [current, maxRSS]: [%4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 32 | mem, memMaxProcess); | ~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:73: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 31 | snprintf (tmp, sizeof(tmp), " memory [current, maxRSS]: [%4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 32 | mem, memMaxProcess); | ~~~~~~~~~~~~~ | | | u_int64_t {aka long long unsigned int} [ 16%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 16%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function ‘void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 372 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 374 | if(minimizer==get<2>(tuple)){ | ^~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 389 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 391 | ++indiceUnitigs; | ^~ [ 16%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp [ 16%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 [ 17%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/LinearCounter.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 17%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp [ 18%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp [ 19%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 19%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/ModelData.cpp [ 19%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 20%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp: In member function ‘void gatb::core::kmer::impl::Repartitor::printInfo()’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:308:41: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 308 | printf("Repartitor : nbMinimizers=%ld\n", nbMinimizers); | ~~^ ~~~~~~~~~~~~ | | | | | size_t {aka unsigned int} | long int | %d /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:309:73: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 309 | for (u_int64_t ii=0; ii>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 994 | copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, | ^~~~ /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::move(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/deque.tcc:1057:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 1057 | move(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, | ^~~~ /usr/include/c++/9/bits/deque.tcc:1057:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::move_backward(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/deque.tcc:1080:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 1080 | move_backward(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:1080:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/9/bits/stl_deque.h:443:23: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 443 | { return std::move(_Deque_iterator<_Tp, const _Tp&, const _Tp*>(__first), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 | _Deque_iterator<_Tp, const _Tp&, const _Tp*>(__last), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 | __result); } | ~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:443:23: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:443:23: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/9/bits/stl_deque.h:458:32: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 458 | { return std::move_backward(_Deque_iterator<_Tp, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ 459 | const _Tp&, const _Tp*>(__first), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 | _Deque_iterator<_Tp, | ~~~~~~~~~~~~~~~~~~~~ 461 | const _Tp&, const _Tp*>(__last), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 | __result); } | ~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:458:32: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:458:32: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Repartitor::itriple&}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Repartitor::itriple}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 78 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1910:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1910 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1911 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1910:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::Repartitor::computeDistrib(const gatb::core::kmer::impl::PartiInfo<5>&)’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 [ 20%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp [ 21%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp [ 21%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ [ 21%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 21%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp [ 22%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 22%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.cpp [ 23%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp [ 23%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp [ 25%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/ThreadMacos.cpp [ 25%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp: In constructor ‘gatb::core::system::impl::ThreadLinux::ThreadLinux(void* (*)(void*), void*)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp:51:7: warning: variable ‘ret’ set but not used [-Wunused-but-set-variable] 51 | int ret = pthread_attr_init ( &tattr ) ; | ^~~ [ 25%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp [ 26%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/HeaderCoder.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/HeaderCoder.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:27, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function ‘kmer_type DnaDecoder::extendAnchor(kmer_type, int, bool)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_destroy_data_aux(std::deque<_Tp, _Alloc>::iterator, std::deque<_Tp, _Alloc>::iterator) [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 854 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/stl_deque.h: In destructor ‘std::deque<_Tp, _Alloc>::~deque() [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:27, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function ‘void DnaDecoder::decodeAnchorRead()’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/stl_deque.h: In function ‘json::JSON json::{anonymous}::parse_next(const string&, size_t&)’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void DnaEncoder::buildKmers()’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 26%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp [ 27%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.hpp:26, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.cpp:21: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In constructor ‘Order0Model::Order0Model(int)’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 27%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Observer.cpp [ 28%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.cpp [ 28%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:71, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 [ 29%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/api/IHistogram.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/api/IHistogram.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 29%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp [ 29%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp: In member function ‘virtual void gatb::core::tools::misc::impl::ProgressTimerAndSystem::fillBuffer(double)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:62: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 350 | snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 351 | _cpuinfo->getUsage(), 352 | mem, _memMax, memMaxProcess | ~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:68: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 350 | snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 351 | _cpuinfo->getUsage(), 352 | mem, _memMax, memMaxProcess | ~~~~~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:74: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 350 | snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 351 | _cpuinfo->getUsage(), 352 | mem, _memMax, memMaxProcess | ~~~~~~~~~~~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp: In member function ‘virtual void gatb::core::tools::misc::impl::Properties::setInt(const string&, const int64_t&)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp:438:42: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘int64_t’ {aka ‘long long int’} [-Wformat=] 438 | snprintf (buffer, sizeof(buffer), "%ld", value); | ~~^ ~~~~~ | | | | | int64_t {aka long long int} | long int | %lld In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:514:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 514 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:514:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 30%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/TimeInfo.cpp In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 30%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Tokenizer.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 [ 31%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Tool.cpp [ 31%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/XmlReader.cpp [ 31%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 [ 32%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ [ 32%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:514:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 514 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void Leon::decodeAnchorDict()’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::tools::storage::impl::SuperKmerBinFiles::SuperKmerBinFiles(const string&, const string&, size_t)’: /usr/include/c++/9/bits/stl_vector.h:921:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 921 | _M_fill_insert(end(), __new_size - size(), __x); | ^~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In member function ‘void Leon::startDecompression_setup()’: /usr/include/c++/9/bits/stl_vector.h:921:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 921 | _M_fill_insert(end(), __new_size - size(), __x); | ^~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:921:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 921 | _M_fill_insert(end(), __new_size - size(), __x); | ^~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:47, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:13:17: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:13:17: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:13:17: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:13:17: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp [ 34%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:3: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function ‘void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 372 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 374 | if(minimizer==get<2>(tuple)){ | ^~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 389 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 391 | ++indiceUnitigs; | ^~ /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 128; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:28:9: required from here /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:3: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function ‘void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 372 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 374 | if(minimizer==get<2>(tuple)){ | ^~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 389 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 391 | ++indiceUnitigs; | ^~ [ 35%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 32; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:28:9: required from here /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<32>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<32>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<32>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<32>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:3: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function ‘void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 372 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 374 | if(minimizer==get<2>(tuple)){ | ^~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 389 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 391 | ++indiceUnitigs; | ^~ [ 36%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 64; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:28:9: required from here /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 36%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<32>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<32>::KmerCanonical; unsigned int span = 32]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<128>&}; _Tp = gatb::core::debruijn::impl::markedSeq<128>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<32>&}; _Tp = gatb::core::debruijn::impl::markedSeq<32>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:47, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:47, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_val > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_val > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 128]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_iter > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/char_traits.h:39, from /usr/include/c++/9/string:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/api/ICell.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Cell.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algobase.h: In function ‘void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >]’: /usr/include/c++/9/bits/stl_algobase.h:123:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 123 | iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) | ^~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:123:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_iter > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 128]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<64>&}; _Tp = gatb::core::debruijn::impl::markedSeq<64>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 32]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 128]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:47, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1160 | } | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1160 | } | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:84:20: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 84 | std::iter_swap(__result, __b); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:86:20: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 86 | std::iter_swap(__result, __c); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:88:20: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 88 | std::iter_swap(__result, __a); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algobase.h:71, from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/predefined_ops.h: In function ‘bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]’: /usr/include/c++/9/bits/predefined_ops.h:42:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 42 | operator()(_Iterator1 __it1, _Iterator2 __it2) const | ^~~~~~~~ /usr/include/c++/9/bits/predefined_ops.h:42:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_val > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h:83:14: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 83 | if (__comp(__b, __c)) | ~~~~~~^~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:90:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 90 | else if (__comp(__a, __c)) | ~~~~~~^~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:85:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 85 | else if (__comp(__a, __c)) | ~~~~~~^~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:92:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 92 | else if (__comp(__b, __c)) | ~~~~~~^~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_iter > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 64]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In lambda function: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 64]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::prepare_uf(std::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]::UniquifyKeys]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:14, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 331 | } | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1160 | } | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]::InsertTravellerKmer]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<128>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<128>]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<32>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<32>]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 128]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In lambda function: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::prepare_uf(std::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 64]::UniquifyKeys]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:14, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 331 | } | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2247:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2247 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2248 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]::InsertTravellerKmer]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<64>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<64>]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 128]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 32]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 64]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp [ 39%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp [ 39%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:3: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function ‘void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 372 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 374 | if(minimizer==get<2>(tuple)){ | ^~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 389 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 391 | ++indiceUnitigs; | ^~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 128; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<128>::SuperKmer]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 96; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:28:9: required from here /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ [ 40%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp [ 40%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 40%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 40%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Configuration.cpp In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 32; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<>::SuperKmer]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/ConfigurationAlgorithm.cpp [ 41%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<96>&}; _Tp = gatb::core::debruijn::impl::markedSeq<96>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:47, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 [ 42%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 128]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_val > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 96]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_iter > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::execute() [with unsigned int span = 128]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 96]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 42%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/LinearCounter.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 96]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1160 | } | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ [ 42%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In lambda function: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 43%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<96>]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 96]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/ModelData.cpp [ 44%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp: In member function ‘void gatb::core::kmer::impl::Repartitor::printInfo()’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:308:41: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 308 | printf("Repartitor : nbMinimizers=%ld\n", nbMinimizers); | ~~^ ~~~~~~~~~~~~ | | | | | size_t {aka unsigned int} | long int | %d /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:309:73: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 309 | for (u_int64_t ii=0; ii>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Repartitor::itriple&}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Repartitor::itriple}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 78 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1910:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1910 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1911 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1910:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::Repartitor::computeDistrib(const gatb::core::kmer::impl::PartiInfo<5>&)’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 96]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp [ 44%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp [ 44%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp [ 45%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp [ 46%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ [ 46%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 64; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<64>::SuperKmer]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 96; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<96>::SuperKmer]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ [ 46%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 47%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.cpp [ 48%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp [ 48%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp: In constructor ‘gatb::core::system::impl::ThreadLinux::ThreadLinux(void* (*)(void*), void*)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp:51:7: warning: variable ‘ret’ set but not used [-Wunused-but-set-variable] 51 | int ret = pthread_attr_init ( &tattr ) ; | ^~~ [ 50%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/ThreadMacos.cpp [ 50%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp [ 51%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_destroy_data_aux(std::deque<_Tp, _Alloc>::iterator, std::deque<_Tp, _Alloc>::iterator) [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 854 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In destructor ‘std::deque<_Tp, _Alloc>::~deque() [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In function ‘json::JSON json::{anonymous}::parse_next(const string&, size_t&)’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 64]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1952:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1952 | __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~ /usr/include/c++/9/bits/stl_algo.h:1952:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_algo.h:4818:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 4818 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<4>]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 96]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::execute() [with unsigned int span = 64]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:27, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function ‘kmer_type DnaDecoder::extendAnchor(kmer_type, int, bool)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>]’: /usr/include/c++/9/bits/stl_algo.h:2236:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2236 | binary_search(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:2236:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<4>]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 69 | return std::binary_search (_items.begin(), _items.end(), item); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::execute() [with unsigned int span = 96]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:7: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateIncomingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void DnaEncoder::buildKmers()’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateOutgoingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h:4818:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 4818 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 51%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_destroy_data_aux(std::deque<_Tp, _Alloc>::iterator, std::deque<_Tp, _Alloc>::iterator) [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 854 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/stl_deque.h: In destructor ‘std::deque<_Tp, _Alloc>::~deque() [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/stl_deque.h: In function ‘json::JSON json::{anonymous}::parse_next(const string&, size_t&)’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 [ 52%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp [ 52%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_destroy_data_aux(std::deque<_Tp, _Alloc>::iterator, std::deque<_Tp, _Alloc>::iterator) [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 854 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In destructor ‘std::deque<_Tp, _Alloc>::~deque() [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 [ 52%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:71, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In function ‘json::JSON json::{anonymous}::parse_next(const string&, size_t&)’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<1>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<1>]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_destroy_data_aux(std::deque<_Tp, _Alloc>::iterator, std::deque<_Tp, _Alloc>::iterator) [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 854 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In destructor ‘std::deque<_Tp, _Alloc>::~deque() [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:514:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 514 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:514:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In function ‘json::JSON json::{anonymous}::parse_next(const string&, size_t&)’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_destroy_data_aux(std::deque<_Tp, _Alloc>::iterator, std::deque<_Tp, _Alloc>::iterator) [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 854 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In destructor ‘std::deque<_Tp, _Alloc>::~deque() [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 [ 53%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In function ‘json::JSON json::{anonymous}::parse_next(const string&, size_t&)’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<2>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1952:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1952 | __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~ /usr/include/c++/9/bits/stl_algo.h:1952:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_algo.h:4818:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 4818 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<2>]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 128; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:13:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable ‘abundance’ [-Wunused-variable] 310 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<2>]’: /usr/include/c++/9/bits/stl_algo.h:2236:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2236 | binary_search(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:2236:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<2>]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 69 | return std::binary_search (_items.begin(), _items.end(), item); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:7: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<64>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<64>::Count, gatb::core::tools::math::LargeInt<2> >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1952:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1952 | __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~ /usr/include/c++/9/bits/stl_algo.h:1952:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_algo.h:4818:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 4818 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<3>]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>]’: /usr/include/c++/9/bits/stl_algo.h:2236:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2236 | binary_search(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:2236:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<3>]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 69 | return std::binary_search (_items.begin(), _items.end(), item); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h:4818:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 4818 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:7: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<96>::Count, gatb::core::tools::math::LargeInt<3> >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h:4818:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 4818 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 53%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void Leon::decodeAnchorDict()’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In member function ‘void Leon::startDecompression_setup()’: /usr/include/c++/9/bits/stl_vector.h:921:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 921 | _M_fill_insert(end(), __new_size - size(), __x); | ^~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:921:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 921 | _M_fill_insert(end(), __new_size - size(), __x); | ^~~~~~~~~~~~~~ [ 54%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 32; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:13:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable ‘abundance’ [-Wunused-variable] 310 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ [ 54%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 64; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:13:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable ‘abundance’ [-Wunused-variable] 310 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ [ 55%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.hpp:26, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.cpp:21: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In constructor ‘Order0Model::Order0Model(int)’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 96; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:13:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable ‘abundance’ [-Wunused-variable] 310 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ [ 55%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.cpp [ 56%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Observer.cpp [ 56%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Algorithm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Algorithm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.cpp [ 56%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp [ 57%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp [ 57%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 57%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/api/IHistogram.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/api/IHistogram.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 58%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 58%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp: In member function ‘virtual void gatb::core::tools::misc::impl::ProgressTimerAndSystem::fillBuffer(double)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:62: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 350 | snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 351 | _cpuinfo->getUsage(), 352 | mem, _memMax, memMaxProcess | ~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:68: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 350 | snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 351 | _cpuinfo->getUsage(), 352 | mem, _memMax, memMaxProcess | ~~~~~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:74: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 350 | snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 351 | _cpuinfo->getUsage(), 352 | mem, _memMax, memMaxProcess | ~~~~~~~~~~~~~ | | | u_int64_t {aka long long unsigned int} [ 59%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp: In member function ‘virtual void gatb::core::tools::misc::impl::Properties::setInt(const string&, const int64_t&)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp:438:42: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘int64_t’ {aka ‘long long int’} [-Wformat=] 438 | snprintf (buffer, sizeof(buffer), "%ld", value); | ~~^ ~~~~~ | | | | | int64_t {aka long long int} | long int | %lld [ 59%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/TimeInfo.cpp [ 59%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Tokenizer.cpp [ 60%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Tool.cpp [ 60%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/XmlReader.cpp [ 61%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:514:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 514 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::tools::storage::impl::SuperKmerBinFiles::SuperKmerBinFiles(const string&, const string&, size_t)’: /usr/include/c++/9/bits/stl_vector.h:921:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 921 | _M_fill_insert(end(), __new_size - size(), __x); | ^~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:47, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.cpp In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 [ 61%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:13:17: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:7: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:7: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 [ 62%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:7: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:13:17: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:13:17: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 63%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:13:17: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 64%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp [ 64%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 65%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 65%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:18:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:18:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:3: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function ‘void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 372 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 374 | if(minimizer==get<2>(tuple)){ | ^~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 389 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 391 | ++indiceUnitigs; | ^~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 128; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:28:9: required from here /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 287 | __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 994 | copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, | ^~~~ /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 287 | __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 994 | copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, | ^~~~ /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::LargeInt<4>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::LargeInt<4>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2247:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2247 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2248 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2247:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2247 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2248 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 65%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp [ 65%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:18:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:18:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<128>&}; _Tp = gatb::core::debruijn::impl::markedSeq<128>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:47, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 287 | __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_val > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 994 | copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, | ^~~~ /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 287 | __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 128]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_iter > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 994 | copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, | ^~~~ /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 128]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<2>; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::LargeInt<2>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::LargeInt<2>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_algo.h:2247:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2247 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2248 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 128]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::LargeInt<3>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::LargeInt<3>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1160 | } | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2247:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2247 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2248 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2247:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2247 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2248 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<128>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<128>]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 128]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 128]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 67%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:3: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function ‘void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 372 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 374 | if(minimizer==get<2>(tuple)){ | ^~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 389 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 391 | ++indiceUnitigs; | ^~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 32; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:28:9: required from here /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<32>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<32>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<32>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<32>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:7: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<32>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<32>::KmerCanonical; unsigned int span = 32]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<32>&}; _Tp = gatb::core::debruijn::impl::markedSeq<32>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:47, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_val > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_iter > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/char_traits.h:39, from /usr/include/c++/9/string:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/api/ICell.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Cell.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algobase.h: In function ‘void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >]’: /usr/include/c++/9/bits/stl_algobase.h:123:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 123 | iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) | ^~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:123:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 32]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 78 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1910:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1910 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1911 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1910:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1160 | } | ^ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:84:20: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 84 | std::iter_swap(__result, __b); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:86:20: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 86 | std::iter_swap(__result, __c); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:88:20: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 88 | std::iter_swap(__result, __a); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In lambda function: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::prepare_uf(std::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]::UniquifyKeys]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<>::KmerCanonical; unsigned int span = 32]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:14, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 331 | } | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]::InsertTravellerKmer]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<32>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<32>]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 32]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 68%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp [ 68%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:3: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function ‘void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 372 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 374 | if(minimizer==get<2>(tuple)){ | ^~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 389 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 391 | ++indiceUnitigs; | ^~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 64; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:28:9: required from here /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<64>&}; _Tp = gatb::core::debruijn::impl::markedSeq<64>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:47, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_val > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_iter > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 64]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 64]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1160 | } | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In lambda function: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::prepare_uf(std::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 64]::UniquifyKeys]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:14, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 331 | } | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]::InsertTravellerKmer]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<64>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<64>]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 [ 68%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp [ 68%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 64]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 [ 68%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:3: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function ‘void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 372 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 374 | if(minimizer==get<2>(tuple)){ | ^~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 389 | else | ^~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 391 | ++indiceUnitigs; | ^~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 96; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:28:9: required from here /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 729 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<128>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ [ 69%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<96>&}; _Tp = gatb::core::debruijn::impl::markedSeq<96>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:47, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_val > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 96]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_iter > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 96]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, bool) [with unsigned int SPAN = 96]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1160 | } | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In lambda function: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<96>]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 96]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 729 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 96]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<32>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 [ 70%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp [ 70%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 128; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<128>::SuperKmer]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 729 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 729 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 128]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<64>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::execute() [with unsigned int span = 128]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<96>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 [ 71%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_128.cpp [ 71%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_32.cpp [ 72%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_64.cpp [ 72%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_96.cpp [ 72%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ [ 73%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 32; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<>::SuperKmer]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 64; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<64>::SuperKmer]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ [ 75%] Linking CXX static library ../lib/None/libgatbcore.a cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -P CMakeFiles/gatbcore-static.dir/cmake_clean_target.cmake cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatbcore-static.dir/link.txt --verbose=1 /usr/bin/ar qc ../lib/None/libgatbcore.a CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o 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CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o /usr/bin/ranlib ../lib/None/libgatbcore.a make[3]: Leaving directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' [ 75%] Built target gatbcore-static make -f test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make test/unit/CMakeFiles/gatb-core-cppunit.dir/depend make[3]: Entering directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core-1.4.1+dfsg/gatb-core /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit/CMakeFiles/gatb-core-cppunit.dir/DependInfo.cmake --color= Scanning dependencies of target gatb-core-cppunit make[3]: Leaving directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' make -f test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make test/unit/CMakeFiles/gatb-core-cppunit.dir/build make[3]: Entering directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' [ 76%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp [ 76%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp: In member function ‘void gatb::tests::TestBank::bank_checkSample1_aux(const string&, gatb::core::bank::impl::BankFasta::Iterator::CommentMode_e)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp:118:53: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 118 | snprintf (buffer, sizeof(buffer), "seq%ld%s", i+1, (mode == BankFasta::Iterator::FULL ? " generic" : "")); | ~~^ ~~~ | | | | | size_t {aka unsigned int} | long int | %d /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp: In member function ‘void gatb::tests::TestBank::bank_checkSample2_aux(const string&)’: /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp:187:53: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 187 | snprintf (buffer, sizeof(buffer), "seq%ld", nbSeq+1); | ~~^ ~~~~~~~ | | | | long int size_t {aka unsigned int} | %d /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp: In member function ‘void gatb::tests::TestBank::bank_perf1()’: /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp:678:25: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 678 | printf ("size=%ld time=%ld => rate=%.3f MB/s \n", | ~~^ | | | long int | %lld 679 | totalSize, t1-t0, | ~~~~~~~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp:678:35: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘gatb::core::system::ITime::Value’ {aka ‘long long unsigned int’} [-Wformat=] 678 | printf ("size=%ld time=%ld => rate=%.3f MB/s \n", | ~~^ | | | long int | %lld 679 | totalSize, t1-t0, | ~~~~~ | | | gatb::core::system::ITime::Value {aka long long unsigned int} In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]’ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 96; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<96>::SuperKmer]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1442 | while(uid<4 && skid < superKmerLen) | ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 1460 | if(skid >= superKmerLen) break; | ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 64]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::execute() [with unsigned int span = 64]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ [ 76%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/bank/TestLeon.cpp /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/bank/TestLeon.cpp:32: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 96]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::execute() [with unsigned int span = 96]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 76%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/bcalm/TestBcalm.cpp [ 76%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp [ 77%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/debruijn/TestDebruijn.cpp [ 78%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/debruijn/TestDebruijn.cpp:33: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_destroy_data_aux(std::deque<_Tp, _Alloc>::iterator, std::deque<_Tp, _Alloc>::iterator) [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 854 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In destructor ‘std::deque<_Tp, _Alloc>::~deque() [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In function ‘json::JSON json::{anonymous}::parse_next(const string&, size_t&)’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_destroy_data_aux(std::deque<_Tp, _Alloc>::iterator, std::deque<_Tp, _Alloc>::iterator) [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 854 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In destructor ‘std::deque<_Tp, _Alloc>::~deque() [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In function ‘json::JSON json::{anonymous}::parse_next(const string&, size_t&)’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 [ 78%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1952:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1952 | __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~ /usr/include/c++/9/bits/stl_algo.h:1952:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_algo.h:4818:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 4818 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<4>]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 78%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/debruijn/TestDebruijnUnitigs.cpp /usr/include/c++/9/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>]’: /usr/include/c++/9/bits/stl_algo.h:2236:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2236 | binary_search(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:2236:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<4>]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 69 | return std::binary_search (_items.begin(), _items.end(), item); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<1>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<1>]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:7: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateIncomingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateOutgoingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h:4818:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 4818 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/debruijn/TestDebruijnUnitigs.cpp:33: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp [ 79%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_destroy_data_aux(std::deque<_Tp, _Alloc>::iterator, std::deque<_Tp, _Alloc>::iterator) [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 854 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In destructor ‘std::deque<_Tp, _Alloc>::~deque() [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In function ‘json::JSON json::{anonymous}::parse_next(const string&, size_t&)’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 128; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:13:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable ‘abundance’ [-Wunused-variable] 310 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 [ 80%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/debruijn/TestSimplifications.cpp In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<2>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1952:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1952 | __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~ /usr/include/c++/9/bits/stl_algo.h:1952:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_algo.h:4818:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 4818 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<2>]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<2>]’: /usr/include/c++/9/bits/stl_algo.h:2236:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2236 | binary_search(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:2236:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<2>]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 69 | return std::binary_search (_items.begin(), _items.end(), item); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:7: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<64>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<64>::Count, gatb::core::tools::math::LargeInt<2> >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/debruijn/TestSimplifications.cpp:33: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h:4818:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 4818 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_destroy_data_aux(std::deque<_Tp, _Alloc>::iterator, std::deque<_Tp, _Alloc>::iterator) [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 854 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In destructor ‘std::deque<_Tp, _Alloc>::~deque() [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In function ‘json::JSON json::{anonymous}::parse_next(const string&, size_t&)’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 32; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:13:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable ‘abundance’ [-Wunused-variable] 310 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ [ 80%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/debruijn/TestSimplificationsUnitigs.cpp In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 [ 81%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1952:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1952 | __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~ /usr/include/c++/9/bits/stl_algo.h:1952:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_algo.h:4818:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 4818 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<3>]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>]’: /usr/include/c++/9/bits/stl_algo.h:2236:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2236 | binary_search(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:2236:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<3>]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 69 | return std::binary_search (_items.begin(), _items.end(), item); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/debruijn/TestSimplificationsUnitigs.cpp:33: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:7: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<96>::Count, gatb::core::tools::math::LargeInt<3> >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 64; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:13:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable ‘abundance’ [-Wunused-variable] 310 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h:4818:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 4818 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp [ 82%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestDSK.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 96; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:13:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable ‘abundance’ [-Wunused-variable] 310 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ [ 83%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp [ 83%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 84%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 84%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:25: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:25: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/deque:69, from /usr/include/cppunit/Message.h:11, from /usr/include/cppunit/Exception.h:5, from /usr/include/cppunit/TestAssert.h:5, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:26, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:19: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_destroy_data_aux(std::deque<_Tp, _Alloc>::iterator, std::deque<_Tp, _Alloc>::iterator) [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 854 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:854:6: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/cppunit/Message.h:11, from /usr/include/cppunit/Exception.h:5, from /usr/include/cppunit/TestAssert.h:5, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:26, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:19: /usr/include/c++/9/bits/stl_deque.h: In destructor ‘std::deque<_Tp, _Alloc>::~deque() [with _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/set:60, from /usr/include/cppunit/extensions/TestFactoryRegistry.h:11, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:19: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /usr/include/cppunit/XmlOutputter.h:13, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:19: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:25: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/cppunit/Message.h:11, from /usr/include/cppunit/Exception.h:5, from /usr/include/cppunit/TestAssert.h:5, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:26, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:19: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:25: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/cppunit/Message.h:11, from /usr/include/cppunit/Exception.h:5, from /usr/include/cppunit/TestAssert.h:5, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:26, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:19: /usr/include/c++/9/bits/stl_deque.h: In function ‘json::JSON json::{anonymous}::parse_next(const string&, size_t&)’: /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 2114 | _M_destroy_data_aux(__first, __last); | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_deque.h:2114:4: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 [ 84%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestKmer.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 [ 85%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestKmerBank.cpp In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 85%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestMPHF.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/kmer/TestMPHF.cpp:27: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:7: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:7: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:7: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 86%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/main.cpp In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 86%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/system/TestSystem.cpp /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 86%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/collections/TestBag.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/collections/TestCollection.cpp In file included from /usr/include/c++/9/set:60, from /usr/include/cppunit/extensions/TestFactoryRegistry.h:11, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/collections/TestCollection.cpp:19: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /usr/include/cppunit/XmlOutputter.h:13, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/collections/TestCollection.cpp:19: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/collections/TestCollection.cpp:23: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/cppunit/Message.h:11, from /usr/include/cppunit/Exception.h:5, from /usr/include/cppunit/TestAssert.h:5, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:26, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/collections/TestCollection.cpp:19: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/collections/TestCollection.cpp:23: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 [ 87%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp [ 87%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp [ 87%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/collections/TestContainer.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:18:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u [ 88%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 287 | __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 994 | copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, | ^~~~ /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 89%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/collections/TestIterable.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:18:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::LargeInt<4>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::LargeInt<4>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 89%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/collections/TestMap.cpp In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/collections/TestMap.cpp:24: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2247:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2247 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2248 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 287 | __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 994 | copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, | ^~~~ /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 [ 89%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:18:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2247:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2247 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2248 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 287 | __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 994 | copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, | ^~~~ /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 90%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/designpattern/TestIterators.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:18:16: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<2>; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::LargeInt<2>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::LargeInt<2>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_algo.h:2247:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2247 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2248 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2247:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2247 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2248 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 287 | __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 994 | copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, | ^~~~ /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 [ 90%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp /usr/include/c++/9/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:994:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::LargeInt<3>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::LargeInt<3>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 766 | deque<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:766:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 789 | std::copy(__first, __last, __pos - difference_type(__n)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:789:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 421 | return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:421:38: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 800 | std::copy(__mid, __last, __old_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:800:16: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 829 | std::copy(__first, __last, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:829:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:66, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 388 | _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ 389 | __result, | ~~~~~~~~~ 390 | __alloc); | ~~~~~~~~ /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_uninitialized.h:388:59: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ In file included from /usr/include/c++/9/deque:69, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 840 | std::copy(__first, __mid, __pos); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:840:14: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 117 | _M_erase_at_end(std::copy(__x.begin(), __x.end(), | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 122 | std::copy(__x.begin(), __mid, this->_M_impl._M_start); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:122:17: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 604 | std::__uninitialized_copy_a(__first, __last, __new_start, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:604:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 620 | std::__uninitialized_copy_a(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 621 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 622 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/9/bits/deque.tcc:620:30: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 [ 91%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/math/TestMath.cpp In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::set(const Key&, const Value&) [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2247:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2247 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2248 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 [ 91%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 91%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/misc/TestMisc.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:7: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 92%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o -c /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:23: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:31: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /usr/include/cppunit/extensions/TestFactoryRegistry.h:11, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:24, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:19: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /usr/include/cppunit/XmlOutputter.h:13, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:19: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:23: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/deque:67, from /usr/include/cppunit/Message.h:11, from /usr/include/cppunit/Exception.h:5, from /usr/include/cppunit/TestAssert.h:5, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:26, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:19: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:23: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 78 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 [ 92%] Linking CXX executable ../../bin/None/gatb-core-cppunit cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatb-core-cppunit.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o -o ../../bin/None/gatb-core-cppunit -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial: ../../lib/None/libgatbcore.a -ldl -lpthread -lz /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lcppunit In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1910:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1910 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1911 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1910:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<>::KmerCanonical; unsigned int span = 32]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x1b0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0xc): multiple definition of `typeinfo for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x368): multiple definition of `typeinfo name for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x368): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x18): multiple definition of `typeinfo for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x520): multiple definition of `typeinfo name for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x520): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x24): multiple definition of `typeinfo for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x24): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x6d4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x30): multiple definition of `typeinfo for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x884): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x3c): multiple definition of `typeinfo for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xa38): multiple definition of `typeinfo name for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x364): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x48): multiple definition of `typeinfo for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.data.rel.ro+0x8): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization8.cpp.in_32.cpp.o):(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization8.cpp.in_32.cpp.o):(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_32.cpp.o):(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_32.cpp.o):(.data.rel.ro+0x8): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x1b0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0xc): multiple definition of `typeinfo for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x368): multiple definition of `typeinfo name for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x368): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x18): multiple definition of `typeinfo for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x520): multiple definition of `typeinfo name for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x520): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x24): multiple definition of `typeinfo for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x24): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x6d4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x30): multiple definition of `typeinfo for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x884): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x3c): multiple definition of `typeinfo for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xa38): multiple definition of `typeinfo name for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x364): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x48): multiple definition of `typeinfo for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xbf0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xbf0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x54): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x54): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xda0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xda0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x5c): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x5c): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xf58): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xf58): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x68): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x68): first defined here collect2: error: ld returned 1 exit status make[3]: *** [test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make:425: bin/None/gatb-core-cppunit] Error 1 make[3]: Leaving directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' make[2]: *** [CMakeFiles/Makefile2:338: test/unit/CMakeFiles/gatb-core-cppunit.dir/all] Error 2 make[2]: *** Waiting for unfinished jobs.... [ 93%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 93%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2445:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2445 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In copy constructor ‘json::JSON::JSON(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 139 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:139:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 In file included from /usr/include/c++/9/deque:67, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_deque.h: In constructor ‘std::deque<_Tp, _Alloc>::deque(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = std::_Deque_iterator; = void; _Tp = json::JSON; _Alloc = std::allocator]’: /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 1047 | deque(_InputIterator __first, _InputIterator __last, | ^~~~~ /usr/include/c++/9/bits/stl_deque.h:1047:2: note: parameter passing for argument of type ‘std::_Deque_iterator’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionFile.hpp:38, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageFile.hpp:34, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:510, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp: In member function ‘json::JSON& json::JSON::operator=(const json::JSON&)’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 162 | other.Internal.List->end() ); | ^ /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/json/json.hpp:162:66: note: parameter passing for argument of type ‘std::deque::iterator’ {aka ‘std::_Deque_iterator’} changed in GCC 7.1 [ 94%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2180:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2180 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 [ 94%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1854 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1855 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h:1854:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 729 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 729 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<128>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<32>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2927 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:773:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 773 | { return erase(const_iterator(__it)); } | ^ [ 95%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 729 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 729 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:729:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1159:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1159 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 427 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:427:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<64>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<96>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1810:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1810 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1829 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1829:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1929 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1929:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1943:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1943 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1661:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1661 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:122:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 122 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1957:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1957 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1958 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1959 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1874:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1874 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1879:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1879 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 95%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_128.cpp [ 96%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_32.cpp [ 96%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_64.cpp [ 96%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_96.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1626 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1626:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 [ 97%] Linking CXX shared library ../lib/None/libgatbcore.so cd /<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatbcore-dynamic.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libgatbcore.so.0 -o ../lib/None/libgatbcore.so.0 CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o 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CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here collect2: error: ld returned 1 exit status make[3]: *** [src/CMakeFiles/gatbcore-dynamic.dir/build.make:1587: lib/None/libgatbcore.so.0] Error 1 make[3]: Leaving directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' make[2]: *** [CMakeFiles/Makefile2:192: src/CMakeFiles/gatbcore-dynamic.dir/all] Error 2 make[2]: Leaving directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' make[1]: *** [Makefile:155: all] Error 2 make[1]: Leaving directory '/<>/gatb-core-1.4.1+dfsg/obj-arm-linux-gnueabihf' dh_auto_build: cd obj-arm-linux-gnueabihf && make V=1 -j4 "INSTALL=install --strip-program=true" returned exit code 2 make: *** [debian/rules:10: build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 20190110-0459 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build-Space: 1335012 Build-Time: 1654 Distribution: disco Fail-Stage: build Host Architecture: armhf Install-Time: 42 Job: gatb-core_1.4.1+dfsg-2.dsc Machine Architecture: arm64 Package: gatb-core Package-Time: 1698 Source-Version: 1.4.1+dfsg-2 Space: 1335012 Status: attempted Version: 1.4.1+dfsg-2 -------------------------------------------------------------------------------- Finished at 20190110-0459 Build needed 00:28:18, 1335012k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=armhf PACKAGEBUILD-15917389 Scanning for processes to kill in build PACKAGEBUILD-15917389