https://launchpad.net/ubuntu/+archive/test-rebuild-20190614-gcc9/+build/17091121 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-059 4.4.0-161-generic #189-Ubuntu SMP Tue Aug 27 08:12:37 UTC 2019 aarch64 Buildd toolchain package versions: launchpad-buildd_177 python-lpbuildd_177 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 17 Sep 08:56:46 ntpdate[1919]: adjust time server 10.211.37.1 offset 0.006014 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=eoan --arch=arm64 PACKAGEBUILD-17091121 --image-type chroot /home/buildd/filecache-default/b148568f42c06950756bf7fea120011aafea366b Creating target for build PACKAGEBUILD-17091121 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=eoan --arch=arm64 PACKAGEBUILD-17091121 Starting target for build PACKAGEBUILD-17091121 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=eoan --arch=arm64 PACKAGEBUILD-17091121 'deb http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu eoan main' 'deb http://ftpmaster.internal/ubuntu eoan main restricted universe multiverse' Overriding sources.list in build-PACKAGEBUILD-17091121 RUN: /usr/share/launchpad-buildd/bin/in-target add-trusted-keys --backend=chroot --series=eoan --arch=arm64 PACKAGEBUILD-17091121 Adding trusted keys to build-PACKAGEBUILD-17091121 Warning: apt-key output should not be parsed (stdout is not a terminal) OK Warning: apt-key output should not be parsed (stdout is not a terminal) /etc/apt/trusted.gpg -------------------- pub rsa1024 2009-10-22 [SC] 60C3 1780 3A41 BA51 845E 371A 1E93 77A2 BA9E F27F uid [ unknown] Launchpad Toolchain builds /etc/apt/trusted.gpg.d/ubuntu-keyring-2012-archive.gpg ------------------------------------------------------ pub rsa4096 2012-05-11 [SC] 790B C727 7767 219C 42C8 6F93 3B4F E6AC C0B2 1F32 uid [ unknown] Ubuntu Archive Automatic Signing Key (2012) /etc/apt/trusted.gpg.d/ubuntu-keyring-2012-cdimage.gpg ------------------------------------------------------ pub rsa4096 2012-05-11 [SC] 8439 38DF 228D 22F7 B374 2BC0 D94A A3F0 EFE2 1092 uid [ unknown] Ubuntu CD Image Automatic Signing Key (2012) /etc/apt/trusted.gpg.d/ubuntu-keyring-2018-archive.gpg ------------------------------------------------------ pub rsa4096 2018-09-17 [SC] F6EC B376 2474 EDA9 D21B 7022 8719 20D1 991B C93C uid [ unknown] Ubuntu Archive Automatic Signing Key (2018) RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=eoan --arch=arm64 PACKAGEBUILD-17091121 Updating target for build PACKAGEBUILD-17091121 Get:1 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu eoan InRelease [15.4 kB] Get:2 http://ftpmaster.internal/ubuntu eoan InRelease [255 kB] Get:3 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu eoan/main arm64 Packages [2820 B] Get:4 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu eoan/main Translation-en [4848 B] Get:5 http://ftpmaster.internal/ubuntu eoan/main arm64 Packages [936 kB] Get:6 http://ftpmaster.internal/ubuntu eoan/main Translation-en [504 kB] Get:7 http://ftpmaster.internal/ubuntu eoan/restricted arm64 Packages [1064 B] Get:8 http://ftpmaster.internal/ubuntu eoan/restricted Translation-en [4836 B] Get:9 http://ftpmaster.internal/ubuntu eoan/universe arm64 Packages [8678 kB] Get:10 http://ftpmaster.internal/ubuntu eoan/universe Translation-en [5224 kB] Get:11 http://ftpmaster.internal/ubuntu eoan/multiverse arm64 Packages [121 kB] Get:12 http://ftpmaster.internal/ubuntu eoan/multiverse Translation-en [111 kB] Fetched 15.9 MB in 7s (2149 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: logsave The following packages will be upgraded: binutils binutils-aarch64-linux-gnu binutils-common build-essential coreutils cpp cpp-9 dpkg dpkg-dev e2fsprogs g++ g++-9 gcc gcc-9 gcc-9-base libapparmor1 libasan5 libatomic1 libbinutils libc-bin libc-dev-bin libc6 libc6-dev libcc1-0 libcom-err2 libdevmapper1.02.1 libdpkg-perl libext2fs2 libgcc-9-dev libgcc1 libgnutls30 libgomp1 libip4tc2 libisl21 libitm1 liblsan0 libp11-kit0 libsqlite3-0 libss2 libstdc++-9-dev libstdc++6 libtsan0 libubsan1 linux-libc-dev login passwd 46 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 46.7 MB of archives. After this operation, 814 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu eoan/main arm64 coreutils arm64 8.30-3ubuntu2 [1174 kB] Get:2 http://ftpmaster.internal/ubuntu eoan/main arm64 dpkg arm64 1.19.7ubuntu2 [1115 kB] Get:3 http://ftpmaster.internal/ubuntu eoan/main arm64 login arm64 1:4.5-1.1ubuntu4 [261 kB] Get:4 http://ftpmaster.internal/ubuntu eoan/main arm64 libc6-dev arm64 2.30-0ubuntu1 [2091 kB] Get:5 http://ftpmaster.internal/ubuntu eoan/main arm64 libc-dev-bin arm64 2.30-0ubuntu1 [64.2 kB] Get:6 http://ftpmaster.internal/ubuntu eoan/main arm64 linux-libc-dev arm64 5.3.0-10.11 [1042 kB] Get:7 http://ftpmaster.internal/ubuntu eoan/main arm64 libcc1-0 arm64 9.2.1-8ubuntu1 [46.5 kB] Get:8 http://ftpmaster.internal/ubuntu eoan/main arm64 binutils-aarch64-linux-gnu arm64 2.32.51.20190905-0ubuntu1 [2022 kB] Get:9 http://ftpmaster.internal/ubuntu eoan/main arm64 libbinutils arm64 2.32.51.20190905-0ubuntu1 [471 kB] Get:10 http://ftpmaster.internal/ubuntu eoan/main arm64 binutils-common arm64 2.32.51.20190905-0ubuntu1 [203 kB] Get:11 http://ftpmaster.internal/ubuntu eoan/main arm64 binutils arm64 2.32.51.20190905-0ubuntu1 [3392 B] Get:12 http://ftpmaster.internal/ubuntu eoan/main arm64 gcc-9-base arm64 9.2.1-8ubuntu1 [19.2 kB] Get:13 http://ftpmaster.internal/ubuntu eoan/main arm64 libgcc1 arm64 1:9.2.1-8ubuntu1 [34.1 kB] Get:14 http://ftpmaster.internal/ubuntu eoan/main arm64 libgomp1 arm64 9.2.1-8ubuntu1 [80.5 kB] Get:15 http://ftpmaster.internal/ubuntu eoan/main arm64 libitm1 arm64 9.2.1-8ubuntu1 [25.0 kB] Get:16 http://ftpmaster.internal/ubuntu eoan/main arm64 libatomic1 arm64 9.2.1-8ubuntu1 [9172 B] Get:17 http://ftpmaster.internal/ubuntu eoan/main arm64 libasan5 arm64 9.2.1-8ubuntu1 [365 kB] Get:18 http://ftpmaster.internal/ubuntu eoan/main arm64 liblsan0 arm64 9.2.1-8ubuntu1 [126 kB] Get:19 http://ftpmaster.internal/ubuntu eoan/main arm64 libtsan0 arm64 9.2.1-8ubuntu1 [283 kB] Get:20 http://ftpmaster.internal/ubuntu eoan/main arm64 libubsan1 arm64 9.2.1-8ubuntu1 [121 kB] Get:21 http://ftpmaster.internal/ubuntu eoan/main arm64 g++-9 arm64 9.2.1-8ubuntu1 [9437 kB] Get:22 http://ftpmaster.internal/ubuntu eoan/main arm64 libstdc++-9-dev arm64 9.2.1-8ubuntu1 [1673 kB] Get:23 http://ftpmaster.internal/ubuntu eoan/main arm64 libgcc-9-dev arm64 9.2.1-8ubuntu1 [914 kB] Get:24 http://ftpmaster.internal/ubuntu eoan/main arm64 gcc-9 arm64 9.2.1-8ubuntu1 [9062 kB] Get:25 http://ftpmaster.internal/ubuntu eoan/main arm64 cpp-9 arm64 9.2.1-8ubuntu1 [8312 kB] Get:26 http://ftpmaster.internal/ubuntu eoan/main arm64 libstdc++6 arm64 9.2.1-8ubuntu1 [467 kB] Get:27 http://ftpmaster.internal/ubuntu eoan/main arm64 libisl21 arm64 0.21-2 [521 kB] Get:28 http://ftpmaster.internal/ubuntu eoan/main arm64 libc6 arm64 2.30-0ubuntu1 [2271 kB] Get:29 http://ftpmaster.internal/ubuntu eoan/main arm64 libc-bin arm64 2.30-0ubuntu1 [476 kB] Get:30 http://ftpmaster.internal/ubuntu eoan/main arm64 libext2fs2 arm64 1.45.3-4ubuntu1 [174 kB] Get:31 http://ftpmaster.internal/ubuntu eoan/main arm64 e2fsprogs arm64 1.45.3-4ubuntu1 [502 kB] Get:32 http://ftpmaster.internal/ubuntu eoan/main arm64 logsave arm64 1.45.3-4ubuntu1 [9584 B] Get:33 http://ftpmaster.internal/ubuntu eoan/main arm64 passwd arm64 1:4.5-1.1ubuntu4 [791 kB] Get:34 http://ftpmaster.internal/ubuntu eoan/main arm64 libp11-kit0 arm64 0.23.17-2 [177 kB] Get:35 http://ftpmaster.internal/ubuntu eoan/main arm64 libgnutls30 arm64 3.6.9-4build1 [721 kB] Get:36 http://ftpmaster.internal/ubuntu eoan/main arm64 libcom-err2 arm64 1.45.3-4ubuntu1 [8712 B] Get:37 http://ftpmaster.internal/ubuntu eoan/main arm64 libss2 arm64 1.45.3-4ubuntu1 [10.7 kB] Get:38 http://ftpmaster.internal/ubuntu eoan/main arm64 libapparmor1 arm64 2.13.3-5ubuntu1 [34.3 kB] Get:39 http://ftpmaster.internal/ubuntu eoan/main arm64 libdevmapper1.02.1 arm64 2:1.02.155-2ubuntu6 [110 kB] Get:40 http://ftpmaster.internal/ubuntu eoan/main arm64 libsqlite3-0 arm64 3.29.0-2 [494 kB] Get:41 http://ftpmaster.internal/ubuntu eoan/main arm64 g++ arm64 4:9.2.1-3.1ubuntu1 [1596 B] Get:42 http://ftpmaster.internal/ubuntu eoan/main arm64 gcc arm64 4:9.2.1-3.1ubuntu1 [5228 B] Get:43 http://ftpmaster.internal/ubuntu eoan/main arm64 cpp arm64 4:9.2.1-3.1ubuntu1 [27.6 kB] Get:44 http://ftpmaster.internal/ubuntu eoan/main arm64 dpkg-dev all 1.19.7ubuntu2 [679 kB] Get:45 http://ftpmaster.internal/ubuntu eoan/main arm64 libdpkg-perl all 1.19.7ubuntu2 [230 kB] Get:46 http://ftpmaster.internal/ubuntu eoan/main arm64 build-essential arm64 12.7ubuntu1 [4644 B] Get:47 http://ftpmaster.internal/ubuntu eoan/main arm64 libip4tc2 arm64 1.8.3-2ubuntu4 [20.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 46.7 MB in 2s (25.2 MB/s) (Reading database ... 12720 files and directories currently installed.) Preparing to unpack .../coreutils_8.30-3ubuntu2_arm64.deb ... Unpacking coreutils (8.30-3ubuntu2) over (8.30-3ubuntu1) ... Setting up coreutils (8.30-3ubuntu2) ... (Reading database ... 12720 files and directories currently installed.) Preparing to unpack .../dpkg_1.19.7ubuntu2_arm64.deb ... Unpacking dpkg (1.19.7ubuntu2) over (1.19.7ubuntu1) ... Setting up dpkg (1.19.7ubuntu2) ... (Reading database ... 12720 files and directories currently installed.) Preparing to unpack .../login_1%3a4.5-1.1ubuntu4_arm64.deb ... Unpacking login (1:4.5-1.1ubuntu4) over (1:4.5-1.1ubuntu3) ... Setting up login (1:4.5-1.1ubuntu4) ... (Reading database ... 12720 files and directories currently installed.) Preparing to unpack .../0-libc6-dev_2.30-0ubuntu1_arm64.deb ... Unpacking libc6-dev:arm64 (2.30-0ubuntu1) over (2.29-0ubuntu3) ... Preparing to unpack .../1-libc-dev-bin_2.30-0ubuntu1_arm64.deb ... Unpacking libc-dev-bin (2.30-0ubuntu1) over (2.29-0ubuntu3) ... 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Setting up libip4tc2:arm64 (1.8.3-2ubuntu4) ... Setting up libisl21:arm64 (0.21-2) ... Setting up libapparmor1:arm64 (2.13.3-5ubuntu1) ... Setting up libsqlite3-0:arm64 (3.29.0-2) ... Setting up binutils-common:arm64 (2.32.51.20190905-0ubuntu1) ... Setting up linux-libc-dev:arm64 (5.3.0-10.11) ... Setting up libcom-err2:arm64 (1.45.3-4ubuntu1) ... Setting up libgomp1:arm64 (9.2.1-8ubuntu1) ... Setting up libasan5:arm64 (9.2.1-8ubuntu1) ... Setting up libatomic1:arm64 (9.2.1-8ubuntu1) ... Setting up libss2:arm64 (1.45.3-4ubuntu1) ... Setting up libdpkg-perl (1.19.7ubuntu2) ... Setting up logsave (1.45.3-4ubuntu1) ... Setting up libubsan1:arm64 (9.2.1-8ubuntu1) ... Setting up libdevmapper1.02.1:arm64 (2:1.02.155-2ubuntu6) ... Setting up cpp-9 (9.2.1-8ubuntu1) ... Setting up libbinutils:arm64 (2.32.51.20190905-0ubuntu1) ... Setting up libc-dev-bin (2.30-0ubuntu1) ... Setting up libcc1-0:arm64 (9.2.1-8ubuntu1) ... Setting up liblsan0:arm64 (9.2.1-8ubuntu1) ... Setting up libitm1:arm64 (9.2.1-8ubuntu1) ... Setting up libtsan0:arm64 (9.2.1-8ubuntu1) ... Setting up binutils-aarch64-linux-gnu (2.32.51.20190905-0ubuntu1) ... Setting up e2fsprogs (1.45.3-4ubuntu1) ... Installing new version of config file /etc/cron.d/e2scrub_all ... Installing new version of config file /etc/e2scrub.conf ... Setting up binutils (2.32.51.20190905-0ubuntu1) ... Setting up dpkg-dev (1.19.7ubuntu2) ... Setting up libgcc-9-dev:arm64 (9.2.1-8ubuntu1) ... Setting up cpp (4:9.2.1-3.1ubuntu1) ... Setting up libc6-dev:arm64 (2.30-0ubuntu1) ... Setting up gcc-9 (9.2.1-8ubuntu1) ... Setting up libstdc++-9-dev:arm64 (9.2.1-8ubuntu1) ... Setting up gcc (4:9.2.1-3.1ubuntu1) ... Setting up g++-9 (9.2.1-8ubuntu1) ... Setting up g++ (4:9.2.1-3.1ubuntu1) ... Setting up build-essential (12.7ubuntu1) ... Processing triggers for libc-bin (2.30-0ubuntu1) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-17091121 arm64 eoan -c chroot:build-PACKAGEBUILD-17091121 --arch=arm64 --dist=eoan --nolog 'lammps_0~20181211.gitad1b1897d+dfsg1-2.dsc' Initiating build PACKAGEBUILD-17091121 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-161-generic #189-Ubuntu SMP Tue Aug 27 08:12:37 UTC 2019 aarch64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-059.buildd +==============================================================================+ | lammps 0~20181211.gitad1b1897d+dfsg1-2 (arm64) 17 Sep 2019 08:57 | +==============================================================================+ Package: lammps Version: 0~20181211.gitad1b1897d+dfsg1-2 Source Version: 0~20181211.gitad1b1897d+dfsg1-2 Distribution: eoan Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 I: NOTICE: Log filtering will replace 'build/lammps-1dUdqd/lammps-0~20181211.gitad1b1897d+dfsg1' with '<>' I: NOTICE: Log filtering will replace 'build/lammps-1dUdqd' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-17091121/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- lammps_0~20181211.gitad1b1897d+dfsg1-2.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-_SwW1r/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-_SwW1r/apt_archive ./ InRelease Get:2 copy:/<>/resolver-_SwW1r/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-_SwW1r/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-_SwW1r/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-_SwW1r/apt_archive ./ Packages [524 B] Fetched 2857 B in 0s (111 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-_SwW1r/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12734 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 11~), libeigen3-dev, cmake, gfortran | fortran-compiler, libfftw3-dev, libjpeg-dev, mpi-default-bin, mpi-default-dev, libpython-dev, libsymspg-dev, libavcodec-dev, libnetcdf-dev, libvtk6-dev, voro++-dev, ocl-icd-opencl-dev Filtered Build-Depends: debhelper (>= 11~), libeigen3-dev, cmake, gfortran | fortran-compiler, libfftw3-dev, libjpeg-dev, mpi-default-bin, mpi-default-dev, libpython-dev, libsymspg-dev, libavcodec-dev, libnetcdf-dev, libvtk6-dev, voro++-dev, ocl-icd-opencl-dev dpkg-deb: building package 'sbuild-build-depends-lammps-dummy' in '/<>/resolver-qOZplO/apt_archive/sbuild-build-depends-lammps-dummy.deb'. Ign:1 copy:/<>/resolver-qOZplO/apt_archive ./ InRelease Get:2 copy:/<>/resolver-qOZplO/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-qOZplO/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-qOZplO/apt_archive ./ Sources [315 B] Get:5 copy:/<>/resolver-qOZplO/apt_archive ./ Packages [641 B] Fetched 3075 B in 0s (141 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install lammps build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data cython debhelper default-libmysqlclient-dev dh-autoreconf dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core gdal-data gettext gettext-base gfortran gfortran-9 groff-base hdf5-helpers ibverbs-providers icu-devtools intltool-debian iso-codes libaec-dev libaec0 libaom0 libarchive-zip-perl libarchive13 libarmadillo-dev libarmadillo9 libarpack2 libarpack2-dev libasn1-8-heimdal libavahi-client3 libavahi-common-data libavahi-common3 libavcodec-dev libavcodec58 libavformat-dev libavformat58 libavutil-dev libavutil56 libblas-dev libblas3 libbluray2 libboost-dev libboost1.67-dev libbrotli1 libbsd0 libcairo2 libcap2-bin libcharls-dev libcharls2 libchromaprint1 libcodec2-0.8.1 libcroco3 libcups2 libcurl3-gnutls libcurl4 libcurl4-gnutls-dev libdap-dev libdap25 libdapclient6v5 libdapserver7v5 libdatrie1 libdbus-1-3 libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-dev libdrm-etnaviv1 libdrm-freedreno1 libdrm-nouveau2 libdrm-radeon1 libdrm-tegra0 libdrm2 libedit2 libegl-mesa0 libegl1 libeigen3-dev libelf1 libepsilon-dev libepsilon1 libevdev2 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-single3 libfile-stripnondeterminism-perl libfontconfig1 libfontconfig1-dev libfreetype6 libfreetype6-dev libfreexl-dev libfreexl1 libfribidi0 libfyba-dev libfyba0 libgbm1 libgdal-dev libgdal20 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgeos-3.7.2 libgeos-c1v5 libgeos-dev libgeotiff-dev libgeotiff2 libgfortran-9-dev libgfortran5 libgif-dev libgif7 libgl1 libgl1-mesa-dev libgl1-mesa-dri libgl2ps-dev libgl2ps1.4 libglapi-mesa libgles1 libgles2 libglib2.0-0 libglu1-mesa libglu1-mesa-dev libglvnd-core-dev libglvnd-dev libglvnd0 libglx-mesa0 libglx0 libgme0 libgraphite2-3 libgsm1 libgssapi-krb5-2 libgssapi3-heimdal libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgudev-1.0-0 libharfbuzz0b libhcrypto4-heimdal libhdf4-0-alt libhdf4-alt-dev libhdf5-103 libhdf5-cpp-103 libhdf5-dev libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev libheimbase1-heimdal libheimntlm0-heimdal libhwloc-dev libhwloc-plugins libhwloc5 libhx509-5-heimdal libhyphen0 libibverbs-dev libibverbs1 libice-dev libice6 libicu-dev libicu63 libinput-bin libinput10 libjbig-dev libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjs-sphinxdoc libjs-underscore libjson-c-dev libjsoncpp-dev libjsoncpp1 libk5crypto3 libkeyutils1 libkml-dev libkmlbase1 libkmlconvenience1 libkmldom1 libkmlengine1 libkmlregionator1 libkmlxsd1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libldap-2.4-2 libldap-common libllvm8 libltdl-dev libltdl7 liblzma-dev libmagic-mgc libmagic1 libminizip-dev libminizip1 libmp3lame0 libmpg123-0 libmtdev1 libmysqlclient-dev libmysqlclient21 libnetcdf-c++4 libnetcdf-cxx-legacy-dev libnetcdf-dev libnetcdf13 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnspr4 libnss3 libnuma-dev libnuma1 libodbc1 libogdi-dev libogdi4.1 libogg-dev libogg0 libopengl0 libopenjp2-7 libopenjp2-7-dev libopenmpi-dev libopenmpi3 libopenmpt0 libopus0 liborc-0.4-0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcre16-3 libpcre2-16-0 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpmix2 libpng-dev libpoppler-dev libpoppler-private-dev libpoppler90 libpq-dev libpq5 libproj-dev libproj13 libpsl5 libpthread-stubs0-dev libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libqhull-dev libqhull-r7 libqhull7 libqt5core5a libqt5dbus5 libqt5gui5 libqt5network5 libqt5opengl5 libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 libqt5sensors5 libqt5webchannel5 libqt5webkit5 libqt5widgets5 librhash0 libroken18-heimdal librsvg2-2 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libshine3 libsigsegv2 libsm-dev libsm6 libsnappy1v5 libsodium23 libsoxr0 libspatialite-dev libspatialite7 libspeex1 libsqlite3-dev libssh-4 libssh-gcrypt-4 libssl-dev libsub-override-perl libsuperlu-dev libsuperlu5 libswresample-dev libswresample3 libswscale-dev libswscale5 libsymspg-dev libsymspg1 libsz2 libtcl8.6 libthai-data libthai0 libtheora-dev libtheora0 libtiff-dev libtiff5 libtiffxx5 libtk8.6 libtool libtwolame0 libuchardet0 liburiparser-dev liburiparser1 libuv1 libva-drm2 libva-x11-2 libva2 libvdpau1 libvorbis0a libvorbisenc2 libvorbisfile3 libvoro++1 libvpx6 libvtk6-dev libvtk6-java libvtk6-jni libvtk6.3 libvtk6.3-qt libwacom-common libwacom2 libwavpack1 libwayland-client0 libwayland-server0 libwebp-dev libwebp6 libwebpdemux2 libwebpmux3 libwind0-heimdal libwoff1 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libx264-155 libx265-176 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev libxcb-render-util0 libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xfixes0-dev libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft-dev libxft2 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxml2-dev libxrender-dev libxrender1 libxshmfence-dev libxshmfence1 libxslt1.1 libxss-dev libxss1 libxt-dev libxt6 libxvidcore4 libxxf86vm-dev libxxf86vm1 libzstd-dev libzvbi-common libzvbi0 m4 man-db mesa-common-dev mime-support mpi-default-bin mpi-default-dev mysql-common ocl-icd-libopencl1 ocl-icd-opencl-dev odbcinst odbcinst1debian2 opencl-c-headers openmpi-bin openmpi-common openssh-client pkg-config po-debconf proj-data python python-asn1crypto python-attr python-autobahn python-automat python-cbor python-cffi-backend python-concurrent.futures python-configparser python-constantly python-cryptography python-enum34 python-future python-hyperlink python-idna python-incremental python-ipaddress python-lz4 python-minimal python-mpi4py python-nacl python-openssl python-pkg-resources python-pyasn1 python-pyasn1-modules python-pyqrcode python-service-identity python-six python-snappy python-trie python-trollius python-twisted python-twisted-bin python-twisted-core python-txaio python-u-msgpack python-ubjson python-vtk6 python-wsaccel python-zope.interface python2 python2-minimal python2.7 python2.7-minimal shared-mime-info tcl tcl-dev tcl-vtk6 tcl8.6 tcl8.6-dev tk tk-dev tk8.6 tk8.6-dev ucf unixodbc-dev uuid-dev voro++-dev vtk6 x11-common x11proto-core-dev x11proto-damage-dev x11proto-dev x11proto-fixes-dev x11proto-scrnsaver-dev x11proto-xext-dev x11proto-xf86vidmode-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build cython-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc gfortran-9-doc libgfortran5-dbg libcoarrays-dev groff isoquery lrzip libitpp-dev liblapack-doc libbluray-bdj libboost-doc libboost1.67-doc libboost-atomic1.67-dev libboost-chrono1.67-dev libboost-container1.67-dev libboost-context1.67-dev libboost-contract1.67-dev libboost-coroutine1.67-dev libboost-date-time1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev libboost-filesystem1.67-dev libboost-graph1.67-dev libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev libboost-program-options1.67-dev libboost-python1.67-dev libboost-random1.67-dev libboost-regex1.67-dev libboost-serialization1.67-dev libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-test1.67-dev libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev cups-common libcurl4-doc libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev libeigen3-doc libfftw3-doc freetype2-doc libgdal-doc libgeotiff-epsg geotiff-bin gdal-bin krb5-doc krb5-user libvisual-0.4-plugins gstreamer1.0-tools libhdf4-doc hdf4-tools libhdf5-doc libhwloc-contrib-plugins libice-doc icu-doc liblcms2-utils libtool-doc liblzma-doc netcdf-bin netcdf-doc libmyodbc odbc-postgresql tdsodbc unixodbc-bin ogdi-bin openmpi-doc opus-tools pciutils postgresql-doc-11 proj-bin qt5-image-formats-plugins qtwayland5 qt5-qmltooling-plugins librsvg2-bin lm-sensors libsm-doc speex sqlite3-doc libssl-doc libsuperlu-doc gcj-jdk vtk6-doc vtk6-examples java-virtual-machine libx11-doc libxcb-doc libxerces-c-doc libxext-doc libxt-doc m4-doc apparmor less www-browser opencl-icd libpoclu-dev keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl python-doc python-tk python-attr-doc python-cryptography-doc python-cryptography-vectors python-enum34-doc python-future-doc python-numpy python-nacl-doc python-openssl-doc python-openssl-dbg python-setuptools python-trie-doc python-twisted-bin-dbg python-gtk2 python-glade2 python-pampy python-qt3 python-serial python-wxgtk3.0 python-txaio-doc mayavi2 python2-doc python2.7-doc binfmt-support tcl-doc tcl-tclreadline tcl8.6-doc tk-doc tk8.6-doc Recommended packages: python-dev curl | wget | lynx libaacs0 libpam-cap dbus libarchive-cpio-perl proj-bin libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs gstreamer1.0-plugins-base javascript-common krb5-locales libcoarrays-openmpi-dev libpng-tools poppler-data publicsuffix qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme geoclue-2.0 librsvg2-common libsasl2-modules va-driver-all | va-driver vdpau-driver-all | vdpau-driver libwacom-bin xauth libmail-sendmail-perl python-click python-png xterm | x-terminal-emulator The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data cython debhelper default-libmysqlclient-dev dh-autoreconf dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core gdal-data gettext gettext-base gfortran gfortran-9 groff-base hdf5-helpers ibverbs-providers icu-devtools intltool-debian iso-codes libaec-dev libaec0 libaom0 libarchive-zip-perl libarchive13 libarmadillo-dev libarmadillo9 libarpack2 libarpack2-dev libasn1-8-heimdal libavahi-client3 libavahi-common-data libavahi-common3 libavcodec-dev libavcodec58 libavformat-dev libavformat58 libavutil-dev libavutil56 libblas-dev libblas3 libbluray2 libboost-dev libboost1.67-dev libbrotli1 libbsd0 libcairo2 libcap2-bin libcharls-dev libcharls2 libchromaprint1 libcodec2-0.8.1 libcroco3 libcups2 libcurl3-gnutls libcurl4 libcurl4-gnutls-dev libdap-dev libdap25 libdapclient6v5 libdapserver7v5 libdatrie1 libdbus-1-3 libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-dev libdrm-etnaviv1 libdrm-freedreno1 libdrm-nouveau2 libdrm-radeon1 libdrm-tegra0 libdrm2 libedit2 libegl-mesa0 libegl1 libeigen3-dev libelf1 libepsilon-dev libepsilon1 libevdev2 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-single3 libfile-stripnondeterminism-perl libfontconfig1 libfontconfig1-dev libfreetype6 libfreetype6-dev libfreexl-dev libfreexl1 libfribidi0 libfyba-dev libfyba0 libgbm1 libgdal-dev libgdal20 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgeos-3.7.2 libgeos-c1v5 libgeos-dev libgeotiff-dev libgeotiff2 libgfortran-9-dev libgfortran5 libgif-dev libgif7 libgl1 libgl1-mesa-dev libgl1-mesa-dri libgl2ps-dev libgl2ps1.4 libglapi-mesa libgles1 libgles2 libglib2.0-0 libglu1-mesa libglu1-mesa-dev libglvnd-core-dev libglvnd-dev libglvnd0 libglx-mesa0 libglx0 libgme0 libgraphite2-3 libgsm1 libgssapi-krb5-2 libgssapi3-heimdal libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgudev-1.0-0 libharfbuzz0b libhcrypto4-heimdal libhdf4-0-alt libhdf4-alt-dev libhdf5-103 libhdf5-cpp-103 libhdf5-dev libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev libheimbase1-heimdal libheimntlm0-heimdal libhwloc-dev libhwloc-plugins libhwloc5 libhx509-5-heimdal libhyphen0 libibverbs-dev libibverbs1 libice-dev libice6 libicu-dev libicu63 libinput-bin libinput10 libjbig-dev libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjs-sphinxdoc libjs-underscore libjson-c-dev libjsoncpp-dev libjsoncpp1 libk5crypto3 libkeyutils1 libkml-dev libkmlbase1 libkmlconvenience1 libkmldom1 libkmlengine1 libkmlregionator1 libkmlxsd1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libldap-2.4-2 libldap-common libllvm8 libltdl-dev libltdl7 liblzma-dev libmagic-mgc libmagic1 libminizip-dev libminizip1 libmp3lame0 libmpg123-0 libmtdev1 libmysqlclient-dev libmysqlclient21 libnetcdf-c++4 libnetcdf-cxx-legacy-dev libnetcdf-dev libnetcdf13 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnspr4 libnss3 libnuma-dev libnuma1 libodbc1 libogdi-dev libogdi4.1 libogg-dev libogg0 libopengl0 libopenjp2-7 libopenjp2-7-dev libopenmpi-dev libopenmpi3 libopenmpt0 libopus0 liborc-0.4-0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcre16-3 libpcre2-16-0 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpmix2 libpng-dev libpoppler-dev libpoppler-private-dev libpoppler90 libpq-dev libpq5 libproj-dev libproj13 libpsl5 libpthread-stubs0-dev libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libqhull-dev libqhull-r7 libqhull7 libqt5core5a libqt5dbus5 libqt5gui5 libqt5network5 libqt5opengl5 libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 libqt5sensors5 libqt5webchannel5 libqt5webkit5 libqt5widgets5 librhash0 libroken18-heimdal librsvg2-2 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libshine3 libsigsegv2 libsm-dev libsm6 libsnappy1v5 libsodium23 libsoxr0 libspatialite-dev libspatialite7 libspeex1 libsqlite3-dev libssh-4 libssh-gcrypt-4 libssl-dev libsub-override-perl libsuperlu-dev libsuperlu5 libswresample-dev libswresample3 libswscale-dev libswscale5 libsymspg-dev libsymspg1 libsz2 libtcl8.6 libthai-data libthai0 libtheora-dev libtheora0 libtiff-dev libtiff5 libtiffxx5 libtk8.6 libtool libtwolame0 libuchardet0 liburiparser-dev liburiparser1 libuv1 libva-drm2 libva-x11-2 libva2 libvdpau1 libvorbis0a libvorbisenc2 libvorbisfile3 libvoro++1 libvpx6 libvtk6-dev libvtk6-java libvtk6-jni libvtk6.3 libvtk6.3-qt libwacom-common libwacom2 libwavpack1 libwayland-client0 libwayland-server0 libwebp-dev libwebp6 libwebpdemux2 libwebpmux3 libwind0-heimdal libwoff1 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libx264-155 libx265-176 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev libxcb-render-util0 libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xfixes0-dev libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft-dev libxft2 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxml2-dev libxrender-dev libxrender1 libxshmfence-dev libxshmfence1 libxslt1.1 libxss-dev libxss1 libxt-dev libxt6 libxvidcore4 libxxf86vm-dev libxxf86vm1 libzstd-dev libzvbi-common libzvbi0 m4 man-db mesa-common-dev mime-support mpi-default-bin mpi-default-dev mysql-common ocl-icd-libopencl1 ocl-icd-opencl-dev odbcinst odbcinst1debian2 opencl-c-headers openmpi-bin openmpi-common openssh-client pkg-config po-debconf proj-data python python-asn1crypto python-attr python-autobahn python-automat python-cbor python-cffi-backend python-concurrent.futures python-configparser python-constantly python-cryptography python-enum34 python-future python-hyperlink python-idna python-incremental python-ipaddress python-lz4 python-minimal python-mpi4py python-nacl python-openssl python-pkg-resources python-pyasn1 python-pyasn1-modules python-pyqrcode python-service-identity python-six python-snappy python-trie python-trollius python-twisted python-twisted-bin python-twisted-core python-txaio python-u-msgpack python-ubjson python-vtk6 python-wsaccel python-zope.interface python2 python2-minimal python2.7 python2.7-minimal sbuild-build-depends-lammps-dummy shared-mime-info tcl tcl-dev tcl-vtk6 tcl8.6 tcl8.6-dev tk tk-dev tk8.6 tk8.6-dev ucf unixodbc-dev uuid-dev voro++-dev vtk6 x11-common x11proto-core-dev x11proto-damage-dev x11proto-dev x11proto-fixes-dev x11proto-scrnsaver-dev x11proto-xext-dev x11proto-xf86vidmode-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 518 newly installed, 0 to remove and 0 not upgraded. Need to get 268 MB of archives. After this operation, 1661 MB of additional disk space will be used. Get:1 copy:/<>/resolver-qOZplO/apt_archive ./ sbuild-build-depends-lammps-dummy 0.invalid.0 [964 B] Get:2 http://ftpmaster.internal/ubuntu eoan/main arm64 libbsd0 arm64 0.10.0-1 [43.7 kB] Get:3 http://ftpmaster.internal/ubuntu eoan/main arm64 bsdmainutils arm64 11.1.2ubuntu2 [175 kB] Get:4 http://ftpmaster.internal/ubuntu eoan/main arm64 libuchardet0 arm64 0.0.6-3 [65.0 kB] Get:5 http://ftpmaster.internal/ubuntu eoan/main arm64 groff-base arm64 1.22.4-3 [813 kB] Get:6 http://ftpmaster.internal/ubuntu eoan/main arm64 libpipeline1 arm64 1.5.1-2 [24.4 kB] Get:7 http://ftpmaster.internal/ubuntu eoan/main arm64 man-db arm64 2.8.7-3 [1096 kB] Get:8 http://ftpmaster.internal/ubuntu eoan/main arm64 libglib2.0-0 arm64 2.62.0-1 [1178 kB] Get:9 http://ftpmaster.internal/ubuntu eoan/main arm64 libcap2-bin arm64 1:2.25-2 [21.6 kB] Get:10 http://ftpmaster.internal/ubuntu eoan/main arm64 libgstreamer1.0-0 arm64 1.16.0-3 [789 kB] Get:11 http://ftpmaster.internal/ubuntu eoan/main arm64 liborc-0.4-0 arm64 1:0.4.30-1 [169 kB] Get:12 http://ftpmaster.internal/ubuntu eoan/main arm64 iso-codes all 4.3-1 [2688 kB] Get:13 http://ftpmaster.internal/ubuntu eoan/main arm64 libgstreamer-plugins-base1.0-0 arm64 1.16.0-4 [650 kB] Get:14 http://ftpmaster.internal/ubuntu eoan/main arm64 libhyphen0 arm64 2.8.8-7 [26.1 kB] Get:15 http://ftpmaster.internal/ubuntu eoan/main arm64 libicu63 arm64 63.2-2 [8146 kB] Get:16 http://ftpmaster.internal/ubuntu eoan/main arm64 libjpeg-turbo8 arm64 2.0.3-0ubuntu1 [101 kB] Get:17 http://ftpmaster.internal/ubuntu eoan/main arm64 libjpeg8 arm64 8c-2ubuntu8 [2198 B] Get:18 http://ftpmaster.internal/ubuntu eoan/universe arm64 libdouble-conversion3 arm64 3.1.5-2 [34.4 kB] Get:19 http://ftpmaster.internal/ubuntu eoan/main arm64 libpcre2-16-0 arm64 10.32-5 [144 kB] Get:20 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqt5core5a arm64 5.12.4+dfsg-4build1 [1835 kB] Get:21 http://ftpmaster.internal/ubuntu eoan/main arm64 libexpat1 arm64 2.2.7-2 [61.2 kB] Get:22 http://ftpmaster.internal/ubuntu eoan/main arm64 libfreetype6 arm64 2.9.1-4 [310 kB] Get:23 http://ftpmaster.internal/ubuntu eoan/main arm64 ucf all 3.0038+nmu1 [51.6 kB] Get:24 http://ftpmaster.internal/ubuntu eoan/main arm64 fonts-dejavu-core all 2.37-1 [1041 kB] Get:25 http://ftpmaster.internal/ubuntu eoan/main arm64 fontconfig-config all 2.13.1-2ubuntu2 [28.9 kB] Get:26 http://ftpmaster.internal/ubuntu eoan/main arm64 libfontconfig1 arm64 2.13.1-2ubuntu2 [111 kB] Get:27 http://ftpmaster.internal/ubuntu eoan/main arm64 fontconfig arm64 2.13.1-2ubuntu2 [171 kB] Get:28 http://ftpmaster.internal/ubuntu eoan/main arm64 libdrm-common all 2.4.99-1 [5216 B] Get:29 http://ftpmaster.internal/ubuntu eoan/main arm64 libdrm2 arm64 2.4.99-1 [31.5 kB] Get:30 http://ftpmaster.internal/ubuntu eoan/main arm64 libglvnd0 arm64 1.1.1-0ubuntu1 [41.5 kB] Get:31 http://ftpmaster.internal/ubuntu eoan/main arm64 libwayland-server0 arm64 1.17.0-1 [29.2 kB] Get:32 http://ftpmaster.internal/ubuntu eoan/main arm64 libgbm1 arm64 19.1.6-1ubuntu1 [26.3 kB] Get:33 http://ftpmaster.internal/ubuntu eoan/main arm64 libglapi-mesa arm64 19.1.6-1ubuntu1 [33.5 kB] Get:34 http://ftpmaster.internal/ubuntu eoan/main arm64 libwayland-client0 arm64 1.17.0-1 [23.0 kB] Get:35 http://ftpmaster.internal/ubuntu eoan/main arm64 libx11-xcb1 arm64 2:1.6.7-1 [9248 B] Get:36 http://ftpmaster.internal/ubuntu eoan/main arm64 libxau6 arm64 1:1.0.9-0ubuntu1 [7356 B] Get:37 http://ftpmaster.internal/ubuntu eoan/main arm64 libxdmcp6 arm64 1:1.1.3-0ubuntu1 [10.3 kB] Get:38 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb1 arm64 1.13.1-2 [43.6 kB] Get:39 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-dri2-0 arm64 1.13.1-2 [6892 B] Get:40 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-dri3-0 arm64 1.13.1-2 [6568 B] Get:41 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-present0 arm64 1.13.1-2 [5516 B] Get:42 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-sync1 arm64 1.13.1-2 [8816 B] Get:43 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-xfixes0 arm64 1.13.1-2 [9216 B] Get:44 http://ftpmaster.internal/ubuntu eoan/main arm64 libxshmfence1 arm64 1.3-1 [4868 B] Get:45 http://ftpmaster.internal/ubuntu eoan/main arm64 libegl-mesa0 arm64 19.1.6-1ubuntu1 [86.5 kB] Get:46 http://ftpmaster.internal/ubuntu eoan/main arm64 libegl1 arm64 1.1.1-0ubuntu1 [31.0 kB] Get:47 http://ftpmaster.internal/ubuntu eoan/main arm64 libx11-data all 2:1.6.7-1 [113 kB] Get:48 http://ftpmaster.internal/ubuntu eoan/main arm64 libx11-6 arm64 2:1.6.7-1 [552 kB] Get:49 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-glx0 arm64 1.13.1-2 [21.9 kB] Get:50 http://ftpmaster.internal/ubuntu eoan/main arm64 libxdamage1 arm64 1:1.1.5-1 [6896 B] Get:51 http://ftpmaster.internal/ubuntu eoan/main arm64 libxext6 arm64 2:1.3.4-0ubuntu1 [27.7 kB] Get:52 http://ftpmaster.internal/ubuntu eoan/main arm64 libxfixes3 arm64 1:5.0.3-1 [9844 B] Get:53 http://ftpmaster.internal/ubuntu eoan/main arm64 libxxf86vm1 arm64 1:1.1.4-1build1 [9908 B] Get:54 http://ftpmaster.internal/ubuntu eoan/main arm64 libdrm-amdgpu1 arm64 2.4.99-1 [17.8 kB] Get:55 http://ftpmaster.internal/ubuntu eoan/main arm64 libdrm-etnaviv1 arm64 2.4.99-1 [11.3 kB] Get:56 http://ftpmaster.internal/ubuntu eoan/main arm64 libdrm-nouveau2 arm64 2.4.99-1 [15.6 kB] Get:57 http://ftpmaster.internal/ubuntu eoan/main arm64 libdrm-radeon1 arm64 2.4.99-1 [18.7 kB] Get:58 http://ftpmaster.internal/ubuntu eoan/main arm64 libelf1 arm64 0.176-1.1 [43.6 kB] Get:59 http://ftpmaster.internal/ubuntu eoan/main arm64 libedit2 arm64 3.1-20190324-1 [82.7 kB] Get:60 http://ftpmaster.internal/ubuntu eoan/main arm64 libllvm8 arm64 1:8.0.1-3build1 [11.2 MB] Get:61 http://ftpmaster.internal/ubuntu eoan/main arm64 libsensors-config all 1:3.5.0-3ubuntu1 [6168 B] Get:62 http://ftpmaster.internal/ubuntu eoan/main arm64 libsensors5 arm64 1:3.5.0-3ubuntu1 [26.3 kB] Get:63 http://ftpmaster.internal/ubuntu eoan/main arm64 libgl1-mesa-dri arm64 19.1.6-1ubuntu1 [5510 kB] Get:64 http://ftpmaster.internal/ubuntu eoan/main arm64 libglx-mesa0 arm64 19.1.6-1ubuntu1 [139 kB] Get:65 http://ftpmaster.internal/ubuntu eoan/main arm64 libglx0 arm64 1.1.1-0ubuntu1 [27.3 kB] Get:66 http://ftpmaster.internal/ubuntu eoan/main arm64 libgl1 arm64 1.1.1-0ubuntu1 [91.0 kB] Get:67 http://ftpmaster.internal/ubuntu eoan/main arm64 libgraphite2-3 arm64 1.3.13-8 [67.7 kB] Get:68 http://ftpmaster.internal/ubuntu eoan/main arm64 libharfbuzz0b arm64 2.6.1-3 [342 kB] Get:69 http://ftpmaster.internal/ubuntu eoan/main arm64 x11-common all 1:7.7+19ubuntu12 [22.4 kB] Get:70 http://ftpmaster.internal/ubuntu eoan/main arm64 libice6 arm64 2:1.0.10-0ubuntu1 [37.7 kB] Get:71 http://ftpmaster.internal/ubuntu eoan/main arm64 libevdev2 arm64 1.8.0+dfsg-2 [29.5 kB] Get:72 http://ftpmaster.internal/ubuntu eoan/main arm64 libmtdev1 arm64 1.1.5-1ubuntu3 [12.9 kB] Get:73 http://ftpmaster.internal/ubuntu eoan/main arm64 libgudev-1.0-0 arm64 1:233-0ubuntu1 [13.1 kB] Get:74 http://ftpmaster.internal/ubuntu eoan/main arm64 libwacom-common all 0.32-1 [38.5 kB] Get:75 http://ftpmaster.internal/ubuntu eoan/main arm64 libwacom2 arm64 0.32-1 [16.9 kB] Get:76 http://ftpmaster.internal/ubuntu eoan/main arm64 libinput-bin arm64 1.14.1-1 [14.2 kB] Get:77 http://ftpmaster.internal/ubuntu eoan/main arm64 libinput10 arm64 1.14.1-1 [99.0 kB] Get:78 http://ftpmaster.internal/ubuntu eoan/main arm64 libdbus-1-3 arm64 1.12.14-1ubuntu2 [170 kB] Get:79 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqt5dbus5 arm64 5.12.4+dfsg-4build1 [195 kB] Get:80 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqt5network5 arm64 5.12.4+dfsg-4build1 [628 kB] Get:81 http://ftpmaster.internal/ubuntu eoan/main arm64 libsm6 arm64 2:1.2.3-1 [15.1 kB] Get:82 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-icccm4 arm64 0.4.1-1.1 [10.3 kB] Get:83 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-shm0 arm64 1.13.1-2 [5628 B] Get:84 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-util1 arm64 0.4.0-0ubuntu3 [10.5 kB] Get:85 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-image0 arm64 0.4.0-1build1 [11.1 kB] Get:86 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-keysyms1 arm64 0.4.0-1build1 [8344 B] Get:87 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-randr0 arm64 1.13.1-2 [16.2 kB] Get:88 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-render0 arm64 1.13.1-2 [14.5 kB] Get:89 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-render-util0 arm64 0.3.9-1build1 [9756 B] Get:90 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-shape0 arm64 1.13.1-2 [5928 B] Get:91 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-xinerama0 arm64 1.13.1-2 [5324 B] Get:92 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-xinput0 arm64 1.13.1-2 [28.8 kB] Get:93 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-xkb1 arm64 1.13.1-2 [28.2 kB] Get:94 http://ftpmaster.internal/ubuntu eoan/main arm64 xkb-data all 2.26-2ubuntu1 [333 kB] Get:95 http://ftpmaster.internal/ubuntu eoan/main arm64 libxkbcommon0 arm64 0.8.4-1 [92.3 kB] Get:96 http://ftpmaster.internal/ubuntu eoan/main arm64 libxkbcommon-x11-0 arm64 0.8.4-1 [12.9 kB] Get:97 http://ftpmaster.internal/ubuntu eoan/main arm64 libxrender1 arm64 1:0.9.10-1 [16.1 kB] Get:98 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqt5gui5 arm64 5.12.4+dfsg-4build1 [2651 kB] Get:99 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqt5positioning5 arm64 5.12.4+dfsg-1 [178 kB] Get:100 http://ftpmaster.internal/ubuntu eoan/main arm64 libavahi-common-data arm64 0.7-4ubuntu5 [21.4 kB] Get:101 http://ftpmaster.internal/ubuntu eoan/main arm64 libavahi-common3 arm64 0.7-4ubuntu5 [20.5 kB] Get:102 http://ftpmaster.internal/ubuntu eoan/main arm64 libavahi-client3 arm64 0.7-4ubuntu5 [24.1 kB] Get:103 http://ftpmaster.internal/ubuntu eoan/main arm64 libkrb5support0 arm64 1.17-6 [30.8 kB] Get:104 http://ftpmaster.internal/ubuntu eoan/main arm64 libk5crypto3 arm64 1.17-6 [80.5 kB] Get:105 http://ftpmaster.internal/ubuntu eoan/main arm64 libkeyutils1 arm64 1.6-6 [9960 B] Get:106 http://ftpmaster.internal/ubuntu eoan/main arm64 libkrb5-3 arm64 1.17-6 [312 kB] Get:107 http://ftpmaster.internal/ubuntu eoan/main arm64 libgssapi-krb5-2 arm64 1.17-6 [113 kB] Get:108 http://ftpmaster.internal/ubuntu eoan/main arm64 libcups2 arm64 2.2.12-2ubuntu1 [199 kB] Get:109 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqt5widgets5 arm64 5.12.4+dfsg-4build1 [2148 kB] Get:110 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqt5printsupport5 arm64 5.12.4+dfsg-4build1 [185 kB] Get:111 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqt5qml5 arm64 5.12.4-1 [1307 kB] Get:112 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqt5quick5 arm64 5.12.4-1 [1214 kB] Get:113 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqt5sensors5 arm64 5.12.4-1 [107 kB] Get:114 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqt5webchannel5 arm64 5.12.4-1 [47.0 kB] Get:115 http://ftpmaster.internal/ubuntu eoan/main arm64 libwebp6 arm64 0.6.1-2 [155 kB] Get:116 http://ftpmaster.internal/ubuntu eoan/main arm64 libbrotli1 arm64 1.0.7-2 [261 kB] Get:117 http://ftpmaster.internal/ubuntu eoan/main arm64 libwoff1 arm64 1.0.2-1build1 [39.2 kB] Get:118 http://ftpmaster.internal/ubuntu eoan/main arm64 libxml2 arm64 2.9.4+dfsg1-7ubuntu3 [562 kB] Get:119 http://ftpmaster.internal/ubuntu eoan/main arm64 libxslt1.1 arm64 1.1.33-0ubuntu1 [139 kB] Get:120 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqt5webkit5 arm64 5.212.0~alpha3-3 [10.3 MB] Get:121 http://ftpmaster.internal/ubuntu eoan/universe arm64 libpython2.7-minimal arm64 2.7.16-4 [335 kB] Get:122 http://ftpmaster.internal/ubuntu eoan/universe arm64 python2.7-minimal arm64 2.7.16-4 [1233 kB] Get:123 http://ftpmaster.internal/ubuntu eoan/universe arm64 python2-minimal arm64 2.7.16-1 [27.8 kB] Get:124 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-minimal arm64 2.7.16-1 [5996 B] Get:125 http://ftpmaster.internal/ubuntu eoan/main arm64 mime-support all 3.63ubuntu1 [30.8 kB] Get:126 http://ftpmaster.internal/ubuntu eoan/universe arm64 libpython2.7-stdlib arm64 2.7.16-4 [1866 kB] Get:127 http://ftpmaster.internal/ubuntu eoan/universe arm64 python2.7 arm64 2.7.16-4 [244 kB] Get:128 http://ftpmaster.internal/ubuntu eoan/universe arm64 libpython2-stdlib arm64 2.7.16-1 [7432 B] Get:129 http://ftpmaster.internal/ubuntu eoan/universe arm64 libpython-stdlib arm64 2.7.16-1 [5828 B] Get:130 http://ftpmaster.internal/ubuntu eoan/universe arm64 python2 arm64 2.7.16-1 [26.5 kB] Get:131 http://ftpmaster.internal/ubuntu eoan/universe arm64 python arm64 2.7.16-1 [7836 B] Get:132 http://ftpmaster.internal/ubuntu eoan/main arm64 libmagic-mgc arm64 1:5.37-5 [209 kB] Get:133 http://ftpmaster.internal/ubuntu eoan/main arm64 libmagic1 arm64 1:5.37-5 [70.9 kB] Get:134 http://ftpmaster.internal/ubuntu eoan/main arm64 file arm64 1:5.37-5 [23.2 kB] Get:135 http://ftpmaster.internal/ubuntu eoan/main arm64 libfribidi0 arm64 1.0.5-3.1 [26.3 kB] Get:136 http://ftpmaster.internal/ubuntu eoan/main arm64 libsodium23 arm64 1.0.18-1 [108 kB] Get:137 http://ftpmaster.internal/ubuntu eoan/main arm64 shared-mime-info arm64 1.10-1 [427 kB] Get:138 http://ftpmaster.internal/ubuntu eoan/main arm64 gettext-base arm64 0.19.8.1-9 [48.0 kB] Get:139 http://ftpmaster.internal/ubuntu eoan/main arm64 libnuma1 arm64 2.0.12-1 [20.5 kB] Get:140 http://ftpmaster.internal/ubuntu eoan/main arm64 libpsl5 arm64 0.20.2-2 [49.9 kB] Get:141 http://ftpmaster.internal/ubuntu eoan/main arm64 openssh-client arm64 1:8.0p1-6build1 [582 kB] Get:142 http://ftpmaster.internal/ubuntu eoan/main arm64 libsigsegv2 arm64 2.12-2 [13.3 kB] Get:143 http://ftpmaster.internal/ubuntu eoan/main arm64 m4 arm64 1.4.18-2 [194 kB] Get:144 http://ftpmaster.internal/ubuntu eoan/main arm64 autoconf all 2.69-11 [322 kB] Get:145 http://ftpmaster.internal/ubuntu eoan/main arm64 autotools-dev all 20180224.1 [39.6 kB] Get:146 http://ftpmaster.internal/ubuntu eoan/main arm64 automake all 1:1.16.1-4ubuntu3 [522 kB] Get:147 http://ftpmaster.internal/ubuntu eoan/main arm64 autopoint all 0.19.8.1-9 [412 kB] Get:148 http://ftpmaster.internal/ubuntu eoan/main arm64 cmake-data all 3.13.4-1build1 [1458 kB] Get:149 http://ftpmaster.internal/ubuntu eoan/main arm64 libarchive13 arm64 3.3.3-4 [283 kB] Get:150 http://ftpmaster.internal/ubuntu eoan/main arm64 libroken18-heimdal arm64 7.5.0+dfsg-3build1 [39.4 kB] Get:151 http://ftpmaster.internal/ubuntu eoan/main arm64 libasn1-8-heimdal arm64 7.5.0+dfsg-3build1 [150 kB] Get:152 http://ftpmaster.internal/ubuntu eoan/main arm64 libheimbase1-heimdal arm64 7.5.0+dfsg-3build1 [27.9 kB] Get:153 http://ftpmaster.internal/ubuntu eoan/main arm64 libhcrypto4-heimdal arm64 7.5.0+dfsg-3build1 [85.9 kB] Get:154 http://ftpmaster.internal/ubuntu eoan/main arm64 libwind0-heimdal arm64 7.5.0+dfsg-3build1 [47.2 kB] Get:155 http://ftpmaster.internal/ubuntu eoan/main arm64 libhx509-5-heimdal arm64 7.5.0+dfsg-3build1 [98.7 kB] Get:156 http://ftpmaster.internal/ubuntu eoan/main arm64 libkrb5-26-heimdal arm64 7.5.0+dfsg-3build1 [191 kB] Get:157 http://ftpmaster.internal/ubuntu eoan/main arm64 libheimntlm0-heimdal arm64 7.5.0+dfsg-3build1 [14.7 kB] Get:158 http://ftpmaster.internal/ubuntu eoan/main arm64 libgssapi3-heimdal arm64 7.5.0+dfsg-3build1 [88.0 kB] Get:159 http://ftpmaster.internal/ubuntu eoan/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-1build3 [14.8 kB] Get:160 http://ftpmaster.internal/ubuntu eoan/main arm64 libsasl2-2 arm64 2.1.27+dfsg-1build3 [48.5 kB] Get:161 http://ftpmaster.internal/ubuntu eoan/main arm64 libldap-common all 2.4.48+dfsg-1ubuntu1 [17.3 kB] Get:162 http://ftpmaster.internal/ubuntu eoan/main arm64 libldap-2.4-2 arm64 2.4.48+dfsg-1ubuntu1 [146 kB] Get:163 http://ftpmaster.internal/ubuntu eoan/main arm64 libnghttp2-14 arm64 1.39.2-1 [75.4 kB] Get:164 http://ftpmaster.internal/ubuntu eoan/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2 [49.8 kB] Get:165 http://ftpmaster.internal/ubuntu eoan/main arm64 libssh-4 arm64 0.9.0-1 [186 kB] Get:166 http://ftpmaster.internal/ubuntu eoan/main arm64 libcurl4 arm64 7.65.3-1ubuntu3 [211 kB] Get:167 http://ftpmaster.internal/ubuntu eoan/main arm64 libjsoncpp1 arm64 1.7.4-3 [69.2 kB] Get:168 http://ftpmaster.internal/ubuntu eoan/main arm64 librhash0 arm64 1.3.8-1 [111 kB] Get:169 http://ftpmaster.internal/ubuntu eoan/main arm64 libuv1 arm64 1.30.1-1 [67.1 kB] Get:170 http://ftpmaster.internal/ubuntu eoan/main arm64 cmake arm64 3.13.4-1build1 [3150 kB] Get:171 http://ftpmaster.internal/ubuntu eoan/universe arm64 cython arm64 0.29.10-0ubuntu1 [1207 kB] Get:172 http://ftpmaster.internal/ubuntu eoan/main arm64 libtool all 2.4.6-11 [194 kB] Get:173 http://ftpmaster.internal/ubuntu eoan/main arm64 dh-autoreconf all 19 [16.1 kB] Get:174 http://ftpmaster.internal/ubuntu eoan/main arm64 libarchive-zip-perl all 1.65-1 [83.6 kB] Get:175 http://ftpmaster.internal/ubuntu eoan/main arm64 libsub-override-perl all 0.09-2 [9532 B] Get:176 http://ftpmaster.internal/ubuntu eoan/main arm64 libfile-stripnondeterminism-perl all 1.6.0-1 [16.2 kB] Get:177 http://ftpmaster.internal/ubuntu eoan/main arm64 dh-strip-nondeterminism all 1.6.0-1 [5208 B] Get:178 http://ftpmaster.internal/ubuntu eoan/main arm64 dwz arm64 0.13-1 [73.4 kB] Get:179 http://ftpmaster.internal/ubuntu eoan/main arm64 libcroco3 arm64 0.6.13-1 [77.1 kB] Get:180 http://ftpmaster.internal/ubuntu eoan/main arm64 gettext arm64 0.19.8.1-9 [853 kB] Get:181 http://ftpmaster.internal/ubuntu eoan/main arm64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:182 http://ftpmaster.internal/ubuntu eoan/main arm64 po-debconf all 1.0.21 [233 kB] Get:183 http://ftpmaster.internal/ubuntu eoan/main arm64 debhelper all 12.4ubuntu1 [910 kB] Get:184 http://ftpmaster.internal/ubuntu eoan/main arm64 mysql-common all 5.8+1.0.5ubuntu2 [7496 B] Get:185 http://ftpmaster.internal/ubuntu eoan/main arm64 libmysqlclient21 arm64 8.0.16-0ubuntu3 [1051 kB] Get:186 http://ftpmaster.internal/ubuntu eoan/main arm64 libssl-dev arm64 1.1.1c-1ubuntu4 [1453 kB] Get:187 http://ftpmaster.internal/ubuntu eoan/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-1ubuntu3 [170 kB] Get:188 http://ftpmaster.internal/ubuntu eoan/main arm64 libmysqlclient-dev arm64 8.0.16-0ubuntu3 [1289 kB] Get:189 http://ftpmaster.internal/ubuntu eoan/main arm64 default-libmysqlclient-dev arm64 1.0.5ubuntu2 [3932 B] Get:190 http://ftpmaster.internal/ubuntu eoan/universe arm64 gdal-data all 2.4.2+dfsg-1build2 [514 kB] Get:191 http://ftpmaster.internal/ubuntu eoan/main arm64 libgfortran5 arm64 9.2.1-8ubuntu1 [333 kB] Get:192 http://ftpmaster.internal/ubuntu eoan/main arm64 libgfortran-9-dev arm64 9.2.1-8ubuntu1 [390 kB] Get:193 http://ftpmaster.internal/ubuntu eoan/main arm64 gfortran-9 arm64 9.2.1-8ubuntu1 [8944 kB] Get:194 http://ftpmaster.internal/ubuntu eoan/main arm64 gfortran arm64 4:9.2.1-3.1ubuntu1 [1364 B] Get:195 http://ftpmaster.internal/ubuntu eoan/universe arm64 hdf5-helpers arm64 1.10.4+repack-10 [13.9 kB] Get:196 http://ftpmaster.internal/ubuntu eoan/main arm64 libnl-3-200 arm64 3.4.0-1 [51.5 kB] Get:197 http://ftpmaster.internal/ubuntu eoan/main arm64 libnl-route-3-200 arm64 3.4.0-1 [138 kB] Get:198 http://ftpmaster.internal/ubuntu eoan/main arm64 libibverbs1 arm64 24.0-2 [47.8 kB] Get:199 http://ftpmaster.internal/ubuntu eoan/main arm64 ibverbs-providers arm64 24.0-2 [217 kB] Get:200 http://ftpmaster.internal/ubuntu eoan/main arm64 icu-devtools arm64 63.2-2 [170 kB] Get:201 http://ftpmaster.internal/ubuntu eoan/universe arm64 libaec0 arm64 1.0.4-1 [18.7 kB] Get:202 http://ftpmaster.internal/ubuntu eoan/universe arm64 libaom0 arm64 1.0.0-3 [837 kB] Get:203 http://ftpmaster.internal/ubuntu eoan/main arm64 libblas3 arm64 3.8.0-2 [89.8 kB] Get:204 http://ftpmaster.internal/ubuntu eoan/main arm64 liblapack3 arm64 3.8.0-2 [1478 kB] Get:205 http://ftpmaster.internal/ubuntu eoan/universe arm64 libarpack2 arm64 3.7.0-2 [71.6 kB] Get:206 http://ftpmaster.internal/ubuntu eoan/universe arm64 libsuperlu5 arm64 5.2.1+dfsg1-4 [125 kB] Get:207 http://ftpmaster.internal/ubuntu eoan/universe arm64 libarmadillo9 arm64 1:9.600.5+dfsg-1 [89.8 kB] Get:208 http://ftpmaster.internal/ubuntu eoan/main arm64 libblas-dev arm64 3.8.0-2 [92.2 kB] Get:209 http://ftpmaster.internal/ubuntu eoan/main arm64 liblapack-dev arm64 3.8.0-2 [1512 kB] Get:210 http://ftpmaster.internal/ubuntu eoan/universe arm64 libarpack2-dev arm64 3.7.0-2 [82.6 kB] Get:211 http://ftpmaster.internal/ubuntu eoan/universe arm64 libsz2 arm64 1.0.4-1 [5100 B] Get:212 http://ftpmaster.internal/ubuntu eoan/universe arm64 libhdf5-103 arm64 1.10.4+repack-10 [1145 kB] Get:213 http://ftpmaster.internal/ubuntu eoan/main arm64 libjpeg-turbo8-dev arm64 2.0.3-0ubuntu1 [215 kB] Get:214 http://ftpmaster.internal/ubuntu eoan/main arm64 libjpeg8-dev arm64 8c-2ubuntu8 [1550 B] Get:215 http://ftpmaster.internal/ubuntu eoan/main arm64 libjpeg-dev arm64 8c-2ubuntu8 [1546 B] Get:216 http://ftpmaster.internal/ubuntu eoan/universe arm64 libaec-dev arm64 1.0.4-1 [16.5 kB] Get:217 http://ftpmaster.internal/ubuntu eoan/universe arm64 libhdf5-cpp-103 arm64 1.10.4+repack-10 [108 kB] Get:218 http://ftpmaster.internal/ubuntu eoan/universe arm64 libhdf5-dev arm64 1.10.4+repack-10 [2658 kB] Get:219 http://ftpmaster.internal/ubuntu eoan/universe arm64 libsuperlu-dev arm64 5.2.1+dfsg1-4 [16.4 kB] Get:220 http://ftpmaster.internal/ubuntu eoan/universe arm64 libarmadillo-dev arm64 1:9.600.5+dfsg-1 [368 kB] Get:221 http://ftpmaster.internal/ubuntu eoan/universe arm64 libva2 arm64 2.5.0-1 [47.8 kB] Get:222 http://ftpmaster.internal/ubuntu eoan/universe arm64 libva-drm2 arm64 2.5.0-1 [6688 B] Get:223 http://ftpmaster.internal/ubuntu eoan/universe arm64 libva-x11-2 arm64 2.5.0-1 [10.9 kB] Get:224 http://ftpmaster.internal/ubuntu eoan/main arm64 libvdpau1 arm64 1.2-1ubuntu1 [23.3 kB] Get:225 http://ftpmaster.internal/ubuntu eoan/universe arm64 libavutil56 arm64 7:4.1.4-1build2 [188 kB] Get:226 http://ftpmaster.internal/ubuntu eoan/main arm64 libpixman-1-0 arm64 0.38.4-0ubuntu1 [130 kB] Get:227 http://ftpmaster.internal/ubuntu eoan/main arm64 libcairo2 arm64 1.16.0-4 [539 kB] Get:228 http://ftpmaster.internal/ubuntu eoan/universe arm64 libcodec2-0.8.1 arm64 0.8.1-2 [221 kB] Get:229 http://ftpmaster.internal/ubuntu eoan/universe arm64 libgsm1 arm64 1.0.18-2 [24.4 kB] Get:230 http://ftpmaster.internal/ubuntu eoan/main arm64 libmp3lame0 arm64 3.100-2build1 [119 kB] Get:231 http://ftpmaster.internal/ubuntu eoan/universe arm64 libopenjp2-7 arm64 2.3.0-2 [132 kB] Get:232 http://ftpmaster.internal/ubuntu eoan/main arm64 libopus0 arm64 1.3.1-0ubuntu1 [172 kB] Get:233 http://ftpmaster.internal/ubuntu eoan/main arm64 libjbig0 arm64 2.1-3.1build1 [24.0 kB] Get:234 http://ftpmaster.internal/ubuntu eoan/main arm64 libtiff5 arm64 4.0.10+git190818-1 [150 kB] Get:235 http://ftpmaster.internal/ubuntu eoan/main arm64 libgdk-pixbuf2.0-common all 2.39.2-3 [4868 B] Get:236 http://ftpmaster.internal/ubuntu eoan/main arm64 libgdk-pixbuf2.0-0 arm64 2.39.2-3 [156 kB] Get:237 http://ftpmaster.internal/ubuntu eoan/main arm64 libthai-data all 0.1.28-3 [134 kB] Get:238 http://ftpmaster.internal/ubuntu eoan/main arm64 libdatrie1 arm64 0.2.12-3 [17.9 kB] Get:239 http://ftpmaster.internal/ubuntu eoan/main arm64 libthai0 arm64 0.1.28-3 [16.8 kB] Get:240 http://ftpmaster.internal/ubuntu eoan/main arm64 libpango-1.0-0 arm64 1.42.4-7 [147 kB] Get:241 http://ftpmaster.internal/ubuntu eoan/main arm64 libpangoft2-1.0-0 arm64 1.42.4-7 [33.1 kB] Get:242 http://ftpmaster.internal/ubuntu eoan/main arm64 libpangocairo-1.0-0 arm64 1.42.4-7 [21.3 kB] Get:243 http://ftpmaster.internal/ubuntu eoan/main arm64 librsvg2-2 arm64 2.44.14-1 [1006 kB] Get:244 http://ftpmaster.internal/ubuntu eoan/universe arm64 libshine3 arm64 3.1.1-2 [22.5 kB] Get:245 http://ftpmaster.internal/ubuntu eoan/main arm64 libsnappy1v5 arm64 1.1.7-1 [15.8 kB] Get:246 http://ftpmaster.internal/ubuntu eoan/main arm64 libspeex1 arm64 1.2~rc1.2-1ubuntu2 [42.8 kB] Get:247 http://ftpmaster.internal/ubuntu eoan/main arm64 libsoxr0 arm64 0.1.3-1 [54.1 kB] Get:248 http://ftpmaster.internal/ubuntu eoan/universe arm64 libswresample3 arm64 7:4.1.4-1build2 [49.7 kB] Get:249 http://ftpmaster.internal/ubuntu eoan/main arm64 libogg0 arm64 1.3.4-0ubuntu1 [22.9 kB] Get:250 http://ftpmaster.internal/ubuntu eoan/main arm64 libtheora0 arm64 1.1.1+dfsg.1-15 [154 kB] Get:251 http://ftpmaster.internal/ubuntu eoan/main arm64 libtwolame0 arm64 0.3.13-4 [41.1 kB] Get:252 http://ftpmaster.internal/ubuntu eoan/main arm64 libvorbis0a arm64 1.3.6-2 [79.2 kB] Get:253 http://ftpmaster.internal/ubuntu eoan/main arm64 libvorbisenc2 arm64 1.3.6-2 [70.6 kB] Get:254 http://ftpmaster.internal/ubuntu eoan/main arm64 libvpx6 arm64 1.8.1-2 [747 kB] Get:255 http://ftpmaster.internal/ubuntu eoan/main arm64 libwavpack1 arm64 5.1.0-7 [67.9 kB] Get:256 http://ftpmaster.internal/ubuntu eoan/main arm64 libwebpmux3 arm64 0.6.1-2 [17.3 kB] Get:257 http://ftpmaster.internal/ubuntu eoan/universe arm64 libx264-155 arm64 2:0.155.2917+git0a84d98-2 [427 kB] Get:258 http://ftpmaster.internal/ubuntu eoan/universe arm64 libx265-176 arm64 3.1.1-2 [549 kB] Get:259 http://ftpmaster.internal/ubuntu eoan/universe arm64 libxvidcore4 arm64 2:1.3.5-1 [153 kB] Get:260 http://ftpmaster.internal/ubuntu eoan/universe arm64 libzvbi-common all 0.2.35-16 [32.4 kB] Get:261 http://ftpmaster.internal/ubuntu eoan/universe arm64 libzvbi0 arm64 0.2.35-16 [222 kB] Get:262 http://ftpmaster.internal/ubuntu eoan/universe arm64 libavcodec58 arm64 7:4.1.4-1build2 [4442 kB] Get:263 http://ftpmaster.internal/ubuntu eoan/universe arm64 libavutil-dev arm64 7:4.1.4-1build2 [308 kB] Get:264 http://ftpmaster.internal/ubuntu eoan/universe arm64 libswresample-dev arm64 7:4.1.4-1build2 [60.1 kB] Get:265 http://ftpmaster.internal/ubuntu eoan/universe arm64 libavcodec-dev arm64 7:4.1.4-1build2 [4979 kB] Get:266 http://ftpmaster.internal/ubuntu eoan/universe arm64 libbluray2 arm64 1:1.1.2-2 [123 kB] Get:267 http://ftpmaster.internal/ubuntu eoan/universe arm64 libchromaprint1 arm64 1.4.3-3 [34.7 kB] Get:268 http://ftpmaster.internal/ubuntu eoan/universe arm64 libgme0 arm64 0.6.2-1 [115 kB] Get:269 http://ftpmaster.internal/ubuntu eoan/main arm64 libmpg123-0 arm64 1.25.12-1build1 [115 kB] Get:270 http://ftpmaster.internal/ubuntu eoan/main arm64 libvorbisfile3 arm64 1.3.6-2 [15.4 kB] Get:271 http://ftpmaster.internal/ubuntu eoan/universe arm64 libopenmpt0 arm64 0.4.6-1 [539 kB] Get:272 http://ftpmaster.internal/ubuntu eoan/main arm64 libssh-gcrypt-4 arm64 0.9.0-1 [188 kB] Get:273 http://ftpmaster.internal/ubuntu eoan/universe arm64 libavformat58 arm64 7:4.1.4-1build2 [907 kB] Get:274 http://ftpmaster.internal/ubuntu eoan/universe arm64 libavformat-dev arm64 7:4.1.4-1build2 [1139 kB] Get:275 http://ftpmaster.internal/ubuntu eoan/main arm64 libboost1.67-dev arm64 1.67.0-13ubuntu1 [8361 kB] Get:276 http://ftpmaster.internal/ubuntu eoan/main arm64 libboost-dev arm64 1.67.0.2 [3544 B] Get:277 http://ftpmaster.internal/ubuntu eoan/universe arm64 libcharls2 arm64 2.0.0+dfsg-1 [55.8 kB] Get:278 http://ftpmaster.internal/ubuntu eoan/universe arm64 libcharls-dev arm64 2.0.0+dfsg-1 [6544 B] Get:279 http://ftpmaster.internal/ubuntu eoan/main arm64 libcurl3-gnutls arm64 7.65.3-1ubuntu3 [209 kB] Get:280 http://ftpmaster.internal/ubuntu eoan/main arm64 libcurl4-gnutls-dev arm64 7.65.3-1ubuntu3 [304 kB] Get:281 http://ftpmaster.internal/ubuntu eoan/universe arm64 libdap25 arm64 3.20.4-1 [380 kB] Get:282 http://ftpmaster.internal/ubuntu eoan/universe arm64 libdapserver7v5 arm64 3.20.4-1 [20.2 kB] Get:283 http://ftpmaster.internal/ubuntu eoan/universe arm64 libdapclient6v5 arm64 3.20.4-1 [79.5 kB] Get:284 http://ftpmaster.internal/ubuntu eoan/main arm64 libicu-dev arm64 63.2-2 [9055 kB] Get:285 http://ftpmaster.internal/ubuntu eoan/main arm64 libxml2-dev arm64 2.9.4+dfsg1-7ubuntu3 [682 kB] Get:286 http://ftpmaster.internal/ubuntu eoan/main arm64 uuid-dev arm64 2.34-0.1ubuntu2 [34.0 kB] Get:287 http://ftpmaster.internal/ubuntu eoan/main arm64 pkg-config arm64 0.29.1-0ubuntu3 [43.7 kB] Get:288 http://ftpmaster.internal/ubuntu eoan/universe arm64 libdap-dev arm64 3.20.4-1 [699 kB] Get:289 http://ftpmaster.internal/ubuntu eoan/main arm64 libdrm-freedreno1 arm64 2.4.99-1 [17.9 kB] Get:290 http://ftpmaster.internal/ubuntu eoan/main arm64 libdrm-tegra0 arm64 2.4.99-1 [6192 B] Get:291 http://ftpmaster.internal/ubuntu eoan/main arm64 libdrm-dev arm64 2.4.99-1 [129 kB] Get:292 http://ftpmaster.internal/ubuntu eoan/universe arm64 libepsilon1 arm64 0.9.2+dfsg-4 [38.2 kB] Get:293 http://ftpmaster.internal/ubuntu eoan/main arm64 libevent-2.1-6 arm64 2.1.8-stable-4build1 [109 kB] Get:294 http://ftpmaster.internal/ubuntu eoan/main arm64 libevent-core-2.1-6 arm64 2.1.8-stable-4build1 [70.7 kB] Get:295 http://ftpmaster.internal/ubuntu eoan/main arm64 libevent-pthreads-2.1-6 arm64 2.1.8-stable-4build1 [5044 B] Get:296 http://ftpmaster.internal/ubuntu eoan/main arm64 libexpat1-dev arm64 2.2.7-2 [103 kB] Get:297 http://ftpmaster.internal/ubuntu eoan/main arm64 libfftw3-double3 arm64 3.3.8-2 [379 kB] Get:298 http://ftpmaster.internal/ubuntu eoan/main arm64 libfftw3-long3 arm64 3.3.8-2 [521 kB] Get:299 http://ftpmaster.internal/ubuntu eoan/main arm64 libfftw3-single3 arm64 3.3.8-2 [625 kB] Get:300 http://ftpmaster.internal/ubuntu eoan/main arm64 libfftw3-bin arm64 3.3.8-2 [28.5 kB] Get:301 http://ftpmaster.internal/ubuntu eoan/main arm64 libfftw3-dev arm64 3.3.8-2 [1436 kB] Get:302 http://ftpmaster.internal/ubuntu eoan/main arm64 libpng-dev arm64 1.6.37-1 [172 kB] Get:303 http://ftpmaster.internal/ubuntu eoan/main arm64 libfreetype6-dev arm64 2.9.1-4 [477 kB] Get:304 http://ftpmaster.internal/ubuntu eoan/main arm64 libfontconfig1-dev arm64 2.13.1-2ubuntu2 [730 kB] Get:305 http://ftpmaster.internal/ubuntu eoan/universe arm64 libfyba0 arm64 4.1.1-6 [105 kB] Get:306 http://ftpmaster.internal/ubuntu eoan/universe arm64 libfyba-dev arm64 4.1.1-6 [166 kB] Get:307 http://ftpmaster.internal/ubuntu eoan/universe arm64 libfreexl1 arm64 1.0.5-3 [32.8 kB] Get:308 http://ftpmaster.internal/ubuntu eoan/universe arm64 libgeos-3.7.2 arm64 3.7.2-1 [441 kB] Get:309 http://ftpmaster.internal/ubuntu eoan/universe arm64 libgeos-c1v5 arm64 3.7.2-1 [52.9 kB] Get:310 http://ftpmaster.internal/ubuntu eoan/universe arm64 proj-data all 5.2.0-1 [6952 kB] Get:311 http://ftpmaster.internal/ubuntu eoan/universe arm64 libproj13 arm64 5.2.0-1 [172 kB] Get:312 http://ftpmaster.internal/ubuntu eoan/universe arm64 libgeotiff2 arm64 1.4.3-1 [52.1 kB] Get:313 http://ftpmaster.internal/ubuntu eoan/main arm64 libgif7 arm64 5.1.4-3ubuntu1 [30.6 kB] Get:314 http://ftpmaster.internal/ubuntu eoan/universe arm64 libhdf4-0-alt arm64 4.2.14-1 [239 kB] Get:315 http://ftpmaster.internal/ubuntu eoan/universe arm64 libminizip1 arm64 1.1-8build1 [17.5 kB] Get:316 http://ftpmaster.internal/ubuntu eoan/universe arm64 liburiparser1 arm64 0.9.3-2 [34.8 kB] Get:317 http://ftpmaster.internal/ubuntu eoan/universe arm64 libkmlbase1 arm64 1.3.0-8 [42.7 kB] Get:318 http://ftpmaster.internal/ubuntu eoan/universe arm64 libkmldom1 arm64 1.3.0-8 [137 kB] Get:319 http://ftpmaster.internal/ubuntu eoan/universe arm64 libkmlengine1 arm64 1.3.0-8 [65.8 kB] Get:320 http://ftpmaster.internal/ubuntu eoan/universe arm64 libnetcdf13 arm64 1:4.6.2-1build1 [331 kB] Get:321 http://ftpmaster.internal/ubuntu eoan/main arm64 libltdl7 arm64 2.4.6-11 [37.3 kB] Get:322 http://ftpmaster.internal/ubuntu eoan/main arm64 libodbc1 arm64 2.3.6-0.1build1 [168 kB] Get:323 http://ftpmaster.internal/ubuntu eoan/universe arm64 libogdi4.1 arm64 4.1.0+ds-1build1 [174 kB] Get:324 http://ftpmaster.internal/ubuntu eoan/main arm64 liblcms2-2 arm64 2.9-4 [131 kB] Get:325 http://ftpmaster.internal/ubuntu eoan/main arm64 libnspr4 arm64 2:4.21-2build1 [99.5 kB] Get:326 http://ftpmaster.internal/ubuntu eoan/main arm64 libnss3 arm64 2:3.45-1ubuntu2 [1087 kB] Get:327 http://ftpmaster.internal/ubuntu eoan/main arm64 libpoppler90 arm64 0.80.0-0ubuntu1 [831 kB] Get:328 http://ftpmaster.internal/ubuntu eoan/main arm64 libpq5 arm64 11.5-1 [100 kB] Get:329 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqhull7 arm64 2015.2-4 [131 kB] Get:330 http://ftpmaster.internal/ubuntu eoan/universe arm64 libspatialite7 arm64 4.3.0a-6 [1176 kB] Get:331 http://ftpmaster.internal/ubuntu eoan/universe arm64 libxerces-c3.2 arm64 3.2.2+debian-1build1 [781 kB] Get:332 http://ftpmaster.internal/ubuntu eoan/main arm64 odbcinst arm64 2.3.6-0.1build1 [14.6 kB] Get:333 http://ftpmaster.internal/ubuntu eoan/main arm64 odbcinst1debian2 arm64 2.3.6-0.1build1 [42.1 kB] Get:334 http://ftpmaster.internal/ubuntu eoan/universe arm64 libgdal20 arm64 2.4.2+dfsg-1build2 [5263 kB] Get:335 http://ftpmaster.internal/ubuntu eoan/universe arm64 libgeos-dev arm64 3.7.2-1 [78.1 kB] Get:336 http://ftpmaster.internal/ubuntu eoan/main arm64 libgif-dev arm64 5.1.4-3ubuntu1 [20.6 kB] Get:337 http://ftpmaster.internal/ubuntu eoan/universe arm64 libgl2ps1.4 arm64 1.4.0+dfsg1-2 [32.7 kB] Get:338 http://ftpmaster.internal/ubuntu eoan/universe arm64 libgl2ps-dev arm64 1.4.0+dfsg1-2 [12.9 kB] Get:339 http://ftpmaster.internal/ubuntu eoan/main arm64 libgles1 arm64 1.1.1-0ubuntu1 [12.5 kB] Get:340 http://ftpmaster.internal/ubuntu eoan/main arm64 libglu1-mesa arm64 9.0.1-0ubuntu1 [146 kB] Get:341 http://ftpmaster.internal/ubuntu eoan/main arm64 xorg-sgml-doctools all 1:1.11-1 [12.9 kB] Get:342 http://ftpmaster.internal/ubuntu eoan/main arm64 x11proto-dev all 2018.4-4 [251 kB] Get:343 http://ftpmaster.internal/ubuntu eoan/main arm64 x11proto-core-dev all 2018.4-4 [2620 B] Get:344 http://ftpmaster.internal/ubuntu eoan/main arm64 libxau-dev arm64 1:1.0.9-0ubuntu1 [9728 B] Get:345 http://ftpmaster.internal/ubuntu eoan/main arm64 libxdmcp-dev arm64 1:1.1.3-0ubuntu1 [25.1 kB] Get:346 http://ftpmaster.internal/ubuntu eoan/main arm64 xtrans-dev all 1.3.5-1build1 [70.7 kB] Get:347 http://ftpmaster.internal/ubuntu eoan/main arm64 libpthread-stubs0-dev arm64 0.4-1 [5376 B] Get:348 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb1-dev arm64 1.13.1-2 [80.1 kB] Get:349 http://ftpmaster.internal/ubuntu eoan/main arm64 libx11-dev arm64 2:1.6.7-1 [633 kB] Get:350 http://ftpmaster.internal/ubuntu eoan/main arm64 mesa-common-dev arm64 19.1.6-1ubuntu1 [651 kB] Get:351 http://ftpmaster.internal/ubuntu eoan/main arm64 libglvnd-core-dev arm64 1.1.1-0ubuntu1 [12.6 kB] Get:352 http://ftpmaster.internal/ubuntu eoan/main arm64 libgles2 arm64 1.1.1-0ubuntu1 [18.0 kB] Get:353 http://ftpmaster.internal/ubuntu eoan/main arm64 libopengl0 arm64 1.1.1-0ubuntu1 [32.6 kB] Get:354 http://ftpmaster.internal/ubuntu eoan/main arm64 libglvnd-dev arm64 1.1.1-0ubuntu1 [3396 B] Get:355 http://ftpmaster.internal/ubuntu eoan/main arm64 libx11-xcb-dev arm64 2:1.6.7-1 [9772 B] Get:356 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-dri3-dev arm64 1.13.1-2 [7576 B] Get:357 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-render0-dev arm64 1.13.1-2 [18.7 kB] Get:358 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-randr0-dev arm64 1.13.1-2 [20.9 kB] Get:359 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-shape0-dev arm64 1.13.1-2 [7296 B] Get:360 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-xfixes0-dev arm64 1.13.1-2 [12.0 kB] Get:361 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-sync-dev arm64 1.13.1-2 [10.9 kB] Get:362 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-present-dev arm64 1.13.1-2 [7044 B] Get:363 http://ftpmaster.internal/ubuntu eoan/main arm64 libxshmfence-dev arm64 1.3-1 [3544 B] Get:364 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-dri2-0-dev arm64 1.13.1-2 [8700 B] Get:365 http://ftpmaster.internal/ubuntu eoan/main arm64 libxcb-glx0-dev arm64 1.13.1-2 [28.5 kB] Get:366 http://ftpmaster.internal/ubuntu eoan/main arm64 x11proto-fixes-dev all 1:2018.4-4 [2620 B] Get:367 http://ftpmaster.internal/ubuntu eoan/main arm64 libxfixes-dev arm64 1:5.0.3-1 [10.4 kB] Get:368 http://ftpmaster.internal/ubuntu eoan/main arm64 x11proto-damage-dev all 1:2018.4-4 [2620 B] Get:369 http://ftpmaster.internal/ubuntu eoan/main arm64 libxdamage-dev arm64 1:1.1.5-1 [5260 B] Get:370 http://ftpmaster.internal/ubuntu eoan/main arm64 x11proto-xext-dev all 2018.4-4 [2620 B] Get:371 http://ftpmaster.internal/ubuntu eoan/main arm64 libxext-dev arm64 2:1.3.4-0ubuntu1 [82.1 kB] Get:372 http://ftpmaster.internal/ubuntu eoan/main arm64 x11proto-xf86vidmode-dev all 2018.4-4 [2632 B] Get:373 http://ftpmaster.internal/ubuntu eoan/main arm64 libxxf86vm-dev arm64 1:1.1.4-1build1 [13.3 kB] Get:374 http://ftpmaster.internal/ubuntu eoan/main arm64 libgl1-mesa-dev arm64 19.1.6-1ubuntu1 [6036 B] Get:375 http://ftpmaster.internal/ubuntu eoan/main arm64 libglu1-mesa-dev arm64 9.0.1-0ubuntu1 [185 kB] Get:376 http://ftpmaster.internal/ubuntu eoan/universe arm64 libhwloc5 arm64 1.11.13-1 [94.3 kB] Get:377 http://ftpmaster.internal/ubuntu eoan/main arm64 libpciaccess0 arm64 0.16-0ubuntu1 [17.1 kB] Get:378 http://ftpmaster.internal/ubuntu eoan/main arm64 ocl-icd-libopencl1 arm64 2.2.11-1ubuntu1 [29.2 kB] Get:379 http://ftpmaster.internal/ubuntu eoan/universe arm64 libhwloc-plugins arm64 1.11.13-1 [12.4 kB] Get:380 http://ftpmaster.internal/ubuntu eoan/universe arm64 libpmix2 arm64 3.1.4-1 [397 kB] Get:381 http://ftpmaster.internal/ubuntu eoan/universe arm64 libopenmpi3 arm64 3.1.3-11build1 [1936 kB] Get:382 http://ftpmaster.internal/ubuntu eoan/universe arm64 libhdf5-openmpi-103 arm64 1.10.4+repack-10 [1179 kB] Get:383 http://ftpmaster.internal/ubuntu eoan/main arm64 libice-dev arm64 2:1.0.10-0ubuntu1 [46.2 kB] Get:384 http://ftpmaster.internal/ubuntu eoan/main arm64 libjs-jquery all 3.3.1~dfsg-3 [329 kB] Get:385 http://ftpmaster.internal/ubuntu eoan/main arm64 libjs-underscore all 1.9.1~dfsg-1 [98.6 kB] Get:386 http://ftpmaster.internal/ubuntu eoan/main arm64 libjs-sphinxdoc all 1.8.5-3 [96.5 kB] Get:387 http://ftpmaster.internal/ubuntu eoan/universe arm64 libkmlconvenience1 arm64 1.3.0-8 [41.6 kB] Get:388 http://ftpmaster.internal/ubuntu eoan/universe arm64 libkmlregionator1 arm64 1.3.0-8 [18.3 kB] Get:389 http://ftpmaster.internal/ubuntu eoan/universe arm64 libkmlxsd1 arm64 1.3.0-8 [25.6 kB] Get:390 http://ftpmaster.internal/ubuntu eoan/main arm64 libltdl-dev arm64 2.4.6-11 [162 kB] Get:391 http://ftpmaster.internal/ubuntu eoan/universe arm64 libminizip-dev arm64 1.1-8build1 [24.7 kB] Get:392 http://ftpmaster.internal/ubuntu eoan/universe arm64 libnetcdf-c++4 arm64 4.2-11 [31.1 kB] Get:393 http://ftpmaster.internal/ubuntu eoan/universe arm64 libnetcdf-dev arm64 1:4.6.2-1build1 [38.8 kB] Get:394 http://ftpmaster.internal/ubuntu eoan/universe arm64 libnetcdf-cxx-legacy-dev arm64 4.2-11 [52.4 kB] Get:395 http://ftpmaster.internal/ubuntu eoan/main arm64 libnl-3-dev arm64 3.4.0-1 [93.7 kB] Get:396 http://ftpmaster.internal/ubuntu eoan/main arm64 libnl-route-3-dev arm64 3.4.0-1 [166 kB] Get:397 http://ftpmaster.internal/ubuntu eoan/universe arm64 libogdi-dev arm64 4.1.0+ds-1build1 [22.1 kB] Get:398 http://ftpmaster.internal/ubuntu eoan/main arm64 libogg-dev arm64 1.3.4-0ubuntu1 [161 kB] Get:399 http://ftpmaster.internal/ubuntu eoan/main arm64 libpcre16-3 arm64 2:8.39-12 [126 kB] Get:400 http://ftpmaster.internal/ubuntu eoan/main arm64 libpcre32-3 arm64 2:8.39-12 [119 kB] Get:401 http://ftpmaster.internal/ubuntu eoan/main arm64 libpcrecpp0v5 arm64 2:8.39-12 [14.8 kB] Get:402 http://ftpmaster.internal/ubuntu eoan/main arm64 libpcre3-dev arm64 2:8.39-12 [468 kB] Get:403 http://ftpmaster.internal/ubuntu eoan/main arm64 libpoppler-dev arm64 0.80.0-0ubuntu1 [5104 B] Get:404 http://ftpmaster.internal/ubuntu eoan/main arm64 libpoppler-private-dev arm64 0.80.0-0ubuntu1 [174 kB] Get:405 http://ftpmaster.internal/ubuntu eoan/main arm64 libpq-dev arm64 11.5-1 [154 kB] Get:406 http://ftpmaster.internal/ubuntu eoan/universe arm64 libpython2.7 arm64 2.7.16-4 [958 kB] Get:407 http://ftpmaster.internal/ubuntu eoan/universe arm64 libpython2.7-dev arm64 2.7.16-4 [27.1 MB] Get:408 http://ftpmaster.internal/ubuntu eoan/universe arm64 libpython2-dev arm64 2.7.16-1 [7492 B] Get:409 http://ftpmaster.internal/ubuntu eoan/universe arm64 libpython-dev arm64 2.7.16-1 [5880 B] Get:410 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqhull-r7 arm64 2015.2-4 [127 kB] Get:411 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqhull-dev arm64 2015.2-4 [325 kB] Get:412 http://ftpmaster.internal/ubuntu eoan/universe arm64 libqt5opengl5 arm64 5.12.4+dfsg-4build1 [127 kB] Get:413 http://ftpmaster.internal/ubuntu eoan/main arm64 libsm-dev arm64 2:1.2.3-1 [16.4 kB] Get:414 http://ftpmaster.internal/ubuntu eoan/main arm64 libsqlite3-dev arm64 3.29.0-2 [635 kB] Get:415 http://ftpmaster.internal/ubuntu eoan/universe arm64 libswscale5 arm64 7:4.1.4-1build2 [130 kB] Get:416 http://ftpmaster.internal/ubuntu eoan/universe arm64 libswscale-dev arm64 7:4.1.4-1build2 [147 kB] Get:417 http://ftpmaster.internal/ubuntu eoan/universe arm64 libsymspg1 arm64 1.14.1-2 [67.0 kB] Get:418 http://ftpmaster.internal/ubuntu eoan/universe arm64 libsymspg-dev arm64 1.14.1-2 [76.0 kB] Get:419 http://ftpmaster.internal/ubuntu eoan/main arm64 libtcl8.6 arm64 8.6.9+dfsg-2 [846 kB] Get:420 http://ftpmaster.internal/ubuntu eoan/main arm64 libtheora-dev arm64 1.1.1+dfsg.1-15 [172 kB] Get:421 http://ftpmaster.internal/ubuntu eoan/main arm64 libjbig-dev arm64 2.1-3.1build1 [23.3 kB] Get:422 http://ftpmaster.internal/ubuntu eoan/main arm64 liblzma-dev arm64 5.2.4-1 [144 kB] Get:423 http://ftpmaster.internal/ubuntu eoan/main arm64 libtiffxx5 arm64 4.0.10+git190818-1 [5844 B] Get:424 http://ftpmaster.internal/ubuntu eoan/main arm64 libtiff-dev arm64 4.0.10+git190818-1 [274 kB] Get:425 http://ftpmaster.internal/ubuntu eoan/main arm64 libxft2 arm64 2.3.3-0ubuntu1 [35.9 kB] Get:426 http://ftpmaster.internal/ubuntu eoan/main arm64 libxss1 arm64 1:1.2.3-1 [8080 B] Get:427 http://ftpmaster.internal/ubuntu eoan/main arm64 libtk8.6 arm64 8.6.9-2 [670 kB] Get:428 http://ftpmaster.internal/ubuntu eoan/universe arm64 liburiparser-dev arm64 0.9.3-2 [12.0 kB] Get:429 http://ftpmaster.internal/ubuntu eoan/universe arm64 libvoro++1 arm64 0.4.6+dfsg1-3 [96.2 kB] Get:430 http://ftpmaster.internal/ubuntu eoan/universe arm64 libeigen3-dev all 3.3.7-1 [814 kB] Get:431 http://ftpmaster.internal/ubuntu eoan/universe arm64 libepsilon-dev arm64 0.9.2+dfsg-4 [47.3 kB] Get:432 http://ftpmaster.internal/ubuntu eoan/universe arm64 libfreexl-dev arm64 1.0.5-3 [30.6 kB] Get:433 http://ftpmaster.internal/ubuntu eoan/universe arm64 libgeotiff-dev arm64 1.4.3-1 [77.7 kB] Get:434 http://ftpmaster.internal/ubuntu eoan/universe arm64 libhdf4-alt-dev arm64 4.2.14-1 [364 kB] Get:435 http://ftpmaster.internal/ubuntu eoan/main arm64 libjson-c-dev arm64 0.13.1+dfsg-4 [46.4 kB] Get:436 http://ftpmaster.internal/ubuntu eoan/universe arm64 libkml-dev arm64 1.3.0-8 [933 kB] Get:437 http://ftpmaster.internal/ubuntu eoan/universe arm64 libopenjp2-7-dev arm64 2.3.0-2 [26.6 kB] Get:438 http://ftpmaster.internal/ubuntu eoan/universe arm64 libproj-dev arm64 5.2.0-1 [218 kB] Get:439 http://ftpmaster.internal/ubuntu eoan/universe arm64 libspatialite-dev arm64 4.3.0a-6 [1398 kB] Get:440 http://ftpmaster.internal/ubuntu eoan/main arm64 libwebpdemux2 arm64 0.6.1-2 [8868 B] Get:441 http://ftpmaster.internal/ubuntu eoan/main arm64 libwebp-dev arm64 0.6.1-2 [261 kB] Get:442 http://ftpmaster.internal/ubuntu eoan/universe arm64 libxerces-c-dev arm64 3.2.2+debian-1build1 [1622 kB] Get:443 http://ftpmaster.internal/ubuntu eoan/main arm64 libzstd-dev arm64 1.4.3+dfsg-1 [265 kB] Get:444 http://ftpmaster.internal/ubuntu eoan/main arm64 unixodbc-dev arm64 2.3.6-0.1build1 [209 kB] Get:445 http://ftpmaster.internal/ubuntu eoan/universe arm64 libgdal-dev arm64 2.4.2+dfsg-1build2 [7302 kB] Get:446 http://ftpmaster.internal/ubuntu eoan/universe arm64 openmpi-common all 3.1.3-11build1 [147 kB] Get:447 http://ftpmaster.internal/ubuntu eoan/main arm64 libibverbs-dev arm64 24.0-2 [425 kB] Get:448 http://ftpmaster.internal/ubuntu eoan/main arm64 libnuma-dev arm64 2.0.12-1 [33.3 kB] Get:449 http://ftpmaster.internal/ubuntu eoan/universe arm64 libhwloc-dev arm64 1.11.13-1 [160 kB] Get:450 http://ftpmaster.internal/ubuntu eoan/universe arm64 openmpi-bin arm64 3.1.3-11build1 [86.2 kB] Get:451 http://ftpmaster.internal/ubuntu eoan/universe arm64 libopenmpi-dev arm64 3.1.3-11build1 [861 kB] Get:452 http://ftpmaster.internal/ubuntu eoan/universe arm64 libhdf5-openmpi-dev arm64 1.10.4+repack-10 [2608 kB] Get:453 http://ftpmaster.internal/ubuntu eoan/universe arm64 mpi-default-dev arm64 1.13 [3748 B] Get:454 http://ftpmaster.internal/ubuntu eoan/universe arm64 libhdf5-mpi-dev arm64 1.10.4+repack-10 [4744 B] Get:455 http://ftpmaster.internal/ubuntu eoan/main arm64 libjsoncpp-dev arm64 1.7.4-3 [82.9 kB] Get:456 http://ftpmaster.internal/ubuntu eoan/main arm64 libxt6 arm64 1:1.1.5-1 [128 kB] Get:457 http://ftpmaster.internal/ubuntu eoan/universe arm64 libvtk6.3 arm64 6.3.0+dfsg2-2build7 [28.4 MB] Get:458 http://ftpmaster.internal/ubuntu eoan/universe arm64 libvtk6.3-qt arm64 6.3.0+dfsg2-2build7 [218 kB] Get:459 http://ftpmaster.internal/ubuntu eoan/universe arm64 libvtk6-jni arm64 6.3.0+dfsg2-2build7 [3978 kB] Get:460 http://ftpmaster.internal/ubuntu eoan/universe arm64 libvtk6-java arm64 6.3.0+dfsg2-2build7 [3306 kB] Get:461 http://ftpmaster.internal/ubuntu eoan/main arm64 libxrender-dev arm64 1:0.9.10-1 [22.9 kB] Get:462 http://ftpmaster.internal/ubuntu eoan/main arm64 libxft-dev arm64 2.3.3-0ubuntu1 [47.4 kB] Get:463 http://ftpmaster.internal/ubuntu eoan/main arm64 x11proto-scrnsaver-dev all 2018.4-4 [2628 B] Get:464 http://ftpmaster.internal/ubuntu eoan/main arm64 libxss-dev arm64 1:1.2.3-1 [11.9 kB] Get:465 http://ftpmaster.internal/ubuntu eoan/main arm64 libxt-dev arm64 1:1.1.5-1 [374 kB] Get:466 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-cbor arm64 1.0.0-1build2 [20.2 kB] Get:467 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-concurrent.futures all 3.3.0-1 [37.7 kB] Get:468 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-configparser all 3.5.0b2-3 [62.7 kB] Get:469 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-future all 0.16.0-1 [336 kB] Get:470 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-lz4 arm64 1.1.0+dfsg-1build1 [25.1 kB] Get:471 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-cffi-backend arm64 1.12.3-1build1 [69.4 kB] Get:472 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-six all 1.12.0-2 [11.6 kB] Get:473 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-nacl arm64 1.3.0-2 [44.7 kB] Get:474 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-asn1crypto all 0.24.0-1 [72.7 kB] Get:475 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-enum34 all 1.1.6-2 [34.8 kB] Get:476 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-ipaddress all 1.0.17-1 [18.2 kB] Get:477 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-cryptography arm64 2.6.1-3ubuntu1 [216 kB] Get:478 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-openssl all 19.0.0-1 [43.1 kB] Get:479 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-pyqrcode all 1.2.1-2 [30.1 kB] Get:480 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-attr all 18.2.0-1 [29.6 kB] Get:481 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-pyasn1 all 0.4.2-3 [46.7 kB] Get:482 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-pyasn1-modules all 0.2.1-0.2 [32.8 kB] Get:483 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-service-identity all 18.1.0-5 [10.6 kB] Get:484 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-snappy arm64 0.5.3-1build1 [16.4 kB] Get:485 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-trie all 0.2+ds-1 [7076 B] Get:486 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-trollius all 2.1~b1-5 [83.9 kB] Get:487 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-twisted-bin arm64 18.9.0-3ubuntu1 [14.4 kB] Get:488 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-pkg-resources all 41.1.0-1 [129 kB] Get:489 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-zope.interface arm64 4.3.2-1build4 [81.8 kB] Get:490 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-automat all 0.6.0-1 [25.1 kB] Get:491 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-constantly all 15.1.0-1 [7960 B] Get:492 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-hyperlink all 17.3.1-2 [27.5 kB] Get:493 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-incremental all 16.10.1-3 [14.4 kB] Get:494 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-idna all 2.6-2 [32.5 kB] Get:495 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-twisted-core all 18.9.0-3ubuntu1 [1988 kB] Get:496 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-twisted all 18.9.0-3ubuntu1 [3728 B] Get:497 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-txaio all 2.10.0-1 [18.7 kB] Get:498 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-u-msgpack all 2.1-1 [7268 B] Get:499 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-ubjson arm64 0.14.0-1 [30.4 kB] Get:500 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-wsaccel arm64 0.6.2-1build2 [35.2 kB] Get:501 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-autobahn all 17.10.1+dfsg1-5 [157 kB] Get:502 http://ftpmaster.internal/ubuntu eoan/universe arm64 mpi-default-bin arm64 1.13 [2968 B] Get:503 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-mpi4py arm64 3.0.2-13 [385 kB] Get:504 http://ftpmaster.internal/ubuntu eoan/universe arm64 python-vtk6 arm64 6.3.0+dfsg2-2build7 [271 kB] Get:505 http://ftpmaster.internal/ubuntu eoan/main arm64 tcl8.6 arm64 8.6.9+dfsg-2 [14.4 kB] Get:506 http://ftpmaster.internal/ubuntu eoan/main arm64 tcl8.6-dev arm64 8.6.9+dfsg-2 [873 kB] Get:507 http://ftpmaster.internal/ubuntu eoan/universe arm64 tcl arm64 8.6.9+1 [5112 B] Get:508 http://ftpmaster.internal/ubuntu eoan/universe arm64 tcl-dev arm64 8.6.9+1 [5756 B] Get:509 http://ftpmaster.internal/ubuntu eoan/universe arm64 tcl-vtk6 arm64 6.3.0+dfsg2-2build7 [133 kB] Get:510 http://ftpmaster.internal/ubuntu eoan/main arm64 tk8.6 arm64 8.6.9-2 [12.3 kB] Get:511 http://ftpmaster.internal/ubuntu eoan/main arm64 tk8.6-dev arm64 8.6.9-2 [687 kB] Get:512 http://ftpmaster.internal/ubuntu eoan/universe arm64 tk arm64 8.6.9+1 [3240 B] Get:513 http://ftpmaster.internal/ubuntu eoan/universe arm64 tk-dev arm64 8.6.9+1 [3056 B] Get:514 http://ftpmaster.internal/ubuntu eoan/universe arm64 vtk6 arm64 6.3.0+dfsg2-2build7 [163 kB] Get:515 http://ftpmaster.internal/ubuntu eoan/universe arm64 libvtk6-dev arm64 6.3.0+dfsg2-2build7 [2144 kB] Get:516 http://ftpmaster.internal/ubuntu eoan/universe arm64 voro++-dev arm64 0.4.6+dfsg1-3 [126 kB] Get:517 http://ftpmaster.internal/ubuntu eoan/main arm64 opencl-c-headers all 2.2~2019.01.17-g49f07d3-1 [29.9 kB] Get:518 http://ftpmaster.internal/ubuntu eoan/main arm64 ocl-icd-opencl-dev arm64 2.2.11-1ubuntu1 [3724 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 268 MB in 13s (21.1 MB/s) Selecting previously unselected package libbsd0:arm64. 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Setting up mysql-common (5.8+1.0.5ubuntu2) ... update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libmysqlclient21:arm64 (8.0.16-0ubuntu3) ... Setting up libxau6:arm64 (1:1.0.9-0ubuntu1) ... Setting up libdouble-conversion3:arm64 (3.1.5-2) ... Setting up libkeyutils1:arm64 (1.6-6) ... Setting up libpsl5:arm64 (0.20.2-2) ... Setting up libfftw3-single3:arm64 (3.3.8-2) ... Setting up libsodium23:arm64 (1.0.18-1) ... Setting up libmpg123-0:arm64 (1.25.12-1build1) ... Setting up libogg0:arm64 (1.3.4-0ubuntu1) ... Setting up libzstd-dev:arm64 (1.4.3+dfsg-1) ... Setting up mime-support (3.63ubuntu1) ... Setting up libspeex1:arm64 (1.2~rc1.2-1ubuntu2) ... Setting up proj-data (5.2.0-1) ... Setting up libshine3:arm64 (3.1.1-2) ... Setting up libglvnd-core-dev:arm64 (1.1.1-0ubuntu1) ... Setting up libpcre16-3:arm64 (2:8.39-12) ... Setting up hdf5-helpers (1.10.4+repack-10) ... Setting up libtwolame0:arm64 (0.3.13-4) ... Setting up libhyphen0:arm64 (2.8.8-7) ... Setting up libdatrie1:arm64 (0.2.12-3) ... Setting up libmagic-mgc (1:5.37-5) ... Setting up libogdi4.1 (4.1.0+ds-1build1) ... Setting up libgsm1:arm64 (1.0.18-2) ... Setting up libx264-155:arm64 (2:0.155.2917+git0a84d98-2) ... Setting up libcharls2:arm64 (2.0.0+dfsg-1) ... Setting up libminizip1:arm64 (1.1-8build1) ... Setting up libsoxr0:arm64 (0.1.3-1) ... Setting up libarchive-zip-perl (1.65-1) ... Setting up libglib2.0-0:arm64 (2.62.0-1) ... No schema files found: doing nothing. Setting up libglvnd0:arm64 (1.1.1-0ubuntu1) ... Setting up libjson-c-dev:arm64 (0.13.1+dfsg-4) ... Setting up libaom0:arm64 (1.0.0-3) ... Setting up libbrotli1:arm64 (1.0.7-2) ... Setting up libgdk-pixbuf2.0-common (2.39.2-3) ... Setting up libcodec2-0.8.1:arm64 (0.8.1-2) ... Setting up libproj13:arm64 (5.2.0-1) ... Setting up libsymspg1:arm64 (1.14.1-2) ... Setting up x11-common (1:7.7+19ubuntu12) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libsensors-config (1:3.5.0-3ubuntu1) ... Setting up libnghttp2-14:arm64 (1.39.2-1) ... Setting up libmagic1:arm64 (1:5.37-5) ... Setting up libfftw3-long3:arm64 (3.3.8-2) ... Setting up gettext-base (0.19.8.1-9) ... Setting up xkb-data (2.26-2ubuntu1) ... Setting up libqhull7:arm64 (2015.2-4) ... Setting up file (1:5.37-5) ... Setting up libogg-dev:arm64 (1.3.4-0ubuntu1) ... Setting up libxvidcore4:arm64 (2:1.3.5-1) ... Setting up libepsilon1:arm64 (0.9.2+dfsg-4) ... Setting up libldap-common (2.4.48+dfsg-1ubuntu1) ... Setting up libpthread-stubs0-dev:arm64 (0.4-1) ... Setting up libjbig0:arm64 (2.1-3.1build1) ... Setting up libpcre2-16-0:arm64 (10.32-5) ... Setting up libaec0:arm64 (1.0.4-1) ... Setting up libicu63:arm64 (63.2-2) ... Setting up gdal-data (2.4.2+dfsg-1build2) ... Setting up libopengl0:arm64 (1.1.1-0ubuntu1) ... Setting up libsnappy1v5:arm64 (1.1.7-1) ... Setting up libkrb5support0:arm64 (1.17-6) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-1build3) ... Setting up libpython2.7-stdlib:arm64 (2.7.16-4) ... Setting up libcap2-bin (1:2.25-2) ... Setting up libminizip-dev:arm64 (1.1-8build1) ... Setting up xtrans-dev (1.3.5-1build1) ... Setting up autotools-dev (20180224.1) ... Setting up libblas3:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libuv1:arm64 (1.30.1-1) ... Setting up libgles2:arm64 (1.1.1-0ubuntu1) ... Setting up libexpat1-dev:arm64 (2.2.7-2) ... Setting up libva2:arm64 (2.5.0-1) ... Setting up libsqlite3-dev:arm64 (3.29.0-2) ... Setting up libfreetype6:arm64 (2.9.1-4) ... Setting up libx11-data (2:1.6.7-1) ... Setting up libnspr4:arm64 (2:4.21-2build1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2) ... Setting up uuid-dev:arm64 (2.34-0.1ubuntu2) ... Setting up libavahi-common-data:arm64 (0.7-4ubuntu5) ... Setting up libgles1:arm64 (1.1.1-0ubuntu1) ... Setting up libdbus-1-3:arm64 (1.12.14-1ubuntu2) ... Setting up libsigsegv2:arm64 (2.12-2) ... Setting up libfribidi0:arm64 (1.0.5-3.1) ... Setting up libopus0:arm64 (1.3.1-0ubuntu1) ... Setting up libgeos-3.7.2:arm64 (3.7.2-1) ... Setting up libssl-dev:arm64 (1.1.1c-1ubuntu4) ... Setting up libproj-dev:arm64 (5.2.0-1) ... Setting up libpcre32-3:arm64 (2:8.39-12) ... Setting up libvorbis0a:arm64 (1.3.6-2) ... Setting up liborc-0.4-0:arm64 (1:0.4.30-1) ... Setting up libtcl8.6:arm64 (8.6.9+dfsg-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up libwebp6:arm64 (0.6.1-2) ... Setting up icu-devtools (63.2-2) ... Setting up libgeos-c1v5:arm64 (3.7.2-1) ... Setting up pkg-config (0.29.1-0ubuntu3) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up ucf (3.0038+nmu1) ... Setting up libsensors5:arm64 (1:3.5.0-3ubuntu1) ... Setting up libk5crypto3:arm64 (1.17-6) ... Setting up libjpeg-turbo8:arm64 (2.0.3-0ubuntu1) ... Setting up libqt5core5a:arm64 (5.12.4+dfsg-4build1) ... Setting up libltdl7:arm64 (2.4.6-11) ... Setting up opencl-c-headers (2.2~2019.01.17-g49f07d3-1) ... Setting up libfftw3-double3:arm64 (3.3.8-2) ... Setting up libglapi-mesa:arm64 (19.1.6-1ubuntu1) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-1build3) ... Setting up libevent-core-2.1-6:arm64 (2.1.8-stable-4build1) ... Setting up libgfortran5:arm64 (9.2.1-8ubuntu1) ... Setting up libmtdev1:arm64 (1.1.5-1ubuntu3) ... Setting up libroken18-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libevent-2.1-6:arm64 (2.1.8-stable-4build1) ... Setting up liblzma-dev:arm64 (5.2.4-1) ... Setting up libgif7:arm64 (5.1.4-3ubuntu1) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-1ubuntu3) ... Setting up liburiparser1:arm64 (0.9.3-2) ... Setting up libnuma1:arm64 (2.0.12-1) ... Setting up libx265-176:arm64 (3.1.1-2) ... Setting up libfreexl1:arm64 (1.0.5-3) ... Setting up ocl-icd-libopencl1:arm64 (2.2.11-1ubuntu1) ... Setting up libgif-dev (5.1.4-3ubuntu1) ... Setting up libxshmfence1:arm64 (1.3-1) ... Setting up libvpx6:arm64 (1.8.1-2) ... Setting up libqt5dbus5:arm64 (5.12.4+dfsg-4build1) ... Setting up librhash0:arm64 (1.3.8-1) ... Setting up libwavpack1:arm64 (5.1.0-7) ... Setting up libfyba0:arm64 (4.1.1-6) ... Setting up libuchardet0:arm64 (0.0.6-3) ... Setting up libkmlbase1:arm64 (1.3.0-8) ... Setting up libnl-3-200:arm64 (3.4.0-1) ... Setting up openmpi-common (3.1.3-11build1) ... Setting up libopenjp2-7:arm64 (2.3.0-2) ... Setting up libsub-override-perl (0.09-2) ... Setting up libharfbuzz0b:arm64 (2.6.1-3) ... Setting up libthai-data (0.1.28-3) ... Setting up xorg-sgml-doctools (1:1.11-1) ... Setting up cmake-data (3.13.4-1build1) ... Setting up libkrb5-3:arm64 (1.17-6) ... Setting up libboost-dev:arm64 (1.67.0.2) ... Setting up libqhull-r7:arm64 (2015.2-4) ... Setting up libjs-jquery (3.3.1~dfsg-3) ... Setting up libqt5sensors5:arm64 (5.12.4-1) ... Setting up libepsilon-dev:arm64 (0.9.2+dfsg-4) ... Setting up libvoro++1 (0.4.6+dfsg1-3) ... Setting up libwebpmux3:arm64 (0.6.1-2) ... Setting up libbsd0:arm64 (0.10.0-1) ... Setting up libdrm-common (2.4.99-1) ... Setting up libelf1:arm64 (0.176-1.1) ... Setting up libevdev2:arm64 (1.8.0+dfsg-2) ... Setting up libogdi-dev (4.1.0+ds-1build1) ... Setting up libicu-dev:arm64 (63.2-2) ... Setting up libxml2:arm64 (2.9.4+dfsg1-7ubuntu3) ... Setting up iso-codes (4.3-1) ... Setting up libgudev-1.0-0:arm64 (1:233-0ubuntu1) ... Setting up libzvbi-common (0.2.35-16) ... Setting up libgstreamer1.0-0:arm64 (1.16.0-3) ... Setcap worked! gst-ptp-helper is not suid! Setting up libmp3lame0:arm64 (3.100-2build1) ... Setting up libblas-dev:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode Setting up libsz2:arm64 (1.0.4-1) ... Setting up libmysqlclient-dev (8.0.16-0ubuntu3) ... Setting up libvorbisenc2:arm64 (1.3.6-2) ... Setting up libjsoncpp1:arm64 (1.7.4-3) ... Setting up libheimbase1-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libkmlxsd1:arm64 (1.3.0-8) ... Setting up libjs-underscore (1.9.1~dfsg-1) ... Setting up libwacom-common (0.32-1) ... Setting up libxkbcommon0:arm64 (0.8.4-1) ... Setting up libkmldom1:arm64 (1.3.0-8) ... Setting up libwayland-client0:arm64 (1.17.0-1) ... Setting up libjpeg8:arm64 (8c-2ubuntu8) ... Setting up default-libmysqlclient-dev:arm64 (1.0.5ubuntu2) ... Setting up libspatialite7:arm64 (4.3.0a-6) ... Setting up x11proto-dev (2018.4-4) ... Setting up libfile-stripnondeterminism-perl (1.6.0-1) ... Setting up libzvbi0:arm64 (0.2.35-16) ... Setting up libevent-pthreads-2.1-6:arm64 (2.1.8-stable-4build1) ... Setting up libice6:arm64 (2:1.0.10-0ubuntu1) ... Setting up libjsoncpp-dev:arm64 (1.7.4-3) ... Setting up libcharls-dev:arm64 (2.0.0+dfsg-1) ... Setting up libjpeg-turbo8-dev:arm64 (2.0.3-0ubuntu1) ... Setting up libxdmcp6:arm64 (1:1.1.3-0ubuntu1) ... Setting up libpython2.7:arm64 (2.7.16-4) ... Setting up tcl8.6 (8.6.9+dfsg-2) ... Setting up liblapack3:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libpython2.7-dev:arm64 (2.7.16-4) ... Setting up libxcb1:arm64 (1.13.1-2) ... Setting up libxcb-xfixes0:arm64 (1.13.1-2) ... Setting up libkmlengine1:arm64 (1.3.0-8) ... Setting up libxau-dev:arm64 (1:1.0.9-0ubuntu1) ... Setting up libsymspg-dev:arm64 (1.14.1-2) ... Setting up python2.7 (2.7.16-4) ... Setting up libxcb-xinput0:arm64 (1.13.1-2) ... Setting up libwoff1:arm64 (1.0.2-1build1) ... Setting up libkmlconvenience1:arm64 (1.3.0-8) ... Setting up libice-dev:arm64 (2:1.0.10-0ubuntu1) ... Setting up voro++-dev (0.4.6+dfsg1-3) ... Setting up libtool (2.4.6-11) ... Setting up libpython2-stdlib:arm64 (2.7.16-1) ... Setting up libarchive13:arm64 (3.3.3-4) ... Setting up libxcb-render0:arm64 (1.13.1-2) ... Setting up libxshmfence-dev:arm64 (1.3-1) ... Setting up libfftw3-bin (3.3.8-2) ... Setting up libpcre3-dev:arm64 (2:8.39-12) ... Setting up fontconfig-config (2.13.1-2ubuntu2) ... Setting up libfreexl-dev:arm64 (1.0.5-3) ... Setting up libhwloc5:arm64 (1.11.13-1) ... Setting up libfyba-dev:arm64 (4.1.1-6) ... Setting up libxcb-glx0:arm64 (1.13.1-2) ... Setting up libwebpdemux2:arm64 (0.6.1-2) ... Setting up libasn1-8-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up tcl8.6-dev:arm64 (8.6.9+dfsg-2) ... Setting up libedit2:arm64 (3.1-20190324-1) ... Setting up libqt5positioning5:arm64 (5.12.4+dfsg-1) ... Setting up libpng-dev:arm64 (1.6.37-1) ... Setting up libxcb-keysyms1:arm64 (0.4.0-1build1) ... Setting up libaec-dev:arm64 (1.0.4-1) ... Setting up libarpack2:arm64 (3.7.0-2) ... Setting up libxcb-shape0:arm64 (1.13.1-2) ... Setting up libavahi-common3:arm64 (0.7-4ubuntu5) ... Setting up libjbig-dev:arm64 (2.1-3.1build1) ... Setting up libsuperlu5:arm64 (5.2.1+dfsg1-4) ... Setting up libgfortran-9-dev:arm64 (9.2.1-8ubuntu1) ... Setting up m4 (1.4.18-2) ... Setting up libdap25:arm64 (3.20.4-1) ... Setting up libxcb-render-util0:arm64 (0.3.9-1build1) ... Setting up libgstreamer-plugins-base1.0-0:arm64 (1.16.0-4) ... Setting up libnss3:arm64 (2:3.45-1ubuntu2) ... Setting up libxcb-shm0:arm64 (1.13.1-2) ... Setting up libxcb-icccm4:arm64 (0.4.1-1.1) ... Setting up libhwloc-plugins:arm64 (1.11.13-1) ... Setting up libdapserver7v5:arm64 (3.20.4-1) ... Setting up libhcrypto4-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up python2 (2.7.16-1) ... Setting up libqt5network5:arm64 (5.12.4+dfsg-4build1) ... Setting up libxcb-util1:arm64 (0.4.0-0ubuntu3) ... Setting up libfreetype6-dev:arm64 (2.9.1-4) ... Setting up libxcb-xkb1:arm64 (1.13.1-2) ... Setting up libxcb-image0:arm64 (0.4.0-1build1) ... Setting up liburiparser-dev (0.9.3-2) ... Setting up libnuma-dev:arm64 (2.0.12-1) ... Setting up libnl-route-3-200:arm64 (3.4.0-1) ... Setting up libxcb-present0:arm64 (1.13.1-2) ... Setting up libthai0:arm64 (0.1.28-3) ... Setting up libvorbisfile3:arm64 (1.3.6-2) ... Setting up libpython-stdlib:arm64 (2.7.16-1) ... Setting up libxdmcp-dev:arm64 (1:1.1.3-0ubuntu1) ... Setting up libwind0-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libxml2-dev:arm64 (2.9.4+dfsg1-7ubuntu3) ... Setting up libwebp-dev:arm64 (0.6.1-2) ... Setting up libxcb-xinerama0:arm64 (1.13.1-2) ... Setting up x11proto-damage-dev (1:2018.4-4) ... Setting up libopenjp2-7-dev (2.3.0-2) ... Setting up libxcb-sync1:arm64 (1.13.1-2) ... Setting up libqt5qml5:arm64 (5.12.4-1) ... Setting up libkmlregionator1:arm64 (1.3.0-8) ... Setting up x11proto-core-dev (2018.4-4) ... Setting up libgeos-dev (3.7.2-1) ... Setting up libhdf5-103:arm64 (1.10.4+repack-10) ... Setting up shared-mime-info (1.10-1) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libxkbcommon-x11-0:arm64 (0.8.4-1) ... Setting up liblapack-dev:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode Setting up libeigen3-dev (3.3.7-1) ... Setting up libgssapi-krb5-2:arm64 (1.17-6) ... Setting up libcroco3:arm64 (0.6.13-1) ... Setting up libodbc1:arm64 (2.3.6-0.1build1) ... Setting up libqt5webchannel5:arm64 (5.12.4-1) ... Setting up libspatialite-dev:arm64 (4.3.0a-6) ... Setting up libjs-sphinxdoc (1.8.5-3) ... Setting up libqhull-dev:arm64 (2015.2-4) ... Setting up ocl-icd-opencl-dev:arm64 (2.2.11-1ubuntu1) ... Setting up libssh-4:arm64 (0.9.0-1) ... Setting up autoconf (2.69-11) ... Setting up libhdf4-0-alt (4.2.14-1) ... Setting up libxcb-dri2-0:arm64 (1.13.1-2) ... Setting up x11proto-xf86vidmode-dev (2018.4-4) ... Setting up x11proto-xext-dev (2018.4-4) ... Setting up libdrm2:arm64 (2.4.99-1) ... Setting up dwz (0.13-1) ... Setting up libnl-3-dev:arm64 (3.4.0-1) ... Setting up libva-drm2:arm64 (2.5.0-1) ... Setting up groff-base (1.22.4-3) ... Setting up libxcb-randr0:arm64 (1.13.1-2) ... Setting up tcl (8.6.9+1) ... Setting up libxslt1.1:arm64 (1.1.33-0ubuntu1) ... Setting up libx11-6:arm64 (2:1.6.7-1) ... Setting up libpython2-dev:arm64 (2.7.16-1) ... Setting up libtiff5:arm64 (4.0.10+git190818-1) ... Setting up libfontconfig1:arm64 (2.13.1-2ubuntu2) ... Setting up libarmadillo9 (1:9.600.5+dfsg-1) ... Setting up libjpeg8-dev:arm64 (8c-2ubuntu8) ... Setting up x11proto-fixes-dev (1:2018.4-4) ... Setting up libbluray2:arm64 (1:1.1.2-2) ... Setting up libsuperlu-dev:arm64 (5.2.1+dfsg1-4) ... Setting up x11proto-scrnsaver-dev (2018.4-4) ... Setting up libwacom2:arm64 (0.32-1) ... Setting up libsm6:arm64 (2:1.2.3-1) ... Setting up python (2.7.16-1) ... Setting up python-trie (0.2+ds-1) ... Setting up libfftw3-dev:arm64 (3.3.8-2) ... Setting up libopenmpt0:arm64 (0.4.6-1) ... Setting up libavahi-client3:arm64 (0.7-4ubuntu5) ... Setting up python-incremental (16.10.1-3) ... Setting up python-constantly (15.1.0-1) ... Setting up python-hyperlink (17.3.1-2) ... Setting up python-ipaddress (1.0.17-1) ... Setting up libtiffxx5:arm64 (4.0.10+git190818-1) ... Setting up libdrm-amdgpu1:arm64 (2.4.99-1) ... Setting up python-cffi-backend (1.12.3-1build1) ... Setting up libssh-gcrypt-4:arm64 (0.9.0-1) ... Setting up automake (1:1.16.1-4ubuntu3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libllvm8:arm64 (1:8.0.1-3build1) ... Setting up libkml-dev:arm64 (1.3.0-8) ... Setting up libxcb-dri3-0:arm64 (1.13.1-2) ... Setting up python-enum34 (1.1.6-2) ... Setting up cython (0.29.10-0ubuntu1) ... Setting up libibverbs1:arm64 (24.0-2) ... Setting up fontconfig (2.13.1-2ubuntu2) ... Regenerating fonts cache... done. Setting up libdrm-nouveau2:arm64 (2.4.99-1) ... Setting up libarpack2-dev:arm64 (3.7.0-2) ... Setting up gettext (0.19.8.1-9) ... Setting up libfontconfig1-dev:arm64 (2.13.1-2ubuntu2) ... Setting up libxdamage1:arm64 (1:1.1.5-1) ... Setting up libdrm-etnaviv1:arm64 (2.4.99-1) ... Setting up libxcb1-dev:arm64 (1.13.1-2) ... Setting up libxrender1:arm64 (1:0.9.10-1) ... Setting up gfortran-9 (9.2.1-8ubuntu1) ... Setting up libpmix2:arm64 (3.1.4-1) ... Setting up libgbm1:arm64 (19.1.6-1ubuntu1) ... Setting up ibverbs-providers:arm64 (24.0-2) ... Setting up python-cbor (1.0.0-1build2) ... Setting up libsm-dev:arm64 (2:1.2.3-1) ... Setting up libdrm-radeon1:arm64 (2.4.99-1) ... Setting up python-pkg-resources (41.1.0-1) ... Setting up openssh-client (1:8.0p1-6build1) ... Setting up libhx509-5-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libopenmpi3:arm64 (3.1.3-11build1) ... Setting up libpango-1.0-0:arm64 (1.42.4-7) ... Setting up libgl1-mesa-dri:arm64 (19.1.6-1ubuntu1) ... Setting up python-pyqrcode (1.2.1-2) ... Setting up libhdf5-cpp-103:arm64 (1.10.4+repack-10) ... Setting up libjpeg-dev:arm64 (8c-2ubuntu8) ... Setting up libx11-dev:arm64 (2:1.6.7-1) ... Setting up libxext6:arm64 (2:1.3.4-0ubuntu1) ... Setting up libxcb-dri3-dev:arm64 (1.13.1-2) ... Setting up python-asn1crypto (0.24.0-1) ... Setting up python-attr (18.2.0-1) ... Setting up man-db (2.8.7-3) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up gfortran (4:9.2.1-3.1ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:arm64 (1.16.0-4) ... Setting up libxxf86vm1:arm64 (1:1.1.4-1build1) ... Setting up libinput-bin (1.14.1-1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libpython-dev:arm64 (2.7.16-1) ... Setting up python-six (1.12.0-2) ... Setting up libnl-route-3-dev:arm64 (3.4.0-1) ... Setting up libltdl-dev:arm64 (2.4.6-11) ... Setting up libgeotiff2:arm64 (1.4.3-1) ... Setting up python-zope.interface (4.3.2-1build4) ... Setting up libegl-mesa0:arm64 (19.1.6-1ubuntu1) ... Setting up libxcb-dri2-0-dev:arm64 (1.13.1-2) ... Setting up libhdf5-openmpi-103:arm64 (1.10.4+repack-10) ... Setting up python-configparser (3.5.0b2-3) ... Setting up libtiff-dev:arm64 (4.0.10+git190818-1) ... Setting up python-wsaccel (0.6.2-1build2) ... Setting up python-pyasn1 (0.4.2-3) ... Setting up libxfixes3:arm64 (1:5.0.3-1) ... Setting up python-nacl (1.3.0-2) ... Setting up python-idna (2.6-2) ... Setting up libgdk-pixbuf2.0-0:arm64 (2.39.2-3) ... Setting up python-pyasn1-modules (0.2.1-0.2) ... Setting up libhdf5-dev (1.10.4+repack-10) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python-concurrent.futures (3.3.0-1) ... Setting up libdrm-freedreno1:arm64 (2.4.99-1) ... Setting up libxcb-render0-dev:arm64 (1.13.1-2) ... Setting up libxcb-glx0-dev:arm64 (1.13.1-2) ... Setting up libxt6:arm64 (1:1.1.5-1) ... Setting up libdrm-tegra0:arm64 (2.4.99-1) ... Setting up tcl-dev:arm64 (8.6.9+1) ... Setting up libxcb-shape0-dev:arm64 (1.13.1-2) ... Setting up libxext-dev:arm64 (2:1.3.4-0ubuntu1) ... Setting up libcups2:arm64 (2.2.12-2ubuntu1) ... Setting up libvdpau1:arm64 (1.2-1ubuntu1) ... Setting up libtheora0:arm64 (1.1.1+dfsg.1-15) ... Setting up libegl1:arm64 (1.1.1-0ubuntu1) ... Setting up libpoppler90:arm64 (0.80.0-0ubuntu1) ... Setting up libxcb-sync-dev:arm64 (1.13.1-2) ... Setting up python-twisted-bin:arm64 (18.9.0-3ubuntu1) ... Setting up libhwloc-dev:arm64 (1.11.13-1) ... Setting up libxcb-xfixes0-dev:arm64 (1.13.1-2) ... Setting up libxss1:arm64 (1:1.2.3-1) ... Setting up python-u-msgpack (2.1-1) ... Setting up libpangoft2-1.0-0:arm64 (1.42.4-7) ... Setting up python-snappy (0.5.3-1build1) ... Setting up python-future (0.16.0-1) ... update-alternatives: using /usr/bin/python2-futurize to provide /usr/bin/futurize (futurize) in auto mode update-alternatives: using /usr/bin/python2-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode Setting up python-ubjson (0.14.0-1) ... Setting up libva-x11-2:arm64 (2.5.0-1) ... Setting up libxrender-dev:arm64 (1:0.9.10-1) ... Setting up openmpi-bin (3.1.3-11build1) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libpangocairo-1.0-0:arm64 (1.42.4-7) ... Setting up libkrb5-26-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libpoppler-dev:arm64 (0.80.0-0ubuntu1) ... Setting up libinput10:arm64 (1.14.1-1) ... Setting up libx11-xcb-dev:arm64 (2:1.6.7-1) ... Setting up python-trollius (2.1~b1-5) ... Setting up libdrm-dev:arm64 (2.4.99-1) ... Setting up libxft2:arm64 (2.3.3-0ubuntu1) ... Setting up libglx-mesa0:arm64 (19.1.6-1ubuntu1) ... Setting up libglx0:arm64 (1.1.1-0ubuntu1) ... Setting up libgeotiff-dev:arm64 (1.4.3-1) ... Setting up po-debconf (1.0.21) ... Setting up python-automat (0.6.0-1) ... Setting up libxxf86vm-dev:arm64 (1:1.1.4-1build1) ... Setting up libtk8.6:arm64 (8.6.9-2) ... Setting up libpoppler-private-dev:arm64 (0.80.0-0ubuntu1) ... Setting up python-cryptography (2.6.1-3ubuntu1) ... Setting up mpi-default-bin (1.13) ... Setting up libibverbs-dev:arm64 (24.0-2) ... Setting up libxss-dev:arm64 (1:1.2.3-1) ... Setting up libheimntlm0-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libavutil56:arm64 (7:4.1.4-1build2) ... Setting up librsvg2-2:arm64 (2.44.14-1) ... Setting up libarmadillo-dev (1:9.600.5+dfsg-1) ... Setting up libxfixes-dev:arm64 (1:5.0.3-1) ... Setting up libgl1:arm64 (1.1.1-0ubuntu1) ... Setting up libtheora-dev:arm64 (1.1.1+dfsg.1-15) ... Setting up libgssapi3-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libxcb-randr0-dev:arm64 (1.13.1-2) ... Setting up libxt-dev:arm64 (1:1.1.5-1) ... Setting up libxcb-present-dev:arm64 (1.13.1-2) ... Setting up python-mpi4py (3.0.2-13) ... Setting up python-lz4 (1.1.0+dfsg-1build1) ... Setting up mesa-common-dev:arm64 (19.1.6-1ubuntu1) ... Setting up libswscale5:arm64 (7:4.1.4-1build2) ... Setting up libglu1-mesa:arm64 (9.0.1-0ubuntu1) ... Setting up libopenmpi-dev:arm64 (3.1.3-11build1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/aarch64-linux-gnu/mpi (mpi-aarch64-linux-gnu) in auto mode Setting up libhdf5-openmpi-dev (1.10.4+repack-10) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode Setting up python-openssl (19.0.0-1) ... Setting up python-service-identity (18.1.0-5) ... Setting up libxft-dev:arm64 (2.3.3-0ubuntu1) ... Setting up libxdamage-dev:arm64 (1:1.1.5-1) ... Setting up libavutil-dev:arm64 (7:4.1.4-1build2) ... Setting up tk8.6 (8.6.9-2) ... Setting up libqt5gui5:arm64 (5.12.4+dfsg-4build1) ... Setting up libldap-2.4-2:arm64 (2.4.48+dfsg-1ubuntu1) ... Setting up libglvnd-dev:arm64 (1.1.1-0ubuntu1) ... Setting up libcurl3-gnutls:arm64 (7.65.3-1ubuntu3) ... Setting up libqt5widgets5:arm64 (5.12.4+dfsg-4build1) ... Setting up libnetcdf13:arm64 (1:4.6.2-1build1) ... Setting up libswresample3:arm64 (7:4.1.4-1build2) ... Setting up libcurl4-gnutls-dev:arm64 (7.65.3-1ubuntu3) ... Setting up libnetcdf-c++4 (4.2-11) ... Setting up libgl2ps1.4 (1.4.0+dfsg1-2) ... Setting up libqt5printsupport5:arm64 (5.12.4+dfsg-4build1) ... Setting up libswscale-dev:arm64 (7:4.1.4-1build2) ... Setting up libnetcdf-dev (1:4.6.2-1build1) ... Setting up tk8.6-dev:arm64 (8.6.9-2) ... Setting up libqt5opengl5:arm64 (5.12.4+dfsg-4build1) ... Setting up mpi-default-dev (1.13) ... Setting up python-twisted-core (18.9.0-3ubuntu1) ... Setting up libdapclient6v5:arm64 (3.20.4-1) ... Setting up libgl1-mesa-dev:arm64 (19.1.6-1ubuntu1) ... Setting up libcurl4:arm64 (7.65.3-1ubuntu3) ... Setting up libavcodec58:arm64 (7:4.1.4-1build2) ... Setting up tk (8.6.9+1) ... Setting up libqt5quick5:arm64 (5.12.4-1) ... Setting up libdap-dev:arm64 (3.20.4-1) ... Setting up libchromaprint1:arm64 (1.4.3-3) ... Setting up python-twisted (18.9.0-3ubuntu1) ... Setting up libxerces-c3.2:arm64 (3.2.2+debian-1build1) ... Setting up libswresample-dev:arm64 (7:4.1.4-1build2) ... Setting up libavformat58:arm64 (7:4.1.4-1build2) ... Setting up libavcodec-dev:arm64 (7:4.1.4-1build2) ... Setting up libpq5:arm64 (11.5-1) ... Setting up libpq-dev (11.5-1) ... Setting up libavformat-dev:arm64 (7:4.1.4-1build2) ... Setting up libqt5webkit5:arm64 (5.212.0~alpha3-3) ... Setting up libnetcdf-cxx-legacy-dev (4.2-11) ... Setting up python-txaio (2.10.0-1) ... Setting up libgl2ps-dev (1.4.0+dfsg1-2) ... Setting up python-autobahn (17.10.1+dfsg1-5) ... Setting up tk-dev:arm64 (8.6.9+1) ... Setting up libxerces-c-dev (3.2.2+debian-1build1) ... Setting up libhdf5-mpi-dev (1.10.4+repack-10) ... Setting up libhdf4-alt-dev (4.2.14-1) ... Setting up libglu1-mesa-dev:arm64 (9.0.1-0ubuntu1) ... Setting up cmake (3.13.4-1build1) ... Setting up odbcinst (2.3.6-0.1build1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.6.0-1) ... Setting up odbcinst1debian2:arm64 (2.3.6-0.1build1) ... Setting up libgdal20 (2.4.2+dfsg-1build2) ... Setting up unixodbc-dev:arm64 (2.3.6-0.1build1) ... Setting up libvtk6.3 (6.3.0+dfsg2-2build7) ... Setting up debhelper (12.4ubuntu1) ... Setting up libvtk6.3-qt (6.3.0+dfsg2-2build7) ... Setting up tcl-vtk6 (6.3.0+dfsg2-2build7) ... Setting up libgdal-dev (2.4.2+dfsg-1build2) ... Setting up python-vtk6 (6.3.0+dfsg2-2build7) ... Setting up vtk6 (6.3.0+dfsg2-2build7) ... Setting up libvtk6-jni (6.3.0+dfsg2-2build7) ... Setting up libvtk6-java (6.3.0+dfsg2-2build7) ... Setting up libvtk6-dev (6.3.0+dfsg2-2build7) ... Setting up sbuild-build-depends-lammps-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.30-0ubuntu1) ... Processing triggers for systemd (241-7ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-161-generic arm64 (aarch64) Toolchain package versions: binutils_2.32.51.20190905-0ubuntu1 dpkg-dev_1.19.7ubuntu2 g++-9_9.2.1-8ubuntu1 gcc-9_9.2.1-8ubuntu1 libc6-dev_2.30-0ubuntu1 libstdc++-9-dev_9.2.1-8ubuntu1 libstdc++6_9.2.1-8ubuntu1 linux-libc-dev_5.3.0-10.11 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.3 autoconf_2.69-11 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.2ubuntu6 base-passwd_3.5.46 bash_5.0-4ubuntu1 binutils_2.32.51.20190905-0ubuntu1 binutils-aarch64-linux-gnu_2.32.51.20190905-0ubuntu1 binutils-common_2.32.51.20190905-0ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.34-0.1ubuntu2 build-essential_12.7ubuntu1 bzip2_1.0.6-9.2 ca-certificates_20190110 cmake_3.13.4-1build1 cmake-data_3.13.4-1build1 coreutils_8.30-3ubuntu2 cpp_4:9.2.1-3.1ubuntu1 cpp-9_9.2.1-8ubuntu1 cython_0.29.10-0ubuntu1 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.4ubuntu1 debianutils_4.8.6.3 default-libmysqlclient-dev_1.0.5ubuntu2 dh-autoreconf_19 dh-strip-nondeterminism_1.6.0-1 diffutils_1:3.7-3 dpkg_1.19.7ubuntu2 dpkg-dev_1.19.7ubuntu2 dwz_0.13-1 e2fsprogs_1.45.3-4ubuntu1 fakeroot_1.23-1 fdisk_2.34-0.1ubuntu2 file_1:5.37-5 findutils_4.6.0+git+20190209-2ubuntu1 fontconfig_2.13.1-2ubuntu2 fontconfig-config_2.13.1-2ubuntu2 fonts-dejavu-core_2.37-1 g++_4:9.2.1-3.1ubuntu1 g++-9_9.2.1-8ubuntu1 gcc_4:9.2.1-3.1ubuntu1 gcc-9_9.2.1-8ubuntu1 gcc-9-base_9.2.1-8ubuntu1 gdal-data_2.4.2+dfsg-1build2 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gfortran_4:9.2.1-3.1ubuntu1 gfortran-9_9.2.1-8ubuntu1 gpg_2.2.12-1ubuntu3 gpg-agent_2.2.12-1ubuntu3 gpgconf_2.2.12-1ubuntu3 gpgv_2.2.12-1ubuntu3 grep_3.3-1 groff-base_1.22.4-3 gzip_1.10-0ubuntu3 hdf5-helpers_1.10.4+repack-10 hostname_3.22 ibverbs-providers_24.0-2 icu-devtools_63.2-2 init_1.57 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 iso-codes_4.3-1 libacl1_2.2.53-4 libaec-dev_1.0.4-1 libaec0_1.0.4-1 libaom0_1.0.0-3 libapparmor1_2.13.3-5ubuntu1 libapt-pkg5.90_1.9.3 libarchive-zip-perl_1.65-1 libarchive13_3.3.3-4 libargon2-1_0~20171227-0.2 libarmadillo-dev_1:9.600.5+dfsg-1 libarmadillo9_1:9.600.5+dfsg-1 libarpack2_3.7.0-2 libarpack2-dev_3.7.0-2 libasan5_9.2.1-8ubuntu1 libasn1-8-heimdal_7.5.0+dfsg-3build1 libassuan0_2.5.3-7ubuntu1 libatomic1_9.2.1-8ubuntu1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.5-2ubuntu1 libaudit1_1:2.8.5-2ubuntu1 libavahi-client3_0.7-4ubuntu5 libavahi-common-data_0.7-4ubuntu5 libavahi-common3_0.7-4ubuntu5 libavcodec-dev_7:4.1.4-1build2 libavcodec58_7:4.1.4-1build2 libavformat-dev_7:4.1.4-1build2 libavformat58_7:4.1.4-1build2 libavutil-dev_7:4.1.4-1build2 libavutil56_7:4.1.4-1build2 libbinutils_2.32.51.20190905-0ubuntu1 libblas-dev_3.8.0-2 libblas3_3.8.0-2 libblkid1_2.34-0.1ubuntu2 libbluray2_1:1.1.2-2 libboost-dev_1.67.0.2 libboost1.67-dev_1.67.0-13ubuntu1 libbrotli1_1.0.7-2 libbsd0_0.10.0-1 libbz2-1.0_1.0.6-9.2 libc-bin_2.30-0ubuntu1 libc-dev-bin_2.30-0ubuntu1 libc6_2.30-0ubuntu1 libc6-dev_2.30-0ubuntu1 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2 libcap2_1:2.25-2 libcap2-bin_1:2.25-2 libcc1-0_9.2.1-8ubuntu1 libcharls-dev_2.0.0+dfsg-1 libcharls2_2.0.0+dfsg-1 libchromaprint1_1.4.3-3 libcodec2-0.8.1_0.8.1-2 libcom-err2_1.45.3-4ubuntu1 libcroco3_0.6.13-1 libcryptsetup12_2:2.2.0-3ubuntu1 libcups2_2.2.12-2ubuntu1 libcurl3-gnutls_7.65.3-1ubuntu3 libcurl4_7.65.3-1ubuntu3 libcurl4-gnutls-dev_7.65.3-1ubuntu3 libdap-dev_3.20.4-1 libdap25_3.20.4-1 libdapclient6v5_3.20.4-1 libdapserver7v5_3.20.4-1 libdatrie1_0.2.12-3 libdb5.3_5.3.28+dfsg1-0.6ubuntu1 libdbus-1-3_1.12.14-1ubuntu2 libdebconfclient0_0.249ubuntu1 libdevmapper1.02.1_2:1.02.155-2ubuntu6 libdouble-conversion3_3.1.5-2 libdpkg-perl_1.19.7ubuntu2 libdrm-amdgpu1_2.4.99-1 libdrm-common_2.4.99-1 libdrm-dev_2.4.99-1 libdrm-etnaviv1_2.4.99-1 libdrm-freedreno1_2.4.99-1 libdrm-nouveau2_2.4.99-1 libdrm-radeon1_2.4.99-1 libdrm-tegra0_2.4.99-1 libdrm2_2.4.99-1 libedit2_3.1-20190324-1 libegl-mesa0_19.1.6-1ubuntu1 libegl1_1.1.1-0ubuntu1 libeigen3-dev_3.3.7-1 libelf1_0.176-1.1 libepsilon-dev_0.9.2+dfsg-4 libepsilon1_0.9.2+dfsg-4 libevdev2_1.8.0+dfsg-2 libevent-2.1-6_2.1.8-stable-4build1 libevent-core-2.1-6_2.1.8-stable-4build1 libevent-pthreads-2.1-6_2.1.8-stable-4build1 libexpat1_2.2.7-2 libexpat1-dev_2.2.7-2 libext2fs2_1.45.3-4ubuntu1 libfakeroot_1.23-1 libfdisk1_2.34-0.1ubuntu2 libffi6_3.2.1-9 libfftw3-bin_3.3.8-2 libfftw3-dev_3.3.8-2 libfftw3-double3_3.3.8-2 libfftw3-long3_3.3.8-2 libfftw3-single3_3.3.8-2 libfile-stripnondeterminism-perl_1.6.0-1 libfontconfig1_2.13.1-2ubuntu2 libfontconfig1-dev_2.13.1-2ubuntu2 libfreetype6_2.9.1-4 libfreetype6-dev_2.9.1-4 libfreexl-dev_1.0.5-3 libfreexl1_1.0.5-3 libfribidi0_1.0.5-3.1 libfyba-dev_4.1.1-6 libfyba0_4.1.1-6 libgbm1_19.1.6-1ubuntu1 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python-ipaddress_1.0.17-1 python-lz4_1.1.0+dfsg-1build1 python-minimal_2.7.16-1 python-mpi4py_3.0.2-13 python-nacl_1.3.0-2 python-openssl_19.0.0-1 python-pkg-resources_41.1.0-1 python-pyasn1_0.4.2-3 python-pyasn1-modules_0.2.1-0.2 python-pyqrcode_1.2.1-2 python-service-identity_18.1.0-5 python-six_1.12.0-2 python-snappy_0.5.3-1build1 python-trie_0.2+ds-1 python-trollius_2.1~b1-5 python-twisted_18.9.0-3ubuntu1 python-twisted-bin_18.9.0-3ubuntu1 python-twisted-core_18.9.0-3ubuntu1 python-txaio_2.10.0-1 python-u-msgpack_2.1-1 python-ubjson_0.14.0-1 python-vtk6_6.3.0+dfsg2-2build7 python-wsaccel_0.6.2-1build2 python-zope.interface_4.3.2-1build4 python2_2.7.16-1 python2-minimal_2.7.16-1 python2.7_2.7.16-4 python2.7-minimal_2.7.16-4 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-lammps-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 shared-mime-info_1.10-1 systemd_241-7ubuntu1 systemd-sysv_241-7ubuntu1 sysvinit-utils_2.95-5ubuntu2 tar_1.30+dfsg-6 tcl_8.6.9+1 tcl-dev_8.6.9+1 tcl-vtk6_6.3.0+dfsg2-2build7 tcl8.6_8.6.9+dfsg-2 tcl8.6-dev_8.6.9+dfsg-2 tk_8.6.9+1 tk-dev_8.6.9+1 tk8.6_8.6.9-2 tk8.6-dev_8.6.9-2 tzdata_2019b-2 ubuntu-keyring_2018.09.18.1 ucf_3.0038+nmu1 unixodbc-dev_2.3.6-0.1build1 util-linux_2.34-0.1ubuntu2 uuid-dev_2.34-0.1ubuntu2 voro++-dev_0.4.6+dfsg1-3 vtk6_6.3.0+dfsg2-2build7 x11-common_1:7.7+19ubuntu12 x11proto-core-dev_2018.4-4 x11proto-damage-dev_1:2018.4-4 x11proto-dev_2018.4-4 x11proto-fixes-dev_1:2018.4-4 x11proto-scrnsaver-dev_2018.4-4 x11proto-xext-dev_2018.4-4 x11proto-xf86vidmode-dev_2018.4-4 xkb-data_2.26-2ubuntu1 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1build1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu3 zlib1g-dev_1:1.2.11.dfsg-1ubuntu3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Fri Mar 8 06:59:52 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./lammps_0~20181211.gitad1b1897d+dfsg1-2.dsc dpkg-source: info: extracting lammps in lammps-0~20181211.gitad1b1897d+dfsg1 dpkg-source: info: unpacking lammps_0~20181211.gitad1b1897d+dfsg1.orig.tar.xz dpkg-source: info: unpacking lammps_0~20181211.gitad1b1897d+dfsg1-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 10_enable_spglib.patch dpkg-source: info: applying 20_set_potentials_path.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-17091121 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-17091121 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-17091121 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package lammps dpkg-buildpackage: info: source version 0~20181211.gitad1b1897d+dfsg1-2 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --sourcedirectory=cmake --builddirectory=/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build debian/rules override_dh_auto_clean make[1]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1' dh_auto_clean rm -rf /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build make[1]: Leaving directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1' dh_autoreconf_clean -O--sourcedirectory=cmake -O--builddirectory=/<>/lammps-0\~20181211.gitad1b1897d\+dfsg1/debian/build dh_clean -O--sourcedirectory=cmake -O--builddirectory=/<>/lammps-0\~20181211.gitad1b1897d\+dfsg1/debian/build debian/rules build-arch dh build-arch --sourcedirectory=cmake --builddirectory=/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build dh_update_autotools_config -a -O--sourcedirectory=cmake -O--builddirectory=/<>/lammps-0\~20181211.gitad1b1897d\+dfsg1/debian/build dh_autoreconf -a -O--sourcedirectory=cmake -O--builddirectory=/<>/lammps-0\~20181211.gitad1b1897d\+dfsg1/debian/build debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1' dh_auto_configure -- \ -DPKG_ASPHERE=ON \ -DPKG_BODY=ON \ -DPKG_CLASS2=ON \ -DPKG_COLLOID=ON \ -DPKG_COMPRESS=ON \ -DPKG_CORESHELL=ON \ -DPKG_DIPOLE=ON \ -DPKG_GPU=ON \ -DPKG_GRANULAR=ON \ -DPKG_KIM=OFF \ -DPKG_KSPACE=ON \ -DPKG_MANYBODY=ON \ -DPKG_MC=ON \ -DPKG_MEAM=ON \ -DPKG_MISC=ON \ -DPKG_MOLECULE=ON \ -DPKG_MPIIO=ON \ -DPKG_OPT=ON \ -DPKG_PERI=ON \ -DPKG_POEMS=ON \ -DPKG_PYTHON=ON \ -DPKG_QEQ=ON \ -DPKG_REAX=OFF \ -DPKG_REPLICA=ON \ -DPKG_RIGID=ON \ -DPKG_SHOCK=ON \ -DPKG_SNAP=ON \ -DPKG_SRD=ON \ -DPKG_USER-ATC=ON \ -DPKG_USER-AWPMD=ON \ -DPKG_USER-BOCS=ON \ -DPKG_USER-CGDNA=ON \ -DPKG_USER-CGSDK=ON \ -DPKG_USER-DIFFRACTION=ON \ -DPKG_USER-DPD=ON \ -DPKG_USER-DRUDE=ON \ -DPKG_USER-EFF=ON \ -DPKG_USER-FEP=ON \ -DPKG_USER-H5MD=ON \ -DPKG_USER-LB=ON \ -DPKG_USER-MANIFOLD=ON \ -DPKG_USER-MEAMC=ON \ -DPKG_USER-MESO=ON \ -DPKG_USER-MGPT=ON \ -DPKG_USER-MISC=ON \ -DPKG_USER-MOFFF=ON \ -DPKG_USER-MOLFILE=ON \ -DPKG_USER-NETCDF=ON \ -DPKG_USER-OMP=ON \ -DPKG_USER-PHONON=ON \ -DPKG_USER-QTB=ON \ -DPKG_USER-REAXC=OFF \ -DPKG_USER-SMD=ON \ -DPKG_USER-SMTBQ=ON \ -DPKG_USER-SPH=ON \ -DPKG_USER-TALLY=ON \ -DPKG_USER-UEF=ON \ -DPKG_USER-VTK=ON \ -DPKG_VORONOI=ON cd debian/build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DPKG_ASPHERE=ON -DPKG_BODY=ON -DPKG_CLASS2=ON -DPKG_COLLOID=ON -DPKG_COMPRESS=ON -DPKG_CORESHELL=ON -DPKG_DIPOLE=ON -DPKG_GPU=ON -DPKG_GRANULAR=ON -DPKG_KIM=OFF -DPKG_KSPACE=ON -DPKG_MANYBODY=ON -DPKG_MC=ON -DPKG_MEAM=ON -DPKG_MISC=ON -DPKG_MOLECULE=ON -DPKG_MPIIO=ON -DPKG_OPT=ON -DPKG_PERI=ON -DPKG_POEMS=ON -DPKG_PYTHON=ON -DPKG_QEQ=ON -DPKG_REAX=OFF -DPKG_REPLICA=ON -DPKG_RIGID=ON -DPKG_SHOCK=ON -DPKG_SNAP=ON -DPKG_SRD=ON -DPKG_USER-ATC=ON -DPKG_USER-AWPMD=ON -DPKG_USER-BOCS=ON -DPKG_USER-CGDNA=ON -DPKG_USER-CGSDK=ON -DPKG_USER-DIFFRACTION=ON -DPKG_USER-DPD=ON -DPKG_USER-DRUDE=ON -DPKG_USER-EFF=ON -DPKG_USER-FEP=ON -DPKG_USER-H5MD=ON -DPKG_USER-LB=ON -DPKG_USER-MANIFOLD=ON -DPKG_USER-MEAMC=ON -DPKG_USER-MESO=ON -DPKG_USER-MGPT=ON -DPKG_USER-MISC=ON -DPKG_USER-MOFFF=ON -DPKG_USER-MOLFILE=ON -DPKG_USER-NETCDF=ON -DPKG_USER-OMP=ON -DPKG_USER-PHONON=ON -DPKG_USER-QTB=ON -DPKG_USER-REAXC=OFF -DPKG_USER-SMD=ON -DPKG_USER-SMTBQ=ON -DPKG_USER-SPH=ON -DPKG_USER-TALLY=ON -DPKG_USER-UEF=ON -DPKG_USER-VTK=ON -DPKG_VORONOI=ON ../../cmake -- The CXX compiler identification is GNU 9.2.1 -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Running check for auto-generated files from make-based build system -- The Fortran compiler identification is GNU 9.2.1 -- Check for working Fortran compiler: /usr/bin/gfortran -- Check for working Fortran compiler: /usr/bin/gfortran -- works -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Checking whether /usr/bin/gfortran supports Fortran 90 -- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes -- The C compiler identification is GNU 9.2.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Found MPI_C: /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi_cxx.so (found version "3.1") -- Found MPI_Fortran: /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi_usempif08.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP_Fortran: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.1") -- Checking for module 'fftw3' -- Found fftw3, version 3.3.8 -- Found FFTW3: /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for Fortran sgemm -- Looking for Fortran sgemm - not found -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - found -- Found Threads: TRUE -- Looking for Fortran sgemm -- Looking for Fortran sgemm - found -- Found BLAS: /usr/lib/aarch64-linux-gnu/libblas.so -- Looking for Fortran cheev -- Looking for Fortran cheev - found -- A library with LAPACK API found. -- Found PythonInterp: /usr/bin/python (found version "2.7.16") -- Found PythonLibs: /usr/lib/aarch64-linux-gnu/libpython2.7.so (found version "2.7.16+") -- Found JPEG: /usr/lib/aarch64-linux-gnu/libjpeg.so (found version "80") -- Found PNG: /usr/lib/aarch64-linux-gnu/libpng.so (found version "1.6.37") -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.2.11") -- Found GZIP: /bin/gzip -- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) -- Found VORO: /usr/lib/aarch64-linux-gnu/libvoro++.so -- Found NetCDF: /usr/lib/aarch64-linux-gnu/libnetcdf.so -- The imported target "vtkRenderingPythonTkWidgets" references the file "/usr/lib/aarch64-linux-gnu/libvtkRenderingPythonTkWidgets.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake" but not all the files it references. -- The imported target "vtk" references the file "/usr/bin/vtk" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake" but not all the files it references. -- Looking for C++ include math.h -- Looking for C++ include math.h - found -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/aarch64-linux-gnu/libpthread.so;/usr/lib/aarch64-linux-gnu/libsz.so;/usr/lib/aarch64-linux-gnu/libz.so;/usr/lib/aarch64-linux-gnu/libdl.so;/usr/lib/aarch64-linux-gnu/libm.so (found version "1.10.4") -- Looking for CL_VERSION_2_2 -- Looking for CL_VERSION_2_2 - found -- Found OpenCL: /usr/lib/aarch64-linux-gnu/libOpenCL.so (found version "2.2") Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/atom_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/beck_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/born_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/born_coul_long_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/born_coul_long_cs_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/born_coul_wolf_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/born_coul_wolf_cs_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/buck_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/buck_coul_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/buck_coul_long_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/charmm_long_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/colloid_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/coul_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/coul_debye_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/coul_dsf_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/coul_long_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/coul_long_cs_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/device_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/dipole_lj_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/dipole_lj_sf_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/dipole_long_lj_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/dpd_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/eam_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/ellipsoid_nbor_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/gauss_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj96_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_class2_long_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_coul_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_coul_debye_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_coul_long_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_coul_msm_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_cubic_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_dsf_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_expand_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_expand_coul_long_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_gromacs_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_sdk_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_sdk_long_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/mie_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/morse_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/neighbor_cpu_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/neighbor_gpu_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/pppm_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/re_squared_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/re_squared_lj_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/soft_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/sw_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/table_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/tersoff_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/tersoff_mod_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/tersoff_zbl_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/ufm_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/vashishta_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/yukawa_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/yukawa_colloid_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/zbl_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/gayberne_cl.h... Creating /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/gayberne_lj_cl.h... -- Generating style_angle.h... -- Generating style_atom.h... -- Generating style_body.h... -- Generating style_bond.h... -- Generating style_command.h... -- Generating style_compute.h... -- Generating style_dihedral.h... -- Generating style_dump.h... -- Generating style_fix.h... -- Generating style_improper.h... -- Generating style_integrate.h... -- Generating style_kspace.h... -- Generating style_minimize.h... -- Generating style_nbin.h... -- Generating style_npair.h... -- Generating style_nstencil.h... -- Generating style_ntopo.h... -- Generating style_pair.h... -- Generating style_reader.h... -- Generating style_region.h... -- Generating lmpinstalledpkgs.h... -- Building package: ASPHERE -- Building package: BODY -- Building package: CLASS2 -- Building package: COLLOID -- Building package: COMPRESS -- Building package: DIPOLE -- Building package: GRANULAR -- Building package: KSPACE -- Building package: MANYBODY -- Building package: MC -- Building package: MEAM -- Building package: MISC -- Building package: MOLECULE -- Building package: PERI -- Building package: REPLICA -- Building package: RIGID -- Building package: SHOCK -- Building package: SNAP -- Building package: SRD -- Building package: PYTHON -- Building package: MPIIO -- Building package: VORONOI -- Building package: POEMS -- Building package: USER-ATC -- Building package: USER-AWPMD -- Building package: USER-BOCS -- Building package: USER-CGDNA -- Building package: USER-MESO -- Building package: USER-CGSDK -- Building package: USER-DIFFRACTION -- Building package: USER-DPD -- Building package: USER-DRUDE -- Building package: USER-EFF -- Building package: USER-FEP -- Building package: USER-H5MD -- Building package: USER-LB -- Building package: USER-MANIFOLD -- Building package: USER-MEAMC -- Building package: USER-MGPT -- Building package: USER-MISC -- Building package: USER-MOFFF -- Building package: USER-MOLFILE -- Building package: USER-NETCDF -- Building package: USER-PHONON -- Building package: USER-QTB -- Building package: USER-SMD -- Building package: USER-SMTBQ -- Building package: USER-SPH -- Building package: USER-TALLY -- Building package: USER-UEF -- Building package: USER-VTK -- Building package: USER-OMP -- Building package: OPT -- Building package: GPU -- Building package: CORESHELL -- Building package: QEQ -- The following packages have been found: * MPI * OpenMP * PkgConfig * FFTW3 * LAPACK * Threads * BLAS * PythonInterp * PythonLibs * JPEG * PNG * VORO * NetCDF * Eigen3 * VTK * ZLIB * HDF5 * OpenCL -- <<< Build configuration >>> Build type None Install path /usr Compilers and Flags: C++ Compiler /usr/bin/c++ Type GNU Version 9.2.1 C++ Flags -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp Defines LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;FFT_FFTW;LMP_PYTHON;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP;LMP_HAS_NETCDF;NC_64BIT_DATA=0x0020;vtkFiltersFlowPaths_AUTOINIT=1(vtkFiltersParallelFlowPaths);vtkIOExodus_AUTOINIT=1(vtkIOParallelExodus);vtkIOGeometry_AUTOINIT=1(vtkIOMPIParallel);vtkIOImage_AUTOINIT=1(vtkIOMPIImage);vtkIOParallel_AUTOINIT=1(vtkIOMPIParallel);vtkIOSQL_AUTOINIT=2(vtkIOMySQL,vtkIOPostgreSQL);vtkRenderingContext2D_AUTOINIT=1(vtkRenderingContextOpenGL);vtkRenderingCore_AUTOINIT=3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL);vtkRenderingFreeType_AUTOINIT=2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib);vtkRenderingLIC_AUTOINIT=1(vtkRenderingParallelLIC);vtkRenderingVolume_AUTOINIT=1(vtkRenderingVolumeOpenGL);LAMMPS_VTK;LMP_MPIIO;LMP_USER_OMP -- Fortran Compiler /usr/bin/gfortran Type GNU Version 9.2.1 Fortran Flags -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -- C Compiler /usr/bin/cc Type GNU Version 9.2.1 C Flags -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -- Linker flags: Executable -Wl,-Bsymbolic-functions -Wl,-z,relro -- Static libraries -- Link libraries: /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi_cxx.so;/usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so;/usr/lib/aarch64-linux-gnu/libfftw3.so;/usr/lib/aarch64-linux-gnu/libpython2.7.so;/usr/lib/aarch64-linux-gnu/libjpeg.so;/usr/lib/aarch64-linux-gnu/libpng.so;/usr/lib/aarch64-linux-gnu/libz.so;/usr/lib/aarch64-linux-gnu/libvoro++.so;molfile;/usr/lib/aarch64-linux-gnu/libnetcdf.so;vtkChartsCore;vtkCommonColor;vtkCommonDataModel;vtkCommonMath;vtkCommonCore;vtksys;vtkCommonMisc;vtkCommonSystem;vtkCommonTransforms;vtkInfovisCore;vtkFiltersExtraction;vtkCommonExecutionModel;vtkFiltersCore;vtkFiltersGeneral;vtkCommonComputationalGeometry;vtkFiltersStatistics;vtkImagingFourier;vtkImagingCore;vtkalglib;vtkRenderingContext2D;vtkRenderingCore;vtkFiltersGeometry;vtkFiltersSources;vtkRenderingFreeType;/usr/lib/aarch64-linux-gnu/libfreetype.so;vtkftgl;vtkDICOMParser;vtkDomainsChemistry;vtkIOXML;vtkIOGeometry;vtkIOCore;vtkIOXMLParser;/usr/lib/aarch64-linux-gnu/libexpat.so;vtkFiltersAMR;vtkParallelCore;vtkIOLegacy;vtkFiltersFlowPaths;vtkFiltersGeneric;vtkFiltersHybrid;vtkImagingSources;vtkFiltersHyperTree;vtkFiltersImaging;vtkImagingGeneral;vtkFiltersModeling;vtkFiltersParallel;vtkFiltersParallelFlowPaths;vtkParallelMPI;vtkFiltersParallelGeometry;vtkFiltersParallelImaging;vtkFiltersParallelMPI;vtkFiltersParallelStatistics;vtkFiltersProgrammable;vtkFiltersPython;vtkWrappingPythonCore;vtkWrappingTools;vtkFiltersReebGraph;vtkFiltersSMP;vtkFiltersSelection;vtkFiltersTexture;vtkFiltersVerdict;verdict;vtkGeovisCore;vtkInfovisLayout;vtkImagingHybrid;vtkIOImage;vtkmetaio;/usr/lib/aarch64-linux-gnu/libtiff.so;vtkInfovisBoostGraphAlgorithms;vtkInteractionStyle;vtkInteractionWidgets;vtkRenderingAnnotation;vtkImagingColor;vtkRenderingVolume;vtkViewsCore;/usr/lib/aarch64-linux-gnu/libproj.so;vtkIOAMR;/usr/lib/aarch64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/aarch64-linux-gnu/libsz.so;/usr/lib/aarch64-linux-gnu/libdl.so;/usr/lib/aarch64-linux-gnu/libm.so;vtkIOEnSight;vtkIOExodus;vtkexoIIc;/usr/lib/aarch64-linux-gnu/libnetcdf_c++.so;vtkIOExport;vtkRenderingGL2PS;vtkRenderingContextOpenGL;vtkRenderingOpenGL;/usr/lib/aarch64-linux-gnu/libgl2ps.so;vtkRenderingLabel;vtkIOFFMPEG;vtkIOMovie;/usr/lib/aarch64-linux-gnu/libtheoraenc.so;/usr/lib/aarch64-linux-gnu/libtheoradec.so;/usr/lib/aarch64-linux-gnu/libogg.so;vtkIOGDAL;vtkIOGeoJSON;vtkIOImport;vtkIOInfovis;/usr/lib/aarch64-linux-gnu/libxml2.so;vtkIOLSDyna;vtkIOMINC;vtkIOMPIImage;vtkIOMPIParallel;vtkIOParallel;vtkIONetCDF;/usr/lib/aarch64-linux-gnu/libjsoncpp.so;vtkIOMySQL;vtkIOSQL;sqlite3;vtkIOODBC;vtkIOPLY;vtkIOParallelExodus;vtkIOParallelLSDyna;vtkIOParallelNetCDF;vtkIOParallelXML;vtkIOPostgreSQL;vtkIOVPIC;VPIC;vtkIOVideo;vtkIOXdmf2;vtkxdmf2;vtkImagingMath;vtkImagingMorphological;vtkImagingStatistics;vtkImagingStencil;vtkInteractionImage;vtkLocalExample;vtkParallelMPI4Py;vtkPythonInterpreter;vtkRenderingExternal;vtkRenderingFreeTypeFontConfig;vtkRenderingImage;vtkRenderingLIC;vtkRenderingLOD;vtkRenderingMatplotlib;vtkRenderingParallel;vtkRenderingParallelLIC;vtkRenderingVolumeAMR;vtkRenderingVolumeOpenGL;vtkTestingGenericBridge;vtkTestingIOSQL;vtkTestingRendering;vtkViewsContext2D;vtkViewsGeovis;vtkViewsInfovis;vtkWrappingJava;m;meam;poems;atc;awpmd;h5md;gpu;gfortran;gcc_s;gcc;c -- Using mpi with headers in /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi;/usr/lib/aarch64-linux-gnu/openmpi/include and /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi_cxx.so;/usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -- GPU Api: OPENCL -- OCL Tune: GENERIC -- GPU Precision: MIXED -- Using FFTW3 as FFT -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY -- Build files have been written to: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build make[1]: Leaving directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1' dh_auto_build -a -O--sourcedirectory=cmake -O--builddirectory=/<>/lammps-0\~20181211.gitad1b1897d\+dfsg1/debian/build cd debian/build && make -j4 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' /usr/bin/cmake -S"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" -B"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/progress.marks" make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/depend make -f CMakeFiles/meam.dir/build.make CMakeFiles/meam.dir/depend make -f CMakeFiles/awpmd.dir/build.make CMakeFiles/awpmd.dir/depend make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/depend make[3]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' cd "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/meam.dir/DependInfo.cmake" --color= make[3]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' cd "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/awpmd.dir/DependInfo.cmake" --color= make[3]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' cd "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/poems.dir/DependInfo.cmake" --color= make[3]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' cd "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/h5md.dir/DependInfo.cmake" --color= Scanning dependencies of target meam make[3]: Leaving directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' make -f CMakeFiles/meam.dir/build.make CMakeFiles/meam.dir/build make[3]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' Scanning dependencies of target h5md make[3]: Leaving directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/build make[3]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' [ 0%] Building Fortran object CMakeFiles/meam.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_data.F.o /usr/bin/gfortran -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_data.F" -o "CMakeFiles/meam.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_data.F.o" Scanning dependencies of target awpmd make[3]: Leaving directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' make -f CMakeFiles/awpmd.dir/build.make CMakeFiles/awpmd.dir/build make[3]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' [ 0%] Building C object CMakeFiles/h5md.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/src/ch5md.c.o Scanning dependencies of target poems make[3]: Leaving directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' make -f 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directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' cd "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/atc.dir/DependInfo.cmake" --color= [ 0%] Building Fortran object CMakeFiles/meam.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_dens_init.F.o /usr/bin/gfortran -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_force.F" -o "CMakeFiles/meam.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_force.F.o" [ 0%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/body23joint.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" 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-fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/body23joint.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/body23joint.cpp" Scanning dependencies of target atc make[3]: Leaving directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build make[3]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' [ 0%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_setup_global.F" -o "CMakeFiles/meam.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_setup_global.F.o" [ 1%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/colmatrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/colmatrix.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/colmatrix.cpp" [ 1%] Building Fortran object CMakeFiles/meam.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_setup_param.F.o /usr/bin/gfortran -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_setup_param.F" -o "CMakeFiles/meam.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_setup_param.F.o" [ 1%] Linking Fortran static library libmeam.a /usr/bin/cmake -P CMakeFiles/meam.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/meam.dir/link.txt --verbose=1 /usr/bin/ar qc libmeam.a 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CMakeFiles/ocl_get_devices.dir/depend make[3]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' cd "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake" --color= Scanning dependencies of target ocl_get_devices make[3]: Leaving directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build make[3]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' [ 1%] Building CXX object CMakeFiles/ocl_get_devices.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp.o 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/ocl_get_devices.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp" [ 1%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/eulerparameters.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/eulerparameters.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/eulerparameters.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_device.h:35, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp:25: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 1%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/fastmatrixops.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/fastmatrixops.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/fastmatrixops.cpp" [ 1%] Linking CXX executable ocl_get_devices /usr/bin/cmake -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic "CMakeFiles/ocl_get_devices.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp.o" -o ocl_get_devices -lOpenCL make[3]: Leaving directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' [ 1%] Built target ocl_get_devices make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend make[3]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' cd "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/gpu.dir/DependInfo.cmake" --color= [ 1%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/fixedpoint.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/fixedpoint.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/fixedpoint.cpp" Scanning dependencies of target gpu make[3]: Leaving directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build make[3]: Entering directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' [ 1%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_answer.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_answer.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_answer.cpp" [ 1%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/freebodyjoint.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/freebodyjoint.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/freebodyjoint.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_answer.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_answer.cpp:16: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 1%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/inertialframe.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/inertialframe.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/inertialframe.cpp" [ 2%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/joint.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/joint.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/joint.cpp" [ 2%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat3x3.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.cpp" [ 2%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat4x4.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat4x4.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat4x4.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.cpp:16: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 2%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat6x6.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat6x6.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat6x6.cpp" [ 2%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/matrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/matrix.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/matrix.cpp" [ 2%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/matrixfun.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/matrixfun.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/matrixfun.cpp" [ 2%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.cpp" [ 2%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mixedjoint.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mixedjoint.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mixedjoint.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.cpp:16: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 2%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/norm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" 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-fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/norm.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/norm.cpp" [ 2%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onbody.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onbody.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onbody.cpp" [ 2%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onfunctions.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onfunctions.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onfunctions.cpp" [ 2%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onsolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.cpp" [ 2%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/poemsobject.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/poemsobject.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/poemsobject.cpp" [ 2%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/poemstreenode.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/poemstreenode.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/poemstreenode.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.cpp:17: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 2%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/point.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/point.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/point.cpp" [ 3%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/prismaticjoint.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/prismaticjoint.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/prismaticjoint.cpp" [ 3%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/revolutejoint.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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-fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/solver.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/solver.cpp" [ 3%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.cpp" [ 3%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/sphericaljoint.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/sphericaljoint.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/sphericaljoint.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.cpp:17: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 3%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/system.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/system.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/system.cpp" [ 3%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingEnergy.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingEnergy.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingEnergy.cpp" [ 3%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/vect3.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/vect6.cpp" [ 3%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualcolmatrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualcolmatrix.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualcolmatrix.cpp" [ 3%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dpd.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dpd.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dpd.cpp" [ 3%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualmatrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualmatrix.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualmatrix.cpp" [ 4%] Linking CXX static library libawpmd.a /usr/bin/cmake -P CMakeFiles/awpmd.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/awpmd.dir/link.txt --verbose=1 /usr/bin/ar qc libawpmd.a "CMakeFiles/awpmd.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/src/logexc.cpp.o" "CMakeFiles/awpmd.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact/TCP/wpmd.cpp.o" "CMakeFiles/awpmd.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact/TCP/wpmd_split.cpp.o" /usr/bin/ranlib libawpmd.a make[3]: Leaving directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' [ 4%] Built target awpmd [ 4%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualrowmatrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualrowmatrix.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualrowmatrix.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dpd.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dpd.cpp:17: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 4%] Building CXX object CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/workspace.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/poems.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/workspace.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/workspace.cpp" [ 4%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.cpp:16: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 5%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMass.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMass.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMass.cpp" [ 5%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.cpp" [ 5%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_ext.cpp" [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_ext.cpp" [ 6%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentum.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentum.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentum.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck.cpp" [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long.cpp" [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long_ext.cpp" [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long.cpp" [ 6%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long_ext.cpp" [ 7%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON 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-I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid_ext.cpp" [ 7%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp" [ 7%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf.cpp" [ 7%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.cpp" [ 7%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_ext.cpp" [ 7%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.cpp" [ 7%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.cpp:16: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 8%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.cpp" [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj.cpp" [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj_ext.cpp" [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dpd.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd_ext.cpp" [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dpd.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_alloy_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_alloy_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_alloy_ext.cpp" [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_alloy_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_fs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_fs_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_fs_ext.cpp" [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_fs_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss_ext.cpp" [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne.cpp:27: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96_ext.cpp" [ 9%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long_ext.cpp" [ 9%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye.cpp" [ 9%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 9%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.cpp" [ 9%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long.cpp" [ 9%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm_ext.cpp" [ 9%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic_ext.cpp" [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long.cpp" [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_ext.cpp" [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs_ext.cpp" [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long_ext.cpp" [ 10%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie_ext.cpp" [ 11%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 11%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferKernel.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferKernel.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferKernel.cpp" [ 11%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor.cpp:18: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm.cpp.o [ 11%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor_shared.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor_shared.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor_shared.cpp" /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_device.h:35, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_kernel.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor_shared.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor_shared.cpp:17: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm.cpp:25: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm.h:20, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared.cpp" [ 11%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared.cpp:27: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw_ext.cpp" [ 11%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table_ext.cpp" [ 12%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp" [ 12%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_ext.cpp" [ 12%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod_ext.cpp" [ 12%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 12%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" 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-fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.cpp" [ 12%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm.h:21, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm.cpp:26: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm_ext.cpp" [ 12%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm.h:21, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm_ext.cpp:22: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta_ext.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 12%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/BodyForce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/BodyForce.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/BodyForce.cpp" [ 12%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid_ext.cpp" [ 12%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CBLattice.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CBLattice.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CBLattice.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_ext.cpp" [ 13%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 13%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CauchyBorn.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CauchyBorn.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CauchyBorn.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl.cpp:24: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/gpu.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl_ext.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl_ext.cpp" [ 14%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CbPotential.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CbPotential.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CbPotential.cpp" [ 14%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.cpp" In file included from /usr/include/CL/cl.h:32, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl.h:19, from /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl_ext.cpp:20: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2) 34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") | ^ [ 14%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ConcentrationRegulator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronDragPower.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronDragPower.cpp" [ 14%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronFlux.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronPhononExchange.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronPhononExchange.cpp" [ 14%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModel.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" 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CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.cpp" [ 14%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Element.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Mesh.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Mesh.cpp" [ 15%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldEulerIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldEulerIntegrator.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldEulerIntegrator.cpp" [ 15%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldManager.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldManager.cpp" [ 15%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Function.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FundamentalAtomicQuantity.cpp" [ 15%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/GhostManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/GhostManager.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/GhostManager.cpp" [ 15%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ImplicitSolveOperator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ImplicitSolveOperator.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ImplicitSolveOperator.cpp" [ 15%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/InterscaleOperators.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" 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-I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KinetoThermostat.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KinetoThermostat.cpp" [ 15%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Kinetostat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Kinetostat.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Kinetostat.cpp" [ 16%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" 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-I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Material.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Material.cpp" [ 16%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.cpp" [ 16%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MeshReader.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MeshReader.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MeshReader.cpp" [ 16%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MoleculeSet.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/NonLinearSolver.cpp" [ 16%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/OutputManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/OutputManager.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/OutputManager.cpp" [ 16%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PaqAtcUtility.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PaqAtcUtility.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PaqAtcUtility.cpp" /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/OutputManager.cpp: In member function ‘void ATC::OutputManager::read_restart_file(std::string, ATC::RESTART_LIST*)’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/OutputManager.cpp:164:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 164 | fread(&myVal,sizeof(double),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 16%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParDiagonalMatrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParDiagonalMatrix.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParDiagonalMatrix.cpp" [ 16%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParSparseMatrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParSparseMatrix.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParSparseMatrix.cpp" [ 16%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" 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-I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PoissonSolver.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PoissonSolver.cpp" [ 17%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PolynomialSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PolynomialSolver.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PolynomialSolver.cpp" [ 17%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PrescribedDataManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PrescribedDataManager.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PrescribedDataManager.cpp" [ 17%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Quadrature.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SchrodingerSolver.cpp" [ 17%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SpeciesTimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SpeciesTimeIntegrator.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SpeciesTimeIntegrator.cpp" [ 17%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Stress.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Stress.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Stress.cpp" [ 17%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ThermalTimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ThermalTimeIntegrator.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ThermalTimeIntegrator.cpp" [ 17%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Thermostat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TimeFilter.cpp" [ 17%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TimeIntegrator.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TimeIntegrator.cpp" [ 17%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferLibrary.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferLibrary.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferLibrary.cpp" [ 17%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.cpp" [ 17%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Vector.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationChargeDiffusion.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationChargeDiffusion.cpp" [ 18%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationDiffusion.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationElectronTemperature.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationElectronTemperature.cpp" [ 18%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationMassDiffusion.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationMassDiffusion.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationMassDiffusion.cpp" [ 18%] Building CXX object CMakeFiles/atc.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationMomentum.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_hybrid.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_hybrid.cpp" [ 18%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle.cpp" /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_hybrid.cpp: In member function ‘virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_hybrid.cpp:338:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 338 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_hybrid.cpp:347:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 347 | if (me == 0) fread(&n,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_hybrid.cpp:350:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 350 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_zero.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_zero.cpp" [ 18%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom.cpp" [ 18%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_map.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_map.cpp" [ 18%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec.cpp" /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_zero.cpp: In member function ‘virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_zero.cpp:133:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 133 | fread(&theta0[1],sizeof(double),atom->nangletypes,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_atomic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_atomic.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_atomic.cpp" [ 19%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF 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-fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_body.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_body.cpp" [ 19%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_charge.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_ellipsoid.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_ellipsoid.cpp" [ 19%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_line.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_line.cpp" [ 19%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/balance.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/balance.cpp" [ 19%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" 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CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond.cpp" [ 19%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_deprecated.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_hybrid.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_hybrid.cpp" [ 19%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_zero.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_zero.cpp" [ 19%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/change_box.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/change_box.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/change_box.cpp" /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_hybrid.cpp: In member function ‘virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_hybrid.cpp:339:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 339 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_hybrid.cpp:348:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 348 | if (me == 0) fread(&n,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_hybrid.cpp:351:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 351 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_zero.cpp: In member function ‘virtual void LAMMPS_NS::BondZero::read_restart(FILE*)’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_zero.cpp:131:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 131 | fread(&r0[1],sizeof(double),atom->nbondtypes,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/citeme.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/citeme.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/citeme.cpp" [ 20%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm.cpp" [ 20%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm_brick.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm_brick.cpp" [ 20%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm_tiled.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm_tiled.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm_tiled.cpp" [ 20%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_aggregate_atom.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_aggregate_atom.cpp" [ 20%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_angle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_angle_local.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_angle_local.cpp" [ 20%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_angmom_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_bond_local.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_bond_local.cpp" [ 20%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_centro_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_cna_atom.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_cna_atom.cpp" [ 21%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_com.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_com_chunk.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_com_chunk.cpp" [ 21%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_contact_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_deprecated.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_deprecated.cpp" [ 21%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_dihedral.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_dihedral_local.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_dihedral_local.cpp" [ 21%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_dipole_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_fragment_atom.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_fragment_atom.cpp" [ 21%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_global_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_global_atom.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_global_atom.cpp" [ 22%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_group_group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_gyration.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_gyration.cpp" [ 22%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_gyration_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_heat_flux.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_heat_flux.cpp" [ 22%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_hexorder_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_ke.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_ke.cpp" [ 22%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_ke_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_msd_chunk.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_msd_chunk.cpp" [ 22%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_omega_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_orientorder_atom.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_orientorder_atom.cpp" [ 22%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pair.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pe.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pe.cpp" [ 23%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pe_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pressure.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pressure.cpp" [ 23%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_property_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_property_local.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_property_local.cpp" [ 23%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_rdf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_reduce.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_reduce.cpp" [ 23%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_reduce_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp.cpp" [ 24%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_chunk.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_chunk.cpp" [ 24%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_com.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_deform.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_deform.cpp" [ 24%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_partial.cpp" [ 24%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_profile.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_profile.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_profile.cpp" [ 24%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_ramp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_vacf.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_vacf.cpp" [ 24%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_vcm_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/deprecated.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/deprecated.cpp" [ 25%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_hybrid.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_hybrid.cpp" [ 25%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_zero.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_zero.cpp" /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_hybrid.cpp: In member function ‘virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_hybrid.cpp:323:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 323 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_hybrid.cpp:332:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 332 | if (me == 0) fread(&n,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_hybrid.cpp:335:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 335 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/displace_atoms.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/displace_atoms.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/displace_atoms.cpp" [ 25%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/domain.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 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-fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/domain.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/domain.cpp" [ 25%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_atom.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_atom.cpp" [ 25%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_cfg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" 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CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_custom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_custom.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_custom.cpp" [ 25%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_dcd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_dcd.cpp" [ 25%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_deprecated.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_deprecated.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_deprecated.cpp" [ 26%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_image.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_movie.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_movie.cpp" [ 26%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_xyz.cpp.o [ 26%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/error.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_xyz.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_xyz.cpp" [ 26%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/finish.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/finish.cpp" [ 26%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix.cpp" [ 26%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_adapt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_atom.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_atom.cpp" [ 26%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_chunk.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_chunk.cpp" [ 26%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_correlate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_correlate.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_correlate.cpp" /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_chunk.cpp: In member function ‘virtual void LAMMPS_NS::FixAveChunk::end_of_step()’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_chunk.cpp:1057:33: warning: ignoring return value of ‘int ftruncate(int, __off_t)’, declared with attribute warn_unused_result [-Wunused-result] 1057 | if (fileend > 0) ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 26%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo.cpp" /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_correlate.cpp: In member function ‘virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_correlate.cpp:537:33: warning: ignoring return value of ‘int ftruncate(int, __off_t)’, declared with attribute warn_unused_result [-Wunused-result] 537 | if (fileend > 0) ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo.cpp: In member function ‘virtual void LAMMPS_NS::FixAveHisto::end_of_step()’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo.cpp:828:33: warning: ignoring return value of ‘int ftruncate(int, __off_t)’, declared with attribute warn_unused_result [-Wunused-result] 828 | if (fileend > 0) ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 26%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo_weight.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo_weight.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo_weight.cpp" /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo_weight.cpp: In member function ‘virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo_weight.cpp:499:33: warning: ignoring return value of ‘int ftruncate(int, __off_t)’, declared with attribute warn_unused_result [-Wunused-result] 499 | if (fileend > 0) ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 26%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_time.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_time.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_time.cpp" [ 27%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_aveforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_aveforce.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_aveforce.cpp" [ 27%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_balance.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_balance.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_balance.cpp" /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_time.cpp: In member function ‘void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_time.cpp:700:33: warning: ignoring return value of ‘int ftruncate(int, __off_t)’, declared with attribute warn_unused_result [-Wunused-result] 700 | if (fileend > 0) ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_time.cpp: In member function ‘void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_time.cpp:911:33: warning: ignoring return value of ‘int ftruncate(int, __off_t)’, declared with attribute warn_unused_result [-Wunused-result] 911 | if (fileend > 0) ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 27%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_box_relax.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_deprecated.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_deprecated.cpp" [ 27%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_drag.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_enforce2d.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_enforce2d.cpp" [ 27%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_external.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_external.cpp" [ 27%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_gravity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_gravity.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_gravity.cpp" [ 27%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_heat.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_heat.cpp" [ 28%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_indent.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_langevin.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_langevin.cpp" [ 28%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_lineforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_neigh_history.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_neigh_history.cpp" [ 28%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nh.cpp" [ 28%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nh_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nh_sphere.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nh_sphere.cpp" [ 28%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nph.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_npt.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_npt.cpp" [ 28%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_npt_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve.cpp" [ 28%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_limit.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_limit.cpp" [ 29%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_noforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_noforce.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_noforce.cpp" [ 29%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nvt_sllod.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nvt_sllod.cpp" [ 29%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nvt_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_planeforce.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_planeforce.cpp" [ 29%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_press_berendsen.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_press_berendsen.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_press_berendsen.cpp" [ 29%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_print.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" 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-I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_property_atom.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_property_atom.cpp" [ 29%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_read_restart.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_read_restart.cpp" [ 29%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_recenter.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_recenter.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_recenter.cpp" [ 29%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_respa.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_respa.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_respa.cpp" [ 29%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_restrain.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_setforce.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_setforce.cpp" [ 30%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_spring.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store.cpp" [ 30%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store_force.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store_force.cpp" [ 30%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store_state.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store_state.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store_state.cpp" [ 30%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_berendsen.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_csvr.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_csvr.cpp" [ 30%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_rescale.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_tmd.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_tmd.cpp" [ 30%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_vector.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall.cpp" [ 31%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_harmonic.cpp" [ 31%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_lj1043.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_lj1043.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_lj1043.cpp" [ 31%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_lj126.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_reflect.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_reflect.cpp" [ 31%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_region.cpp" [ 31%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/force.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/force.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/force.cpp" [ 31%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/image.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/image.cpp" /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/group.cpp: In member function ‘void LAMMPS_NS::Group::read_restart(FILE*)’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/group.cpp:730:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 730 | if (me == 0) fread(&ngroup,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/group.cpp:742:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 742 | if (me == 0) fread(&n,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/group.cpp:746:25: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 746 | if (me == 0) fread(names[i],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 31%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance.cpp" [ 31%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_group.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_group.cpp" [ 31%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_neigh.cpp.o /usr/bin/c++ 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_neigh.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_neigh.cpp" [ 31%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_store.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" 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"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_store.cpp" [ 31%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_time.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_time.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_time.cpp" [ 32%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_var.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_var.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_var.cpp" [ 32%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_deprecated.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_deprecated.cpp" [ 32%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_hybrid.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_hybrid.cpp" [ 32%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_zero.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_zero.cpp" /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_hybrid.cpp: In member function ‘virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_hybrid.cpp:320:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 320 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_hybrid.cpp:329:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 329 | if (me == 0) fread(&n,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_hybrid.cpp:332:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 332 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 32%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/info.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/input.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/input.cpp" [ 32%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/integrate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON 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-I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" 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-I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/integrate.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/integrate.cpp" [ 32%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/irregular.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/irregular.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/irregular.cpp" [ 32%] Building CXX object CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/aarch64-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/tcl -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -g -O2 -fdebug-prefix-map=/<>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o "CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp.o" -c "/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp" /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp: In member function ‘void LAMMPS_NS::KSpace::qsum_qsq()’: /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp:280:3: error: ‘nlocal’ not specified in enclosing ‘parallel’ 280 | for (int i = 0; i < nlocal; i++) { | ^~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp:278:9: error: enclosing ‘parallel’ 278 | #pragma omp parallel for default(none) reduction(+:qsum_local,qsqsum_local) | ^~~ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp:281:19: error: ‘q’ not specified in enclosing ‘parallel’ 281 | qsum_local += q[i]; | ^ /<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp:278:9: error: enclosing ‘parallel’ 278 | #pragma omp parallel for default(none) reduction(+:qsum_local,qsqsum_local) | ^~~ make[3]: *** [CMakeFiles/lmp.dir/build.make:2757: CMakeFiles/lmp.dir/<>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp.o] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' make[2]: *** [CMakeFiles/Makefile2:303: CMakeFiles/lmp.dir/all] Error 2 make[2]: Leaving directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' make[1]: *** [Makefile:133: all] Error 2 make[1]: Leaving directory '/<>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build' dh_auto_build: cd debian/build && make -j4 "INSTALL=install --strip-program=true" returned exit code 2 make: *** [debian/rules:10: build-arch] Error 255 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 20190917-0918 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build-Space: 1545560 Build-Time: 1106 Distribution: eoan Fail-Stage: build Host Architecture: arm64 Install-Time: 142 Job: lammps_0~20181211.gitad1b1897d+dfsg1-2.dsc Machine Architecture: arm64 Package: lammps Package-Time: 1263 Source-Version: 0~20181211.gitad1b1897d+dfsg1-2 Space: 1545560 Status: attempted Version: 0~20181211.gitad1b1897d+dfsg1-2 -------------------------------------------------------------------------------- Finished at 20190917-0918 Build needed 00:21:03, 1545560k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=eoan --arch=arm64 PACKAGEBUILD-17091121 Scanning for processes to kill in build PACKAGEBUILD-17091121