https://launchpad.net/ubuntu/+archive/test-rebuild-20191220-focal-gcc10/+build/18389265 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lgw01-amd64-007 4.4.0-170-generic #199-Ubuntu SMP Thu Nov 14 01:45:04 UTC 2019 x86_64 Buildd toolchain package versions: launchpad-buildd_183 python-lpbuildd_183 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.7 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 5 Jan 21:12:17 ntpdate[1915]: adjust time server 10.211.37.1 offset -0.011616 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18389265 --image-type chroot /home/buildd/filecache-default/e96c25c651525abc9f0cabeb95ea71010abf4ecb Creating target for build PACKAGEBUILD-18389265 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18389265 Starting target for build PACKAGEBUILD-18389265 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18389265 'deb http://ppa.launchpad.net/doko/toolchain/ubuntu focal main' 'deb http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu focal main' 'deb http://ftpmaster.internal/ubuntu focal main restricted universe multiverse' Overriding sources.list in build-PACKAGEBUILD-18389265 RUN: /usr/share/launchpad-buildd/bin/in-target add-trusted-keys --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18389265 Adding trusted keys to build-PACKAGEBUILD-18389265 Warning: apt-key output should not be parsed (stdout is not a terminal) OK Warning: apt-key output should not be parsed (stdout is not a terminal) /etc/apt/trusted.gpg -------------------- pub rsa1024 2009-01-18 [SC] 352B AA4B C10A 077D 04D2 8CAF 726C 32B5 38D0 4956 uid [ unknown] Launchpad PPA for Matthias Klose pub rsa1024 2009-10-22 [SC] 60C3 1780 3A41 BA51 845E 371A 1E93 77A2 BA9E F27F uid [ unknown] Launchpad Toolchain builds /etc/apt/trusted.gpg.d/ubuntu-keyring-2012-archive.gpg ------------------------------------------------------ pub rsa4096 2012-05-11 [SC] 790B C727 7767 219C 42C8 6F93 3B4F E6AC C0B2 1F32 uid [ unknown] Ubuntu Archive Automatic Signing Key (2012) /etc/apt/trusted.gpg.d/ubuntu-keyring-2012-cdimage.gpg ------------------------------------------------------ pub rsa4096 2012-05-11 [SC] 8439 38DF 228D 22F7 B374 2BC0 D94A A3F0 EFE2 1092 uid [ unknown] Ubuntu CD Image Automatic Signing Key (2012) /etc/apt/trusted.gpg.d/ubuntu-keyring-2018-archive.gpg ------------------------------------------------------ pub rsa4096 2018-09-17 [SC] F6EC B376 2474 EDA9 D21B 7022 8719 20D1 991B C93C uid [ unknown] Ubuntu Archive Automatic Signing Key (2018) RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18389265 Updating target for build PACKAGEBUILD-18389265 Get:1 http://ftpmaster.internal/ubuntu focal InRelease [255 kB] Get:2 http://ppa.launchpad.net/doko/toolchain/ubuntu focal InRelease [15.4 kB] Get:3 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu focal InRelease [15.4 kB] Get:4 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 Packages [136 kB] Get:5 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main Translation-en [26.5 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main amd64 Packages [966 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main Translation-en [499 kB] Get:8 http://ftpmaster.internal/ubuntu focal/restricted amd64 Packages [18.4 kB] Get:9 http://ftpmaster.internal/ubuntu focal/restricted Translation-en [5768 B] Get:10 http://ftpmaster.internal/ubuntu focal/universe amd64 Packages [8674 kB] Get:11 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu focal/main amd64 Packages [128 kB] Get:12 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu focal/main Translation-en [23.7 kB] Get:13 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5196 kB] Get:14 http://ftpmaster.internal/ubuntu focal/multiverse amd64 Packages [152 kB] Get:15 http://ftpmaster.internal/ubuntu focal/multiverse Translation-en [110 kB] Fetched 16.2 MB in 3s (5074 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: g++-9 libhogweed4 libisl21 libnettle6 libperl5.28 libstdc++-9-dev perl-modules-5.28 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: cpp-10 g++-10 gcc-10 gcc-10-base libasan6 libctf-nobfd0 libctf0 libgcc-10-dev libgcc-s1 libhogweed5 libisl22 libnettle7 libperl5.30 libstdc++-10-dev perl-modules-5.30 The following packages will be upgraded: apt base-files base-passwd bash binutils binutils-common binutils-x86-64-linux-gnu bsdutils bzip2 cpp cpp-9 debianutils fdisk g++ g++-9 gcc gcc-9 gcc-9-base gpg gpg-agent gpgconf gpgv gzip hostname libacl1 libapparmor1 libapt-pkg5.90 libasan5 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcryptsetup12 libdebconfclient0 libdevmapper1.02.1 libfdisk1 libgcc-9-dev libgcc1 libgcrypt20 libgnutls30 libgomp1 libitm1 libjson-c4 libkmod2 liblockfile-bin liblockfile1 liblsan0 liblz4-1 libmount1 libncurses6 libncursesw6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libquadmath0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1 libsmartcols1 libsqlite3-0 libstdc++-9-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo6 libtsan0 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev lsb-base mount ncurses-base ncurses-bin perl perl-base sensible-utils systemd systemd-sysv sysvinit-utils util-linux 97 upgraded, 15 newly installed, 0 to remove and 0 not upgraded. Need to get 223 MB of archives. After this operation, 752 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main amd64 libc6-dev amd64 2.30-0ubuntu3 [2549 kB] Get:2 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 gcc-10-base amd64 10-20200104-1ubuntu2 [18.9 kB] Get:3 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libgcc-s1 amd64 10-20200104-1ubuntu2 [41.5 kB] Get:4 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libgcc1 amd64 1:10-20200104-1ubuntu2 [41.5 kB] Get:5 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libstdc++6 amd64 10-20200104-1ubuntu2 [501 kB] Get:6 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libgomp1 amd64 10-20200104-1ubuntu2 [101 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main amd64 libc-dev-bin amd64 2.30-0ubuntu3 [71.8 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main amd64 linux-libc-dev amd64 5.3.0-24.26 [1096 kB] Get:9 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libitm1 amd64 10-20200104-1ubuntu2 [26.4 kB] Get:10 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libatomic1 amd64 10-20200104-1ubuntu2 [9268 B] Get:11 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 liblsan0 amd64 10-20200104-1ubuntu2 [144 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main amd64 libc6 amd64 2.30-0ubuntu3 [2725 kB] Get:13 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libtsan0 amd64 10-20200104-1ubuntu2 [320 kB] Get:14 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libubsan1 amd64 10-20200104-1ubuntu2 [136 kB] Get:15 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libquadmath0 amd64 10-20200104-1ubuntu2 [146 kB] Get:16 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libcc1-0 amd64 10-20200104-1ubuntu2 [41.4 kB] Get:17 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 binutils-x86-64-linux-gnu amd64 2.33.50.20200105-2ubuntu2 [1625 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main amd64 base-files amd64 11ubuntu2 [60.1 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main amd64 debianutils amd64 4.9.1 [85.8 kB] Get:20 http://ftpmaster.internal/ubuntu focal/main amd64 bash amd64 5.0-5ubuntu1 [639 kB] Get:21 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libbinutils amd64 2.33.50.20200105-2ubuntu2 [477 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main amd64 bsdutils amd64 1:2.34-0.1ubuntu4 [63.8 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main amd64 gzip amd64 1.10-0ubuntu4 [95.3 kB] Get:24 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 binutils amd64 2.33.50.20200105-2ubuntu2 [3388 B] Get:25 http://ftpmaster.internal/ubuntu focal/main amd64 hostname amd64 3.23 [11.4 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main amd64 ncurses-bin amd64 6.1+20191019-1ubuntu1 [172 kB] Get:27 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 binutils-common amd64 2.33.50.20200105-2ubuntu2 [205 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main amd64 perl-modules-5.30 all 5.30.0-9 [2739 kB] Get:29 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libctf-nobfd0 amd64 2.33.50.20200105-2ubuntu2 [47.2 kB] Get:30 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libctf0 amd64 2.33.50.20200105-2ubuntu2 [47.4 kB] Get:31 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 cpp-10 amd64 10-20200104-1ubuntu2 [46.0 MB] Get:32 http://ftpmaster.internal/ubuntu focal/main amd64 libperl5.30 amd64 5.30.0-9 [3950 kB] Get:33 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libasan6 amd64 10-20200104-1ubuntu2 [344 kB] Get:34 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libgcc-10-dev amd64 10-20200104-1ubuntu2 [2342 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main amd64 perl amd64 5.30.0-9 [224 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main amd64 perl-base amd64 5.30.0-9 [1511 kB] Get:37 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 gcc-10 amd64 10-20200104-1ubuntu2 [52.7 MB] Get:38 http://ftpmaster.internal/ubuntu focal/main amd64 bzip2 amd64 1.0.8-2 [34.1 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main amd64 libbz2-1.0 amd64 1.0.8-2 [32.3 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main amd64 libblkid1 amd64 2.34-0.1ubuntu4 [137 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main amd64 libuuid1 amd64 2.34-0.1ubuntu4 [20.5 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main amd64 libfdisk1 amd64 2.34-0.1ubuntu4 [175 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main amd64 libpcre2-8-0 amd64 10.34-7 [197 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main amd64 libselinux1 amd64 3.0-1 [68.7 kB] Get:45 http://ftpmaster.internal/ubuntu focal/main amd64 libmount1 amd64 2.34-0.1ubuntu4 [149 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main amd64 libncurses6 amd64 6.1+20191019-1ubuntu1 [101 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main amd64 libtinfo6 amd64 6.1+20191019-1ubuntu1 [85.9 kB] Get:48 http://ftpmaster.internal/ubuntu focal/main amd64 libncursesw6 amd64 6.1+20191019-1ubuntu1 [132 kB] Get:49 http://ftpmaster.internal/ubuntu focal/main amd64 libsmartcols1 amd64 2.34-0.1ubuntu4 [101 kB] Get:50 http://ftpmaster.internal/ubuntu focal/main amd64 fdisk amd64 2.34-0.1ubuntu4 [120 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main amd64 util-linux amd64 2.34-0.1ubuntu4 [1022 kB] Get:52 http://ftpmaster.internal/ubuntu focal/main amd64 libdebconfclient0 amd64 0.250ubuntu2 [6336 B] Get:53 http://ftpmaster.internal/ubuntu focal/main amd64 base-passwd amd64 3.5.47 [47.7 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main amd64 libc-bin amd64 2.30-0ubuntu3 [625 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main amd64 ncurses-base all 6.1+20191019-1ubuntu1 [17.9 kB] Get:56 http://ftpmaster.internal/ubuntu focal/main amd64 lsb-base all 11.1.0ubuntu2 [12.1 kB] Get:57 http://ftpmaster.internal/ubuntu focal/main amd64 sysvinit-utils amd64 2.96-1ubuntu1 [20.8 kB] Get:58 http://ftpmaster.internal/ubuntu focal/main amd64 liblz4-1 amd64 1.9.2-2 [55.9 kB] Get:59 http://ftpmaster.internal/ubuntu focal/main amd64 systemd-sysv amd64 244-3ubuntu1 [9368 B] Get:60 http://ftpmaster.internal/ubuntu focal/main amd64 libacl1 amd64 2.2.53-5ubuntu1 [18.7 kB] Get:61 http://ftpmaster.internal/ubuntu focal/main amd64 libapparmor1 amd64 2.13.3-7ubuntu1 [34.3 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main amd64 libaudit-common all 1:2.8.5-2ubuntu5 [4076 B] Get:63 http://ftpmaster.internal/ubuntu focal/main amd64 libcap-ng0 amd64 0.7.9-2.1 [11.1 kB] Get:64 http://ftpmaster.internal/ubuntu focal/main amd64 libaudit1 amd64 1:2.8.5-2ubuntu5 [39.1 kB] Get:65 http://ftpmaster.internal/ubuntu focal/main amd64 libcap2 amd64 1:2.27-1 [14.1 kB] Get:66 http://ftpmaster.internal/ubuntu focal/main amd64 libudev1 amd64 244-3ubuntu1 [76.3 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main amd64 libdevmapper1.02.1 amd64 2:1.02.155-2ubuntu7 [127 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main amd64 libjson-c4 amd64 0.13.1+dfsg-6 [29.2 kB] Get:69 http://ftpmaster.internal/ubuntu focal/main amd64 libcryptsetup12 amd64 2:2.2.2-1ubuntu1 [182 kB] Get:70 http://ftpmaster.internal/ubuntu focal/main amd64 libnettle7 amd64 3.5.1+really3.5.1-2 [114 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main amd64 libhogweed5 amd64 3.5.1+really3.5.1-2 [138 kB] Get:72 http://ftpmaster.internal/ubuntu focal/main amd64 libp11-kit0 amd64 0.23.18.1-2 [189 kB] Get:73 http://ftpmaster.internal/ubuntu focal/main amd64 libtasn1-6 amd64 4.15.0-2 [37.7 kB] Get:74 http://ftpmaster.internal/ubuntu focal/main amd64 libgnutls30 amd64 3.6.11.1-2 [793 kB] Get:75 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libstdc++-10-dev amd64 10-20200104-1ubuntu2 [1667 kB] Get:76 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 g++-10 amd64 10-20200104-1ubuntu2 [49.4 MB] Get:77 http://ftpmaster.internal/ubuntu focal/main amd64 libkmod2 amd64 26-3ubuntu1 [42.9 kB] Get:78 http://ftpmaster.internal/ubuntu focal/main amd64 libpam0g amd64 1.3.1-5ubuntu4 [55.4 kB] Get:79 http://ftpmaster.internal/ubuntu focal/main amd64 libseccomp2 amd64 2.4.2-2ubuntu1 [39.4 kB] Get:80 http://ftpmaster.internal/ubuntu focal/main amd64 mount amd64 2.34-0.1ubuntu4 [115 kB] Get:81 http://ftpmaster.internal/ubuntu focal/main amd64 systemd amd64 244-3ubuntu1 [3677 kB] Get:82 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 g++ amd64 4:10-1ubuntu1 [1612 B] Get:83 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 gcc amd64 4:10-1ubuntu1 [5220 B] Get:84 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 cpp amd64 4:10-1ubuntu1 [27.7 kB] Get:85 http://ftpmaster.internal/ubuntu focal/main amd64 libsystemd0 amd64 244-3ubuntu1 [260 kB] Get:86 http://ftpmaster.internal/ubuntu focal/main amd64 libzstd1 amd64 1.4.4+dfsg-1 [237 kB] Get:87 http://ftpmaster.internal/ubuntu focal/main amd64 libapt-pkg5.90 amd64 1.9.5 [851 kB] Get:88 http://ftpmaster.internal/ubuntu focal/main amd64 libgcrypt20 amd64 1.8.5-3ubuntu1 [419 kB] Get:89 http://ftpmaster.internal/ubuntu focal/main amd64 gpgv amd64 2.2.17-3ubuntu1 [200 kB] Get:90 http://ftpmaster.internal/ubuntu focal/main amd64 apt amd64 1.9.5 [1281 kB] Get:91 http://ftpmaster.internal/ubuntu focal/main amd64 libpam-modules-bin amd64 1.3.1-5ubuntu4 [37.7 kB] Get:92 http://ftpmaster.internal/ubuntu focal/main amd64 libpam-modules amd64 1.3.1-5ubuntu4 [250 kB] Get:93 http://ftpmaster.internal/ubuntu focal/main amd64 libattr1 amd64 1:2.4.48-5 [12.7 kB] Get:94 http://ftpmaster.internal/ubuntu focal/main amd64 libpam-runtime all 1.3.1-5ubuntu4 [37.3 kB] Get:95 http://ftpmaster.internal/ubuntu focal/main amd64 libsepol1 amd64 3.0-1 [252 kB] Get:96 http://ftpmaster.internal/ubuntu focal/main amd64 libsemanage-common all 3.0-1 [9880 B] Get:97 http://ftpmaster.internal/ubuntu focal/main amd64 libsemanage1 amd64 3.0-1 [85.3 kB] Get:98 http://ftpmaster.internal/ubuntu focal/main amd64 libasan5 amd64 9.2.1-21ubuntu1 [395 kB] Get:99 http://ftpmaster.internal/ubuntu focal/main amd64 g++-9 amd64 9.2.1-21ubuntu1 [11.0 MB] Get:100 http://ftpmaster.internal/ubuntu focal/main amd64 gcc-9 amd64 9.2.1-21ubuntu1 [10.4 MB] Get:101 http://ftpmaster.internal/ubuntu focal/main amd64 libstdc++-9-dev amd64 9.2.1-21ubuntu1 [1709 kB] Get:102 http://ftpmaster.internal/ubuntu focal/main amd64 libgcc-9-dev amd64 9.2.1-21ubuntu1 [2362 kB] Get:103 http://ftpmaster.internal/ubuntu focal/main amd64 libisl22 amd64 0.22-2 [592 kB] Get:104 http://ftpmaster.internal/ubuntu focal/main amd64 cpp-9 amd64 9.2.1-21ubuntu1 [9729 kB] Get:105 http://ftpmaster.internal/ubuntu focal/main amd64 gcc-9-base amd64 9.2.1-21ubuntu1 [19.1 kB] Get:106 http://ftpmaster.internal/ubuntu focal/main amd64 sensible-utils all 0.0.12+nmu1 [15.0 kB] Get:107 http://ftpmaster.internal/ubuntu focal/main amd64 libsqlite3-0 amd64 3.30.1-1ubuntu1 [540 kB] Get:108 http://ftpmaster.internal/ubuntu focal/main amd64 gpg amd64 2.2.17-3ubuntu1 [479 kB] Get:109 http://ftpmaster.internal/ubuntu focal/main amd64 gpgconf amd64 2.2.17-3ubuntu1 [124 kB] Get:110 http://ftpmaster.internal/ubuntu focal/main amd64 gpg-agent amd64 2.2.17-3ubuntu1 [232 kB] Get:111 http://ftpmaster.internal/ubuntu focal/main amd64 liblockfile-bin amd64 1.16-1.1 [11.7 kB] Get:112 http://ftpmaster.internal/ubuntu focal/main amd64 liblockfile1 amd64 1.16-1.1 [6680 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 223 MB in 9s (24.3 MB/s) (Reading database ... 12741 files and directories currently installed.) Preparing to unpack .../libc6-dev_2.30-0ubuntu3_amd64.deb ... Unpacking libc6-dev:amd64 (2.30-0ubuntu3) over (2.30-0ubuntu2) ... Preparing to unpack .../libc-dev-bin_2.30-0ubuntu3_amd64.deb ... Unpacking libc-dev-bin (2.30-0ubuntu3) over (2.30-0ubuntu2) ... Preparing to unpack .../linux-libc-dev_5.3.0-24.26_amd64.deb ... Unpacking linux-libc-dev:amd64 (5.3.0-24.26) over (5.3.0-18.19) ... Selecting previously unselected package gcc-10-base:amd64. Preparing to unpack .../gcc-10-base_10-20200104-1ubuntu2_amd64.deb ... Unpacking gcc-10-base:amd64 (10-20200104-1ubuntu2) ... Setting up gcc-10-base:amd64 (10-20200104-1ubuntu2) ... Selecting previously unselected package libgcc-s1:amd64. (Reading database ... 12747 files and directories currently installed.) Preparing to unpack .../libgcc-s1_10-20200104-1ubuntu2_amd64.deb ... Unpacking libgcc-s1:amd64 (10-20200104-1ubuntu2) ... Setting up libgcc-s1:amd64 (10-20200104-1ubuntu2) ... (Reading database ... 12750 files and directories currently installed.) Preparing to unpack .../libgcc1_1%3a10-20200104-1ubuntu2_amd64.deb ... Unpacking libgcc1 (1:10-20200104-1ubuntu2) over (1:9.2.1-9ubuntu2) ... Setting up libgcc1 (1:10-20200104-1ubuntu2) ... (Reading database ... 12750 files and directories currently installed.) Preparing to unpack .../libc6_2.30-0ubuntu3_amd64.deb ... Unpacking libc6:amd64 (2.30-0ubuntu3) over (2.30-0ubuntu2) ... Setting up libc6:amd64 (2.30-0ubuntu3) ... (Reading database ... 12750 files and directories currently installed.) Preparing to unpack .../base-files_11ubuntu2_amd64.deb ... Unpacking base-files (11ubuntu2) over (10.2ubuntu7) ... Setting up base-files (11ubuntu2) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... 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Setting up libquadmath0:amd64 (10-20200104-1ubuntu2) ... Setting up libatomic1:amd64 (10-20200104-1ubuntu2) ... Setting up libubsan1:amd64 (10-20200104-1ubuntu2) ... Setting up libdevmapper1.02.1:amd64 (2:1.02.155-2ubuntu7) ... Setting up mount (2.34-0.1ubuntu4) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up gpgconf (2.2.17-3ubuntu1) ... Setting up libperl5.30:amd64 (5.30.0-9) ... Setting up libisl22:amd64 (0.22-2) ... Setting up liblockfile1:amd64 (1.16-1.1) ... Setting up libjson-c4:amd64 (0.13.1+dfsg-6) ... Setting up libbinutils:amd64 (2.33.50.20200105-2ubuntu2) ... Setting up libc-dev-bin (2.30-0ubuntu3) ... Setting up libcc1-0:amd64 (10-20200104-1ubuntu2) ... Setting up gpg (2.2.17-3ubuntu1) ... Setting up liblsan0:amd64 (10-20200104-1ubuntu2) ... Setting up cpp-10 (10-20200104-1ubuntu2) ... Setting up libitm1:amd64 (10-20200104-1ubuntu2) ... Setting up libkmod2:amd64 (26-3ubuntu1) ... Setting up gcc-9-base:amd64 (9.2.1-21ubuntu1) ... Setting up libtsan0:amd64 (10-20200104-1ubuntu2) ... Setting up libctf0:amd64 (2.33.50.20200105-2ubuntu2) ... Setting up gpg-agent (2.2.17-3ubuntu1) ... Installing new version of config file /etc/logcheck/ignore.d.server/gpg-agent ... Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-browser.socket -> /usr/lib/systemd/user/gpg-agent-browser.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-extra.socket -> /usr/lib/systemd/user/gpg-agent-extra.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-ssh.socket -> /usr/lib/systemd/user/gpg-agent-ssh.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent.socket -> /usr/lib/systemd/user/gpg-agent.socket. Setting up libgcc-10-dev:amd64 (10-20200104-1ubuntu2) ... Setting up libasan5:amd64 (9.2.1-21ubuntu1) ... Setting up perl (5.30.0-9) ... Setting up cpp (4:10-1ubuntu1) ... Setting up cpp-9 (9.2.1-21ubuntu1) ... Setting up libc6-dev:amd64 (2.30-0ubuntu3) ... Setting up libcryptsetup12:amd64 (2:2.2.2-1ubuntu1) ... Setting up binutils-x86-64-linux-gnu (2.33.50.20200105-2ubuntu2) ... Setting up libstdc++-10-dev:amd64 (10-20200104-1ubuntu2) ... Setting up systemd (244-3ubuntu1) ... Installing new version of config file /etc/dhcp/dhclient-enter-hooks.d/resolved ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from KVM UUID. Setting up binutils (2.33.50.20200105-2ubuntu2) ... Setting up libgcc-9-dev:amd64 (9.2.1-21ubuntu1) ... Setting up gcc-10 (10-20200104-1ubuntu2) ... Setting up gcc-9 (9.2.1-21ubuntu1) ... Setting up systemd-sysv (244-3ubuntu1) ... Setting up g++-10 (10-20200104-1ubuntu2) ... Setting up libstdc++-9-dev:amd64 (9.2.1-21ubuntu1) ... Setting up gcc (4:10-1ubuntu1) ... Setting up g++-9 (9.2.1-21ubuntu1) ... Setting up g++ (4:10-1ubuntu1) ... Processing triggers for libc-bin (2.30-0ubuntu3) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-18389265 amd64 focal -c chroot:build-PACKAGEBUILD-18389265 --arch=amd64 --dist=focal --nolog -A gpp4_1.3.1-0ubuntu9.dsc Initiating build PACKAGEBUILD-18389265 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-170-generic #199-Ubuntu SMP Thu Nov 14 01:45:04 UTC 2019 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-007.buildd +==============================================================================+ | gpp4 1.3.1-0ubuntu9 (amd64) 05 Jan 2020 21:13 | +==============================================================================+ Package: gpp4 Version: 1.3.1-0ubuntu9 Source Version: 1.3.1-0ubuntu9 Distribution: focal Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/gpp4-YtmG3H/gpp4-1.3.1' with '<>' I: NOTICE: Log filtering will replace 'build/gpp4-YtmG3H' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-18389265/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- gpp4_1.3.1-0ubuntu9.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-6l84Go/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-6l84Go/apt_archive ./ InRelease Get:2 copy:/<>/resolver-6l84Go/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-6l84Go/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-6l84Go/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-6l84Go/apt_archive ./ Packages [526 B] Fetched 2859 B in 0s (208 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-9 libhogweed4 libisl21 libnettle6 libperl5.28 libstdc++-9-dev perl-modules-5.28 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-6l84Go/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 15723 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 9), dh-autoreconf, pkg-config, libmmdb2-dev, gfortran, m4, doxygen Filtered Build-Depends: debhelper (>= 9), dh-autoreconf, pkg-config, libmmdb2-dev, gfortran, m4, doxygen dpkg-deb: building package 'sbuild-build-depends-gpp4-dummy' in '/<>/resolver-Km76R4/apt_archive/sbuild-build-depends-gpp4-dummy.deb'. Ign:1 copy:/<>/resolver-Km76R4/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Km76R4/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-Km76R4/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Km76R4/apt_archive ./ Sources [260 B] Get:5 copy:/<>/resolver-Km76R4/apt_archive ./ Packages [569 B] Fetched 2948 B in 0s (292 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install gpp4 build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-9 libhogweed4 libisl21 libnettle6 libperl5.28 libstdc++-9-dev perl-modules-5.28 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz file gettext gettext-base gfortran gfortran-10 groff-base intltool-debian libarchive-zip-perl libbsd0 libclang1-9 libcroco3 libdebhelper-perl libedit2 libelf1 libfile-stripnondeterminism-perl libgfortran-10-dev libgfortran5 libglib2.0-0 libicu63 libllvm9 libmagic-mgc libmagic1 libmmdb2-0 libmmdb2-dev libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxapian30 libxml2 m4 man-db pkg-config po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make doxygen-latex doxygen-doc doxygen-gui graphviz gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-10-multilib gfortran-10-doc libcoarrays-dev groff libtool-doc gcj-jdk xapian-tools m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz file gettext gettext-base gfortran gfortran-10 groff-base intltool-debian libarchive-zip-perl libbsd0 libclang1-9 libcroco3 libdebhelper-perl libedit2 libelf1 libfile-stripnondeterminism-perl libgfortran-10-dev libgfortran5 libglib2.0-0 libicu63 libllvm9 libmagic-mgc libmagic1 libmmdb2-0 libmmdb2-dev libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxapian30 libxml2 m4 man-db pkg-config po-debconf sbuild-build-depends-gpp4-dummy 0 upgraded, 46 newly installed, 0 to remove and 0 not upgraded. Need to get 92.5 MB of archives. After this operation, 410 MB of additional disk space will be used. Get:1 copy:/<>/resolver-Km76R4/apt_archive ./ sbuild-build-depends-gpp4-dummy 0.invalid.0 [900 B] Get:2 http://ftpmaster.internal/ubuntu focal/main amd64 libbsd0 amd64 0.10.0-1 [45.4 kB] Get:3 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libgfortran5 amd64 10-20200104-1ubuntu2 [728 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main amd64 bsdmainutils amd64 11.1.2ubuntu2 [181 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main amd64 groff-base amd64 1.22.4-4 [865 kB] Get:7 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 libgfortran-10-dev amd64 10-20200104-1ubuntu2 [772 kB] Get:8 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 gfortran-10 amd64 10-20200104-1ubuntu2 [47.1 MB] Get:9 http://ftpmaster.internal/ubuntu focal/main amd64 libpipeline1 amd64 1.5.1-3 [27.4 kB] Get:10 http://ftpmaster.internal/ubuntu focal/main amd64 man-db amd64 2.9.0-2 [1114 kB] Get:11 http://ftpmaster.internal/ubuntu focal/main amd64 libmagic-mgc amd64 1:5.37-6 [209 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main amd64 libmagic1 amd64 1:5.37-6 [75.3 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main amd64 file amd64 1:5.37-6 [23.2 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main amd64 libelf1 amd64 0.176-1.1 [44.1 kB] Get:15 http://ftpmaster.internal/ubuntu focal/main amd64 libglib2.0-0 amd64 2.63.3-1 [1279 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main amd64 libicu63 amd64 63.2-2 [8294 kB] Get:17 http://ppa.launchpad.net/doko/toolchain/ubuntu focal/main amd64 gfortran amd64 4:10-1ubuntu1 [1372 B] Get:18 http://ftpmaster.internal/ubuntu focal/main amd64 libxml2 amd64 2.9.4+dfsg1-8ubuntu1 [648 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main amd64 gettext-base amd64 0.19.8.1-10 [50.2 kB] Get:20 http://ftpmaster.internal/ubuntu focal/main amd64 libedit2 amd64 3.1-20191211-1 [86.8 kB] Get:21 http://ftpmaster.internal/ubuntu focal/main amd64 libsigsegv2 amd64 2.12-2 [13.9 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main amd64 m4 amd64 1.4.18-4 [199 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main amd64 autoconf all 2.69-11ubuntu1 [321 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main amd64 autotools-dev all 20180224.1 [39.6 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main amd64 automake all 1:1.16.1-4ubuntu3 [522 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main amd64 autopoint all 0.19.8.1-10 [412 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main amd64 libtool all 2.4.6-11 [194 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main amd64 dh-autoreconf all 19 [16.1 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main amd64 libdebhelper-perl all 12.7.1ubuntu1 [52.0 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main amd64 libarchive-zip-perl all 1.67-1 [90.4 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main amd64 libsub-override-perl all 0.09-2 [9532 B] Get:32 http://ftpmaster.internal/ubuntu focal/main amd64 libfile-stripnondeterminism-perl all 1.6.3-1 [16.0 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main amd64 dh-strip-nondeterminism all 1.6.3-1 [5224 B] Get:34 http://ftpmaster.internal/ubuntu focal/main amd64 dwz amd64 0.13-5 [151 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main amd64 gettext amd64 0.19.8.1-10 [897 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main amd64 po-debconf all 1.0.21 [233 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main amd64 debhelper all 12.7.1ubuntu1 [875 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main amd64 libllvm9 amd64 1:9.0.1-2 [14.8 MB] Get:41 http://ftpmaster.internal/ubuntu focal/universe amd64 libclang1-9 amd64 1:9.0.1-2 [6681 kB] Get:42 http://ftpmaster.internal/ubuntu focal/universe amd64 libxapian30 amd64 1.4.12-1 [660 kB] Get:43 http://ftpmaster.internal/ubuntu focal/universe amd64 doxygen amd64 1.8.13-12ubuntu1 [4159 kB] Get:44 http://ftpmaster.internal/ubuntu focal/universe amd64 libmmdb2-0 amd64 2.0.5-1 [326 kB] Get:45 http://ftpmaster.internal/ubuntu focal/universe amd64 libmmdb2-dev amd64 2.0.5-1 [91.1 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main amd64 pkg-config amd64 0.29.1-0ubuntu3 [45.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 92.5 MB in 3s (30.7 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 15723 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2ubuntu2_amd64.deb ... Unpacking bsdmainutils (11.1.2ubuntu2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-4_amd64.deb ... Unpacking groff-base (1.22.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-3_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-3) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.0-2_amd64.deb ... Unpacking man-db (2.9.0-2) ... 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Selecting previously unselected package libmmdb2-0:amd64. Preparing to unpack .../42-libmmdb2-0_2.0.5-1_amd64.deb ... Unpacking libmmdb2-0:amd64 (2.0.5-1) ... Selecting previously unselected package libmmdb2-dev. Preparing to unpack .../43-libmmdb2-dev_2.0.5-1_amd64.deb ... Unpacking libmmdb2-dev (2.0.5-1) ... Selecting previously unselected package pkg-config. Preparing to unpack .../44-pkg-config_0.29.1-0ubuntu3_amd64.deb ... Unpacking pkg-config (0.29.1-0ubuntu3) ... Selecting previously unselected package sbuild-build-depends-gpp4-dummy. Preparing to unpack .../45-sbuild-build-depends-gpp4-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-gpp4-dummy (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.1-3) ... Setting up libxapian30:amd64 (1.4.12-1) ... Setting up libmmdb2-0:amd64 (2.0.5-1) ... Setting up libmagic-mgc (1:5.37-6) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:amd64 (2.63.3-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (12.7.1ubuntu1) ... Setting up libmagic1:amd64 (1:5.37-6) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.37-6) ... Setting up libicu63:amd64 (63.2-2) ... Setting up autotools-dev (20180224.1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libmmdb2-dev (2.0.5-1) ... Setting up autopoint (0.19.8.1-10) ... Setting up pkg-config (0.29.1-0ubuntu3) ... Setting up libgfortran5:amd64 (10-20200104-1ubuntu2) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libgfortran-10-dev:amd64 (10-20200104-1ubuntu2) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-8ubuntu1) ... Setting up libfile-stripnondeterminism-perl (1.6.3-1) ... Setting up libtool (2.4.6-11) ... Setting up libedit2:amd64 (3.1-20191211-1) ... Setting up m4 (1.4.18-4) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up gfortran-10 (10-20200104-1ubuntu2) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up autoconf (2.69-11ubuntu1) ... Setting up dh-strip-nondeterminism (1.6.3-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up libllvm9:amd64 (1:9.0.1-2) ... Setting up automake (1:1.16.1-4ubuntu3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10) ... Setting up libclang1-9 (1:9.0.1-2) ... Setting up man-db (2.9.0-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up gfortran (4:10-1ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up intltool-debian (0.35.0+20060710.5) ... Setting up doxygen (1.8.13-12ubuntu1) ... Setting up po-debconf (1.0.21) ... Setting up dh-autoreconf (19) ... Setting up debhelper (12.7.1ubuntu1) ... Setting up sbuild-build-depends-gpp4-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.30-0ubuntu3) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-170-generic amd64 (x86_64) Toolchain package versions: binutils_2.33.50.20200105-2ubuntu2 dpkg-dev_1.19.7ubuntu2 g++-10_10-20200104-1ubuntu2 g++-9_9.2.1-21ubuntu1 gcc-10_10-20200104-1ubuntu2 gcc-9_9.2.1-21ubuntu1 libc6-dev_2.30-0ubuntu3 libstdc++-10-dev_10-20200104-1ubuntu2 libstdc++-9-dev_9.2.1-21ubuntu1 libstdc++6_10-20200104-1ubuntu2 linux-libc-dev_5.3.0-24.26 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.5 autoconf_2.69-11ubuntu1 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11ubuntu2 base-passwd_3.5.47 bash_5.0-5ubuntu1 binutils_2.33.50.20200105-2ubuntu2 binutils-common_2.33.50.20200105-2ubuntu2 binutils-x86-64-linux-gnu_2.33.50.20200105-2ubuntu2 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.34-0.1ubuntu4 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3ubuntu2 cpp_4:10-1ubuntu1 cpp-10_10-20200104-1ubuntu2 cpp-9_9.2.1-21ubuntu1 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.7.1ubuntu1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-1 diffutils_1:3.7-3 doxygen_1.8.13-12ubuntu1 dpkg_1.19.7ubuntu2 dpkg-dev_1.19.7ubuntu2 dwz_0.13-5 e2fsprogs_1.45.3-4ubuntu2 fakeroot_1.24-1 fdisk_2.34-0.1ubuntu4 file_1:5.37-6 findutils_4.6.0+git+20190209-2ubuntu1 g++_4:10-1ubuntu1 g++-10_10-20200104-1ubuntu2 g++-9_9.2.1-21ubuntu1 gcc_4:10-1ubuntu1 gcc-10_10-20200104-1ubuntu2 gcc-10-base_10-20200104-1ubuntu2 gcc-9_9.2.1-21ubuntu1 gcc-9-base_9.2.1-21ubuntu1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gfortran_4:10-1ubuntu1 gfortran-10_10-20200104-1ubuntu2 gpg_2.2.17-3ubuntu1 gpg-agent_2.2.17-3ubuntu1 gpgconf_2.2.17-3ubuntu1 gpgv_2.2.17-3ubuntu1 grep_3.3-1build1 groff-base_1.22.4-4 gzip_1.10-0ubuntu4 hostname_3.23 init_1.57 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5ubuntu1 libapparmor1_2.13.3-7ubuntu1 libapt-pkg5.90_1.9.5 libarchive-zip-perl_1.67-1 libargon2-1_0~20171227-0.2 libasan5_9.2.1-21ubuntu1 libasan6_10-20200104-1ubuntu2 libassuan0_2.5.3-7ubuntu1 libatomic1_10-20200104-1ubuntu2 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu5 libaudit1_1:2.8.5-2ubuntu5 libbinutils_2.33.50.20200105-2ubuntu2 libblkid1_2.34-0.1ubuntu4 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-0ubuntu3 libc-dev-bin_2.30-0ubuntu3 libc6_2.30-0ubuntu3 libc6-dev_2.30-0ubuntu3 libcap-ng0_0.7.9-2.1 libcap2_1:2.27-1 libcc1-0_10-20200104-1ubuntu2 libclang1-9_1:9.0.1-2 libcom-err2_1.45.3-4ubuntu2 libcroco3_0.6.13-1 libcryptsetup12_2:2.2.2-1ubuntu1 libctf-nobfd0_2.33.50.20200105-2ubuntu2 libctf0_2.33.50.20200105-2ubuntu2 libdb5.3_5.3.28+dfsg1-0.6ubuntu1 libdebconfclient0_0.250ubuntu2 libdebhelper-perl_12.7.1ubuntu1 libdevmapper1.02.1_2:1.02.155-2ubuntu7 libdpkg-perl_1.19.7ubuntu2 libedit2_3.1-20191211-1 libelf1_0.176-1.1 libext2fs2_1.45.3-4ubuntu2 libfakeroot_1.24-1 libfdisk1_2.34-0.1ubuntu4 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.6.3-1 libgcc-10-dev_10-20200104-1ubuntu2 libgcc-9-dev_9.2.1-21ubuntu1 libgcc-s1_10-20200104-1ubuntu2 libgcc1_1:10-20200104-1ubuntu2 libgcrypt20_1.8.5-3ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran-10-dev_10-20200104-1ubuntu2 libgfortran5_10-20200104-1ubuntu2 libglib2.0-0_2.63.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.11.1-2 libgomp1_10-20200104-1ubuntu2 libgpg-error0_1.36-7 libhogweed4_3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libip4tc2_1.8.3-2ubuntu5 libisl21_0.21-2 libisl22_0.22-2 libitm1_10-20200104-1ubuntu2 libjson-c4_0.13.1+dfsg-6 libkmod2_26-3ubuntu1 libllvm9_1:9.0.1-2 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_10-20200104-1ubuntu2 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.37-6 libmagic1_1:5.37-6 libmmdb2-0_2.0.5-1 libmmdb2-dev_2.0.5-1 libmount1_2.34-0.1ubuntu4 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses6_6.1+20191019-1ubuntu1 libncursesw6_6.1+20191019-1ubuntu1 libnettle6_3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnpth0_1.6-1 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5ubuntu4 libpam-modules-bin_1.3.1-5ubuntu4 libpam-runtime_1.3.1-5ubuntu4 libpam0g_1.3.1-5ubuntu4 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12 libperl5.28_5.28.1-6build1 libperl5.30_5.30.0-9 libpipeline1_1.5.1-3 libpng16-16_1.6.37-1 libprocps7_2:3.3.15-2ubuntu3 libquadmath0_10-20200104-1ubuntu2 libreadline8_8.0-3 libseccomp2_2.4.2-2ubuntu1 libselinux1_3.0-1 libsemanage-common_3.0-1 libsemanage1_3.0-1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1ubuntu4 libsqlite3-0_3.30.1-1ubuntu1 libss2_1.45.3-4ubuntu2 libssl1.1_1.1.1c-1ubuntu4 libstdc++-10-dev_10-20200104-1ubuntu2 libstdc++-9-dev_9.2.1-21ubuntu1 libstdc++6_10-20200104-1ubuntu2 libsub-override-perl_0.09-2 libsystemd0_244-3ubuntu1 libtasn1-6_4.15.0-2 libtinfo6_6.1+20191019-1ubuntu1 libtool_2.4.6-11 libtsan0_10-20200104-1ubuntu2 libubsan1_10-20200104-1ubuntu2 libuchardet0_0.0.6-3 libudev1_244-3ubuntu1 libunistring2_0.9.10-2 libuuid1_2.34-0.1ubuntu4 libxapian30_1.4.12-1 libxml2_2.9.4+dfsg1-8ubuntu1 libzstd1_1.4.4+dfsg-1 linux-libc-dev_5.3.0-24.26 lockfile-progs_0.1.18 login_1:4.5-1.1ubuntu4 logsave_1.45.3-4ubuntu2 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mawk_1.3.3-17ubuntu3 mount_2.34-0.1ubuntu4 ncurses-base_6.1+20191019-1ubuntu1 ncurses-bin_6.1+20191019-1ubuntu1 openssl_1.1.1c-1ubuntu4 optipng_0.7.7-1 passwd_1:4.5-1.1ubuntu4 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6build1 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 pkg-config_0.29.1-0ubuntu3 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu3 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-gpp4-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 systemd_244-3ubuntu1 systemd-sysv_244-3ubuntu1 sysvinit-utils_2.96-1ubuntu1 tar_1.30+dfsg-6 tzdata_2019c-3 ubuntu-keyring_2018.09.18.1 util-linux_2.34-0.1ubuntu4 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Jul 17 12:24:41 2018 UTC gpgv: using RSA key D56571B88A8BBAF140BF63D6BD7EAA60778FA6F5 gpgv: issuer "doko@ubuntu.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./gpp4_1.3.1-0ubuntu9.dsc dpkg-source: info: extracting gpp4 in gpp4-1.3.1 dpkg-source: info: unpacking gpp4_1.3.1.orig.tar.gz dpkg-source: info: unpacking gpp4_1.3.1-0ubuntu9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying libtool_ppc64el.patch dpkg-source: info: applying mmdb2.diff Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-18389265 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-18389265 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-18389265 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package gpp4 dpkg-buildpackage: info: source version 1.3.1-0ubuntu9 dpkg-buildpackage: info: source distribution cosmic dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh_testdir dh_testroot rm -f *-stamp config.log config.cache # Clean up after the build process. [ ! -f Makefile ] || /usr/bin/make distclean # remove the doxygen-generated tree rm -rf doc/ dh_autoreconf_clean dh_clean debian/rules build dh_testdir dh_autoreconf configure.ac:18: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... config/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... config/libtool.m4:4176: _LT_LINKER_SHLIBS is expanded from... config/libtool.m4:5259: _LT_LANG_C_CONFIG is expanded from... config/libtool.m4:138: _LT_SETUP is expanded from... config/libtool.m4:67: LT_INIT is expanded from... config/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:18: the top level configure.ac:18: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... config/libtool.m4:4176: _LT_LINKER_SHLIBS is expanded from... config/libtool.m4:5259: _LT_LANG_C_CONFIG is expanded from... config/libtool.m4:138: _LT_SETUP is expanded from... config/libtool.m4:67: LT_INIT is expanded from... config/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:18: the top level configure.ac:18: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... config/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... config/libtool.m4:4176: _LT_LINKER_SHLIBS is expanded from... config/libtool.m4:5259: _LT_LANG_C_CONFIG is expanded from... config/libtool.m4:138: _LT_SETUP is expanded from... config/libtool.m4:67: LT_INIT is expanded from... config/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:18: the top level configure.ac:18: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... config/libtool.m4:4176: _LT_LINKER_SHLIBS is expanded from... config/libtool.m4:5259: _LT_LANG_C_CONFIG is expanded from... config/libtool.m4:138: _LT_SETUP is expanded from... config/libtool.m4:67: LT_INIT is expanded from... config/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:18: the top level configure.ac:18: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... config/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... config/libtool.m4:4176: _LT_LINKER_SHLIBS is expanded from... config/libtool.m4:5259: _LT_LANG_C_CONFIG is expanded from... config/libtool.m4:138: _LT_SETUP is expanded from... config/libtool.m4:67: LT_INIT is expanded from... config/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:18: the top level configure.ac:18: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... config/libtool.m4:4176: _LT_LINKER_SHLIBS is expanded from... config/libtool.m4:5259: _LT_LANG_C_CONFIG is expanded from... config/libtool.m4:138: _LT_SETUP is expanded from... config/libtool.m4:67: LT_INIT is expanded from... config/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:18: the top level libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'. libtoolize: copying file 'config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'config'. libtoolize: copying file 'config/libtool.m4' libtoolize: copying file 'config/ltoptions.m4' libtoolize: copying file 'config/ltsugar.m4' libtoolize: copying file 'config/ltversion.m4' libtoolize: copying file 'config/lt~obsolete.m4' configure.ac:12: installing 'config/compile' configure.ac:9: installing 'config/missing' src/Makefile.am: installing 'config/depcomp' CFLAGS="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CXXFLAGS="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" FCFLAGS="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong" FFLAGS="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong" GCJFLAGS="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" OBJCFLAGS="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" OBJCXXFLAGS="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" ./configure --prefix=/usr checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E checking for g77... no checking for xlf... no checking for f77... f77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... yes checking if f77 supports -c -o file.o... yes checking if f77 supports -c -o file.o... (cached) yes checking whether the f77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/x86_64-linux-gnu/10 -L/usr/lib/gcc/x86_64-linux-gnu/10/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/10/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/10/../../.. -lgfortran -lm -lquadmath checking for cos in -lm... yes checking for sin in -lm... yes checking for ANSI C header files... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for stdint.h... (cached) yes checking for string.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking for sys/stat.h... (cached) yes checking for unistd.h... (cached) yes checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking for an ANSI C-conforming const... yes checking for mode_t... yes checking for off_t... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking for working strtod... yes checking for vprintf... yes checking for _doprnt... no checking for strnlen... yes checking for memmove... yes checking for memset... yes checking for mkdir... yes checking for pow... yes checking for putenv... yes checking for rint... yes checking for setenv... yes checking for sqrt... yes checking for strchr... yes checking for strdup... yes checking for strerror... yes checking for strrchr... yes checking for strstr... yes checking for strlcpy... no checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for MMDB... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating gpp4.pc config.status: creating gpp4f.pc config.status: creating gpp4.spec config.status: creating gpp4.info config.status: creating Doxyfile config.status: creating src/Makefile config.status: creating src_f/Makefile config.status: creating data/Makefile config.status: creating test/Makefile config.status: creating src/ccp4_program.h config.status: executing depfiles commands config.status: executing libtool commands touch configure-stamp dh_testdir # Build the libary /usr/bin/make make[1]: Entering directory '/<>' Making all in src make[2]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_array.lo -MD -MP -MF .deps/ccp4_array.Tpo -c -o ccp4_array.lo ccp4_array.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_array.lo -MD -MP -MF .deps/ccp4_array.Tpo -c ccp4_array.c -fPIC -DPIC -o .libs/ccp4_array.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_array.lo -MD -MP -MF .deps/ccp4_array.Tpo -c ccp4_array.c -o ccp4_array.o >/dev/null 2>&1 mv -f .deps/ccp4_array.Tpo .deps/ccp4_array.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_data.lo -MD -MP -MF .deps/cmap_data.Tpo -c -o cmap_data.lo cmap_data.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_data.lo -MD -MP -MF .deps/cmap_data.Tpo -c cmap_data.c -fPIC -DPIC -o .libs/cmap_data.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_data.lo -MD -MP -MF .deps/cmap_data.Tpo -c cmap_data.c -o cmap_data.o >/dev/null 2>&1 mv -f .deps/cmap_data.Tpo .deps/cmap_data.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmtzlib.lo -MD -MP -MF .deps/cmtzlib.Tpo -c -o cmtzlib.lo cmtzlib.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmtzlib.lo -MD -MP -MF .deps/cmtzlib.Tpo -c cmtzlib.c -fPIC -DPIC -o .libs/cmtzlib.o cmtzlib.c: In function ‘MtzPut’: cmtzlib.c:2949:27: warning: comparison between pointer and zero character constant [-Wpointer-compare] 2949 | if (batch->gonlab[0] != '\0') { | ^~ cmtzlib.c:2949:10: note: did you mean to dereference the pointer? 2949 | if (batch->gonlab[0] != '\0') { | ^ cmtzlib.c:2730:27: warning: ‘%74s’ directive writing between 74 and 80 bytes into a region of size 76 [-Wformat-overflow=] 2730 | sprintf(hdrrec,"SYMM %74s",symline); | ^~~~ ~~~~~~~ In file included from /usr/include/stdio.h:867, from cmtzlib.c:24: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 80 and 86 bytes into a destination of size 81 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cmtzlib.c:2824:45: warning: ‘%1X’ directive writing between 1 and 8 bytes into a region of size 7 [-Wformat-overflow=] 2824 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d","M/ISYM",mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); | ^~~ cmtzlib.c:2824:20: note: directive argument in the range [0, 2147483647] 2824 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d","M/ISYM",mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from cmtzlib.c:24: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 81 and 95 bytes into a destination of size 81 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cmtzlib.c:2826:45: warning: ‘%1X’ directive writing between 1 and 8 bytes into a region of size 7 [-Wformat-overflow=] 2826 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d",mtz->xtal[i]->set[j]->col[k]->label,mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); | ^~~ cmtzlib.c:2826:20: note: directive argument in the range [0, 2147483647] 2826 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d",mtz->xtal[i]->set[j]->col[k]->label,mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from cmtzlib.c:24: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 81 and 95 bytes into a destination of size 81 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmtzlib.lo -MD -MP -MF .deps/cmtzlib.Tpo -c cmtzlib.c -o cmtzlib.o >/dev/null 2>&1 mv -f .deps/cmtzlib.Tpo .deps/cmtzlib.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_general.lo -MD -MP -MF .deps/ccp4_general.Tpo -c -o ccp4_general.lo ccp4_general.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_general.lo -MD -MP -MF .deps/ccp4_general.Tpo -c ccp4_general.c -fPIC -DPIC -o .libs/ccp4_general.o ccp4_general.c: In function ‘ccp4_banner’: ccp4_general.c:1407:81: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 1407 | sprintf(l2, "\\//\\| gpp4 library version: %s, compiled: %s", GPP4_VERSION_NO,__DATE__); | ^~~~~~~~ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_general.lo -MD -MP -MF .deps/ccp4_general.Tpo -c ccp4_general.c -o ccp4_general.o >/dev/null 2>&1 mv -f .deps/ccp4_general.Tpo .deps/ccp4_general.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_header.lo -MD -MP -MF .deps/cmap_header.Tpo -c -o cmap_header.lo cmap_header.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_header.lo -MD -MP -MF .deps/cmap_header.Tpo -c cmap_header.c -fPIC -DPIC -o .libs/cmap_header.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_header.lo -MD -MP -MF .deps/cmap_header.Tpo -c cmap_header.c -o cmap_header.o >/dev/null 2>&1 mv -f .deps/cmap_header.Tpo .deps/cmap_header.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT csymlib.lo -MD -MP -MF .deps/csymlib.Tpo -c -o csymlib.lo csymlib.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT csymlib.lo -MD -MP -MF .deps/csymlib.Tpo -c csymlib.c -fPIC -DPIC -o .libs/csymlib.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT csymlib.lo -MD -MP -MF .deps/csymlib.Tpo -c csymlib.c -o csymlib.o >/dev/null 2>&1 mv -f .deps/csymlib.Tpo .deps/csymlib.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_parser.lo -MD -MP -MF .deps/ccp4_parser.Tpo -c -o ccp4_parser.lo ccp4_parser.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_parser.lo -MD -MP -MF .deps/ccp4_parser.Tpo -c ccp4_parser.c -fPIC -DPIC -o .libs/ccp4_parser.o In file included from /usr/include/string.h:494, from ccp4_parser.c:33: In function ‘strncpy’, inlined from ‘ccp4_parse_delimiters’ at ccp4_parser.c:260:2: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ccp4_parser.c: In function ‘ccp4_parse_delimiters’: ccp4_parser.c:252:16: note: length computed here 252 | ldelim = strlen(defdelim) + 1; | ^~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:494, from ccp4_parser.c:33: In function ‘strncpy’, inlined from ‘ccp4_parse_delimiters’ at ccp4_parser.c:277:2: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ccp4_parser.c: In function ‘ccp4_parse_delimiters’: ccp4_parser.c:269:20: note: length computed here 269 | lnulldelim = strlen(defnulldelim) + 1; | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:494, from ccp4_parser.c:33: In function ‘strncpy’, inlined from ‘ccp4_parse_comments’ at ccp4_parser.c:332:2: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ccp4_parser.c: In function ‘ccp4_parse_comments’: ccp4_parser.c:325:18: note: length computed here 325 | lcomment = strlen(def_comment_chars) + 1; | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:494, from ccp4_parser.c:33: In function ‘strncpy’, inlined from ‘ccp4_keymatch’ at ccp4_parser.c:1032:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:10: warning: ‘__builtin___strncpy_chk’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ccp4_parser.c: In function ‘ccp4_keymatch’: ccp4_parser.c:1021:10: note: length computed here 1021 | len1 = strlen(keyin1); | ^~~~~~~~~~~~~~ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_parser.lo -MD -MP -MF .deps/ccp4_parser.Tpo -c ccp4_parser.c -o ccp4_parser.o >/dev/null 2>&1 mv -f .deps/ccp4_parser.Tpo .deps/ccp4_parser.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_labels.lo -MD -MP -MF .deps/cmap_labels.Tpo -c -o cmap_labels.lo cmap_labels.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_labels.lo -MD -MP -MF .deps/cmap_labels.Tpo -c cmap_labels.c -fPIC -DPIC -o .libs/cmap_labels.o In file included from /usr/include/string.h:494, from cmap_labels.c:20: In function ‘strncpy’, inlined from ‘write_maplabels’ at cmap_labels.c:64:5: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:10: warning: ‘__builtin___strncpy_chk’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cmap_labels.c: In function ‘write_maplabels’: cmap_labels.c:64:5: note: length computed here 64 | strncpy(buffer,mfile->labels.labels[i],strlen(mfile->labels.labels[i])); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_labels.lo -MD -MP -MF .deps/cmap_labels.Tpo -c cmap_labels.c -o cmap_labels.o >/dev/null 2>&1 mv -f .deps/cmap_labels.Tpo .deps/cmap_labels.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cvecmat.lo -MD -MP -MF .deps/cvecmat.Tpo -c -o cvecmat.lo cvecmat.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cvecmat.lo -MD -MP -MF .deps/cvecmat.Tpo -c cvecmat.c -fPIC -DPIC -o .libs/cvecmat.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cvecmat.lo -MD -MP -MF .deps/cvecmat.Tpo -c cvecmat.c -o cvecmat.o >/dev/null 2>&1 mv -f .deps/cvecmat.Tpo .deps/cvecmat.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_program.lo -MD -MP -MF .deps/ccp4_program.Tpo -c -o ccp4_program.lo ccp4_program.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_program.lo -MD -MP -MF .deps/ccp4_program.Tpo -c ccp4_program.c -fPIC -DPIC -o .libs/ccp4_program.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_program.lo -MD -MP -MF .deps/ccp4_program.Tpo -c ccp4_program.c -o ccp4_program.o >/dev/null 2>&1 mv -f .deps/ccp4_program.Tpo .deps/ccp4_program.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_open.lo -MD -MP -MF .deps/cmap_open.Tpo -c -o cmap_open.lo cmap_open.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_open.lo -MD -MP -MF .deps/cmap_open.Tpo -c cmap_open.c -fPIC -DPIC -o .libs/cmap_open.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_open.lo -MD -MP -MF .deps/cmap_open.Tpo -c cmap_open.c -o cmap_open.o >/dev/null 2>&1 mv -f .deps/cmap_open.Tpo .deps/cmap_open.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT library_err.lo -MD -MP -MF .deps/library_err.Tpo -c -o library_err.lo library_err.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT library_err.lo -MD -MP -MF .deps/library_err.Tpo -c library_err.c -fPIC -DPIC -o .libs/library_err.o library_err.c: In function ‘CFile_Perror’: library_err.c:247:26: warning: comparison between pointer and zero character constant [-Wpointer-compare] 247 | if (msg == NULL || msg == '\0') colon = ""; | ^~ library_err.c:247:22: note: did you mean to dereference the pointer? 247 | if (msg == NULL || msg == '\0') colon = ""; | ^ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT library_err.lo -MD -MP -MF .deps/library_err.Tpo -c library_err.c -o library_err.o >/dev/null 2>&1 mv -f .deps/library_err.Tpo .deps/library_err.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_unitcell.lo -MD -MP -MF .deps/ccp4_unitcell.Tpo -c -o ccp4_unitcell.lo ccp4_unitcell.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_unitcell.lo -MD -MP -MF .deps/ccp4_unitcell.Tpo -c ccp4_unitcell.c -fPIC -DPIC -o .libs/ccp4_unitcell.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT ccp4_unitcell.lo -MD -MP -MF .deps/ccp4_unitcell.Tpo -c ccp4_unitcell.c -o ccp4_unitcell.o >/dev/null 2>&1 mv -f .deps/ccp4_unitcell.Tpo .deps/ccp4_unitcell.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_skew.lo -MD -MP -MF .deps/cmap_skew.Tpo -c -o cmap_skew.lo cmap_skew.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_skew.lo -MD -MP -MF .deps/cmap_skew.Tpo -c cmap_skew.c -fPIC -DPIC -o .libs/cmap_skew.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_skew.lo -MD -MP -MF .deps/cmap_skew.Tpo -c cmap_skew.c -o cmap_skew.o >/dev/null 2>&1 mv -f .deps/cmap_skew.Tpo .deps/cmap_skew.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT library_file.lo -MD -MP -MF .deps/library_file.Tpo -c -o library_file.lo library_file.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT library_file.lo -MD -MP -MF .deps/library_file.Tpo -c library_file.c -fPIC -DPIC -o .libs/library_file.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT library_file.lo -MD -MP -MF .deps/library_file.Tpo -c library_file.c -o library_file.o >/dev/null 2>&1 mv -f .deps/library_file.Tpo .deps/library_file.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_accessor.lo -MD -MP -MF .deps/cmap_accessor.Tpo -c -o cmap_accessor.lo cmap_accessor.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_accessor.lo -MD -MP -MF .deps/cmap_accessor.Tpo -c cmap_accessor.c -fPIC -DPIC -o .libs/cmap_accessor.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_accessor.lo -MD -MP -MF .deps/cmap_accessor.Tpo -c cmap_accessor.c -o cmap_accessor.o >/dev/null 2>&1 mv -f .deps/cmap_accessor.Tpo .deps/cmap_accessor.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_stats.lo -MD -MP -MF .deps/cmap_stats.Tpo -c -o cmap_stats.lo cmap_stats.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_stats.lo -MD -MP -MF .deps/cmap_stats.Tpo -c cmap_stats.c -fPIC -DPIC -o .libs/cmap_stats.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_stats.lo -MD -MP -MF .deps/cmap_stats.Tpo -c cmap_stats.c -o cmap_stats.o >/dev/null 2>&1 mv -f .deps/cmap_stats.Tpo .deps/cmap_stats.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT library_utils.lo -MD -MP -MF .deps/library_utils.Tpo -c -o library_utils.lo library_utils.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT library_utils.lo -MD -MP -MF .deps/library_utils.Tpo -c library_utils.c -fPIC -DPIC -o .libs/library_utils.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT library_utils.lo -MD -MP -MF .deps/library_utils.Tpo -c library_utils.c -o library_utils.o >/dev/null 2>&1 mv -f .deps/library_utils.Tpo .deps/library_utils.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_close.lo -MD -MP -MF .deps/cmap_close.Tpo -c -o cmap_close.lo cmap_close.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_close.lo -MD -MP -MF .deps/cmap_close.Tpo -c cmap_close.c -fPIC -DPIC -o .libs/cmap_close.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_close.lo -MD -MP -MF .deps/cmap_close.Tpo -c cmap_close.c -o cmap_close.o >/dev/null 2>&1 mv -f .deps/cmap_close.Tpo .deps/cmap_close.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_symop.lo -MD -MP -MF .deps/cmap_symop.Tpo -c -o cmap_symop.lo cmap_symop.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_symop.lo -MD -MP -MF .deps/cmap_symop.Tpo -c cmap_symop.c -fPIC -DPIC -o .libs/cmap_symop.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT cmap_symop.lo -MD -MP -MF .deps/cmap_symop.Tpo -c cmap_symop.c -o cmap_symop.o >/dev/null 2>&1 mv -f .deps/cmap_symop.Tpo .deps/cmap_symop.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT pack_c.lo -MD -MP -MF .deps/pack_c.Tpo -c -o pack_c.lo pack_c.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT pack_c.lo -MD -MP -MF .deps/pack_c.Tpo -c pack_c.c -fPIC -DPIC -o .libs/pack_c.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT pack_c.lo -MD -MP -MF .deps/pack_c.Tpo -c pack_c.c -o pack_c.o >/dev/null 2>&1 mv -f .deps/pack_c.Tpo .deps/pack_c.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT gpp4_open_symop_file.lo -MD -MP -MF .deps/gpp4_open_symop_file.Tpo -c -o gpp4_open_symop_file.lo gpp4_open_symop_file.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT gpp4_open_symop_file.lo -MD -MP -MF .deps/gpp4_open_symop_file.Tpo -c gpp4_open_symop_file.c -fPIC -DPIC -o .libs/gpp4_open_symop_file.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT gpp4_open_symop_file.lo -MD -MP -MF .deps/gpp4_open_symop_file.Tpo -c gpp4_open_symop_file.c -o gpp4_open_symop_file.o >/dev/null 2>&1 mv -f .deps/gpp4_open_symop_file.Tpo .deps/gpp4_open_symop_file.Plo /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 0:0:0 -Wl,-Bsymbolic-functions -Wl,-z,relro -o libgpp4.la -rpath /usr/lib ccp4_array.lo cmap_data.lo cmtzlib.lo ccp4_general.lo cmap_header.lo csymlib.lo ccp4_parser.lo cmap_labels.lo cvecmat.lo ccp4_program.lo cmap_open.lo library_err.lo ccp4_unitcell.lo cmap_skew.lo library_file.lo cmap_accessor.lo cmap_stats.lo library_utils.lo cmap_close.lo cmap_symop.lo pack_c.lo gpp4_open_symop_file.lo -lm libtool: link: gcc -shared -fPIC -DPIC .libs/ccp4_array.o .libs/cmap_data.o .libs/cmtzlib.o .libs/ccp4_general.o .libs/cmap_header.o .libs/csymlib.o .libs/ccp4_parser.o .libs/cmap_labels.o .libs/cvecmat.o .libs/ccp4_program.o .libs/cmap_open.o .libs/library_err.o .libs/ccp4_unitcell.o .libs/cmap_skew.o .libs/library_file.o .libs/cmap_accessor.o .libs/cmap_stats.o .libs/library_utils.o .libs/cmap_close.o .libs/cmap_symop.o .libs/pack_c.o .libs/gpp4_open_symop_file.o -lm -g -O2 -fstack-protector-strong -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-soname -Wl,libgpp4.so.0 -o .libs/libgpp4.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libgpp4.so.0" && ln -s "libgpp4.so.0.0.0" "libgpp4.so.0") libtool: link: (cd ".libs" && rm -f "libgpp4.so" && ln -s "libgpp4.so.0.0.0" "libgpp4.so") libtool: link: ar cru .libs/libgpp4.a ccp4_array.o cmap_data.o cmtzlib.o ccp4_general.o cmap_header.o csymlib.o ccp4_parser.o cmap_labels.o cvecmat.o ccp4_program.o cmap_open.o library_err.o ccp4_unitcell.o cmap_skew.o library_file.o cmap_accessor.o cmap_stats.o library_utils.o cmap_close.o cmap_symop.o pack_c.o gpp4_open_symop_file.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libgpp4.a libtool: link: ( cd ".libs" && rm -f "libgpp4.la" && ln -s "../libgpp4.la" "libgpp4.la" ) make[2]: Leaving directory '/<>/src' Making all in test make[2]: Entering directory '/<>/test' gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT load_syminfo.o -MD -MP -MF .deps/load_syminfo.Tpo -c -o load_syminfo.o load_syminfo.c mv -f .deps/load_syminfo.Tpo .deps/load_syminfo.Po /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security ../src/libgpp4.la -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -o load_syminfo load_syminfo.o -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/load_syminfo load_syminfo.o ../src/.libs/libgpp4.so -lm gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT mtzhdr.o -MD -MP -MF .deps/mtzhdr.Tpo -c -o mtzhdr.o mtzhdr.c mtzhdr.c: In function ‘mtzhdrout’: mtzhdr.c:103:31: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 8 [-Wformat-overflow=] 103 | sprintf (fmt, " %%-%ds", max); | ^~ mtzhdr.c:103:21: note: directive argument in the range [1, 2147483647] 103 | sprintf (fmt, " %%-%ds", max); | ^~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from ../src/ccp4_sysdep.h:136, from ../src/ccp4_types.h:30, from ../src/ccp4_utils.h:30, from ../src/cmtzlib.h:106, from mtzhdr.c:24: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 11 and 20 bytes into a destination of size 16 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mv -f .deps/mtzhdr.Tpo .deps/mtzhdr.Po /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security ../src/libgpp4.la -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -o mtzhdr mtzhdr.o -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/mtzhdr mtzhdr.o ../src/.libs/libgpp4.so -lm gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT checkarch.o -MD -MP -MF .deps/checkarch.Tpo -c -o checkarch.o checkarch.c mv -f .deps/checkarch.Tpo .deps/checkarch.Po /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security ../src/libgpp4.la -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -o checkarch checkarch.o -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/checkarch checkarch.o ../src/.libs/libgpp4.so -lm gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT maphdr.o -MD -MP -MF .deps/maphdr.Tpo -c -o maphdr.o maphdr.c mv -f .deps/maphdr.Tpo .deps/maphdr.Po /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security ../src/libgpp4.la -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -o maphdr maphdr.o -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/maphdr maphdr.o ../src/.libs/libgpp4.so -lm gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT mtzcols.o -MD -MP -MF .deps/mtzcols.Tpo -c -o mtzcols.o mtzcols.c mv -f .deps/mtzcols.Tpo .deps/mtzcols.Po /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security ../src/libgpp4.la -lm -Wl,-Bsymbolic-functions -Wl,-z,relro -o mtzcols mtzcols.o -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/mtzcols mtzcols.o ../src/.libs/libgpp4.so -lm make[2]: Leaving directory '/<>/test' Making all in data make[2]: Entering directory '/<>/data' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/<>/data' Making all in src_f make[2]: Entering directory '/<>/src_f' /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-ccp4_diskio_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_diskio_f.Tpo -c -o libgpp4f_la-ccp4_diskio_f.lo `test -f 'ccp4_diskio_f.c' || echo './'`ccp4_diskio_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-ccp4_diskio_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_diskio_f.Tpo -c ccp4_diskio_f.c -fPIC -DPIC -o .libs/libgpp4f_la-ccp4_diskio_f.o In file included from /usr/include/string.h:494, from ccp4_diskio_f.c:59: In function ‘strncpy’, inlined from ‘qqinq_’ at ccp4_diskio_f.c:719:5: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ../src/ccp4_utils.h:30, from ccp4_diskio_f.c:60: ccp4_diskio_f.c: In function ‘qqinq_’: ccp4_diskio_f.c:720:25: note: length computed here 720 | MIN(strlen(_ioChannels[*istrm]->iobj->name), ../src/ccp4_types.h:110:22: note: in definition of macro ‘MIN’ 110 | #define MIN(x, y) (((x)<(y))?(x):(y)) | ^ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-ccp4_diskio_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_diskio_f.Tpo -c ccp4_diskio_f.c -o libgpp4f_la-ccp4_diskio_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-ccp4_diskio_f.Tpo .deps/libgpp4f_la-ccp4_diskio_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-ccp4_parser_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_parser_f.Tpo -c -o libgpp4f_la-ccp4_parser_f.lo `test -f 'ccp4_parser_f.c' || echo './'`ccp4_parser_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-ccp4_parser_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_parser_f.Tpo -c ccp4_parser_f.c -fPIC -DPIC -o .libs/libgpp4f_la-ccp4_parser_f.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-ccp4_parser_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_parser_f.Tpo -c ccp4_parser_f.c -o libgpp4f_la-ccp4_parser_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-ccp4_parser_f.Tpo .deps/libgpp4f_la-ccp4_parser_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-cmaplib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmaplib_f.Tpo -c -o libgpp4f_la-cmaplib_f.lo `test -f 'cmaplib_f.c' || echo './'`cmaplib_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-cmaplib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmaplib_f.Tpo -c cmaplib_f.c -fPIC -DPIC -o .libs/libgpp4f_la-cmaplib_f.o In file included from /usr/include/string.h:494, from cmaplib_f.c:44: In function ‘strncpy’, inlined from ‘mrdhds_’ at cmaplib_f.c:705:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ../src/ccp4_utils.h:30, from ../src/cmaplib.h:53, from ../src/cmaplib_f.h:31, from cmaplib_f.c:47: cmaplib_f.c: In function ‘mrdhds_’: cmaplib_f.c:705:32: note: length computed here 705 | strncpy(title,temp_title,MIN(strlen(temp_title),FTN_LEN(title))); ../src/ccp4_types.h:110:22: note: in definition of macro ‘MIN’ 110 | #define MIN(x, y) (((x)<(y))?(x):(y)) | ^ In file included from /usr/include/string.h:494, from cmaplib_f.c:44: In function ‘strncpy’, inlined from ‘ccp4_map_read_open_header_’ at cmaplib_f.c:909:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ../src/ccp4_utils.h:30, from ../src/cmaplib.h:53, from ../src/cmaplib_f.h:31, from cmaplib_f.c:47: cmaplib_f.c: In function ‘ccp4_map_read_open_header_’: cmaplib_f.c:909:32: note: length computed here 909 | strncpy(title,temp_title,MIN(strlen(temp_title),FTN_LEN(title))); ../src/ccp4_types.h:110:22: note: in definition of macro ‘MIN’ 110 | #define MIN(x, y) (((x)<(y))?(x):(y)) | ^ In file included from /usr/include/string.h:494, from cmaplib_f.c:44: In function ‘strncpy’, inlined from ‘mwfnam_’ at cmaplib_f.c:2106:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ../src/ccp4_utils.h:30, from ../src/cmaplib.h:53, from ../src/cmaplib_f.h:31, from cmaplib_f.c:47: cmaplib_f.c: In function ‘mwfnam_’: cmaplib_f.c:2107:8: note: length computed here 2107 | MIN(strlen(ioArray[last_Write]->logname), ../src/ccp4_types.h:110:22: note: in definition of macro ‘MIN’ 110 | #define MIN(x, y) (((x)<(y))?(x):(y)) | ^ In file included from /usr/include/string.h:494, from cmaplib_f.c:44: In function ‘strncpy’, inlined from ‘mrfnam_’ at cmaplib_f.c:2134:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ../src/ccp4_utils.h:30, from ../src/cmaplib.h:53, from ../src/cmaplib_f.h:31, from cmaplib_f.c:47: cmaplib_f.c: In function ‘mrfnam_’: cmaplib_f.c:2135:8: note: length computed here 2135 | MIN(strlen(ioArray[last_Read]->logname), ../src/ccp4_types.h:110:22: note: in definition of macro ‘MIN’ 110 | #define MIN(x, y) (((x)<(y))?(x):(y)) | ^ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-cmaplib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmaplib_f.Tpo -c cmaplib_f.c -o libgpp4f_la-cmaplib_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-cmaplib_f.Tpo .deps/libgpp4f_la-cmaplib_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-csymlib_f.lo -MD -MP -MF .deps/libgpp4f_la-csymlib_f.Tpo -c -o libgpp4f_la-csymlib_f.lo `test -f 'csymlib_f.c' || echo './'`csymlib_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-csymlib_f.lo -MD -MP -MF .deps/libgpp4f_la-csymlib_f.Tpo -c csymlib_f.c -fPIC -DPIC -o .libs/libgpp4f_la-csymlib_f.o csymlib_f.c: In function ‘ccp4spg_f_equal_ops_order_’: csymlib_f.c:950:9: warning: implicit declaration of function ‘ccp4_spgrp_equal_order’; did you mean ‘ccp4_spgrp_equal’? [-Wimplicit-function-declaration] 950 | ret = ccp4_spgrp_equal_order(*msym1, op1, *msym2, op2); | ^~~~~~~~~~~~~~~~~~~~~~ | ccp4_spgrp_equal libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-csymlib_f.lo -MD -MP -MF .deps/libgpp4f_la-csymlib_f.Tpo -c csymlib_f.c -o libgpp4f_la-csymlib_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-csymlib_f.Tpo .deps/libgpp4f_la-csymlib_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-ccp4_general_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_general_f.Tpo -c -o libgpp4f_la-ccp4_general_f.lo `test -f 'ccp4_general_f.c' || echo './'`ccp4_general_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-ccp4_general_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_general_f.Tpo -c ccp4_general_f.c -fPIC -DPIC -o .libs/libgpp4f_la-ccp4_general_f.o In file included from ccp4_general_f.c:31: ccp4_general_f.c: In function ‘ccpfyp_’: ccp4_general_f.c:85:23: warning: implicit declaration of function ‘outbuf_’ [-Wimplicit-function-declaration] 85 | FORTRAN_CALL(OUTBUF,outbuf,(),(),()); | ^~~~~~ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ 194 | name##_ p_sun | ^~~~ ccp4_general_f.c:111:5: warning: implicit declaration of function ‘_gfortran_getarg_i4’; did you mean ‘_gfortran_getarg’? [-Wimplicit-function-declaration] 111 | _gfortran_getarg_i4(&i,arg,arg_len); | ^~~~~~~~~~~~~~~~~~~ | _gfortran_getarg In file included from ccp4_general_f.c:31: ccp4_general_f.c:142:29: warning: implicit declaration of function ‘ccp4h_init_’ [-Wimplicit-function-declaration] 142 | FORTRAN_CALL (CCP4H_INIT, ccp4h_init, (), (), ()); | ^~~~~~~~~~ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ 194 | name##_ p_sun | ^~~~ ccp4_general_f.c: In function ‘ccperr_’: ccp4_general_f.c:215:37: warning: implicit declaration of function ‘ccp4_fflush_stdout_’ [-Wimplicit-function-declaration] 215 | FORTRAN_CALL (CCP4_FFLUSH_STDOUT, ccp4_fflush_stdout, (), (), ()); | ^~~~~~~~~~~~~~~~~~ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ 194 | name##_ p_sun | ^~~~ ccp4_general_f.c:219:38: warning: implicit declaration of function ‘ccp4h_summary_beg_’ [-Wimplicit-function-declaration] 219 | FORTRAN_CALL (CCP4H_SUMMARY_BEG, ccp4h_summary_beg, (), (), ()); | ^~~~~~~~~~~~~~~~~ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ 194 | name##_ p_sun | ^~~~ ccp4_general_f.c:227:38: warning: implicit declaration of function ‘ccp4h_summary_end_’ [-Wimplicit-function-declaration] 227 | FORTRAN_CALL (CCP4H_SUMMARY_END, ccp4h_summary_end, (), (), ()); | ^~~~~~~~~~~~~~~~~ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ 194 | name##_ p_sun | ^~~~ ccp4_general_f.c: In function ‘ccpvrs_’: ccp4_general_f.c:373:32: warning: implicit declaration of function ‘ccp4h_pre_beg_’ [-Wimplicit-function-declaration] 373 | FORTRAN_CALL (CCP4H_PRE_BEG, ccp4h_pre_beg, (), (), ()); | ^~~~~~~~~~~~~ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ 194 | name##_ p_sun | ^~~~ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-ccp4_general_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_general_f.Tpo -c ccp4_general_f.c -o libgpp4f_la-ccp4_general_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-ccp4_general_f.Tpo .deps/libgpp4f_la-ccp4_general_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-ccp4_unitcell_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_unitcell_f.Tpo -c -o libgpp4f_la-ccp4_unitcell_f.lo `test -f 'ccp4_unitcell_f.c' || echo './'`ccp4_unitcell_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-ccp4_unitcell_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_unitcell_f.Tpo -c ccp4_unitcell_f.c -fPIC -DPIC -o .libs/libgpp4f_la-ccp4_unitcell_f.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-ccp4_unitcell_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_unitcell_f.Tpo -c ccp4_unitcell_f.c -o libgpp4f_la-ccp4_unitcell_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-ccp4_unitcell_f.Tpo .deps/libgpp4f_la-ccp4_unitcell_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-cmtzlib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmtzlib_f.Tpo -c -o libgpp4f_la-cmtzlib_f.lo `test -f 'cmtzlib_f.c' || echo './'`cmtzlib_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-cmtzlib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmtzlib_f.Tpo -c cmtzlib_f.c -fPIC -DPIC -o .libs/libgpp4f_la-cmtzlib_f.o In file included from cmtzlib_f.c:70: cmtzlib_f.c: In function ‘mtzini_’: cmtzlib_f.c:151:33: warning: implicit declaration of function ‘ccp4h_init_lib_’ [-Wimplicit-function-declaration] 151 | FORTRAN_CALL (CCP4H_INIT_LIB, ccp4h_init_lib, (&ihtml,&isumm), (&ihtml,&isumm), (&ihtml,&isumm)); | ^~~~~~~~~~~~~~ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ 194 | name##_ p_sun | ^~~~ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-cmtzlib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmtzlib_f.Tpo -c cmtzlib_f.c -o libgpp4f_la-cmtzlib_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-cmtzlib_f.Tpo .deps/libgpp4f_la-cmtzlib_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-library_f.lo -MD -MP -MF .deps/libgpp4f_la-library_f.Tpo -c -o libgpp4f_la-library_f.lo `test -f 'library_f.c' || echo './'`library_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-library_f.lo -MD -MP -MF .deps/libgpp4f_la-library_f.Tpo -c library_f.c -fPIC -DPIC -o .libs/libgpp4f_la-library_f.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../src -DGFORTRAN -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -MT libgpp4f_la-library_f.lo -MD -MP -MF .deps/libgpp4f_la-library_f.Tpo -c library_f.c -o libgpp4f_la-library_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-library_f.Tpo .deps/libgpp4f_la-library_f.Plo /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c -o ccplib.lo ccplib.f libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c ccplib.f -fPIC -o .libs/ccplib.o ccplib.f:1040:72: 1040 | 10 IARR1(J)=IARR2(J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) ccplib.f:1065:72: 1065 | 10 ARR1(J)=ARR2(J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) ccplib.f:1835:72: 1835 | 10 ARR1(J)=0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) ccplib.f:1857:72: 1857 | 10 IARR1(J)=0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) ccplib.f:1880:72: 1880 | 10 ARR1(J)=0.0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c ccplib.f -o ccplib.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c -o fftlib.lo fftlib.f libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c fftlib.f -fPIC -o .libs/fftlib.o fftlib.f:1253:72: 1253 | IF (K-I) 90,130,100 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c fftlib.f -o fftlib.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c -o modlib.lo modlib.f libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c modlib.f -fPIC -o .libs/modlib.o modlib.f:256:72: 256 | DO 100 I = 1, P | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1) modlib.f:258:72: 258 | DO 100 K = 1, R | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1) modlib.f:259:72: 259 | DO 100 J = 1, Q | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1) modlib.f:263:72: 263 | 100 D(I,L) = D(I,L) + A(I,J) * B(J,K) * C(K,L) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 100 at (1) modlib.f:913:18: 910 | DO 20 J = 2,M | 2 ...... 913 | A(I,J) = A(J,I) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) modlib.f:915:16: 910 | DO 20 J = 2,M | 2 ...... 915 | ALPHA(J) = A(J,J) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) modlib.f:915:25: 910 | DO 20 J = 2,M | 2 ...... 915 | ALPHA(J) = A(J,J) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) modlib.f:968:20: 967 | DO 120 I = 2,M | 2 968 | H = ALPHA(I) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) modlib.f:969:16: 967 | DO 120 I = 2,M | 2 968 | H = ALPHA(I) 969 | ALPHA(I) = A(I,I) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) modlib.f:969:25: 967 | DO 120 I = 2,M | 2 968 | H = ALPHA(I) 969 | ALPHA(I) = A(I,I) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) modlib.f:970:14: 967 | DO 120 I = 2,M | 2 ...... 970 | A(I,I) = H | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c modlib.f -o modlib.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c -o parser.lo parser.f libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c parser.f -fPIC -o .libs/parser.o libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c parser.f -o parser.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c -o rwbrook.lo rwbrook.f libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c rwbrook.f -fPIC -o .libs/rwbrook.o rwbrook.f:1628:72: 1628 | DO 10 J=1,4 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) rwbrook.f:1646:72: 1646 | DO 20 J=1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) rwbrook.f:2309:72: 2309 | DO 10 J=1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) rwbrook.f:2315:72: 2315 | DO 20 J=1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) rwbrook.f:2369:72: 2369 | 1 CELLD(I) = CELL(I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) rwbrook.f:2405:72: 2405 | 1 RCEL(I) = CELLAS(I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) rwbrook.f:2812:72: 2812 | DO 40 J = 1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 40 at (1) libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c rwbrook.f -o rwbrook.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c -o libhtml.lo libhtml.f libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c libhtml.f -fPIC -o .libs/libhtml.o libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c libhtml.f -o libhtml.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c -o keyparse.lo keyparse.f libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c keyparse.f -fPIC -o .libs/keyparse.o libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c keyparse.f -o keyparse.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c -o unix.lo unix.f libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c unix.f -fPIC -o .libs/unix.o libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c unix.f -o unix.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c -o dna_output.lo dna_output.f libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c dna_output.f -fPIC -o .libs/dna_output.o libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c dna_output.f -o dna_output.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c -o pack_f.lo pack_f.f libtool: compile: f77 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c pack_f.f -fPIC -o .libs/pack_f.o pack_f.f:108:28: 44 | call pack_wordimage_f(data, x, y, filnarray) | 2 ...... 108 | call pack_wordimage_f(data, x, y, filnarray) | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/INTEGER(2)). pack_f.f:140:30: 76 | call v2pack_wordimage_f(data, x, y, filnarray) | 2 ...... 140 | call v2pack_wordimage_f(data, x, y, filnarray) | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/INTEGER(2)). make[2]: *** [Makefile:561: pack_f.lo] Error 1 make[2]: Leaving directory '/<>/src_f' make[1]: *** [Makefile:471: all-recursive] Error 1 make[1]: Leaving directory '/<>' make: *** [debian/rules:25: build-arch-stamp] Error 2 dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 20200105-2114 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 17764 Build-Time: 51 Distribution: focal Fail-Stage: build Host Architecture: amd64 Install-Time: 19 Job: gpp4_1.3.1-0ubuntu9.dsc Machine Architecture: amd64 Package: gpp4 Package-Time: 70 Source-Version: 1.3.1-0ubuntu9 Space: 17764 Status: attempted Version: 1.3.1-0ubuntu9 -------------------------------------------------------------------------------- Finished at 20200105-2114 Build needed 00:01:10, 17764k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18389265 Scanning for processes to kill in build PACKAGEBUILD-18389265